RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM249 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000116376

Ensembl transcript IDs: ENSMUST00000230604.2

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGGCGGCGCTGCGGTATTaGGGAGAGCATGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRAALRY*GEHEPQ
Trigger: TTGTGGCTCATGCTCTCCTCAATACCGCAGCGCCGC...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR GCA 90 bp CAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGCCCGGCATCAGAACTGAGTaGCAGGCGCACGTAGACCAG +
Preference number: 4 (lower is better)
Translates to: QDGDKGHRVGKRRPGLRPGIRTE*QAHVDQ
Trigger: CTGGTCTACGTGCGCCTGGCACTCAGTTCTGATGCC...GGGCCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR CCA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGTACATGCCGCGCGTGTaGTTCAACACTAGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRYMPRV*FNTRRR
Trigger: GCGCCGCCTAGTGTTGAACCACACGCGCGGCATGTA...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR CCA 90 bp CAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGCCCCCTTGGATGGAGAAGTaGTACATGCCGCGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: QDGDKGHRVGKRRPGLRPPWMEK*YMPRVW
Trigger: CCACACGCGCGGCATGTACCACTTCTCCATCCAAGG...GGGCCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR CCA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGAAAGGAGGCCCCCAGTaGCCAGTGGCGGACTACATG +
Preference number: 4 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRKGGPQ*PVADYM
Trigger: CATGTAGTCCGCCACTGGCCACTGGGGGCCTCCTTT...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR CCA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGCAGTTCGGCCTTGGATaGAGAAGTGGTACATGCCGC +
Preference number: 4 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRQFGLG*RSGTCR
Trigger: GCGGCATGTACCACTTCTCCATCCAAGGCCGAACTG...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR GCA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGTGGAGAAGTGGTACATaGCGCGCGTGTGGTTCAACA +
Preference number: 4 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRWRSGT*RACGST
Trigger: TGTTGAACCACACGCGCGGCATGTACCACTTCTCCA...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR GCA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGAGTTTCCGGGCAAGGTaGCGGCCCAAGAATTCCATT +
Preference number: 4 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRSFRAR*RPKNSI
Trigger: AATGGAATTCTTGGGCCGGCACCTTGCCCGGAAACT...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR TCA 90 bp CAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGCCCCAGGTCGTTGACACTTaGCTTAGTGTAGACTTGTGT +
Preference number: 4 (lower is better)
Translates to: QDGDKGHRVGKRRPGLRPQVVDT*LSVDLC
Trigger: ACACAAGTCTACACTAAGTCAAGTGTCAACGACCTG...GGGCCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR CCA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGCATACAGTTCGGCCTTaGATGGAGAAGTGGTACATG +
Preference number: 4 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRHTVRP*MEKWYM
Trigger: CATGTACCACTTCTCCATCCAAGGCCGAACTGTATG...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS GCA 90 bp TTGGCCCCTGACATACAGTTCGGCCTTGGATGGAGAAGTGGTACATaGCGCGCGTGTGGTTCAACACTAGGCGGCGCTGCGGTATTGAGG +
Preference number: 5 (lower is better)
Translates to: LAPDIQFGLGWRSGT*RACGSTLGGAAVLR
Trigger: CCTCAATACCGCAGCGCCGCCTAGTGTTGAACCACACGCGCGGCATGTACCACTTCTCCATCCAAGGCCGAACTGTATGTCAGGGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR CAA 90 bp CAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGCCCCGTAGACCAGATGCATaGGCCCCTGACATACAGTTC +
Preference number: 5 (lower is better)
Translates to: QDGDKGHRVGKRRPGLRPRRPDA*APDIQF
Trigger: GAACTGTATGTCAGGGGCCAATGCATCTGGTCTACG...GGGCCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CCA 90 bp CGTAGACCAGATGCATTGGCCCCTGACATACAGTTCGGCCTTGGATaGAGAAGTGGTACATGCCGCGCGTGTGGTTCAACACTAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RRPDALAPDIQFGLG*RSGTCRACGSTLGG
Trigger: GCCGCCTAGTGTTGAACCACACGCGCGGCATGTACCACTTCTCCATCCAAGGCCGAACTGTATGTCAGGGGCCAATGCATCTGGTCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CCA 90 bp TTGTGTTTTTCGCTGCACAATGCCAGGGCTAAAGGAGGCCCCCAGTaGCCAGTGGCGGACTACATGACGATAGGAGGAGGCCAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: LCFSLHNARAKGGPQ*PVADYMTIGGGQVV
Trigger: GACTACCTGGCCTCCTCCTATCGTCATGTAGTCCGCCACTGGCCACTGGGGGCCTCCTTTAGCCCTGGCATTGTGCAGCGAAAAACACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS GCA 90 bp GAGAAGTGGTACATGCCGCGCGTGTGGTTCAACACTAGGCGGCGCTaGGGTATTGAGGAGAGCATGAGCCACAAGCCTATAACCATGCCA +
Preference number: 5 (lower is better)
Translates to: EKWYMPRVWFNTRRR*GIEESMSHKPITMP
Trigger: TGGCATGGTTATAGGCTTGTGGCTCATGCTCTCCTCAATACCGCAGCGCCGCCTAGTGTTGAACCACACGCGCGGCATGTACCACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS TCA 90 bp CACAAAGGACCAGCTGGAAGAAGCGACCTCCATAGGCATCAGAACTaGGTGCCAGGCGCACGTAGACCAGATGCATTGGCCCCTGACATA +
Preference number: 5 (lower is better)
Translates to: HKGPAGRSDLHRHQN*VPGARRPDALAPDI
Trigger: TATGTCAGGGGCCAATGCATCTGGTCTACGTGCGCCTGGCACTCAGTTCTGATGCCTATGGAGGTCGCTTCTTCCAGCTGGTCCTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS GCA 90 bp AAGGACCAGCTGGAAGAAGCGACCTCCATAGGCATCAGAACTGAGTaGCAGGCGCACGTAGACCAGATGCATTGGCCCCTGACATACAGT +
Preference number: 5 (lower is better)
Translates to: KDQLEEATSIGIRTE*QAHVDQMHWPLTYS
Trigger: ACTGTATGTCAGGGGCCAATGCATCTGGTCTACGTGCGCCTGGCACTCAGTTCTGATGCCTATGGAGGTCGCTTCTTCCAGCTGGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS-3UTR CAA 90 bp CTCCAGGATGGGGATAAGGGACACAGGGTAGGCAAAAGGAGGCCAGGGCTCAGGACATACAGTTCGGCCTaGGATGGAGAAGTGGTACAT +
Preference number: 5 (lower is better)
Translates to: LQDGDKGHRVGKRRPGLRTYSSA*DGEVVH
Trigger: ATGTACCACTTCTCCATCCAAGGCCGAACTGTATGT...CCTGAGCCCTGGCCTCCTTTTGCCTACCCTGTGTCCCTTATCCCCATCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CCA 90 bp ATAGGCATCAGAACTGAGTGCCAGGCGCACGTAGACCAGATGCATTaGCCCCTGACATACAGTTCGGCCTTGGATGGAGAAGTGGTACAT +
Preference number: 5 (lower is better)
Translates to: IGIRTECQAHVDQMH*PLTYSSALDGEVVH
Trigger: ATGTACCACTTCTCCATCCAAGGCCGAACTGTATGTCAGGGGCCAATGCATCTGGTCTACGTGCGCCTGGCACTCAGTTCTGATGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CCA 72 bp TCGCTGCACAATGCCAGGGCTAAAGGAGGCCCCCAGTaGCCAGTGGCGGACTACATGACGATAGGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: SLHNARAKGGPQ*PVADYMTIGGG
Trigger: GCCTCCTCCTATCGTCATGTAGTCCGCCACTGGCCACTGGGGGCCTCCTTTAGCCCTGGCATTGTGCAGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS GCA 72 bp GACATACAGTTCGGCCTTGGATGGAGAAGTGGTACATaGCGCGCGTGTGGTTCAACACTAGGCGGCGCTGCG +
Preference number: 6 (lower is better)
Translates to: DIQFGLGWRSGT*RACGSTLGGAA
Trigger: CGCAGCGCCGCCTAGTGTTGAACCACACGCGCGGCATGTACCACTTCTCCATCCAAGGCCGAACTGTATGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS TCA 72 bp CCAGCTGGAAGAAGCGACCTCCATAGGCATCAGAACTaGGTGCCAGGCGCACGTAGACCAGATGCATTGGCC +
Preference number: 6 (lower is better)
Translates to: PAGRSDLHRHQN*VPGARRPDALA
Trigger: GGCCAATGCATCTGGTCTACGTGCGCCTGGCACTCAGTTCTGATGCCTATGGAGGTCGCTTCTTCCAGCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS GCA 72 bp CTGGAAGAAGCGACCTCCATAGGCATCAGAACTGAGTaGCAGGCGCACGTAGACCAGATGCATTGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: LEEATSIGIRTE*QAHVDQMHWPL
Trigger: CAGGGGCCAATGCATCTGGTCTACGTGCGCCTGGCACTCAGTTCTGATGCCTATGGAGGTCGCTTCTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CAA 72 bp CGCTCTGACAGCTGCACCAGCACAAGTGGCTCTAGCTaGTGGCCACAAAGGACCAGCTGGAAGAAGCGACCT +
Preference number: 6 (lower is better)
Translates to: RSDSCTSTSGSS*WPQRTSWKKRP
Trigger: AGGTCGCTTCTTCCAGCTGGTCCTTTGTGGCCACAAGCTAGAGCCACTTGTGCTGGTGCAGCTGTCAGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS GCA 72 bp TACATGCCGCGCGTGTGGTTCAACACTAGGCGGCGCTaGGGTATTGAGGAGAGCATGAGCCACAAGCCTATA +
Preference number: 6 (lower is better)
Translates to: YMPRVWFNTRRR*GIEESMSHKPI
Trigger: TATAGGCTTGTGGCTCATGCTCTCCTCAATACCGCAGCGCCGCCTAGTGTTGAACCACACGCGCGGCATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CAA 72 bp GACCAGATGCATTGGCCCCTGACATACAGTTCGGCCTaGGATGGAGAAGTGGTACATGCCGCGCGTGTGGTT +
Preference number: 6 (lower is better)
Translates to: DQMHWPLTYSSA*DGEVVHAARVV
Trigger: AACCACACGCGCGGCATGTACCACTTCTCCATCCAAGGCCGAACTGTATGTCAGGGGCCAATGCATCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CCA 72 bp GATGCATTGGCCCCTGACATACAGTTCGGCCTTGGATaGAGAAGTGGTACATGCCGCGCGTGTGGTTCAACA +
Preference number: 6 (lower is better)
Translates to: DALAPDIQFGLG*RSGTCRACGST
Trigger: TGTTGAACCACACGCGCGGCATGTACCACTTCTCCATCCAAGGCCGAACTGTATGTCAGGGGCCAATGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2
CDS CCA 72 bp AGAACTGAGTGCCAGGCGCACGTAGACCAGATGCATTaGCCCCTGACATACAGTTCGGCCTTGGATGGAGAA +
Preference number: 6 (lower is better)
Translates to: RTECQAHVDQMH*PLTYSSALDGE
Trigger: TTCTCCATCCAAGGCCGAACTGTATGTCAGGGGCCAATGCATCTGGTCTACGTGCGCCTGGCACTCAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230604.2