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Pregenerated sensors for TMEM247 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037689

Ensembl transcript IDs: ENSMUST00000042172.7, ENSMUST00000202221.2

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCTTGCCTTCAGGCATGCTGTCAACAGGGGCCACCTTGGAGAGTGTaGGGCAGCTTTCTCCTGCCCCTCGGGCTTCCATCACCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: ACLQACCQQGPPWRV*GSFLLPLGLPSPPC
Trigger: ACAGGGAGGTGATGGAAGCCCGAGGGGCAGGAGAAAGCTGCCCCACACTCTCCAAGGTGGCCCCTGTTGACAGCATGCCTGAAGGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS GCA 90 bp GCGTCAGTTCAAACTCCATGCGCACCTTCTCCAGCTCCATCGCGTTaGGGTGTTCTGTCTCCAGGGGCAGGGGCAGCTCTACGGACTCCA +
Preference number: 5 (lower is better)
Translates to: ASVQTPCAPSPAPSR*GVLSPGAGAALRTP
Trigger: TGGAGTCCGTAGAGCTGCCCCTGCCCCTGGAGACAGAACACCGCAACGCGATGGAGCTGGAGAAGGTGCGCATGGAGTTTGAACTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGCAGCTGCTCCATCACTTCCTCATGCTaGCTCTGCCGCTCGTTCTCCTGGTGCAGGTACTTGAGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCSCSITSSC*LCRSFSWCRYLRSV
Trigger: GACGCTCCTCAAGTACCTGCACCAGGAGAACGAGCGGCAGAGGCAGCATGAGGAAGTGATGGAGCAGCTGCAACAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042172.7
ENSMUST00000202221.2
CDS TCA 90 bp CTTCCTCATGCTGCCTCTGCCGCTCGTTCTCCTGGTGCAGGTACTTaGGGAGCGTCAGTTCAAACTCCATGCGCACCTTCTCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LPHAASAARSPGAGT*GASVQTPCAPSPAP
Trigger: TGGAGCTGGAGAAGGTGCGCATGGAGTTTGAACTGACGCTCCTCAAGTACCTGCACCAGGAGAACGAGCGGCAGAGGCAGCATGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042172.7
ENSMUST00000202221.2
CDS CCA 72 bp CAGGCATGCTGTCAACAGGGGCCACCTTGGAGAGTGTaGGGCAGCTTTCTCCTGCCCCTCGGGCTTCCATCA +
Preference number: 6 (lower is better)
Translates to: QACCQQGPPWRV*GSFLLPLGLPS
Trigger: TGATGGAAGCCCGAGGGGCAGGAGAAAGCTGCCCCACACTCTCCAAGGTGGCCCCTGTTGACAGCATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS CAA 90 bp AGCGTCAGTTCAAACTCCATGCGCACCTTCTCCAGCTCCATCGCGTaGCGGTGTTCTGTCTCCAGGGGCAGGGGCAGCTCTACGGACTCC +
Preference number: 6 (lower is better)
Translates to: SVSSNSMRTFSSSIA*RCSVSRGRGSSTDS
Trigger: GGAGTCCGTAGAGCTGCCCCTGCCCCTGGAGACAGAACACCGCAACGCGATGGAGCTGGAGAAGGTGCGCATGGAGTTTGAACTGACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS GCA 72 bp CAAACTCCATGCGCACCTTCTCCAGCTCCATCGCGTTaGGGTGTTCTGTCTCCAGGGGCAGGGGCAGCTCTA +
Preference number: 6 (lower is better)
Translates to: QTPCAPSPAPSR*GVLSPGAGAAL
Trigger: TAGAGCTGCCCCTGCCCCTGGAGACAGAACACCGCAACGCGATGGAGCTGGAGAAGGTGCGCATGGAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS CAA 72 bp TCAAACTCCATGCGCACCTTCTCCAGCTCCATCGCGTaGCGGTGTTCTGTCTCCAGGGGCAGGGGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SNSMRTFSSSIA*RCSVSRGRGSS
Trigger: AGAGCTGCCCCTGCCCCTGGAGACAGAACACCGCAACGCGATGGAGCTGGAGAAGGTGCGCATGGAGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS CAA 90 bp ACTTCCTCATGCTGCCTCTGCCGCTCGTTCTCCTGGTGCAGGTACTaGAGGAGCGTCAGTTCAAACTCCATGCGCACCTTCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TSSCCLCRSFSWCRY*RSVSSNSMRTFSSS
Trigger: GGAGCTGGAGAAGGTGCGCATGGAGTTTGAACTGACGCTCCTCAAGTACCTGCACCAGGAGAACGAGCGGCAGAGGCAGCATGAGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042172.7
ENSMUST00000202221.2
CDS GCA 72 bp GTTTGGGGACTTCTGCATCCAAAGAGGCCTTTGGCTTaGCTTCAGGCATGCTGTCAACAGGGGCCACCTTGG +
Preference number: 6 (lower is better)
Translates to: VWGLLHPKRPLA*LQACCQQGPPW
Trigger: CCAAGGTGGCCCCTGTTGACAGCATGCCTGAAGGCAAGCCAAAGGCCTCTTTGGATGCAGAAGTCCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS CAA 90 bp GGCAGTTCTAGTTTGGGGACTTCTGCATCCAAAGAGGCCTTTGGCTaGCCTTCAGGCATGCTGTCAACAGGGGCCACCTTGGAGAGTGTG +
Preference number: 6 (lower is better)
Translates to: GSSSLGTSASKEAFG*PSGMLSTGATLESV
Trigger: CACACTCTCCAAGGTGGCCCCTGTTGACAGCATGCCTGAAGGCAAGCCAAAGGCCTCTTTGGATGCAGAAGTCCCCAAACTAGAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS GCA 72 bp ACTTCCTCATGCTGCCTCTGCCGCTCGTTCTCCTGGTaGAGGTACTTGAGGAGCGTCAGTTCAAACTCCATG +
Preference number: 6 (lower is better)
Translates to: TSSCCLCRSFSW*RYLRSVSSNSM
Trigger: CATGGAGTTTGAACTGACGCTCCTCAAGTACCTGCACCAGGAGAACGAGCGGCAGAGGCAGCATGAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042172.7
ENSMUST00000202221.2
CDS CCA 72 bp ATCACTTCCTCATGCTGCCTCTGCCGCTCGTTCTCCTaGTGCAGGTACTTGAGGAGCGTCAGTTCAAACTCC +
Preference number: 6 (lower is better)
Translates to: ITSSCCLCRSFS*CRYLRSVSSNS
Trigger: GGAGTTTGAACTGACGCTCCTCAAGTACCTGCACCAGGAGAACGAGCGGCAGAGGCAGCATGAGGAAGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042172.7
ENSMUST00000202221.2
CDS CAA 72 bp AGTTTGGGGACTTCTGCATCCAAAGAGGCCTTTGGCTaGCCTTCAGGCATGCTGTCAACAGGGGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: SLGTSASKEAFG*PSGMLSTGATL
Trigger: CAAGGTGGCCCCTGTTGACAGCATGCCTGAAGGCAAGCCAAAGGCCTCTTTGGATGCAGAAGTCCCCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042172.7
CDS CAA 72 bp GTGGATGAAGATGAAGCAGTAGAAGAACATGGCGAATaGGTTCTGGGGGAGCAAGAGGTCCTGGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: VDEDEAVEEHGE*VLGEQEVLEAS
Trigger: GGAAGCCTCCAGGACCTCTTGCTCCCCCAGAACCAATTCGCCATGTTCTTCTACTGCTTCATCTTCATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042172.7
ENSMUST00000202221.2