Pregenerated sensors for TMEM248 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053094Ensembl transcript IDs: ENSMUST00000065329.13, ENSMUST00000111298.6, ENSMUST00000200802.4, ENSMUST00000202305.4
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGGGACGGGAGATGGATCTGCTGCCCTCGAGTCCCACAGTGCCTaGAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCACTGCC | + |
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Preference number: 1 (lower is better) Translates to: QGTGDGSAALESHSA*RRVKTQEAGFLCTA Trigger: GGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGCAGCAGATCCATCTCCCGTCCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | GCAGCAAGGGACGGGAGATGGATCTGCTGCCCTCGAGTCCCACAGTaGCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCAC | + |
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Preference number: 1 (lower is better) Translates to: AARDGRWICCPRVPQ*LQEGQNTGGWVPMH Trigger: GTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGCAGCAGATCCATCTCCCGTCCCTTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | CATGTCCATGCCCTCCTGCCCCTCGACGAGGGGGACGAGTTCAGGTaGATCCAGGGCAAAGCACGTGCATCACAGGACCAATTTCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: HVHALLPLDEGDEFR*IQGKARASQDQFPD Trigger: ATCTGGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGAACTCGTCCCCCTCGTCGAGGGGCAGGAGGGCATGGACATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | TCAGCTAGTGACCATCATGCAGCAAGGGACGGGAGATGGATCTGCTaGCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGA | + |
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Preference number: 1 (lower is better) Translates to: SASDHHAARDGRWIC*PRVPQCLQEGQNTG Trigger: TCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGCAGCAGATCCATCTCCCGTCCCTTGCTGCATGATGGTCACTAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | AGGTATACCAGCAAGGAACAGCTGAGGACTGGGCCCAGATGTGTCTaGAGTCCCCTAAACTTCAGCCCACAACTCCCTTCCCCAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: RYTSKEQLRTGPRCV*SPLNFSPQLPSPAI Trigger: GATGGCTGGGGAAGGGAGTTGTGGGCTGAAGTTTAGGGGACTGCAGACACATCTGGGCCCAGTCCTCAGCTGTTCCTTGCTGGTATACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | AGATCAGCTAGTGACCATCATGCAGCAAGGGACGGGAGATGGATCTaGTGCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACA | + |
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Preference number: 1 (lower is better) Translates to: RSASDHHAARDGRWI*CPRVPQCLQEGQNT Trigger: TGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGCAGCAGATCCATCTCCCGTCCCTTGCTGCATGATGGTCACTAGCTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR CCA 90 bp | CCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTaGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: PRVPQCLQEGQNTGG*VPMHCQEHNRNTRF Trigger: GAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | GGTATCAGTATGTGGCCCAGGCTGGCCCTGAACTTGAGATTCTCCTaGCTCAGCCTCCAAAGGGCTGCTCTTACATGCATTTATCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: GISMWPRLALNLRFS*LSLQRAALTCIYLH Trigger: GTGAAGATAAATGCATGTAAGAGCAGCCCTTTGGAGGCTGAGGCAGGAGAATCTCAAGTTCAGGGCCAGCCTGGGCCACATACTGATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | CCTCGACGAGGGGGACGAGTTCAGGTGCATCCAGGGCAAAGCACGTaGATCACAGGACCAATTTCCAGATCAGTGTTTATAAATATGGAC | + |
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Preference number: 1 (lower is better) Translates to: PRRGGRVQVHPGQST*ITGPISRSVFINMD Trigger: GTCCATATTTATAAACACTGATCTGGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGAACTCGTCCCCCTCGTCGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | GCTGGCCCTGAACTTGAGATTCTCCTGCCTCAGCCTCCAAAGGGCTaGTCTTACATGCATTTATCTTCACACCCAACAAGTCTGGAACAC | + |
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Preference number: 1 (lower is better) Translates to: AGPELEILLPQPPKG*SYMHLSSHPTSLEH Trigger: GTGTTCCAGACTTGTTGGGTGTGAAGATAAATGCATGTAAGAGCAGCCCTTTGGAGGCTGAGGCAGGAGAATCTCAAGTTCAGGGCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | TGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCACTaGCAAGAACACAACAGAAATACCAGGTTCCAAACGATGAGAACT | + |
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Preference number: 1 (lower is better) Translates to: CLQEGQNTGGWVPMH*QEHNRNTRFQTMRT Trigger: AGTTCTCATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR TCA 90 bp | CTTCCCCAGCCATCCTCCATCTGTCTACCTGCTACGGTGAATATCTaGATTTTAAAGTATGTATCTGGCCTCAGGATGGGTCATGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: LPQPSSICLPATVNI*ILKYVSGLRMGHVP Trigger: TGGGACATGACCCATCCTGAGGCCAGATACATACTTTAAAATTCAGATATTCACCGTAGCAGGTAGACAGATGGAGGATGGCTGGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR GCA 90 bp | TTCAGCCCACAACTCCCTTCCCCAGCCATCCTCCATCTGTCTACCTaGTACGGTGAATATCTGAATTTTAAAGTATGTATCTGGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: FSPQLPSPAILHLST*YGEYLNFKVCIWPQ Trigger: CTGAGGCCAGATACATACTTTAAAATTCAGATATTCACCGTAGCAGGTAGACAGATGGAGGATGGCTGGGGAAGGGAGTTGTGGGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR TCA 90 bp | CTTACATGCATTTATCTTCACACCCAACAAGTCTGGAACACTGCTTaGGAGAACACTGTCTGGGGATTGTTAAGGCAAGGCGCTGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LTCIYLHTQQVWNTA*ENTVWGLLRQGAER Trigger: TCTCTCAGCGCCTTGCCTTAACAATCCCCAGACAGTGTTCTCTCAAGCAGTGTTCCAGACTTGTTGGGTGTGAAGATAAATGCATGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR TCA 90 bp | CTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATaGGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATA | + |
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Preference number: 1 (lower is better) Translates to: LCTAKNTTEIPGSKR*ELTHRIKTDSSHTI Trigger: TATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTTGTGATGGTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTATGTCCATGCCCTCCTaGCCCTCGACGAGGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: RSCDGPPSHPLQIPATACMSMPS*PSTRGT Trigger: CGTCCCCCTCGTCGAGGGGCAGGAGGGCATGGACAT...ACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGACCATCACAAGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCAGGGTATCAGTATGTaGCCCAGGCTGGCCCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: ALESHSACRRVKTQEAGFQGISM*PRLALN Trigger: GTTCAGGGCCAGCCTGGGCCACATACTGATACCCTG...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR CCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCGCAAGCCAGTGCTGCTaGGGTCAGAGGTCTCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: ALESHSACRRVKTQEAGFASQCC*GQRSLV Trigger: TACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGC...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTGGGGACTTCCTCTCCCTACGCCCTGGCTCTCCGTaGAGAAGCCCATGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: IWPQDGSCPKHFGDFLSLRPGSP*RSPCPC Trigger: GCATGGACATGGGCTTCTTCACGGAGAGCCAGGGCG...TAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTCATTAACACAAGGAGAAGCCCATGTCCATaGCCTCCTGCCCCTCGACGA | + |
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Preference number: 2 (lower is better) Translates to: VLLPTLYRSQPLPVINTRRSPCP*PPAPRR Trigger: TCGTCGAGGGGCAGGAGGGCATGGACATGGGCTTCT...CCTTGTGTTAATGACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTTGTGATGGTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTCATGTATTCACAGAGTaGCCAGGCCCTGGCCGATTC | + |
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Preference number: 2 (lower is better) Translates to: RSCDGPPSHPLQIPATACHVFTE*PGPGRF Trigger: GAATCGGCCAGGGCCTGGCCACTCTGTGAATACATG...ACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGACCATCACAAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCTCATTAACACAAGGATaGCTAAGAGGAACACAGCCG | + |
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Preference number: 2 (lower is better) Translates to: ALESHSACRRVKTQEAGFSLTQG*LRGTQP Trigger: CGGCTGTGTTCCTCTTAGTCATCCTTGTGTTAATGA...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCAGTCATACCATACGGTaGGAGACAAAAGGAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ALESHSACRRVKTQEAGFSHTIR*ETKGKR Trigger: TCTCTTTCCTTTTGTCTCTCACCGTATGGTATGACT...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCTCTCCTGGAGATGTGTaGTGTATAGAAATGAATGCA | + |
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Preference number: 2 (lower is better) Translates to: ALESHSACRRVKTQEAGFSPGDV*CIEMNA Trigger: TGCATTCATTTCTATACATCACACATCTCCAGGAGA...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAAATCAATGGGGGAAGGGACGCCATCACAGATCAGCTAGTGACCATCATCCAGCAAGGAACAGCTaGGGACTGGGCCCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: TENQWGKGRHHRSASDHHPARNS*GLGPDV Trigger: CACATCTGGGCCCAGTCCTCAGCTGTTCCTTGCTGG...ATGATGGTCACTAGCTGATCTGTGATGGCGTCCCTTCCCCCATTGATTTTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCGAGATCAATATGATCTaGAACAAGCAATTCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALESHSACRRVKTQEAGFEINMI*NKQFPG Trigger: TCCTGGGAATTGCTTGTTTCAGATCATATTGATCTC...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | CGAGAGGGCAATGGGACAGAGGGACCAGAAGGTCACACCTGTCCTAAGGAAAATCCAGGGCAAAGCACGTaGATCACAGGACCAATTTCC | + |
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Preference number: 2 (lower is better) Translates to: REGNGTEGPEGHTCPKENPGQST*ITGPIS Trigger: GGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGG...ATTTTCCTTAGGACAGGTGTGACCTTCTGGTCCCTCTGTCCCATTGCCCTCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTGGGGACTTCCTCTCCCTACACCAGAGGGAACAGTaGCTTCTGAAACGCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: IWPQDGSCPKHFGDFLSLHQREQ*LLKRSV Trigger: GACACTGCGTTTCAGAAGCCACTGTTCCCTCTGGTG...TAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAATCAATGGGGGAAGGGACGCCATCACAGATCAGCTAGTGACCATCATATGAGGGCAAGCCAGTaGTGCTGGGGTCAGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: TENQWGKGRHHRSASDHHMRASQ*CWGQRS Trigger: AGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCAT...ATGATGGTCACTAGCTGATCTGTGATGGCGTCCCTTCCCCCATTGATTTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCACTGCCAAAATCCTTCCAGTTTTaGCTAGCAAGCCATCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: TVPAGGSKHRRLGSYALPKSFQF*LASHQR Trigger: TCTCTGATGGCTTGCTAGTCAAAACTGGAAGGATTT...TGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGGCAAGCCAGTGCTGCTGGGGTCAGAGGTCTCTAGTAGCCCACTCTGACGTTAAGGCAAGGCGCTaGGAGAAAAACATTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: MRASQCCWGQRSLVAHSDVKARR*EKNIEN Trigger: ATTTTCAATGTTTTTCTCTCAGCGCCTTGCCTTAAC...GTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTGGGGACTTCCTCTCCCTATCAGAGAGTGCCTCATaGCTTCTTCCTTCAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: IWPQDGSCPKHFGDFLSLSESAS*LLPSDL Trigger: GAGATCTGAAGGAAGAAGGCATGAGGCACTCTCTGA...TAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGATGAGGGCAAGCCAGTaGTGCTGGGGTCAGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMMRASQ*CWGQRS Trigger: AGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCAT...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | CTTCAATTGAGACAGATCTACAGTTACAGGACAAAAGTGCTGACATACCTAAGTATGTCCATGCCCTCCTaGCCCTCGACGAGGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: LQLRQIYSYRTKVLTYLSMSMPS*PSTRGT Trigger: CGTCCCCCTCGTCGAGGGGCAGGAGGGCATGGACAT...ACTTAGGTATGTCAGCACTTTTGTCCTGTAACTGTAGATCTGTCTCAATTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | ACACAGGAGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTCAAGCCATCAGAGAGTaGCTCATGCCTTCTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TQEAGFLCTAKNTTEIPGQAIRE*LMPSSF Trigger: GAAGGAAGAAGGCATGAGGCACTCTCTGATGGCTTG...ACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGGGGCCCAGATGTGTCTaGAGTCCCCTAAACTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMGPRCV*SPLNFS Trigger: GCTGAAGTTTAGGGGACTGCAGACACATCTGGGCCC...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTTGTGATGGTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTAATGATCATGGTTCTTaGTCTCTCAGAAAATGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RSCDGPPSHPLQIPATACNDHGS*SLRKWG Trigger: TCCCCATTTTCTGAGAGACCAAGAACCATGATCATT...ACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGACCATCACAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTCGCCCTGGCTCTCCGTaGAGAAGCCCATGTCCATGC | + |
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Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGRPGSP*RSPCPC Trigger: GCATGGACATGGGCTTCTTCACGGAGAGCCAGGGCG...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACAGTAACAGCTTAATCTaGAGTTTGGTGGTCCGGATG | + |
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Preference number: 2 (lower is better) Translates to: RLGSYALPRTQQKYQVPNSNSLI*SLVVRM Trigger: CATCCGGACCACCAAACTTCAGATTAAGCTGTTACT...GTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAATCAATGGGGGAAGGGACGCCATCACAGATCAGCTAGTGACCATCATCAGCCTCCAAAGGGCTaGTCTTACATGCATTTATCT | + |
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Preference number: 2 (lower is better) Translates to: TENQWGKGRHHRSASDHHQPPKG*SYMHLS Trigger: AGATAAATGCATGTAAGAGCAGCCCTTTGGAGGCTG...ATGATGGTCACTAGCTGATCTGTGATGGCGTCCCTTCCCCCATTGATTTTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTCCAGCAAGGAACAGCTaGGGACTGGGCCCAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGPARNS*GLGPDV Trigger: CACATCTGGGCCCAGTCCTCAGCTGTTCCTTGCTGG...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | AGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACAGTCATACCATACGGTaGGAGACAAAAGGAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RLGSYALPRTQQKYQVPNSHTIR*ETKGKR Trigger: TCTCTTTCCTTTTGTCTCTCACCGTATGGTATGACT...GTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGACAAGTCTGGAACACTaGTTGAGAGAACACTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMTSLEH*LREHCL Trigger: CAGACAGTGTTCTCTCAAGCAGTGTTCCAGACTTGT...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| 3UTR-3UTR TCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGTCTCCTGGAGATGTGTaGTGTATAGAAATGAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMSPGDV*CIEMNA Trigger: TGCATTCATTTCTATACATCACACATCTCCAGGAGA...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAATTGAGACAGATCTACAGTTACAGGACAAAAGTGCTGACATACCTAAGTAACTTGAGATTCTCCTaGCTCAGCCTCCAAAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: LQLRQIYSYRTKVLTYLSNLRFS*LSLQRA Trigger: AGCCCTTTGGAGGCTGAGGCAGGAGAATCTCAAGTT...ACTTAGGTATGTCAGCACTTTTGTCCTGTAACTGTAGATCTGTCTCAATTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR CCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTCATGTATTCACAGAGTaGCCAGGCCCTGGCCGATTC | + |
|
Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGHVFTE*PGPGRF Trigger: GAATCGGCCAGGGCCTGGCCACTCTGTGAATACATG...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR TCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTGTCTGGAACACTGCTTaGGAGAACACTGTCTGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGVWNTA*ENTVWG Trigger: TCCCCAGACAGTGTTCTCTCAAGCAGTGTTCCAGAC...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR GCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTCCAGGGCAAAGCACGTaGATCACAGGACCAATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGPGQST*ITGPIS Trigger: GGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGG...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGTACATACCTATAATGTaGATTCTCCTGGAGATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMYIPIM*ILLEMC Trigger: ACACATCTCCAGGAGAATGCACATTATAGGTATGTA...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR TCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTTCATTAACACAAGGATaGCTAAGAGGAACACAGCCG | + |
|
Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGSLTQG*LRGTQP Trigger: CGGCTGTGTTCCTCTTAGTCATCCTTGTGTTAATGA...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAATTGAGACAGATCTACAGTTACAGGACAAAAGTGCTGACATACCTAAGTTACATACCTATAATGTaGATTCTCCTGGAGATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LQLRQIYSYRTKVLTYLSYIPIM*ILLEMC Trigger: ACACATCTCCAGGAGAATGCACATTATAGGTATGTA...ACTTAGGTATGTCAGCACTTTTGTCCTGTAACTGTAGATCTGTCTCAATTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR TCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTGTTAAGGCAAGGCGCTaGGAGAAAAACATTGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGVKARR*EKNIEN Trigger: ATTTTCAATGTTTTTCTCTCAGCGCCTTGCCTTAAC...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR CCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTAATGATCATGGTTCTTaGTCTCTCAGAAAATGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NDENLHIESKLIQVIPYGNDHGS*SLRKWG Trigger: TCCCCATTTTCTGAGAGACCAAGAACCATGATCATT...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | AGCTCTGGCAAGATCCCCACACGCCCTGGCTCTCCGTaGAGAAGCCCATGTCCATGCCCTCCTGCCCCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: SSGKIPTRPGSP*RSPCPCPPAPR Trigger: TCGAGGGGCAGGAGGGCATGGACATGGGCTTCTTCACGGAGAGCCAGGGCGTGTGGGGATCTTGCCAGAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | GCCCTCCTGCCCCTCGACGAGGGGGACGAGTTCAGGTaGATCCAGGGCAAAGCACGTGCATCACAGGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: ALLPLDEGDEFR*IQGKARASQDQ Trigger: TTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGAACTCGTCCCCCTCGTCGAGGGGCAGGAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR CCA 72 bp | CACTGGCGCTGGAACACGAGCTGCTCAGCTCAGCTCTaGCAAGATCCCCACACGCCCTGGCTCTCCGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HWRWNTSCSAQL*QDPHTPWLSVK Trigger: CTTCACGGAGAGCCAGGGCGTGTGGGGATCTTGCCAGAGCTGAGCTGAGCAGCTCGTGTTCCAGCGCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | GACCATCATGCAGCAAGGGACGGGAGATGGATCTGCTaGCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: DHHAARDGRWIC*PRVPQCLQEGQ Trigger: TTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGCAGCAGATCCATCTCCCGTCCCTTGCTGCATGATGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | AGTGACCATCATGCAGCAAGGGACGGGAGATGGATCTaGTGCCCTCGAGTCCCACAGTGCCTGCAGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SDHHAARDGRWI*CPRVPQCLQEG Trigger: ACCCTCCTGCAGGCACTGTGGGACTCGAGGGCAGCAGATCCATCTCCCGTCCCTTGCTGCATGATGGTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | GGAGATGGATCTGCTGCCCTCGAGTCCCACAGTGCCTaGAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: GDGSAALESHSA*RRVKTQEAGFL Trigger: TAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGCAGCAGATCCATCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCAGTCTGGAACACTGCTaGAGAGAACACTGTCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALESHSACRRVKTQEAGFSLEHC*REHCLG Trigger: CCCCAGACAGTGTTCTCTCAAGCAGTGTTCCAGACT...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | CGTGACTACACCCCACATATGAGGGCAAGCCAGTGCTaGTGGGGTCAGAGGTCTCTAGTAGCCCACTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: RDYTPHMRASQC*WGQRSLVAHSD Trigger: GTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCATATGTGGGGTGTAGTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR CCA 72 bp | AACAAGAACCACAGCAAACCTCGGCCCCACTGGCGCTaGAACACGAGCTGCTCAGCTCAGCTCTGGCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: NKNHSKPRPHWR*NTSCSAQLWQD Trigger: ATCTTGCCAGAGCTGAGCTGAGCAGCTCGTGTTCCAGCGCCAGTGGGGCCGAGGTTTGCTGTGGTTCTTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | AGCAAGGAACAGCTGAGGACTGGGCCCAGATGTGTCTaGAGTCCCCTAAACTTCAGCCCACAACTCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SKEQLRTGPRCV*SPLNFSPQLPS Trigger: GGAAGGGAGTTGTGGGCTGAAGTTTAGGGGACTGCAGACACATCTGGGCCCAGTCCTCAGCTGTTCCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTGGGGACTTCCTCTCCCTAAGGCTGGCCCTGAACTaGAGATTCTCCTGCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IWPQDGSCPKHFGDFLSLRLALN*RFSCLS Trigger: GCTGAGGCAGGAGAATCTCAAGTTCAGGGCCAGCCT...TAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | ATGTGGCCCAGGCTGGCCCTGAACTTGAGATTCTCCTaGCTCAGCCTCCAAAGGGCTGCTCTTACATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: MWPRLALNLRFS*LSLQRAALTCI Trigger: AATGCATGTAAGAGCAGCCCTTTGGAGGCTGAGGCAGGAGAATCTCAAGTTCAGGGCCAGCCTGGGCCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR CCA 72 bp | GACTACACCCCACATATGAGGGCAAGCCAGTGCTGCTaGGGTCAGAGGTCTCTAGTAGCCCACTCTGACATT | + |
|
Preference number: 3 (lower is better) Translates to: DYTPHMRASQCC*GQRSLVAHSDI Trigger: AATGTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCATATGTGGGGTGTAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGGAGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTAGGCTGGCCCTGAACTaGAGATTCTCCTGCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TQEAGFLCTAKNTTEIPGRLALN*RFSCLS Trigger: GCTGAGGCAGGAGAATCTCAAGTTCAGGGCCAGCCT...ACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | GTGCTGCTGGGGTCAGAGGTCTCTAGTAGCCCACTCTaGCATTCCACTTCTGAGGTATACCAGCAAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: VLLGSEVSSSPL*HSTSEVYQQGT Trigger: TGTTCCTTGCTGGTATACCTCAGAAGTGGAATGTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR CCA 72 bp | CAGCCACCGACATGTAAAAGCCACCAGAGGGAACAGTaGCTTCTGAAACGCAGTGTCCTGACAAAGGTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QPPTCKSHQREQ*LLKRSVLTKVQ Trigger: TTGCACCTTTGTCAGGACACTGCGTTTCAGAAGCCACTGTTCCCTCTGGTGGCTTTTACATGTCGGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR CCA 72 bp | TATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTaGGGACTTCCTCTCCCTAGGTCTTGTGATGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: YLASGWVMSQAF*GLPLPRSCDGP Trigger: AGGACCATCACAAGACCTAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR CCA 72 bp | CCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTaGGTTCCTATGCACTGCCAAGAACACAACAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PQCLQEGQNTGG*VPMHCQEHNRN Trigger: ATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | ACAGATCCCAGCCACTGCCTGTCATTAACACAAGGATaGCTAAGAGGAACACAGCCGACAGACCAGCGAACA | + |
|
Preference number: 3 (lower is better) Translates to: TDPSHCLSLTQG*LRGTQPTDQRT Trigger: TGTTCGCTGGTCTGTCGGCTGTGTTCCTCTTAGTCATCCTTGTGTTAATGACAGGCAGTGGCTGGGATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | GATCTGAAACAAGCAATTCCCAGGAAGTCACTGACGTaGCTACACCCCACATATGAGGGCAAGCCAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DLKQAIPRKSLT*LHPTYEGKPVL Trigger: CAGCACTGGCTTGCCCTCATATGTGGGGTGTAGTCACGTCAGTGACTTCCTGGGAATTGCTTGTTTCAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | GGGGGACGAGTTCAGGTGCATCCAGGGCAAAGCACGTaGATCACAGGACCAATTTCCAGATCAGTGTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: GGRVQVHPGQST*ITGPISRSVFI Trigger: TATAAACACTGATCTGGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGAACTCGTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | TGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATaGACTGCCAAGAACACAACAGAAATACCAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CRRVKTQEAGFL*TAKNTTEIPGS Trigger: GGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCACTGCCAGTAATTTTTCTCCCTTaGAGAGACAGGGTATCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TVPAGGSKHRRLGSYALPVIFLP*RDRVSV Trigger: TACTGATACCCTGTCTCTCAAAGGGAGAAAAATTAC...TGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | GAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCACTaGCAAGAACACAACAGAAATACCAGGTTCCAAACG | + |
|
Preference number: 3 (lower is better) Translates to: EGQNTGGWVPMH*QEHNRNTRFQT Trigger: CGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR CCA 72 bp | ATTGCAAGATCATGTATTCACAGAGTGGCCAGGCCCTaGCCGATTCAGCAGGCAATGATCATGGTTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: IARSCIHRVARP*PIQQAMIMVLG Trigger: ACCAAGAACCATGATCATTGCCTGCTGAATCGGCCAGGGCCTGGCCACTCTGTGAATACATGATCTTGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | AGTGTAGACACGGAACTCTGCTCTTCACTACAGAAATaGCTCGGGGACCTGACCTTTTACCTAGGAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: SVDTELCSSLQK*LGDLTFYLGET Trigger: TGTCTCTCCTAGGTAAAAGGTCAGGTCCCCGAGTCATTTCTGTAGTGAAGAGCAGAGTTCCGTGTCTACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | ATTTATCTTCACACCCAACAAGTCTGGAACACTGCTTaGGAGAACACTGTCTGGGGATTGTTAAGGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IYLHTQQVWNTA*ENTVWGLLRQG Trigger: GCCTTGCCTTAACAATCCCCAGACAGTGTTCTCTCAAGCAGTGTTCCAGACTTGTTGGGTGTGAAGATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | CATTCTTCTCGTGTCTCACTCAGTAACAGCTTAATCTaGAGTTTGGTGGTCCGGATGACACACTTATACCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSSRVSLSNSLI*SLVVRMTHLYQ Trigger: CTGGTATAAGTGTGTCATCCGGACCACCAAACTTCAGATTAAGCTGTTACTGAGTGAGACACGAGAAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | CCATCCTCCATCTGTCTACCTGCTACGGTGAATATCTaGATTTTAAAGTATGTATCTGGCCTCAGGATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PSSICLPATVNI*ILKYVSGLRMG Trigger: ACCCATCCTGAGGCCAGATACATACTTTAAAATTCAGATATTCACCGTAGCAGGTAGACAGATGGAGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | ATGCATTTATCTTCACACCCAACAAGTCTGGAACACTaGTTGAGAGAACACTGTCTGGGGATTGTTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: MHLSSHPTSLEH*LREHCLGIVKA Trigger: TGCCTTAACAATCCCCAGACAGTGTTCTCTCAAGCAGTGTTCCAGACTTGTTGGGTGTGAAGATAAATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR GCA 72 bp | CAACTCCCTTCCCCAGCCATCCTCCATCTGTCTACCTaGTACGGTGAATATCTGAATTTTAAAGTATGTATC | + |
|
Preference number: 3 (lower is better) Translates to: QLPSPAILHLST*YGEYLNFKVCI Trigger: GATACATACTTTAAAATTCAGATATTCACCGTAGCAGGTAGACAGATGGAGGATGGCTGGGGAAGGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGATTCAAGTCATACCATACGGTGAGAGACAAAAGGAAAGAGATCAATATAAAATCCTTCCAGTTTaGACTAGCAAGCCATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLIQVIPYGERQKERDQYKILPV*TSKPSE Trigger: CTCTGATGGCTTGCTAGTCAAAACTGGAAGGATTTT...ATATTGATCTCTTTCCTTTTGTCTCTCACCGTATGGTATGACTTGAATCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| 3UTR TCA 72 bp | GCCAAGAACACAACAGAAATACCAGGTTCCAAACGATaGGAACTTACACATAGAATCAAAACTGATTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AKNTTEIPGSKR*ELTHRIKTDSS Trigger: ACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCGACTCCTCCAGGGACTaGGGCGGCTGGGTAGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALESHSACRRVKTQEAGFDSSRD*GGWVDD Trigger: ATCGTCTACCCAGCCGCCCCAGTCCCTGGAGGAGTC...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCGCCCGACGGTCATGGTaGTCTCTGGTGTGGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ALESHSACRRVKTQEAGFARRSW*SLVWWY Trigger: ATACCACCACACCAGAGAGCACCATGACCGTCGGGC...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | ATGAGGGCAAGCCAGTGCTGCTGGGGTCAGAGGTCTCTAGTAGCCCACTCTGACAGAAGTAGCCCAGGGTaGGGAAGGCGATGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: MRASQCCWGQRSLVAHSDRSSPG*GRRWPW Trigger: CCATGGCCATCGCCTTCCTCACCCTGGGCTACTTCT...GTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | AGTGGCCAGGCCCTGGCCGATTCAGCAGGCAATGATCATGGTTCTTGGTCTCTCAGGGCGGCCGGCTGCTaGTGTACAGCTTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGQALADSAGNDHGSWSLRAAGC*CTASGS Trigger: AGAACCTGAAGCTGTACATCAGCAGCCGGCCGCCCT...GAGAGACCAAGAACCATGATCATTGCCTGCTGAATCGGCCAGGGCCTGGCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | ACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCACTGCCAACCGCCTGCTCACAGTaGCCATGGAGGGCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVPAGGSKHRRLGSYALPTACSQ*PWRAQS Trigger: TGACTGTGCCCTCCATGGCCACTGTGAGCAGGCGGT...TGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | AGGTCTTGTGATGGTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTGTGGGCTTCCCTGCCTaGCAATCCAATCTGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSCDGPPSHPLQIPATACVGFPA*QSNLMP Trigger: GGGCATCAGATTGGATTGTCAGGCAGGGAAGCCCAC...ACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGACCATCACAAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | ACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTATGCACTGCCAACCAGAGCGTGGCGTTaGTGTATGTGTCGGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: TVPAGGSKHRRLGSYALPTRAWR*CMCRGY Trigger: GTATCCCCGACACATACAGCAACGCCACGCTCTGGT...TGGCAGTGCATAGGAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGCATCCAGGGCAAAGCACGTGCATCACAGGACCAATTTCCAGATCAGTAGAAGTAGCCCAGGGTaGGGAAGGCGATGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SGASRAKHVHHRTNFQISRSSPG*GRRWPW Trigger: CCATGGCCATCGCCTTCCTCACCCTGGGCTACTTCT...ACTGATCTGGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGCATCCAGGGCAAAGCACGTGCATCACAGGACCAATTTCCAGATCAGTTGCTCACAGTGGCCATaGAGGGCACAGTCATCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGASRAKHVHHRTNFQISCSQWP*RAQSSA Trigger: CGCCGATGACTGTGCCCTCCATGGCCACTGTGAGCA...ACTGATCTGGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGCATCCAGGGCAAAGCACGTGCATCACAGGACCAATTTCCAGATCAGTAATATTGATGGGGCCTaGCTCCTCCAGGGACTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGASRAKHVHHRTNFQISNIDGA*LLQGLG Trigger: CCCCAGTCCCTGGAGGAGTCAGGCCCCATCAATATT...ACTGATCTGGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | GTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTCATTAACACAAGGTGGCCACTGAAATATTaGTGGGGCCTGACTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLPTLYRSQPLPVINTRWPLKY*WGLTPP Trigger: TGGAGGAGTCAGGCCCCATCAATATTTCAGTGGCCA...CCTTGTGTTAATGACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | AACAGCTTCCAGCACTCAGCACGCCAGTCTGAAACAAGAACCACAGCAAACCTCGTGGGCTTCCCTGCCTaGCAATCCAATCTGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NSFQHSARQSETRTTANLVGFPA*QSNLMP Trigger: GGGCATCAGATTGGATTGTCAGGCAGGGAAGCCCAC...GAGGTTTGCTGTGGTTCTTGTTTCAGACTGGCGTGCTGAGTGCTGGAAGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | AGTGGCCAGGCCCTGGCCGATTCAGCAGGCAATGATCATGGTTCTTGGTCTCTCCATCTCTGGCAGTTGTaGAGATCTTGTACCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGQALADSAGNDHGSWSLHLWQL*RSCTRA Trigger: CGCTCTGGTACAAGATCTTCACAACTGCCAGAGATG...GAGAGACCAAGAACCATGATCATTGCCTGCTGAATCGGCCAGGGCCTGGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGACTCCTCCAGGGACTaGGGCGGCTGGGTAGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLGSYALPRTQQKYQVPNDSSRD*GGWVDD Trigger: ATCGTCTACCCAGCCGCCCCAGTCCCTGGAGGAGTC...GTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | ACACAGGAGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTACCGCCTGCTCACAGTaGCCATGGAGGGCACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQEAGFLCTAKNTTEIPGTACSQ*PWRAQS Trigger: TGACTGTGCCCTCCATGGCCACTGTGAGCAGGCGGT...ACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCCTGGAACAACAACAGTaGGTTTGGGATTTAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALESHSACRRVKTQEAGFLEQQQ*VWDLKH Trigger: ATGCTTTAAATCCCAAACTCACTGTTGTTGTTCCAG...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGCAAGCCAGTGCTGCTGGGGTCAGAGGTCTCTAGTAGCCCACTCTGACCTGGTGTGCATGAGATaGAGGTTTATTAATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MRASQCCWGQRSLVAHSDLVCMR*RFINER Trigger: CCGCTCATTAATAAACCTGCATCTCATGCACACCAG...GTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | GTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTCATTAACACAAGGATGTTGATCTCCTCGTaGGCTTCCCTGCCTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLPTLYRSQPLPVINTRMLISS*ASLPDN Trigger: ATTGTCAGGCAGGGAAGCCCACGAGGAGATCAACAT...CCTTGTGTTAATGACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | ATGAGGGCAAGCCAGTGCTGCTGGGGTCAGAGGTCTCTAGTAGCCCACTCTGACGGTAGACTTTCCCAATaGCACCCTTATAACACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MRASQCCWGQRSLVAHSDGRLSQ*HPYNTR Trigger: TCTGGTGTTATAAGGGTGCCATTGGGAAAGTCTACC...GTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGGGTCATGCATGCTGTaGACACCGCCTGCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLGSYALPRTQQKYQVPNGSCML*TPPAHS Trigger: ACTGTGAGCAGGCGGTGTTCACAGCATGCATGACCC...GTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | ACAGAAAATCAATGGGGGAAGGGACGCCATCACAGATCAGCTAGTGACCATCATGCCCGACGGTCATGGTaGTCTCTGGTGTGGTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TENQWGKGRHHRSASDHHARRSW*SLVWWY Trigger: ATACCACCACACCAGAGAGCACCATGACCGTCGGGC...ATGATGGTCACTAGCTGATCTGTGATGGCGTCCCTTCCCCCATTGATTTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | TCCACTTCTGAGGTATACCAGCAAGGAACAGCTGAGGACTGGGCCCAGATGTGTGGCAAAATTCAGGATTaGTCTGCCGCAGTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STSEVYQQGTAEDWAQMCGKIQD*SAAVCW Trigger: CCAGCAAACTGCGGCAGAGCAATCCTGAATTTTGCC...ACACATCTGGGCCCAGTCCTCAGCTGTTCCTTGCTGGTATACCTCAGAAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | ACACAGGAGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTGGCCACTGAAATATTaGTGGGGCCTGACTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQEAGFLCTAKNTTEIPGWPLKY*WGLTPP Trigger: TGGAGGAGTCAGGCCCCATCAATATTTCAGTGGCCA...ACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | ACACAGGAGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTCATCTCTGGCAGTTGTaGAGATCTTGTACCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TQEAGFLCTAKNTTEIPGHLWQL*RSCTRA Trigger: CGCTCTGGTACAAGATCTTCACAACTGCCAGAGATG...ACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGACCAGAGCGTGGCGTTaGTGTATGTGTCGGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMTRAWR*CMCRGY Trigger: GTATCCCCGACACATACAGCAACGCCACGCTCTGGT...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | ATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTGGGGACTTCCTCTCCCTACTGGTGTGCATGAGATaGAGGTTTATTAATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IWPQDGSCPKHFGDFLSLLVCMR*RFINER Trigger: CCGCTCATTAATAAACCTGCATCTCATGCACACCAG...TAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGGGGGATACAGTGAGGTaGCTGAACAGTGACGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMGDTVR*LNSDGE Trigger: TTCCCCGTCACTGTTCAGCCACCTCACTGTATCCCC...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | CTTCAATTGAGACAGATCTACAGTTACAGGACAAAAGTGCTGACATACCTAAGTGGGTCATGCATGCTGTaGACACCGCCTGCTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLRQIYSYRTKVLTYLSGSCML*TPPAHS Trigger: ACTGTGAGCAGGCGGTGTTCACAGCATGCATGACCC...ACTTAGGTATGTCAGCACTTTTGTCCTGTAACTGTAGATCTGTCTCAATTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | ACACAGGAGGCTGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTGTATCGTTGGAGAGATaGTTCAGTGTCTCGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQEAGFLCTAKNTTEIPGVSLER*FSVSFS Trigger: AGAAAACGAGACACTGAAGCATCTCTCCAACGATAC...ACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCAGCCTCCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | AAACTGATTCAAGTCATACCATACGGTGAGAGACAAAAGGAAAGAGATCAATATAGGGCGGCCGGCTGCTaGTGTACAGCTTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLIQVIPYGERQKERDQYRAAGC*CTASGS Trigger: AGAACCTGAAGCTGTACATCAGCAGCCGGCCGCCCT...ATATTGATCTCTTTCCTTTTGTCTCTCACCGTATGGTATGACTTGAATCAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR TCA 90 bp | TGGGTTCCTATGCACTGCCAAGAACACAACAGAAATACCAGGTTCCAAACGATGCTGGAACAACAACAGTaGGTTTGGGATTTAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WVPMHCQEHNRNTRFQTMLEQQQ*VWDLKH Trigger: ATGCTTTAAATCCCAAACTCACTGTTGTTGTTCCAG...CATCGTTTGGAACCTGGTATTTCTGTTGTGTTCTTGGCAGTGCATAGGAACCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | CTTCAATTGAGACAGATCTACAGTTACAGGACAAAAGTGCTGACATACCTAAGTGGCAAAATTCAGGATTaGTCTGCCGCAGTTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQLRQIYSYRTKVLTYLSGKIQD*SAAVCW Trigger: CCAGCAAACTGCGGCAGAGCAATCCTGAATTTTGCC...ACTTAGGTATGTCAGCACTTTTGTCCTGTAACTGTAGATCTGTCTCAATTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTGGGGATACAGTGAGGTaGCTGAACAGTGACGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NDENLHIESKLIQVIPYGGDTVR*LNSDGE Trigger: TTCCCCGTCACTGTTCAGCCACCTCACTGTATCCCC...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | AAACTGATTCAAGTCATACCATACGGTGAGAGACAAAAGGAAAGAGATCAATATCCTCGTGGGCTTCCCTaGCTGACAATCCAATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLIQVIPYGERQKERDQYPRGLP*LTIQSD Trigger: ATCAGATTGGATTGTCAGGCAGGGAAGCCCACGAGG...ATATTGATCTCTTTCCTTTTGTCTCTCACCGTATGGTATGACTTGAATCAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CCA 90 bp | AACGATGAGAACTTACACATAGAATCAAAACTGATTCAAGTCATACCATACGGTATGTTGATCTCCTCGTaGGCTTCCCTGCCTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NDENLHIESKLIQVIPYGMLISS*ASLPDN Trigger: ATTGTCAGGCAGGGAAGCCCACGAGGAGATCAACAT...ACCGTATGGTATGACTTGAATCAGTTTTGATTCTATGTGTAAGTTCTCATCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR GCA 90 bp | AAACTGATTCAAGTCATACCATACGGTGAGAGACAAAAGGAAAGAGATCAATATGTATCGTTGGAGAGATaGTTCAGTGTCTCGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLIQVIPYGERQKERDQYVSLER*FSVSFS Trigger: AGAAAACGAGACACTGAAGCATCTCTCCAACGATAC...ATATTGATCTCTTTCCTTTTGTCTCTCACCGTATGGTATGACTTGAATCAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS GCA 90 bp | CCTGACTCCTCCAGGGACTGGGGCGGCTGGGTAGACGATCTGGCCTaGCCGACGGTCATGGTGCTCTCTGGTGTGGTGGTATCGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PDSSRDWGGWVDDLA*PTVMVLSGVVVSLE Trigger: CTCCAACGATACCACCACACCAGAGAGCACCATGACCGTCGGGCAGGCCAGATCGTCTACCCAGCCGCCCCAGTCCCTGGAGGAGTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 ENSMUST00000202305.4 |
||
| CDS-3UTR CAA 90 bp | GCCCTCGAGTCCCACAGTGCCTGCAGGAGGGTCAAAACACAGGAGGCTGGGTTCATGGCCACTGAAATATaGATGGGGCCTGACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALESHSACRRVKTQEAGFMATEI*MGPDSS Trigger: GGAGGAGTCAGGCCCCATCAATATTTCAGTGGCCAT...GAACCCAGCCTCCTGTGTTTTGACCCTCCTGCAGGCACTGTGGGACTCGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | ATGAGGGCAAGCCAGTGCTGCTGGGGTCAGAGGTCTCTAGTAGCCCACTCTGACAGGGTGAAGGTGATGTaGATCTCCTCGTGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MRASQCCWGQRSLVAHSDRVKVM*ISSWAS Trigger: GGAAGCCCACGAGGAGATCAACATCACCTTCACCCT...GTCAGAGTGGGCTACTAGAGACCTCTGACCCCAGCAGCACTGGCTTGCCCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | AGTGGCCAGGCCCTGGCCGATTCAGCAGGCAATGATCATGGTTCTTGGTCTCTCATGGCCACTGAAATATaGATGGGGCCTGACTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGQALADSAGNDHGSWSLMATEI*MGPDSS Trigger: GGAGGAGTCAGGCCCCATCAATATTTCAGTGGCCAT...GAGAGACCAAGAACCATGATCATTGCCTGCTGAATCGGCCAGGGCCTGGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | GTCCTCCTTCCCACCCTCTACAGATCCCAGCCACTGCCTGTCATTAACACAAGGGGGCAAAATTCAGGATaGCTCTGCCGCAGTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLPTLYRSQPLPVINTRGQNSG*LCRSLL Trigger: CAGCAAACTGCGGCAGAGCAATCCTGAATTTTGCCC...CCTTGTGTTAATGACAGGCAGTGGCTGGGATCTGTAGAGGGTGGGAAGGAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGCATCCAGGGCAAAGCACGTGCATCACAGGACCAATTTCCAGATCAGTAGGGTGAAGGTGATGTaGATCTCCTCGTGGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGASRAKHVHHRTNFQISRVKVM*ISSWAS Trigger: GGAAGCCCACGAGGAGATCAACATCACCTTCACCCT...ACTGATCTGGAAATTGGTCCTGTGATGCACGTGCTTTGCCCTGGATGCACCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | TCCACTTCTGAGGTATACCAGCAAGGAACAGCTGAGGACTGGGCCCAGATGTGTGCAGTTGTGAAGATCTaGTACCAGAGCGTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STSEVYQQGTAEDWAQMCAVVKI*YQSVAL Trigger: CAACGCCACGCTCTGGTACAAGATCTTCACAACTGC...ACACATCTGGGCCCAGTCCTCAGCTGTTCCTTGCTGGTATACCTCAGAAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | ATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTGGGGACTTCCTCTCCCTAGGGCAAAATTCAGGATaGCTCTGCCGCAGTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IWPQDGSCPKHFGDFLSLGQNSG*LCRSLL Trigger: CAGCAAACTGCGGCAGAGCAATCCTGAATTTTGCCC...TAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | ATCTGGCCTCAGGATGGGTCATGTCCCAAGCATTTTGGGGACTTCCTCTCCCTAGAAAGGATTGTAGTCTaGAGCATATTTCGTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IWPQDGSCPKHFGDFLSLERIVV*SIFRVG Trigger: GCCAACACGAAATATGCTCAAGACTACAATCCTTTC...TAGGGAGAGGAAGTCCCCAAAATGCTTGGGACATGACCCATCCTGAGGCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS-3UTR CAA 90 bp | ACAGAAAATCAATGGGGGAAGGGACGCCATCACAGATCAGCTAGTGACCATCATGAAAGGATTGTAGTCTaGAGCATATTTCGTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TENQWGKGRHHRSASDHHERIVV*SIFRVG Trigger: GCCAACACGAAATATGCTCAAGACTACAATCCTTTC...ATGATGGTCACTAGCTGATCTGTGATGGCGTCCCTTCCCCCATTGATTTTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
||
| CDS CCA 72 bp | TTGATGGGGCCTGACTCCTCCAGGGACTGGGGCGGCTaGGTAGACGATCTGGCCTGCCCGACGGTCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LMGPDSSRDWGG*VDDLACPTVMV Trigger: CACCATGACCGTCGGGCAGGCCAGATCGTCTACCCAGCCGCCCCAGTCCCTGGAGGAGTCAGGCCCCATCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 ENSMUST00000202305.4 |
||
| CDS GCA 72 bp | TCCAGGGACTGGGGCGGCTGGGTAGACGATCTGGCCTaGCCGACGGTCATGGTGCTCTCTGGTGTGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: SRDWGGWVDDLA*PTVMVLSGVVV Trigger: TACCACCACACCAGAGAGCACCATGACCGTCGGGCAGGCCAGATCGTCTACCCAGCCGCCCCAGTCCCTGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 ENSMUST00000200802.4 ENSMUST00000202305.4 |
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| CDS CAA 90 bp | AAGGGCTTGAGAGGGTCCAAGGTCAAGGTAATGGCCACTGAAATATaGATGGGGCCTGACTCCTCCAGGGACTGGGGCGGCTGGGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: KGLRGSKVKVMATEI*MGPDSSRDWGGWVD Trigger: GTCTACCCAGCCGCCCCAGTCCCTGGAGGAGTCAGGCCCCATCAATATTTCAGTGGCCATTACCTTGACCTTGGACCCTCTCAAGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 ENSMUST00000202305.4 |
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| CDS TCA 72 bp | ATCTCCTCGTGGGCTTCCCTGCCTGACAATCCAATCTaGTGCCCGAGGATGGTGGAGTACAGGTGTGTAACA | + |
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Preference number: 6 (lower is better) Translates to: ISSWASLPDNPI*CPRMVEYRCVT Trigger: TGTTACACACCTGTACTCCACCATCCTCGGGCATCAGATTGGATTGTCAGGCAGGGAAGCCCACGAGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| CDS CAA 72 bp | AGGTGTGTAACATTTCGAGAGTACCCTCCAAAGGGCTaGAGAGGGTCCAAGGTCAAGGTAATGGCCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: RCVTFREYPPKG*RGSKVKVMATE Trigger: TTCAGTGGCCATTACCTTGACCTTGGACCCTCTCAAGCCCTTTGGAGGGTACTCTCGAAATGTTACACACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 ENSMUST00000202305.4 |
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| CDS TCA 72 bp | CTTGAGCATATTTCGTGTTGGCATCTCTGGCAGTTGTaGAGATCTTGTACCAGAGCGTGGCGTTGCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: LEHISCWHLWQL*RSCTRAWRCCM Trigger: CATACAGCAACGCCACGCTCTGGTACAAGATCTTCACAACTGCCAGAGATGCCAACACGAAATATGCTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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| CDS GCA 72 bp | ATGGTGCTCTCTGGTGTGGTGGTATCGTTGGAGAGATaGTTCAGTGTCTCGTTTTCTGATACACACAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: MVLSGVVVSLER*FSVSFSDTHKS Trigger: GGACTTGTGTGTATCAGAAAACGAGACACTGAAGCATCTCTCCAACGATACCACCACACCAGAGAGCACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 ENSMUST00000200802.4 ENSMUST00000202305.4 |
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| CDS CAA 90 bp | GTGGAGTACAGGTGTGTAACATTTCGAGAGTACCCTCCAAAGGGCTaGAGAGGGTCCAAGGTCAAGGTAATGGCCACTGAAATATTGATG | + |
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Preference number: 6 (lower is better) Translates to: VEYRCVTFREYPPKG*RGSKVKVMATEILM Trigger: CATCAATATTTCAGTGGCCATTACCTTGACCTTGGACCCTCTCAAGCCCTTTGGAGGGTACTCTCGAAATGTTACACACCTGTACTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 ENSMUST00000202305.4 |
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| CDS TCA 72 bp | TTATTAATGAGCGGTCGTCATCTGGAACAACAACAGTaGGTTTGGGATTTAAAGCATGGTAGACTTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: LLMSGRHLEQQQ*VWDLKHGRLSQ Trigger: TTGGGAAAGTCTACCATGCTTTAAATCCCAAACTCACTGTTGTTGTTCCAGATGACGACCGCTCATTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065329.13 ENSMUST00000111298.6 |
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