Pregenerated sensors for TMEM242 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004945Ensembl transcript IDs: ENSMUST00000005053.14, ENSMUST00000185896.2, ENSMUST00000188282.7
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGACCGTGTGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTaGGTTTGCCGGCCATCGGCACGTGTTCCTAGAGAGGAGTCGCCC | + |
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Preference number: 1 (lower is better) Translates to: SDRVPQPQPRRCCGL*VCRPSARVPREESP Trigger: GGGCGACTCCTCTCTAGGAACACGTGCCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACACGGTCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR GCA 90 bp | CGTGTGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTGGGTTTaGCGGCCATCGGCACGTGTTCCTAGAGAGGAGTCGCCCCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: RVPQPQPRRCCGLWV*RPSARVPREESPQS Trigger: AGACTGGGGCGACTCCTCTCTAGGAACACGTGCCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR GCA 90 bp | TTAGGAAAACATTCCGACCGTGTGCCACAGCCACAGCCACGGCGATaGTGTGGCCTCTGGGTTTGCCGGCCATCGGCACGTGTTCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: LGKHSDRVPQPQPRR*CGLWVCRPSARVPR Trigger: TCTAGGAACACGTGCCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACACGGTCGGAATGTTTTCCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR TCA 90 bp | GAGGAAGGTGAACAGGCAACAGTGTCGGTGCAGGAAAGCTGGAGGTaGGCGCAGGCGCACCATGTCTTCCAGTGCCGTGAGCGAAGAATA | + |
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Preference number: 1 (lower is better) Translates to: EEGEQATVSVQESWR*AQAHHVFQCRERRI Trigger: TATTCTTCGCTCACGGCACTGGAAGACATGGTGCGCCTGCGCTCACCTCCAGCTTTCCTGCACCGACACTGTTGCCTGTTCACCTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| 3UTR CCA 90 bp | CGGCACGTGTTCCTAGAGAGGAGTCGCCCCAGTCTTTCTCAGACATaGTGTTTCCAAAGCTGCCATTCCTGCAGCCGTTGCTCCGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: RHVFLERSRPSLSQT*CFQSCHSCSRCSGV Trigger: GACTCCGGAGCAACGGCTGCAGGAATGGCAGCTTTGGAAACACCATGTCTGAGAAAGACTGGGGCGACTCCTCTCTAGGAACACGTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR-3UTR GCA 90 bp | TGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTGGGTTTGCCGGCCATCGGTGGTGTTTCCAAAGCTaGCATTCCTGCAGCCGTTGC | + |
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Preference number: 2 (lower is better) Translates to: CHSHSHGDAVASGFAGHRWCFQS*HSCSRC Trigger: GCAACGGCTGCAGGAATGGCAGCTTTGGAAACACCA...CCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR-3UTR CCA 90 bp | ACCGTGTGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTGGGTTTGCCGGCAGTCTTTCTCAGACATaGTGTTTCCAAAGCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: TVCHSHSHGDAVASGFAGSLSQT*CFQSCH Trigger: ATGGCAGCTTTGGAAACACCATGTCTGAGAAAGACT...GCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACACGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCCTGGAGCCTGATGGCACAGATGGTGGTGAGGCACCCAAAAGAGGGACGCTCTCGAGAGCAGTGTaGGATCTTAGCCATGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: IPLEPDGTDGGEAPKRGTLSRAV*DLSHGE Trigger: TTCCCCATGGCTAAGATCTCACACTGCTCTCGAGAG...CGTCCCTCTTTTGGGTGCCTCACCACCATCTGTGCCATCAGGCTCCAGGGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR-3UTR GCA 90 bp | AAGGTAAAGTTAGAAAACCTAGGCCCTAAACATTCAGAGCTGAGTTCCAAGCTCAGGCAACAGTGTCGGTaGAGGAAAGCTGGAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KVKLENLGPKHSELSSKLRQQCR*RKAGGE Trigger: CTCACCTCCAGCTTTCCTGCACCGACACTGTTGCCT...GAGCTTGGAACTCAGCTCTGAATGTTTAGGGCCTAGGTTTTCTAACTTTACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| 3UTR CCA 72 bp | CGACCGTGTGCCACAGCCACAGCCACGGCGATGCTGTaGCCTCTGGGTTTGCCGGCCATCGGCACGTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: RPCATATATAML*PLGLPAIGTCS Trigger: GGAACACGTGCCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACACGGTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR GCA 72 bp | CATTCCGACCGTGTGCCACAGCCACAGCCACGGCGATaGTGTGGCCTCTGGGTTTGCCGGCCATCGGCACGT | + |
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Preference number: 3 (lower is better) Translates to: HSDRVPQPQPRR*CGLWVCRPSAR Trigger: ACGTGCCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACACGGTCGGAATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR CCA 72 bp | GTGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTaGGTTTGCCGGCCATCGGCACGTGTTCCTAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: VPQPQPRRCCGL*VCRPSARVPRE Trigger: CTCTCTAGGAACACGTGCCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR TCA 72 bp | GAACAGGCAACAGTGTCGGTGCAGGAAAGCTGGAGGTaGGCGCAGGCGCACCATGTCTTCCAGTGCCGTGAG | + |
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Preference number: 3 (lower is better) Translates to: EQATVSVQESWR*AQAHHVFQCRE Trigger: CTCACGGCACTGGAAGACATGGTGCGCCTGCGCTCACCTCCAGCTTTCCTGCACCGACACTGTTGCCTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| 3UTR GCA 72 bp | CGCCCCAGTCTTTCTCAGACATGGTGTTTCCAAAGCTaGCATTCCTGCAGCCGTTGCTCCGGAGTCGCCCGT | + |
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Preference number: 3 (lower is better) Translates to: RPSLSQTWCFQS*HSCSRCSGVAR Trigger: ACGGGCGACTCCGGAGCAACGGCTGCAGGAATGGCAGCTTTGGAAACACCATGTCTGAGAAAGACTGGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR CCA 72 bp | GTGCGCACATATTCCAGGCAAGACTTCAGATTCCCCTaGAGCCTGATGGCACAGATGGTGGTGAGGCACCCA | + |
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Preference number: 3 (lower is better) Translates to: VRTYSRQDFRFP*SLMAQMVVRHP Trigger: TGGGTGCCTCACCACCATCTGTGCCATCAGGCTCCAGGGGAATCTGAAGTCTTGCCTGGAATATGTGCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR CCA 72 bp | TTCCTAGAGAGGAGTCGCCCCAGTCTTTCTCAGACATaGTGTTTCCAAAGCTGCCATTCCTGCAGCCGTTGC | + |
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Preference number: 3 (lower is better) Translates to: FLERSRPSLSQT*CFQSCHSCSRC Trigger: GCAACGGCTGCAGGAATGGCAGCTTTGGAAACACCATGTCTGAGAAAGACTGGGGCGACTCCTCTCTAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| 3UTR TCA 72 bp | GAGGTGAGCGCAGGCGCACCATGTCTTCCAGTGCCGTaGGCGAAGAATACAACGAGAACTTTCCTTTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: EVSAGAPCLPVP*AKNTTRTFLCK Trigger: CTTACAAAGGAAAGTTCTCGTTGTATTCTTCGCTCACGGCACTGGAAGACATGGTGCGCCTGCGCTCACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| 3UTR TCA 72 bp | AGTCTGCTGGCAGGAAGGTATGCTGTATTAGGCAAGTaGCCCACCCTCACCAGCTCCCAATATTACATCTTC | + |
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Preference number: 3 (lower is better) Translates to: SLLAGRYAVLGK*PTLTSSQYYIF Trigger: GAAGATGTAATATTGGGAGCTGGTGAGGGTGGGTCACTTGCCTAATACAGCATACCTTCCTGCCAGCAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| CDS-3UTR CCA 90 bp | TGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTGGGTTTGCCGGCCATCGGTCCTCGGCTGACTCATaGTTCTTGGGAATTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CHSHSHGDAVASGFAGHRSSADS*FLGIGG Trigger: CCCACCAATTCCCAAGAACCATGAGTCAGCCGAGGA...CCGATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS-3UTR GCA 90 bp | GTGTGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTGGGTTTGCCGGCCATGGTGGGAATATGGATTaGATCTTACTTCGAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VCHSHSHGDAVASGFAGHGGNMD*ILLRKS Trigger: GGACTTTCGAAGTAAGATGCAATCCATATTCCCACC...ATGGCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS-3UTR TCA 90 bp | CGCACCATGTCTTCCAGTGCCGTGAGCGAAGAATACAACGAGAACTTTCCTTTGTCCACACTGCAAAGCTaGTCACACCAACTCCACACC | + |
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Preference number: 4 (lower is better) Translates to: RTMSSSAVSEEYNENFPLSTLQS*SHQLHT Trigger: GGTGTGGAGTTGGTGTGATCAGCTTTGCAGTGTGGA...CAAAGGAAAGTTCTCGTTGTATTCTTCGCTCACGGCACTGGAAGACATGGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| CDS-3UTR TCA 90 bp | TTTTTAATTGTATATACTTTTGTGGCTGTAGATACACGTGAGGGCAGGTGCGCATCCACACTGCAAAGCTaGTCACACCAACTCCACACC | + |
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Preference number: 4 (lower is better) Translates to: FLIVYTFVAVDTREGRCASTLQS*SHQLHT Trigger: GGTGTGGAGTTGGTGTGATCAGCTTTGCAGTGTGGA...TGCGCACCTGCCCTCACGTGTATCTACAGCCACAAAAGTATATACAATTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS-3UTR TCA 90 bp | CTTCTAGGTAATTCAATTGTTGTCTTAGCTTTAGGAAAACATTCCGACCGTGTGCTCCCACTCCTCGGCTaGCTCATGGTTCTTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LLGNSIVVLALGKHSDRVLPLLG*LMVLGN Trigger: ATTCCCAAGAACCATGAGTCAGCCGAGGAGTGGGAG...CACACGGTCGGAATGTTTTCCTAAAGCTAAGACAACAATTGAATTACCTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS-3UTR TCA 90 bp | GGTAACAAGCTGCCTACATATTGGGAAGAATTTAGTCATATTCTGGATCATTATTCCACACTGCAAAGCTaGTCACACCAACTCCACACC | + |
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Preference number: 4 (lower is better) Translates to: GNKLPTYWEEFSHILDHYSTLQS*SHQLHT Trigger: GGTGTGGAGTTGGTGTGATCAGCTTTGCAGTGTGGA...ATAATGATCCAGAATATGACTAAATTCTTCCCAATATGTAGGCAGCTTGTTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185896.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTTATTGTTCTAAACAACAACATTTCCTCCAGGTCCCTTCTGAGAACTTCGAATTGGTGGGAATATaGATTGCATCTTACTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: MVYCSKQQHFLQVPSENFELVGI*IASYFE Trigger: TTCGAAGTAAGATGCAATCCATATTCCCACCAATTC...GAAGTTCTCAGAAGGGACCTGGAGGAAATGTTGTTGTTTAGAACAATAAACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS-3UTR CAA 90 bp | ACCGTGTGCCACAGCCACAGCCACGGCGATGCTGTGGCCTCTGGGTTTGCCGGCGCCATAGTGCCCTTATaGAACCACTCAGGGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: TVCHSHSHGDAVASGFAGAIVPL*NHSGLF Trigger: GAAAAGCCCTGAGTGGTTCAATAAGGGCACTATGGC...GCCGGCAAACCCAGAGGCCACAGCATCGCCGTGGCTGTGGCTGTGGCACACGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS TCA 90 bp | CAAACAGTGCGCTGTGAACTCCTAAGGCTTTCCACACTGCAAAGCTaGTCACACCAACTCCACACCAGGCATAAAGAGAACCCCAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: QTVRCELLRLSTLQS*SHQLHTRHKENPSP Trigger: TGGGCTGGGGTTCTCTTTATGCCTGGTGTGGAGTTGGTGTGATCAGCTTTGCAGTGTGGAAAGCCTTAGGAGTTCACAGCGCACTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| CDS TCA 90 bp | AGTCCTTCATGCTGTGAACTCCTAAGGCTTTCCACACTGCAAAGCTaGTCACACCAACTCCACACCAGGCATAAAGAGAACCCCAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SPSCCELLRLSTLQS*SHQLHTRHKENPSP Trigger: TGGGCTGGGGTTCTCTTTATGCCTGGTGTGGAGTTGGTGTGATCAGCTTTGCAGTGTGGAAAGCCTTAGGAGTTCACAGCATGAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS TCA 90 bp | AGGTACTTACGCTGTGAACTCCTAAGGCTTTCCACACTGCAAAGCTaGTCACACCAACTCCACACCAGGCATAAAGAGAACCCCAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RYLRCELLRLSTLQS*SHQLHTRHKENPSP Trigger: TGGGCTGGGGTTCTCTTTATGCCTGGTGTGGAGTTGGTGTGATCAGCTTTGCAGTGTGGAAAGCCTTAGGAGTTCACAGCGTAAGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185896.2 |
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| CDS-3UTR CAA 90 bp | AACCTAGGCCCTAAACATTCAGAGCTGAGTTCCAAGCTCAAGTCTGCTGGCAGGGCCATAGTGCCCTTATaGAACCACTCAGGGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: NLGPKHSELSSKLKSAGRAIVPL*NHSGLF Trigger: GAAAAGCCCTGAGTGGTTCAATAAGGGCACTATGGC...CCTGCCAGCAGACTTGAGCTTGGAACTCAGCTCTGAATGTTTAGGGCCTAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| CDS-3UTR CAA 90 bp | GTCTTAGCTTTAGGAAAACATTCCGACCGTGTGCCACAGCCACAGCCACGGCGACATGGTTCTTGGGAATaGGTGGGAATATGGATTGCA | + |
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Preference number: 5 (lower is better) Translates to: VLALGKHSDRVPQPQPRRHGSWE*VGIWIA Trigger: TGCAATCCATATTCCCACCAATTCCCAAGAACCATG...TCGCCGTGGCTGTGGCTGTGGCACACGGTCGGAATGTTTTCCTAAAGCTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS CCA 90 bp | CCCACTCCTCGGCTGACTCATGGTTCTTGGGAATTGGTGGGAATATaGATTGCATCTTACTTCGAAAGTCCTTCATGCTGTGAACTCCTA | + |
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Preference number: 5 (lower is better) Translates to: PTPRLTHGSWELVGI*IASYFESPSCCELL Trigger: TAGGAGTTCACAGCATGAAGGACTTTCGAAGTAAGATGCAATCCATATTCCCACCAATTCCCAAGAACCATGAGTCAGCCGAGGAGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS-3UTR CAA 90 bp | TGTTGTCTTAGCTTTAGGAAAACATTCCGACCGTGTGCCACAGCCACAGCCACGTGGTGGGAATATGGATaGCATCTTACTTCGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: CCLSFRKTFRPCATATATWWEYG*HLTSKV Trigger: GACTTTCGAAGTAAGATGCAATCCATATTCCCACCA...CGTGGCTGTGGCTGTGGCACACGGTCGGAATGTTTTCCTAAAGCTAAGACAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS-3UTR CAA 90 bp | GTAATTTTTAGTTCAAGGTATCCATTTTACAGACACACACGCACACACACATGCGCCATAGTGCCCTTATaGAACCACTCAGGGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: VIFSSRYPFYRHTRTHTCAIVPL*NHSGLF Trigger: GAAAAGCCCTGAGTGGTTCAATAAGGGCACTATGGC...GCATGTGTGTGTGCGTGTGTGTCTGTAAAATGGATACCTTGAACTAAAAATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000185896.2 |
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| CDS-3UTR CAA 90 bp | TTTTTAATTGTATATACTTTTGTGGCTGTAGATACACGTGAGGGCAGGTGCGCAGCTGACTCATGGTTCTaGGGAATTGGTGGGAATATG | + |
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Preference number: 5 (lower is better) Translates to: FLIVYTFVAVDTREGRCAADSWF*GIGGNM Trigger: CATATTCCCACCAATTCCCAAGAACCATGAGTCAGC...TGCGCACCTGCCCTCACGTGTATCTACAGCCACAAAAGTATATACAATTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS TCA 72 bp | CACCGTGTCTCCTCTCGGCAATCAAACAGTGCGCTGTaGACTCCTAAGGCTTTCCACACTGCAAAGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: HRVSSRQSNSAL*TPKAFHTAKLI Trigger: GATCAGCTTTGCAGTGTGGAAAGCCTTAGGAGTTCACAGCGCACTGTTTGATTGCCGAGAGGAGACACGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188282.7 |
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| CDS CCA 72 bp | CACTTCAGGACTTCCTCCCACTCCTCGGCTGACTCATaGTTCTTGGGAATTGGTGGGAATATGGATTGCATC | + |
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Preference number: 6 (lower is better) Translates to: HFRTSSHSSADS*FLGIGGNMDCI Trigger: GATGCAATCCATATTCCCACCAATTCCCAAGAACCATGAGTCAGCCGAGGAGTGGGAGGAAGTCCTGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS TCA 72 bp | TCATTTCCACTTCAGGACTTCCTCCCACTCCTCGGCTaGCTCATGGTTCTTGGGAATTGGTGGGAATATGGA | + |
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Preference number: 6 (lower is better) Translates to: SFPLQDFLPLLG*LMVLGNWWEYG Trigger: TCCATATTCCCACCAATTCCCAAGAACCATGAGTCAGCCGAGGAGTGGGAGGAAGTCCTGAAGTGGAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS CAA 90 bp | TCAGGACTTCCTCCCACTCCTCGGCTGACTCATGGTTCTTGGGAATaGGTGGGAATATGGATTGCATCTTACTTCGAAAGTCCTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: SGLPPTPRLTHGSWE*VGIWIASYFESPSC Trigger: GCATGAAGGACTTTCGAAGTAAGATGCAATCCATATTCCCACCAATTCCCAAGAACCATGAGTCAGCCGAGGAGTGGGAGGAAGTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS CAA 90 bp | TTCCACTTCAGGACTTCCTCCCACTCCTCGGCTGACTCATGGTTCTaGGGAATTGGTGGGAATATGGATTGCATCTTACTTCGAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FHFRTSSHSSADSWF*GIGGNMDCILLRKS Trigger: GGACTTTCGAAGTAAGATGCAATCCATATTCCCACCAATTCCCAAGAACCATGAGTCAGCCGAGGAGTGGGAGGAAGTCCTGAAGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS CAA 72 bp | CCTCCCACTCCTCGGCTGACTCATGGTTCTTGGGAATaGGTGGGAATATGGATTGCATCTTACTTCGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: PPTPRLTHGSWE*VGIWIASYFES Trigger: ACTTTCGAAGTAAGATGCAATCCATATTCCCACCAATTCCCAAGAACCATGAGTCAGCCGAGGAGTGGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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| CDS CCA 72 bp | CGGCTGACTCATGGTTCTTGGGAATTGGTGGGAATATaGATTGCATCTTACTTCGAAAGTCCTTCATGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RLTHGSWELVGI*IASYFESPSCC Trigger: ACAGCATGAAGGACTTTCGAAGTAAGATGCAATCCATATTCCCACCAATTCCCAAGAACCATGAGTCAGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005053.14 |
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