Pregenerated sensors for TMEM251 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046675Ensembl transcript IDs: ENSMUST00000057416.8
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAGCAATGGGTTGGTGGTGGCACAAACCTTTAATCCCAGCTGTTaGGGAGGCAGGGGCAGGCAAGAATTTGAAGCCAGCCTGATCTAC | + |
|
Preference number: 1 (lower is better) Translates to: KSNGLVVAQTFNPSC*GGRGRQEFEASLIY Trigger: GTAGATCAGGCTGGCTTCAAATTCTTGCCTGCCCCTGCCTCCCCAACAGCTGGGATTAAAGGTTTGTGCCACCACCAACCCATTGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR GCA 90 bp | CATCTGCCCCTGAATGCTAGATTACAGGAATGTGCCACCATACCCTaGCTATGGCTCTTAGCTTGGCTTTTCCAGTTACTTACCCTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: HLPLNARLQECATIP*LWLLAWLFQLLTLS Trigger: GGACAGGGTAAGTAACTGGAAAAGCCAAGCTAAGAGCCATAGGCAGGGTATGGTGGCACATTCCTGTAATCTAGCATTCAGGGGCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR TCA 90 bp | CTGGATACCCTGATTTCACCCAGGAAAGGAACAATATCTCTTCAGTaGTCTGTGCTGGTACACCTGGTGTCTGTGTTATTTCTAGACTTC | + |
|
Preference number: 1 (lower is better) Translates to: LDTLISPRKGTISLQ*SVLVHLVSVLFLDF Trigger: GAAGTCTAGAAATAACACAGACACCAGGTGTACCAGCACAGATCACTGAAGAGATATTGTTCCTTTCCTGGGTGAAATCAGGGTATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR TCA 90 bp | AACACAGTAGTTAAGAGTTGGCTTGTATGTTCGAGGATGTCAGTTTaGTCTTTAGCACCACAAAAAGCTCCCAGATGGTACAATTTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: NTVVKSWLVCSRMSV*SLAPQKAPRWYNLG Trigger: TCCCAAATTGTACCATCTGGGAGCTTTTTGTGGTGCTAAAGATCAAACTGACATCCTCGAACATACAAGCCAACTCTTAACTACTGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR TCA 90 bp | CTCATTTTCATTTTTGGTATGAGTCAGTATACACAGGTAAATAGTTaGTGTTTGTACACAGCATGGGATGTTGTGTCAGTGGTGAGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: LIFIFGMSQYTQVNS*CLYTAWDVVSVVRN Trigger: GTTCCTCACCACTGACACAACATCCCATGCTGTGTACAAACATCAACTATTTACCTGTGTATACTGACTCATACCAAAAATGAAAATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTCATGTAGACCAGGCTaGCCTCCAGCTCAGAGATTC | + |
|
Preference number: 2 (lower is better) Translates to: WRELSNLVQWKLGSLENWSCRPG*PPAQRF Trigger: GAATCTCTGAGCTGGAGGCCAGCCTGGTCTACATGA...CCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR CAA 90 bp | GGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATaGGTAAGCCCCAGGCCAGTAAGAAAGACCCTGTCTCCAAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: GAKQFGPVETGILGE*VSPRPVRKTLSPKS Trigger: AGATTTTGGAGACAGGGTCTTTCTTACTGGCCTGGGGCTTACCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTACCACTGGATACCCTaGTTTCACCCAGGAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: WRELSNLVQWKLGSLENWYHWIP*FHPGKE Trigger: TTCCTTTCCTGGGTGAAATCAGGGTATCCAGTGGTA...CCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGAGAGATTCGTCTCTCTaGCTCTCAAGTGCTAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: WRELSNLVQWKLGSLENWRDSSL*LSSASM Trigger: CATGCTAGCACTTGAGAGGCAGAGAGACGAATCTCT...CCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTAACCATACCCTGCCTATaGCTCTTAGCTTGGCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: EGAKQFGPVETGILGELVTIPCL*LLAWLF Trigger: GAAAAGCCAAGCTAAGAGCCATAGGCAGGGTATGGT...TACCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTATGTTTGTACACAGCATaGGATGTTGTGTCAGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: EGAKQFGPVETGILGELVCLYTA*DVVSVV Trigger: CACCACTGACACAACATCCCATGCTGTGTACAAACA...TACCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR GCA 90 bp | GTACAAAAAGCAATGGGTTGGTGGTGGCACAAACCTTTAATCCCAGCTGTTGGGTCAGCCACTATACAGTaGTGGCAGTCTTACAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: VQKAMGWWWHKPLIPAVGSATIQ*WQSYNK Trigger: CTTATTGTAAGACTGCCAGCACTGTATAGTGGCTGA...CCCAACAGCTGGGATTAAAGGTTTGTGCCACCACCAACCCATTGCTTTTTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTACTATGGCTCTTAGCTTaGCTTTTCCAGTTACTTACC | + |
|
Preference number: 2 (lower is better) Translates to: EGAKQFGPVETGILGELVLWLLA*LFQLLT Trigger: GGTAAGTAACTGGAAAAGCCAAGCTAAGAGCCATAG...TACCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGCAAGTTTCTAAAGACTaGAGGTTACAAGCCACTATT | + |
|
Preference number: 2 (lower is better) Translates to: WRELSNLVQWKLGSLENWQVSKD*RLQATI Trigger: AATAGTGGCTTGTAACCTGCAGTCTTTAGAAACTTG...CCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGTCAGTTTGATCTTTAGCACCACAAAAAGCTCCCAGATGGTACAATTTGGGTTCAGTGATCTGTGCTaGTACACCTGGTGTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: DVSLIFSTTKSSQMVQFGFSDLC*YTWCLC Trigger: ACACAGACACCAGGTGTACCAGCACAGATCACTGAA...CCCAAATTGTACCATCTGGGAGCTTTTTGTGGTGCTAAAGATCAAACTGACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGGACTAGGGTTATACAACACAGTAGTTAAGAGTTGGCTTGTATGTTCGAGGAATTTGAAGCCAGCCTaGTCTACAGGGCAAGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LGLGLYNTVVKSWLVCSRNLKPA*STGQVP Trigger: TGGAACTTGCCCTGTAGATCAGGCTGGCTTCAAATT...CCTCGAACATACAAGCCAACTCTTAACTACTGTGTTGTATAACCCTAGTCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR TCA 90 bp | TTAGGACTAGGGTTATACAACACAGTAGTTAAGAGTTGGCTTGTATGTTCGAGGACAATATCTCTTCAGTaGTCTGTGCTGGTACACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LGLGLYNTVVKSWLVCSRTISLQ*SVLVHL Trigger: CAGGTGTACCAGCACAGATCACTGAAGAGATATTGT...CCTCGAACATACAAGCCAACTCTTAACTACTGTGTTGTATAACCCTAGTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAGGACTAGGGTTATACAACACAGTAGTTAAGAGTTGGCTTGTATGTTCGAGGAAAGCAATGGGTTGGTaGTGGCACAAACCTTTAATC | + |
|
Preference number: 2 (lower is better) Translates to: LGLGLYNTVVKSWLVCSRKAMGW*WHKPLI Trigger: GATTAAAGGTTTGTGCCACCACCAACCCATTGCTTT...CCTCGAACATACAAGCCAACTCTTAACTACTGTGTTGTATAACCCTAGTCCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR TCA 90 bp | AATTTTAGCCTCTCTGTTCAAATACAGCAGTTAGTGAGGTTGCTGAGAAACTTTACACAGGTAAATAGTTaGTGTTTGTACACAGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: NFSLSVQIQQLVRLLRNFTQVNS*CLYTAW Trigger: CCATGCTGTGTACAAACATCAACTATTTACCTGTGT...AAAGTTTCTCAGCAACCTCACTAACTGCTGTATTTGAACAGAGAGGCTAAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCATGCATATTAAAAGCACTCAAAAGATGCACCTGATTCACAGAAGTAGTTTTTCGAGGATGTCAGTTTaGTCTTTAGCACCACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SMHIKSTQKMHLIHRSSFSRMSV*SLAPQK Trigger: TTTTTGTGGTGCTAAAGATCAAACTGACATCCTCGA...AAAACTACTTCTGTGAATCAGGTGCATCTTTTGAGTGCTTTTAATATGCATGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR TCA 72 bp | TCCCAGCTGTTGGGGAGGCAGGGGCAGGCAAGAATTTaGAGCCAGCCTGATCTACAGGGCAAGTTCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SQLLGRQGQARI*SQPDLQGKFQD Trigger: GTCCTGGAACTTGCCCTGTAGATCAGGCTGGCTTCAAATTCTTGCCTGCCCCTGCCTCCCCAACAGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR CCA 72 bp | GGGTTGGTGGTGGCACAAACCTTTAATCCCAGCTGTTaGGGAGGCAGGGGCAGGCAAGAATTTGAAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GLVVAQTFNPSC*GGRGRQEFEAS Trigger: GCTGGCTTCAAATTCTTGCCTGCCCCTGCCTCCCCAACAGCTGGGATTAAAGGTTTGTGCCACCACCAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTAGAAGAAACTGCAGTCTaGTGGTCAGCCACTATACAG | + |
|
Preference number: 3 (lower is better) Translates to: EGAKQFGPVETGILGELVEETAV*WSATIQ Trigger: CTGTATAGTGGCTGACCACAAGACTGCAGTTTCTTC...TACCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTAGTAGCAACAGCTGCCTaGGTATTGGGAGTAAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EGAKQFGPVETGILGELVVATAA*VLGVKS Trigger: ACTCTTTACTCCCAATACCAAGGCAGCTGTTGCTAC...TACCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGCCTATGGCTCTTAGCTaGGCTTTTCCAGTTACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: WRELSNLVQWKLGSLENWPMALS*AFPVTY Trigger: GTAAGTAACTGGAAAAGCCAAGCTAAGAGCCATAGG...CCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTAAAAGCAGTTGGGTCTTaGAGTTCAAAGCCAACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EGAKQFGPVETGILGELVKAVGS*SSKPTW Trigger: CCAGGTTGGCTTTGAACTCAAAGACCCAACTGCTTT...TACCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGTTGAGTTTGTGGGTTTaGGTTTTTGTCTTATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: WRELSNLVQWKLGSLENWLSLWV*VFVLWG Trigger: CCCCCATAAGACAAAAACCAAAACCCACAAACTCAA...CCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR TCA 72 bp | AGACTAGATTTACAGAGATCCACCTGCATCTGCCCCTaGATGCTAGATTACAGGAATGTGCCACCATACCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLDLQRSTCICP*MLDYRNVPPYP Trigger: AGGGTATGGTGGCACATTCCTGTAATCTAGCATTCAGGGGCAGATGCAGGTGGATCTCTGTAAATCTAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR GCA 72 bp | CTGAATGCTAGATTACAGGAATGTGCCACCATACCCTaGCTATGGCTCTTAGCTTGGCTTTTCCAGTTACTT | + |
|
Preference number: 3 (lower is better) Translates to: LNARLQECATIP*LWLLAWLFQLL Trigger: AAGTAACTGGAAAAGCCAAGCTAAGAGCCATAGGCAGGGTATGGTGGCACATTCCTGTAATCTAGCATTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR TCA 72 bp | GTTAAGAGTTGGCTTGTATGTTCGAGGATGTCAGTTTaGTCTTTAGCACCACAAAAAGCTCCCAGATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VKSWLVCSRMSV*SLAPQKAPRWY Trigger: GTACCATCTGGGAGCTTTTTGTGGTGCTAAAGATCAAACTGACATCCTCGAACATACAAGCCAACTCTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR CCA 72 bp | ATATCTGGAAATGCCTTTAATCCCTGCAAAAGCAGTTaGGTCTTTGAGTTCAAAGCCAACCTGGTCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISGNAFNPCKSS*VFEFKANLVYR Trigger: TCTGTAGACCAGGTTGGCTTTGAACTCAAAGACCCAACTGCTTTTGCAGGGATTAAAGGCATTTCCAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR CCA 72 bp | AAATCTAAATGGATAGCACCTGAGAAAACATGTTCATaGTTGTCCTCTGCCCTCCATATATACACTATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSKWIAPEKTCS*LSSALHIYTMA Trigger: TGCCATAGTGTATATATGGAGGGCAGAGGACAACCATGAACATGTTTTCTCAGGTGCTATCCATTTAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGCATATTAAAAGCACTCAAAAGATGCACCTGATTCACAGAAGTAGTTTTACAAAAAGCAATGGGTaGGTGGTGGCACAAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SMHIKSTQKMHLIHRSSFTKSNG*VVAQTF Trigger: AAAGGTTTGTGCCACCACCAACCCATTGCTTTTTGT...AAAACTACTTCTGTGAATCAGGTGCATCTTTTGAGTGCTTTTAATATGCATGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR TCA 72 bp | ATTTTTGGTATGAGTCAGTATACACAGGTAAATAGTTaGTGTTTGTACACAGCATGGGATGTTGTGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: IFGMSQYTQVNS*CLYTAWDVVSV Trigger: CACTGACACAACATCCCATGCTGTGTACAAACATCAACTATTTACCTGTGTATACTGACTCATACCAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR CAA 72 bp | GGAATGTGCCACCATACCCTGCCTATGGCTCTTAGCTaGGCTTTTCCAGTTACTTACCCTGTCCATGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GMCHHTLPMALS*AFPVTYPVHGQ Trigger: CTGTCCATGGACAGGGTAAGTAACTGGAAAAGCCAAGCTAAGAGCCATAGGCAGGGTATGGTGGCACATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGGGAGCTAAGCAATTTGGTCCAGTGGAAACTGGGATCCTTGGAGAATTGGCCATGCTCTGTGCAGTaGTCCCGAAAATCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRELSNLVQWKLGSLENWPCSVQ*SRKSSC Trigger: ACAGGAAGATTTTCGGGACCACTGCACAGAGCATGG...CCAATTCTCCAAGGATCCCAGTTTCCACTGGACCAAATTGCTTAGCTCCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| CDS-3UTR CCA 90 bp | GATGTCAGTTTGATCTTTAGCACCACAAAAAGCTCCCAGATGGTACAATTTGGGAGTAGCCCACTGTTTTaGGATCCGCTCTCGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVSLIFSTTKSSQMVQFGSSPLF*DPLSYK Trigger: CTTGTACGAGAGCGGATCCCAAAACAGTGGGCTACT...CCCAAATTGTACCATCTGGGAGCTTTTTGTGGTGCTAAAGATCAAACTGACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGACTAGGGTTATACAACACAGTAGTTAAGAGTTGGCTTGTATGTTCGAGGATCCATCCCATCCGCTaGCGGAAGTTCATCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLGLYNTVVKSWLVCSRIHPIR*RKFIIL Trigger: GAGAATGATGAACTTCCGTCAGCGGATGGGATGGAT...CCTCGAACATACAAGCCAACTCTTAACTACTGTGTTGTATAACCCTAGTCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR CAA 72 bp | GAAATGCCTTTAATCCCTGCAAAAGCAGTTGGGTCTTaGAGTTCAAAGCCAACCTGGTCTACAGAGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EMPLIPAKAVGS*SSKPTWSTEQV Trigger: AACTTGCTCTGTAGACCAGGTTGGCTTTGAACTCAAAGACCCAACTGCTTTTGCAGGGATTAAAGGCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| CDS-3UTR GCA 90 bp | AGCATGCATATTAAAAGCACTCAAAAGATGCACCTGATTCACAGAAGTAGTTTTGTTCATCATTCTCCATaGTCTGTGCAGTGGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SMHIKSTQKMHLIHRSSFVHHSP*SVQWSR Trigger: TCGGGACCACTGCACAGAGCATGGAGAATGATGAAC...AAAACTACTTCTGTGAATCAGGTGCATCTTTTGAGTGCTTTTAATATGCATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| 3UTR CAA 72 bp | AGTAGCAACAGCTGCCTTGGTATTGGGAGTAAAGAGTaGGTGAAGAATACTTCTAAAACATTTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNSCLGIGSKE*VKNTSKTFLQH Trigger: ATGCTGCAGAAATGTTTTAGAAGTATTCTTCACCAACTCTTTACTCCCAATACCAAGGCAGCTGTTGCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||
| CDS TCA 72 bp | AGCAAATACAGTCCCACTCCAATCCATCCCATCCGCTaGCGGAAGTTCATCATTCTCCATGCTCTGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SKYSPTPIHPIR*RKFIILHALCS Trigger: ACTGCACAGAGCATGGAGAATGATGAACTTCCGTCAGCGGATGGGATGGATTGGAGTGGGACTGTATTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057416.8 |
||