Pregenerated sensors for TMEM243 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079659Ensembl transcript IDs: ENSMUST00000115365.3, ENSMUST00000196029.5, ENSMUST00000198935.2
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCAAGACAGCTCTCCCAGCCAGGCCTTCAGGCTAGAGGCTGAATaGATGCTCCTGATTTTAACTGCCAGTGGCCACAGCACTTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TQDSSPSQAFRLEAE*MLLILTASGHSTWQ Trigger: CTGCCAAGTGCTGTGGCCACTGGCAGTTAAAATCAGGAGCATCCATTCAGCCTCTAGCCTGAAGGCCTGGCTGGGAGAGCTGTCTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR TCA 90 bp | TTTAACCCAAGACAGCTCTCCCAGCCAGGCCTTCAGGCTAGAGGCTaGATGGATGCTCCTGATTTTAACTGCCAGTGGCCACAGCACTTG | + |
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Preference number: 1 (lower is better) Translates to: FNPRQLSQPGLQARG*MDAPDFNCQWPQHL Trigger: CAAGTGCTGTGGCCACTGGCAGTTAAAATCAGGAGCATCCATTCAGCCTCTAGCCTGAAGGCCTGGCTGGGAGAGCTGTCTTGGGTTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR TCA 90 bp | CTCCTGATTTTAACTGCCAGTGGCCACAGCACTTGGCAGCTTTGGTaGTCTGGTTCAGAGGTAAGCAGTACTGTTAGTCTTCTAGCTCGT | + |
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Preference number: 1 (lower is better) Translates to: LLILTASGHSTWQLW*SGSEVSSTVSLLAR Trigger: ACGAGCTAGAAGACTAACAGTACTGCTTACCTCTGAACCAGATCACCAAAGCTGCCAAGTGCTGTGGCCACTGGCAGTTAAAATCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCTAGAGGCTGAATGGATGCTCCTGATTTTAACTGCCAGTGGCCACAGCACTGCAGCTTTGGTGATCTaGTTCAGAGGTAAGCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: RLEAEWMLLILTASGHSTAALVI*FRGKQY Trigger: GTACTGCTTACCTCTGAACCAGATCACCAAAGCTGC...AGTGCTGTGGCCACTGGCAGTTAAAATCAGGAGCATCCATTCAGCCTCTAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGATTTTAACTGCCAGTGGCCACAGCACTTGGCAGCTTTGGTGATCTGGTTCGAGCCTGAAGATGAATaGGGTCTTCATCCTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PDFNCQWPQHLAALVIWFEPEDE*GLHPCL Trigger: CAAACAAGGATGAAGACCCCATTCATCTTCAGGCTC...GAACCAGATCACCAAAGCTGCCAAGTGCTGTGGCCACTGGCAGTTAAAATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR CAA 90 bp | CTAGTAAGCAGGGTCATCTTGGGTCAGCATGGTAACACAAGCATGTaGTCTAAGCACTTCAAAGGTCTTGTCTTCCAAAGGTATTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LVSRVILGQHGNTSM*SKHFKGLVFQRYFG Trigger: TCCAAAATACCTTTGGAAGACAAGACCTTTGAAGTGCTTAGACAACATGCTTGTGTTACCATGCTGACCCAAGATGACCCTGCTTACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR-3UTR GCA 90 bp | TTTTCAGACTTTCTCACAAAGTATACAGAAGGATTTCCAAGAGTCCAGAGCTGTGCTCCTGATTTTAACTaGCAGTGGCCACAGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: FSDFLTKYTEGFPRVQSCAPDFN*QWPQHL Trigger: CAAGTGCTGTGGCCACTGGCAGTTAAAATCAGGAGC...ACAGCTCTGGACTCTTGGAAATCCTTCTGTATACTTTGTGAGAAAGTCTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR CAA 90 bp | GTCAGCATGGTAACACAAGCATGTTGTCTAAGCACTTCAAAGGTCTaGTCTTCCAAAGGTATTTTGGATTCTGTTTTTCTTCTACCGTCC | + |
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Preference number: 2 (lower is better) Translates to: VSMVTQACCLSTSKV*SSKGILDSVFLLPS Trigger: GGACGGTAGAAGAAAAACAGAATCCAAAATACCTTTGGAAGACAAGACCTTTGAAGTGCTTAGACAACATGCTTGTGTTACCATGCTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR CAA 90 bp | ACATCATGTACCACACGTCTGTCGATGAGTCTTCAGCATACTTTTTaGCAGCAGTTAAATTCACATAGATTTCCAAGAGTCCTGGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: TSCTTRLSMSLQHTF*QQLNSHRFPRVLVS Trigger: ACTTACCAGGACTCTTGGAAATCTATGTGAATTTAACTGCTGCAAAAAAGTATGCTGAAGACTCATCGACAGACGTGTGGTACATGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115365.3 ENSMUST00000198935.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGACTTTCTCACAAAGTATACAGAAGGATTTCCAAGAGTCCAGAGCTGTATCTTTTGCTCTACCTaGATAGGAATCCTGAATAGG | + |
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Preference number: 2 (lower is better) Translates to: FSDFLTKYTEGFPRVQSCIFCST*IGILNR Trigger: CCTATTCAGGATTCCTATCCAGGTAGAGCAAAAGAT...ACAGCTCTGGACTCTTGGAAATCCTTCTGTATACTTTGTGAGAAAGTCTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR CCA 72 bp | AGCTCTCCCAGCCAGGCCTTCAGGCTAGAGGCTGAATaGATGCTCCTGATTTTAACTGCCAGTGGCCACAGC | + |
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Preference number: 3 (lower is better) Translates to: SSPSQAFRLEAE*MLLILTASGHS Trigger: GCTGTGGCCACTGGCAGTTAAAATCAGGAGCATCCATTCAGCCTCTAGCCTGAAGGCCTGGCTGGGAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR TCA 72 bp | AGACAGCTCTCCCAGCCAGGCCTTCAGGCTAGAGGCTaGATGGATGCTCCTGATTTTAACTGCCAGTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: RQLSQPGLQARG*MDAPDFNCQWP Trigger: TGGCCACTGGCAGTTAAAATCAGGAGCATCCATTCAGCCTCTAGCCTGAAGGCCTGGCTGGGAGAGCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR-3UTR CAA 90 bp | AGGCTAGAGGCTGAATGGATGCTCCTGATTTTAACTGCCAGTGGCCACAGCACTAGGGTGTCAGAACCCTaGACTCCACAGCAGTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: RLEAEWMLLILTASGHSTRVSEP*TPQQWL Trigger: TAGCCACTGCTGTGGAGTCAAGGGTTCTGACACCCT...AGTGCTGTGGCCACTGGCAGTTAAAATCAGGAGCATCCATTCAGCCTCTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR CCA 72 bp | AGGGTTAGGGTGTCAGAACCCTTGACTCCACAGCAGTaGCTAGAGCCTGAAGATGAATGGGGTCTTCATCCT | + |
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Preference number: 3 (lower is better) Translates to: RVRVSEPLTPQQ*LEPEDEWGLHP Trigger: AGGATGAAGACCCCATTCATCTTCAGGCTCTAGCCACTGCTGTGGAGTCAAGGGTTCTGACACCCTAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR TCA 72 bp | TTAACTGCCAGTGGCCACAGCACTTGGCAGCTTTGGTaGTCTGGTTCAGAGGTAAGCAGTACTGTTAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LTASGHSTWQLW*SGSEVSSTVSL Trigger: AAGACTAACAGTACTGCTTACCTCTGAACCAGATCACCAAAGCTGCCAAGTGCTGTGGCCACTGGCAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR-3UTR CAA 90 bp | TTTTCAGACTTTCTCACAAAGTATACAGAAGGATTTCCAAGAGTCCAGAGCTGTCAGTGGCCACAGCACTaGGCAGCTTTGGTGATCTGG | + |
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Preference number: 3 (lower is better) Translates to: FSDFLTKYTEGFPRVQSCQWPQH*AALVIW Trigger: CCAGATCACCAAAGCTGCCAAGTGCTGTGGCCACTG...ACAGCTCTGGACTCTTGGAAATCCTTCTGTATACTTTGTGAGAAAGTCTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR GCA 72 bp | ACCTGGATAGGAATCCTGAATAGGCAAAGAGTCTATTaGCAGCAATGCTGGATTCTGGAGTACCCAAGACTT | + |
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Preference number: 3 (lower is better) Translates to: TWIGILNRQRVY*QQCWILEYPRL Trigger: AAGTCTTGGGTACTCCAGAATCCAGCATTGCTGGCAATAGACTCTTTGCCTATTCAGGATTCCTATCCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR CAA 72 bp | GATGCTCCTGATTTTAACTGCCAGTGGCCACAGCACTaGGCAGCTTTGGTGATCTGGTTCAGAGGTAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: DAPDFNCQWPQH*AALVIWFRGKQ Trigger: CTGCTTACCTCTGAACCAGATCACCAAAGCTGCCAAGTGCTGTGGCCACTGGCAGTTAAAATCAGGAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| CDS-3UTR GCA 90 bp | TGTATCCTAGTAAGCAGGGTCATCTTGGGTCAGCATGGTAACACAAGCATGTTGCAGGCCAAAAGAGACTaGTGGGTCCTGAAACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: CILVSRVILGQHGNTSMLQAKRD*WVLKLG Trigger: GCCAAGTTTCAGGACCCAGCAGTCTCTTTTGGCCTG...CAACATGCTTGTGTTACCATGCTGACCCAAGATGACCCTGCTTACTAGGATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| CDS-3UTR CCA 90 bp | CCAAAGGTATTTTGGATTCTGTTTTTCTTCTACCGTCCAGTCCATCGGTTTCCTGCCAAAAGAGACTGCTaGGTCCTGAAACTTGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PKVFWILFFFYRPVHRFPAKRDC*VLKLGR Trigger: TCTGCCAAGTTTCAGGACCCAGCAGTCTCTTTTGGC...AGGAAACCGATGGACTGGACGGTAGAAGAAAAACAGAATCCAAAATACCTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| 3UTR CAA 72 bp | ACCACACGTCTGTCGATGAGTCTTCAGCATACTTTTTaGCAGCAGTTAAATTCACATAGATTTCCAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: TTRLSMSLQHTF*QQLNSHRFPRV Trigger: GACTCTTGGAAATCTATGTGAATTTAACTGCTGCAAAAAAGTATGCTGAAGACTCATCGACAGACGTGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115365.3 ENSMUST00000198935.2 |
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| CDS CCA 90 bp | TATCTGTGTTCCACAGGCCAAAAGAGACTGCTGGGTCCTGAAACTTaGCAGACGTCTCCCCGAACAGAGGTCTGTTATCCAGGCCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: YLCSTGQKRLLGPET*QTSPRTEVCYPGRW Trigger: CCAGCGGCCTGGATAACAGACCTCTGTTCGGGGAGACGTCTGCCAAGTTTCAGGACCCAGCAGTCTCTTTTGGCCTGTGGAACACAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| CDS TCA 90 bp | GCATGTATATCTGTGTTCCACAGGCCAAAAGAGACTGCTGGGTCCTaGAACTTGGCAGACGTCTCCCCGAACAGAGGTCTGTTATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: ACISVFHRPKETAGS*NLADVSPNRGLLSR Trigger: CCTGGATAACAGACCTCTGTTCGGGGAGACGTCTGCCAAGTTTCAGGACCCAGCAGTCTCTTTTGGCCTGTGGAACACAGATATACATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| CDS CCA 90 bp | TTTGCCTGCATGTATATCTGTGTTCCACAGGCCAAAAGAGACTGCTaGGTCCTGAAACTTGGCAGACGTCTCCCCGAACAGAGGTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: FACMYICVPQAKRDC*VLKLGRRLPEQRSV Trigger: AACAGACCTCTGTTCGGGGAGACGTCTGCCAAGTTTCAGGACCCAGCAGTCTCTTTTGGCCTGTGGAACACAGATATACATGCAGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| CDS TCA 72 bp | TCTGTGTTCCACAGGCCAAAAGAGACTGCTGGGTCCTaGAACTTGGCAGACGTCTCCCCGAACAGAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SVFHRPKETAGS*NLADVSPNRGL Trigger: CAGACCTCTGTTCGGGGAGACGTCTGCCAAGTTTCAGGACCCAGCAGTCTCTTTTGGCCTGTGGAACACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| CDS GCA 72 bp | TGCATGTATATCTGTGTTCCACAGGCCAAAAGAGACTaGTGGGTCCTGAAACTTGGCAGACGTCTCCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: CMYICVPQAKRD*WVLKLGRRLPE Trigger: TTCGGGGAGACGTCTGCCAAGTTTCAGGACCCAGCAGTCTCTTTTGGCCTGTGGAACACAGATATACATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196029.5 |
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| CDS CAA 72 bp | AGAATCAACAAGGTGGTTAAGCTGCCAACAACTAAATaGATGATTCGGTCCTTGGCAGACGTCTCCCCGAAC | + |
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Preference number: 6 (lower is better) Translates to: RINKVVKLPTTK*MIRSLADVSPN Trigger: GTTCGGGGAGACGTCTGCCAAGGACCGAATCATCAATTTAGTTGTTGGCAGCTTAACCACCTTGTTGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115365.3 |
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