Pregenerated sensors for TMEM253 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072571Ensembl transcript IDs: ENSMUST00000100638.4, ENSMUST00000227295.2, ENSMUST00000228408.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGACCCGGATCCAAGGGAGACCTGGAGCACAACCGACGCGGATTCTaGGTTGGCTGGTGCAGCAACCCGGCTTGGAGTGGATGGGATTGT | + |
Preference number: 1 (lower is better) Translates to: GPGSKGDLEHNRRGF*VGWCSNPAWSGWDC Trigger: ACAATCCCATCCACTCCAAGCCGGGTTGCTGCACCAGCCAACCCAGAATCCGCGTCGGTTGTGCTCCAGGTCTCCCTTGGATCCGGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR TCA 90 bp | GTAGGTCACGGGGTAGCGGGGCATCCTGGGATTTGTAGTCTCGGGTaGATTAGGCAGGACCCGGATCCAAGGGAGACCTGGAGCACAACC | + |
Preference number: 1 (lower is better) Translates to: VGHGVAGHPGICSLG*IRQDPDPRETWSTT Trigger: GGTTGTGCTCCAGGTCTCCCTTGGATCCGGGTCCTGCCTAATTCACCCGAGACTACAAATCCCAGGATGCCCCGCTACCCCGTGACCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR CCA 90 bp | GACGCAGAAGTGCCTGGAGATGTCCCCCTTGGCGTAGGGGGACAGTaGCACCTGTCTTGCCCACTCACTCATCCGTCCTATTTCCTGTGC | + |
Preference number: 1 (lower is better) Translates to: DAEVPGDVPLGVGGQ*HLSCPLTHPSYFLC Trigger: GCACAGGAAATAGGACGGATGAGTGAGTGGGCAAGACAGGTGCCACTGTCCCCCTACGCCAAGGGGGACATCTCCAGGCACTTCTGCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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3UTR GCA 90 bp | TGGAGAGGCAGGGAGGAAGAAGTCGAAGAATGCAAGGGAGGAAGCTaGTTGACGAGGCGTGAGGTGAGGGAGGTCTCTAGTCCAGAAATT | + |
Preference number: 1 (lower is better) Translates to: WRGREEEVEECKGGS*LTRREVREVSSPEI Trigger: AATTTCTGGACTAGAGACCTCCCTCACCTCACGCCTCGTCAAGCAGCTTCCTCCCTTGCATTCTTCGACTTCTTCCTCCCTGCCTCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR TCA 90 bp | AATTATCTCCCTCTAGTGGGGAAGAGAAGAGAAATGGGCCTGGGTTaGGGGGAAATTGAGGGCACTCTGGGCTTCAGGCACATTCTGGGG | + |
Preference number: 1 (lower is better) Translates to: NYLPLVGKRREMGLG*GEIEGTLGFRHILG Trigger: CCCCAGAATGTGCCTGAAGCCCAGAGTGCCCTCAATTTCCCCTCAACCCAGGCCCATTTCTCTTCTCTTCCCCACTAGAGGGAGATAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR CAA 90 bp | GCCTGGAGATGTCCCCCTTGGCGTAGGGGGACAGTGGCACCTGTCTaGCCCACTCACTCATCCGTCCTATTTCCTGTGCTAGCCACCACG | + |
Preference number: 2 (lower is better) Translates to: AWRCPPWRRGTVAPV*PTHSSVLFPVLATT Trigger: CGTGGTGGCTAGCACAGGAAATAGGACGGATGAGTGAGTGGGCAAGACAGGTGCCACTGTCCCCCTACGCCAAGGGGGACATCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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3UTR CAA 90 bp | CCGGATCCAAGGGAGACCTGGAGCACAACCGACGCGGATTCTGGGTaGGCTGGTGCAGCAACCCGGCTTGGAGTGGATGGGATTGTGAAA | + |
Preference number: 2 (lower is better) Translates to: PDPRETWSTTDADSG*AGAATRLGVDGIVK Trigger: TTTCACAATCCCATCCACTCCAAGCCGGGTTGCTGCACCAGCCAACCCAGAATCCGCGTCGGTTGTGCTCCAGGTCTCCCTTGGATCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR-3UTR TCA 90 bp | CCCGGATCCAAGGGAGACCTGGAGCACAACCGACGCGGATTCTGGGTTGGCTGGGTGAAAGGTGAACAGTaGGAGGAGGCAGATGTGAAA | + |
Preference number: 2 (lower is better) Translates to: PGSKGDLEHNRRGFWVGWVKGEQ*EEADVK Trigger: TTTCACATCTGCCTCCTCTCACTGTTCACCTTTCAC...CCAGCCAACCCAGAATCCGCGTCGGTTGTGCTCCAGGTCTCCCTTGGATCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR-3UTR TCA 90 bp | TCTGGGTTGGCTGGTGCAGCAACCCGGCTTGGAGTGGATGGGATTGTGAAAGGTGAAATGGGCCTGGGTTaGGGGGAAATTGAGGGCACT | + |
Preference number: 2 (lower is better) Translates to: SGLAGAATRLGVDGIVKGEMGLG*GEIEGT Trigger: AGTGCCCTCAATTTCCCCTCAACCCAGGCCCATTTC...ACCTTTCACAATCCCATCCACTCCAAGCCGGGTTGCTGCACCAGCCAACCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR-3UTR TCA 90 bp | TTCTGGGTTGGCTGGTGCAGCAACCCGGCTTGGAGTGGATGGGATTGTGAAAGGGAGGCAGATGTGAAATaGAGCTGGATGGAGAGGCAG | + |
Preference number: 2 (lower is better) Translates to: FWVGWCSNPAWSGWDCEREADVK*SWMERQ Trigger: CTGCCTCTCCATCCAGCTTCATTTCACATCTGCCTC...CCTTTCACAATCCCATCCACTCCAAGCCGGGTTGCTGCACCAGCCAACCCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR-3UTR CCA 90 bp | GAGGAAGAAGTCGAAGAATGCAAGGGAGGAAGCTGCTTGACGAGGCGTGAGGTGGAAGAGAAATGGGCCTaGGTTGAGGGGAAATTGAGG | + |
Preference number: 2 (lower is better) Translates to: EEEVEECKGGSCLTRREVEEKWA*VEGKLR Trigger: CCTCAATTTCCCCTCAACCCAGGCCCATTTCTCTTC...CACCTCACGCCTCGTCAAGCAGCTTCCTCCCTTGCATTCTTCGACTTCTTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR-3UTR CCA 90 bp | ACAGTGAGAGGAGGCAGATGTGAAATGAAGCTGGATGGAGAGGCAGGGAGGAAGGCTTCAGGCACATTCTaGGGGAAGTCCAGTTATAGT | + |
Preference number: 2 (lower is better) Translates to: TVRGGRCEMKLDGEAGRKASGTF*GKSSYS Trigger: ACTATAACTGGACTTCCCCCAGAATGTGCCTGAAGC...CTTCCTCCCTGCCTCTCCATCCAGCTTCATTTCACATCTGCCTCCTCTCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR-3UTR CCA 90 bp | TACCTTCATGTTTTCCCCAAAGGTAAAGGCAAGCTACTTGGAAATGAAGGGTTTCCCCAGCACAGTTTCTaGTGCATGGTTTGTGCTCAC | + |
Preference number: 2 (lower is better) Translates to: YLHVFPKGKGKLLGNEGFPQHSF*CMVCAH Trigger: GTGAGCACAAACCATGCACCAGAAACTGTGCTGGGG...AAACCCTTCATTTCCAAGTAGCTTGCCTTTACCTTTGGGGAAAACATGAAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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3UTR-3UTR GCA 90 bp | GGCAAGCTACTTGGAAATGAAGGGTTTTGCTTTGTTAATTTGTACATTTCTTTCCTGGTGCATGGTTTGTaGTCACTGAACATGAGTGGA | + |
Preference number: 2 (lower is better) Translates to: GKLLGNEGFCFVNLYISFLVHGL*SLNMSG Trigger: TCCACTCATGTTCAGTGAGCACAAACCATGCACCAG...GAAAGAAATGTACAAATTAACAAAGCAAAACCCTTCATTTCCAAGTAGCTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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3UTR GCA 72 bp | CTGGAGCACAACCGACGCGGATTCTGGGTTGGCTGGTaGAGCAACCCGGCTTGGAGTGGATGGGATTGTGAA | + |
Preference number: 3 (lower is better) Translates to: LEHNRRGFWVGW*SNPAWSGWDCE Trigger: TTCACAATCCCATCCACTCCAAGCCGGGTTGCTGCACCAGCCAACCCAGAATCCGCGTCGGTTGTGCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR GCA 72 bp | CATTCTGGGGGAAGTCCAGTTATAGTCCAAGGGAGGTaGAAGACGCAGAAGTGCCTGGAGATGTCCCCCTTG | + |
Preference number: 3 (lower is better) Translates to: HSGGSPVIVQGR*KTQKCLEMSPL Trigger: CAAGGGGGACATCTCCAGGCACTTCTGCGTCTTGCACCTCCCTTGGACTATAACTGGACTTCCCCCAGAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR GCA 72 bp | AGGGAGGAAGAAGTCGAAGAATGCAAGGGAGGAAGCTaGTTGACGAGGCGTGAGGTGAGGGAGGTCTCTAGT | + |
Preference number: 3 (lower is better) Translates to: REEEVEECKGGS*LTRREVREVSS Trigger: ACTAGAGACCTCCCTCACCTCACGCCTCGTCAAGCAGCTTCCTCCCTTGCATTCTTCGACTTCTTCCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR CCA 72 bp | GGGAAATTGAGGGCACTCTGGGCTTCAGGCACATTCTaGGGGAAGTCCAGTTATAGTCCAAGGGAGGTGCAA | + |
Preference number: 3 (lower is better) Translates to: GKLRALWASGTF*GKSSYSPREVQ Trigger: TTGCACCTCCCTTGGACTATAACTGGACTTCCCCCAGAATGTGCCTGAAGCCCAGAGTGCCCTCAATTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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3UTR-3UTR CAA 90 bp | TATAGTTCGCTTACCTTCATGTTTTCCCCAAAGGTAAAGGCAAGCTACTTGGAATTTCTGGTGCATGGTTaGTGCTCACTGAACATGAGT | + |
Preference number: 3 (lower is better) Translates to: YSSLTFMFSPKVKASYLEFLVHG*CSLNMS Trigger: ACTCATGTTCAGTGAGCACAAACCATGCACCAGAAA...TTCCAAGTAGCTTGCCTTTACCTTTGGGGAAAACATGAAGGTAAGCGAACTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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CDS-3UTR TCA 90 bp | GACGCAGAAGTGCCTGGAGATGTCCCCCTTGGCGTAGGGGGACAGTGGCACCTGGCAGCCTTGACCTCTTaGAGTATCCAGGCTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: DAEVPGDVPLGVGGQWHLAALTS*SIQASS Trigger: AGAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGC...CAGGTGCCACTGTCCCCCTACGCCAAGGGGGACATCTCCAGGCACTTCTGCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS-3UTR TCA 90 bp | GAAGTGCCTGGAGATGTCCCCCTTGGCGTAGGGGGACAGTGGCACCTGTCTTGCCCGGTACTGCAGCCTTaGCCTCTTGAAGTATCCAGG | + |
Preference number: 4 (lower is better) Translates to: EVPGDVPLGVGGQWHLSCPVLQP*PLEVSR Trigger: CCTGGATACTTCAAGAGGTCAAGGCTGCAGTACCGG...GCAAGACAGGTGCCACTGTCCCCCTACGCCAAGGGGGACATCTCCAGGCACTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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3UTR CAA 72 bp | TGTCCCCCTTGGCGTAGGGGGACAGTGGCACCTGTCTaGCCCACTCACTCATCCGTCCTATTTCCTGTGCTA | + |
Preference number: 4 (lower is better) Translates to: CPPWRRGTVAPV*PTHSSVLFPVL Trigger: TAGCACAGGAAATAGGACGGATGAGTGAGTGGGCAAGACAGGTGCCACTGTCCCCCTACGCCAAGGGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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CDS-3UTR GCA 90 bp | CTATTTCCTGTGCTAGCCACCACGGGACCATTCTCCAAACCAGAAACCTCCTCCGGGCCAAAGTGGCAGTaGTGTGACCAGGTGACAGGC | + |
Preference number: 4 (lower is better) Translates to: LFPVLATTGPFSKPETSSGPKWQ*CDQVTG Trigger: GCCTGTCACCTGGTCACAGCACTGCCACTTTGGCCC...GGAGGAGGTTTCTGGTTTGGAGAATGGTCCCGTGGTGGCTAGCACAGGAAATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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3UTR CAA 72 bp | GGAAGAGAAGAGAAATGGGCCTGGGTTGAGGGGAAATaGAGGGCACTCTGGGCTTCAGGCACATTCTGGGGG | + |
Preference number: 4 (lower is better) Translates to: GREEKWAWVEGK*RALWASGTFWG Trigger: CCCCCAGAATGTGCCTGAAGCCCAGAGTGCCCTCAATTTCCCCTCAACCCAGGCCCATTTCTCTTCTCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR TCA 90 bp | AAGGGAGACCTGGAGCACAACCGACGCGGATTCTGGGTTGGCTGGTGCAGCAACGGTCAAGCAGGAAACTaGGATAGTAAAGGGGACCAT | + |
Preference number: 4 (lower is better) Translates to: KGDLEHNRRGFWVGWCSNGQAGN*DSKGDH Trigger: ATGGTCCCCTTTACTATCTCAGTTTCCTGCTTGACC...GTTGCTGCACCAGCCAACCCAGAATCCGCGTCGGTTGTGCTCCAGGTCTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR TCA 90 bp | GAGGAAGAAGTCGAAGAATGCAAGGGAGGAAGCTGCTTGACGAGGCGTGAGGTGCCGGTACTGCAGCCTTaGCCTCTTGAAGTATCCAGG | + |
Preference number: 4 (lower is better) Translates to: EEEVEECKGGSCLTRREVPVLQP*PLEVSR Trigger: CCTGGATACTTCAAGAGGTCAAGGCTGCAGTACCGG...CACCTCACGCCTCGTCAAGCAGCTTCCTCCCTTGCATTCTTCGACTTCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR GCA 90 bp | ACATTCTGGGGGAAGTCCAGTTATAGTCCAAGGGAGGTGCAAGACGCAGAAGTGGGGCCAAAGTGGCAGTaGTGTGACCAGGTGACAGGC | + |
Preference number: 4 (lower is better) Translates to: TFWGKSSYSPREVQDAEVGPKWQ*CDQVTG Trigger: GCCTGTCACCTGGTCACAGCACTGCCACTTTGGCCC...CACTTCTGCGTCTTGCACCTCCCTTGGACTATAACTGGACTTCCCCCAGAATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR CCA 90 bp | GAAGTGCCTGGAGATGTCCCCCTTGGCGTAGGGGGACAGTGGCACCTGTCTTGCGGGTCTCTCCTGTCTTaGCTGATTAGCATTTTGATC | + |
Preference number: 4 (lower is better) Translates to: EVPGDVPLGVGGQWHLSCGSLLS*LISILI Trigger: GATCAAAATGCTAATCAGCCAAGACAGGAGAGACCC...GCAAGACAGGTGCCACTGTCCCCCTACGCCAAGGGGGACATCTCCAGGCACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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3UTR CAA 72 bp | GAGGAAGAAGTCGAAGAATGCAAGGGAGGAAGCTGCTaGACGAGGCGTGAGGTGAGGGAGGTCTCTAGTCCA | + |
Preference number: 4 (lower is better) Translates to: EEEVEECKGGSC*TRREVREVSSP Trigger: TGGACTAGAGACCTCCCTCACCTCACGCCTCGTCAAGCAGCTTCCTCCCTTGCATTCTTCGACTTCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR TCA 90 bp | GGGAAGTCCAGTTATAGTCCAAGGGAGGTGCAAGACGCAGAAGTGCCTGGAGATGCAGCCTTGACCTCTTaGAGTATCCAGGCTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: GKSSYSPREVQDAEVPGDAALTS*SIQASS Trigger: AGAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGC...ATCTCCAGGCACTTCTGCGTCTTGCACCTCCCTTGGACTATAACTGGACTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR GCA 90 bp | CTATTTCCTGTGCTAGCCACCACGGGACCATTCTCCAAACCAGAAACCTCCTCCGCCCCTGTTTTCTTCTaGCCTTCCGCCTTCATTTAC | + |
Preference number: 4 (lower is better) Translates to: LFPVLATTGPFSKPETSSAPVFF*PSAFIY Trigger: GTAAATGAAGGCGGAAGGGCAGAAGAAAACAGGGGC...GGAGGAGGTTTCTGGTTTGGAGAATGGTCCCGTGGTGGCTAGCACAGGAAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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CDS-3UTR TCA 90 bp | CCTATTTCCTGTGCTAGCCACCACGGGACCATTCTCCAAACCAGAAACCTCCTCGGTCAAGCAGGAAACTaGGATAGTAAAGGGGACCAT | + |
Preference number: 4 (lower is better) Translates to: PISCASHHGTILQTRNLLGQAGN*DSKGDH Trigger: ATGGTCCCCTTTACTATCTCAGTTTCCTGCTTGACC...GAGGAGGTTTCTGGTTTGGAGAATGGTCCCGTGGTGGCTAGCACAGGAAATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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CDS-3UTR TCA 90 bp | GCACATTCTGGGGGAAGTCCAGTTATAGTCCAAGGGAGGTGCAAGACGCAGAAGAGCCCAAGATCAGGTTaGAGGTGTTGGATATCATCA | + |
Preference number: 4 (lower is better) Translates to: AHSGGSPVIVQGRCKTQKSPRSG*RCWISS Trigger: TGATGATATCCAACACCTTCAACCTGATCTTGGGCT...CTTCTGCGTCTTGCACCTCCCTTGGACTATAACTGGACTTCCCCCAGAATGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR CCA 90 bp | AGTTATAGTCCAAGGGAGGTGCAAGACGCAGAAGTGCCTGGAGATGTCCCCCTTGGGTCTCTCCTGTCTTaGCTGATTAGCATTTTGATC | + |
Preference number: 4 (lower is better) Translates to: SYSPREVQDAEVPGDVPLGSLLS*LISILI Trigger: GATCAAAATGCTAATCAGCCAAGACAGGAGAGACCC...AAGGGGGACATCTCCAGGCACTTCTGCGTCTTGCACCTCCCTTGGACTATAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR CCA 90 bp | AAGGTAAAGGCAAGCTACTTGGAAATGAAGGGTTTTGCTTTGTTAATTTGTACAGGGTCTCTCCTGTCTTaGCTGATTAGCATTTTGATC | + |
Preference number: 4 (lower is better) Translates to: KVKASYLEMKGFALLICTGSLLS*LISILI Trigger: GATCAAAATGCTAATCAGCCAAGACAGGAGAGACCC...TGTACAAATTAACAAAGCAAAACCCTTCATTTCCAAGTAGCTTGCCTTTACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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CDS GCA 90 bp | GCGGGGCAACCTGGCCTCACCGCCAGCACCAGTAGGCGTCCACTTTaGTTGTGTCTTGCCCAGTGCTGTAGCTTTTCCAGGCGAACGCTG | + |
Preference number: 5 (lower is better) Translates to: AGQPGLTASTSRRPL*LCLAQCCSFSRRTL Trigger: CAGCGTTCGCCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGGCCAGGTTGCCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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CDS TCA 90 bp | TCAGCAAGAACAGGGCATATGTGGAGACCAGCACTCCCGCTAGGGTaGAGGCCTCCGCGCTCAGCTCCAGCACCAGCAACCCTGTCGACT | + |
Preference number: 5 (lower is better) Translates to: SARTGHMWRPALPLG*RPPRSAPAPATLST Trigger: AGTCGACAGGGTTGCTGGTGCTGGAGCTGAGCGCGGAGGCCTTCACCCTAGCGGGAGTGCTGGTCTCCACATATGCCCTGTTCTTGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS GCA 90 bp | GCCAGCCACACTTGGCTCACCGCCAGCACCAGTAGGCGTCCACTTTaGTTGTGTCTTGCCCAGTGCTGTAGCTTTTCCAGGCGAACGCTG | + |
Preference number: 5 (lower is better) Translates to: ASHTWLTASTSRRPL*LCLAQCCSFSRRTL Trigger: CAGCGTTCGCCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGCCAAGTGTGGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS CCA 90 bp | AAGGGTGATAATGCCAGTGAGGAGGCCCGAGGCTCCGGGCCAAAGTaGCAGTGCTGTGACCAGGTGACAGGCAGAGGTCAAGCAGGAAAC | + |
Preference number: 5 (lower is better) Translates to: KGDNASEEARGSGPK*QCCDQVTGRGQAGN Trigger: GTTTCCTGCTTGACCTCTGCCTGTCACCTGGTCACAGCACTGCCACTTTGGCCCGGAGCCTCGGGCCTCCTCACTGGCATTATCACCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS-3UTR CAA 90 bp | CCCGGATCCAAGGGAGACCTGGAGCACAACCGACGCGGATTCTGGGTTGGCTGGTGCAGCCTTGACCTCTaGAAGTATCCAGGCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: PGSKGDLEHNRRGFWVGWCSLDL*KYPGFL Trigger: GAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGCA...CCAGCCAACCCAGAATCCGCGTCGGTTGTGCTCCAGGTCTCCCTTGGATCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR CAA 90 bp | GGAGCACAACCGACGCGGATTCTGGGTTGGCTGGTGCAGCAACCCGGCTTGGAGATCAGGTTGAAGGTGTaGGATATCATCATGGCCCGC | + |
Preference number: 5 (lower is better) Translates to: GAQPTRILGWLVQQPGLEIRLKV*DIIMAR Trigger: GCGGGCCATGATGATATCCAACACCTTCAACCTGAT...CTCCAAGCCGGGTTGCTGCACCAGCCAACCCAGAATCCGCGTCGGTTGTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS GCA 90 bp | GAAACCTCCTCCATCTCAGAGAGGCCCTCCTGTAGCTCCCGGTACTaGAGCCTTGACCTCTTGAAGTATCCAGGCTTCCTCTGGCTCAGC | + |
Preference number: 5 (lower is better) Translates to: ETSSISERPSCSSRY*SLDLLKYPGFLWLS Trigger: GCTGAGCCAGAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGCAGTACCGGGAGCTACAGGAGGGCCTCTCTGAGATGGAGGAGGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR CAA 90 bp | GGAGGTGCAAGACGCAGAAGTGCCTGGAGATGTCCCCCTTGGCGTAGGGGGACACACTTTGCTTGTGTCTaGCCCAGTGCTGTAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: GGARRRSAWRCPPWRRGTHFACV*PSAVAF Trigger: AAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTG...TGTCCCCCTACGCCAAGGGGGACATCTCCAGGCACTTCTGCGTCTTGCACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS TCA 90 bp | TGGCAGTGCTGTGACCAGGTGACAGGCAGAGGTCAAGCAGGAAACTaGGATAGTAAAGGGGACCATAGCTATTGCCAGCCACACTTGGCT | + |
Preference number: 5 (lower is better) Translates to: WQCCDQVTGRGQAGN*DSKGDHSYCQPHLA Trigger: AGCCAAGTGTGGCTGGCAATAGCTATGGTCCCCTTTACTATCTCAGTTTCCTGCTTGACCTCTGCCTGTCACCTGGTCACAGCACTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS GCA 90 bp | TTCTGCCCTTCCGCCTTCATTTACCAGTACCTTCCAGATGCAAGGTaGTCTTCGGAGTTCAAGGGTGATAATGCCAGTGAGGAGGCCCGA | + |
Preference number: 5 (lower is better) Translates to: FCPSAFIYQYLPDAR*SSEFKGDNASEEAR Trigger: TCGGGCCTCCTCACTGGCATTATCACCCTTGAACTCCGAAGAGCACCTTGCATCTGGAAGGTACTGGTAAATGAAGGCGGAAGGGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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CDS-3UTR CAA 90 bp | TTTCCTGTGCTAGCCACCACGGGACCATTCTCCAAACCAGAAACCTCCTCCATCTGCAGCCTTGACCTCTaGAAGTATCCAGGCTTCCTC | + |
Preference number: 5 (lower is better) Translates to: FPVLATTGPFSKPETSSICSLDL*KYPGFL Trigger: GAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGCA...GATGGAGGAGGTTTCTGGTTTGGAGAATGGTCCCGTGGTGGCTAGCACAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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CDS CCA 90 bp | GAAACTGAGATAGTAAAGGGGACCATAGCTATTGCCAGCCACACTTaGCTCACCGCCAGCACCAGTAGGCGTCCACTTTGCTTGTGTCTT | + |
Preference number: 5 (lower is better) Translates to: ETEIVKGTIAIASHT*LTASTSRRPLCLCL Trigger: AAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGCCAAGTGTGGCTGGCAATAGCTATGGTCCCCTTTACTATCTCAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS-3UTR CAA 90 bp | TTCTGGGTTGGCTGGTGCAGCAACCCGGCTTGGAGTGGATGGGATTGTGAAAGGAAGCCCAAGATCAGGTaGAAGGTGTTGGATATCATC | + |
Preference number: 5 (lower is better) Translates to: FWVGWCSNPAWSGWDCERKPKIR*KVLDII Trigger: GATGATATCCAACACCTTCAACCTGATCTTGGGCTT...CCTTTCACAATCCCATCCACTCCAAGCCGGGTTGCTGCACCAGCCAACCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS TCA 90 bp | TCTTCATCACCTCTATCACCACCGCAACGAAGCCCAAGATCAGGTTaGAGGTGTTGGATATCATCATGGCCCGCACCTTCCAGATGCAAG | + |
Preference number: 5 (lower is better) Translates to: SSSPLSPPQRSPRSG*RCWISSWPAPSRCK Trigger: CTTGCATCTGGAAGGTGCGGGCCATGATGATATCCAACACCTTCAACCTGATCTTGGGCTTCGTTGCGGTGGTGATAGAGGTGATGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS-3UTR CAA 90 bp | ATTTCCTGTGCTAGCCACCACGGGACCATTCTCCAAACCAGAAACCTCCTCCATCACTTTGCTTGTGTCTaGCCCAGTGCTGTAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: ISCASHHGTILQTRNLLHHFACV*PSAVAF Trigger: AAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTG...ATGGAGGAGGTTTCTGGTTTGGAGAATGGTCCCGTGGTGGCTAGCACAGGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |
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CDS-3UTR CAA 90 bp | TTCGCTTACCTTCATGTTTTCCCCAAAGGTAAAGGCAAGCTACTTGGAAATGAACACTTTGCTTGTGTCTaGCCCAGTGCTGTAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: FAYLHVFPKGKGKLLGNEHFACV*PSAVAF Trigger: AAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTG...TTCATTTCCAAGTAGCTTGCCTTTACCTTTGGGGAAAACATGAAGGTAAGCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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CDS TCA 72 bp | ACAGGGCATATGTGGAGACCAGCACTCCCGCTAGGGTaGAGGCCTCCGCGCTCAGCTCCAGCACCAGCAACC | + |
Preference number: 6 (lower is better) Translates to: TGHMWRPALPLG*RPPRSAPAPAT Trigger: GGTTGCTGGTGCTGGAGCTGAGCGCGGAGGCCTTCACCCTAGCGGGAGTGCTGGTCTCCACATATGCCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS CCA 72 bp | TCCGCGCTCAGCTCCAGCACCAGCAACCCTGTCGACTaGGAGGAGTCCATAGAGGCAGTTCCCAAGGCTGTC | + |
Preference number: 6 (lower is better) Translates to: SALSSSTSNPVD*EESIEAVPKAV Trigger: GACAGCCTTGGGAACTGCCTCTATGGACTCCTCCCAGTCGACAGGGTTGCTGGTGCTGGAGCTGAGCGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS CAA 90 bp | GGGCAACCTGGCCTCACCGCCAGCACCAGTAGGCGTCCACTTTGCTaGTGTCTTGCCCAGTGCTGTAGCTTTTCCAGGCGAACGCTGGGT | + |
Preference number: 6 (lower is better) Translates to: GQPGLTASTSRRPLC*CLAQCCSFSRRTLG Trigger: ACCCAGCGTTCGCCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGGCCAGGTTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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CDS CAA 90 bp | CTGGCCTCACCGCCAGCACCAGTAGGCGTCCACTTTGCTTGTGTCTaGCCCAGTGCTGTAGCTTTTCCAGGCGAACGCTGGGTCTCTCCT | + |
Preference number: 6 (lower is better) Translates to: LASPPAPVGVHFACV*PSAVAFPGERWVSP Trigger: AGGAGAGACCCAGCGTTCGCCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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CDS GCA 72 bp | CCTGGCCTCACCGCCAGCACCAGTAGGCGTCCACTTTaGTTGTGTCTTGCCCAGTGCTGTAGCTTTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: PGLTASTSRRPL*LCLAQCCSFSR Trigger: CCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228408.2 |
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CDS CAA 72 bp | CCGCCAGCACCAGTAGGCGTCCACTTTGCTTGTGTCTaGCCCAGTGCTGTAGCTTTTCCAGGCGAACGCTGG | + |
Preference number: 6 (lower is better) Translates to: PPAPVGVHFACV*PSAVAFPGERW Trigger: CCAGCGTTCGCCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 ENSMUST00000228408.2 |
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CDS CAA 90 bp | CTTGGCTCACCGCCAGCACCAGTAGGCGTCCACTTTGCTTGTGTCTaGCCCAGTGCTGTAGCTTTTCCAGGCGAACGCTGGGTCTCTCCT | + |
Preference number: 6 (lower is better) Translates to: LGSPPAPVGVHFACV*PSAVAFPGERWVSP Trigger: AGGAGAGACCCAGCGTTCGCCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS CAA 90 bp | AGCCACACTTGGCTCACCGCCAGCACCAGTAGGCGTCCACTTTGCTaGTGTCTTGCCCAGTGCTGTAGCTTTTCCAGGCGAACGCTGGGT | + |
Preference number: 6 (lower is better) Translates to: SHTWLTASTSRRPLC*CLAQCCSFSRRTLG Trigger: ACCCAGCGTTCGCCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGCCAAGTGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS GCA 72 bp | ACTTGGCTCACCGCCAGCACCAGTAGGCGTCCACTTTaGTTGTGTCTTGCCCAGTGCTGTAGCTTTTCCAGG | + |
Preference number: 6 (lower is better) Translates to: TWLTASTSRRPL*LCLAQCCSFSR Trigger: CCTGGAAAAGCTACAGCACTGGGCAAGACACAAGCAAAGTGGACGCCTACTGGTGCTGGCGGTGAGCCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS GCA 72 bp | TCCATCTCAGAGAGGCCCTCCTGTAGCTCCCGGTACTaGAGCCTTGACCTCTTGAAGTATCCAGGCTTCCTC | + |
Preference number: 6 (lower is better) Translates to: SISERPSCSSRY*SLDLLKYPGFL Trigger: GAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGCAGTACCGGGAGCTACAGGAGGGCCTCTCTGAGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS CAA 72 bp | CCCTCCTGTAGCTCCCGGTACTGCAGCCTTGACCTCTaGAAGTATCCAGGCTTCCTCTGGCTCAGCAAGAAC | + |
Preference number: 6 (lower is better) Translates to: PSCSSRYCSLDL*KYPGFLWLSKN Trigger: GTTCTTGCTGAGCCAGAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGCAGTACCGGGAGCTACAGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS CAA 90 bp | TCAGAGAGGCCCTCCTGTAGCTCCCGGTACTGCAGCCTTGACCTCTaGAAGTATCCAGGCTTCCTCTGGCTCAGCAAGAACAGGGCATAT | + |
Preference number: 6 (lower is better) Translates to: SERPSCSSRYCSLDL*KYPGFLWLSKNRAY Trigger: ATATGCCCTGTTCTTGCTGAGCCAGAGGAAGCCTGGATACTTCAAGAGGTCAAGGCTGCAGTACCGGGAGCTACAGGAGGGCCTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100638.4 ENSMUST00000227295.2 |
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CDS TCA 72 bp | CCTCTATCACCACCGCAACGAAGCCCAAGATCAGGTTaGAGGTGTTGGATATCATCATGGCCCGCACCTTCC | + |
Preference number: 6 (lower is better) Translates to: PLSPPQRSPRSG*RCWISSWPAPS Trigger: GGAAGGTGCGGGCCATGATGATATCCAACACCTTCAACCTGATCTTGGGCTTCGTTGCGGTGGTGATAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS GCA 72 bp | GGATATCATCATGGCCCGCACCTTCCAGATGCAAGGTaGTCTTCGGAGTTCAAGGGTGATAATGCCAGTGAG | + |
Preference number: 6 (lower is better) Translates to: GYHHGPHLPDAR*SSEFKGDNASE Trigger: CTCACTGGCATTATCACCCTTGAACTCCGAAGAGCACCTTGCATCTGGAAGGTGCGGGCCATGATGATATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS CAA 72 bp | ACCACCGCAACGAAGCCCAAGATCAGGTTGAAGGTGTaGGATATCATCATGGCCCGCACCTTCCAGATGCAA | + |
Preference number: 6 (lower is better) Translates to: TTATKPKIRLKV*DIIMARTFQMQ Trigger: TTGCATCTGGAAGGTGCGGGCCATGATGATATCCAACACCTTCAACCTGATCTTGGGCTTCGTTGCGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS CAA 72 bp | ACCTCTATCACCACCGCAACGAAGCCCAAGATCAGGTaGAAGGTGTTGGATATCATCATGGCCCGCACCTTC | + |
Preference number: 6 (lower is better) Translates to: TSITTATKPKIR*KVLDIIMARTF Trigger: GAAGGTGCGGGCCATGATGATATCCAACACCTTCAACCTGATCTTGGGCTTCGTTGCGGTGGTGATAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS CAA 90 bp | ACCTCTATCACCACCGCAACGAAGCCCAAGATCAGGTTGAAGGTGTaGGATATCATCATGGCCCGCACCTTCCAGATGCAAGGTGCTCTT | + |
Preference number: 6 (lower is better) Translates to: TSITTATKPKIRLKV*DIIMARTFQMQGAL Trigger: AAGAGCACCTTGCATCTGGAAGGTGCGGGCCATGATGATATCCAACACCTTCAACCTGATCTTGGGCTTCGTTGCGGTGGTGATAGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS CAA 90 bp | GTCTTCATCACCTCTATCACCACCGCAACGAAGCCCAAGATCAGGTaGAAGGTGTTGGATATCATCATGGCCCGCACCTTCCAGATGCAA | + |
Preference number: 6 (lower is better) Translates to: VFITSITTATKPKIR*KVLDIIMARTFQMQ Trigger: TTGCATCTGGAAGGTGCGGGCCATGATGATATCCAACACCTTCAACCTGATCTTGGGCTTCGTTGCGGTGGTGATAGAGGTGATGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100638.4 |
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CDS GCA 72 bp | TCCGCCTTCATTTACCAGTACCTTCCAGATGCAAGGTaGTCTTCGGAGTTCAAGGGTGATAATGCCAGTGAG | + |
Preference number: 6 (lower is better) Translates to: SAFIYQYLPDAR*SSEFKGDNASE Trigger: CTCACTGGCATTATCACCCTTGAACTCCGAAGAGCACCTTGCATCTGGAAGGTACTGGTAAATGAAGGCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227295.2 |