Pregenerated sensors for TMEM241 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049411Ensembl transcript IDs: ENSMUST00000050228.15, ENSMUST00000055447.14, ENSMUST00000092075.5, ENSMUST00000209628.2, ENSMUST00000209859.2, ENSMUST00000211298.2, ENSMUST00000234833.2
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGCCAGCTGTGACGACCTTAGCACAGAGGATCCAGGCTGCGCACTaGCCTGGGGCCAGGATGCTTCTCAGCCTGACTGTACTGAGCATG | + |
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Preference number: 1 (lower is better) Translates to: KPAVTTLAQRIQAAH*PGARMLLSLTVLSM Trigger: CATGCTCAGTACAGTCAGGCTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGATCCTCTGTGCTAAGGTCGTCACAGCTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR GCA 90 bp | CATCGACAAGCCAGCTGTGACGACCTTAGCACAGAGGATCCAGGCTaGGCACTGCCCTGGGGCCAGGATGCTTCTCAGCCTGACTGTACT | + |
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Preference number: 1 (lower is better) Translates to: HRQASCDDLSTEDPG*ALPWGQDASQPDCT Trigger: AGTACAGTCAGGCTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGATCCTCTGTGCTAAGGTCGTCACAGCTGGCTTGTCGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR CCA 90 bp | AGCTGTGACGACCTTAGCACAGAGGATCCAGGCTGCGCACTGCCCTaGGGCCAGGATGCTTCTCAGCCTGACTGTACTGAGCATGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SCDDLSTEDPGCALP*GQDASQPDCTEHEE Trigger: TTCCTCATGCTCAGTACAGTCAGGCTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGATCCTCTGTGCTAAGGTCGTCACAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR GCA 90 bp | CAGCAGGGCCTCGCCAAGTCCACCAAGCAGGAAGCATCCCACAGTTaGTTTGGTCAGGGCCATATCAAACAGCAACATCGACAAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: QQGLAKSTKQEASHS*FGQGHIKQQHRQAS Trigger: GCTGGCTTGTCGATGTTGCTGTTTGATATGGCCCTGACCAAAGCAACTGTGGGATGCTTCCTGCTTGGTGGACTTGGCGAGGCCCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR CCA 90 bp | AAGTGGGCTGTTGCAATCATCAGCCATCCATGTGTTCAACTTGGCTaGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: KWAVAIISHPCVQLG*GMCSSQLCPAGNLS Trigger: GCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACACATGGATGGCTGATGATTGCAACAGCCCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR GCA 90 bp | GTTGCAATCATCAGCCATCCATGTGTTCAACTTGGCTGGGGCATGTaGAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: VAIISHPCVQLGWGM*SSQLCPAGNLSMVS Trigger: TGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACACATGGATGGCTGATGATTGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR CCA 90 bp | TCCACTGGCACAGCAGCTGCCATGGAACCTGTAGAAATACAAGAATaGAAAGTCCAGGGCACCGAAGAGGTCACCTGTCGGATGAGATGC | + |
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Preference number: 1 (lower is better) Translates to: STGTAAAMEPVEIQE*KVQGTEEVTCRMRC Trigger: GCATCTCATCCGACAGGTGACCTCTTCGGTGCCCTGGACTTTCCATTCTTGTATTTCTACAGGTTCCATGGCAGCTGCTGTGCCAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR CCA 90 bp | CACAGCCATCCCATTAAGACCCTCTGCTTCTTGATCCCGCAGAACTaGGTGCAGCAGAGAGGAGATGGTTCAGCATATAAGACGGACCCA | + |
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Preference number: 1 (lower is better) Translates to: HSHPIKTLCFLIPQN*VQQRGDGSAYKTDP Trigger: TGGGTCCGTCTTATATGCTGAACCATCTCCTCTCTGCTGCACCCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGGATGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR GCA 90 bp | CAGCGGTCCCTGGGAAGTCCCCCTAATAATAAGAAAGTGGGCTGTTaGAATCATCAGCCATCCATGTGTTCAACTTGGCTGGGGCATGTG | + |
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Preference number: 1 (lower is better) Translates to: QRSLGSPPNNKKVGC*NHQPSMCSTWLGHV Trigger: CACATGCCCCAGCCAAGTTGAACACATGGATGGCTGATGATTGCAACAGCCCACTTTCTTATTATTAGGGGGACTTCCCAGGGACCGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR CCA 90 bp | AAGAAAGTGGGCTGTTGCAATCATCAGCCATCCATGTGTTCAACTTaGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCT | + |
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Preference number: 1 (lower is better) Translates to: KKVGCCNHQPSMCST*LGHVQLTALPSWKP Trigger: AGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACACATGGATGGCTGATGATTGCAACAGCCCACTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR CCA 90 bp | TGTTCAACTTGGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTaGAAACCTCAGCATGGTCTCACTGTAATGTGGTCTTTTTATAGC | + |
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Preference number: 1 (lower is better) Translates to: CSTWLGHVQLTALPS*KPQHGLTVMWSFYS Trigger: GCTATAAAAAGACCACATTACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR TCA 90 bp | GTAGCTGTGTGGTTCTCTCCACCTGAGGACTCTCCATTGCTTAAATaGCATTTAGGACAGGCACAGGATGACATCTGGACAGATACCACT | + |
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Preference number: 1 (lower is better) Translates to: VAVWFSPPEDSPLLK*HLGQAQDDIWTDTT Trigger: AGTGGTATCTGTCCAGATGTCATCCTGTGCCTGTCCTAAATGTCATTTAAGCAATGGAGAGTCCTCAGGTGGAGAGAACCACACAGCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| 3UTR CCA 90 bp | ATAACTTCCTGTAATTCCAACTCCAGGGGACCCAATATTCTCCTCTaGCCTCCCTGGGGCACCTGCACTCATTATGCACATGCTTATAAA | + |
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Preference number: 1 (lower is better) Translates to: ITSCNSNSRGPNILL*PPWGTCTHYAHAYK Trigger: TTTATAAGCATGTGCATAATGAGTGCAGGTGCCCCAGGGAGGCCAGAGGAGAATATTGGGTCCCCTGGAGTTGGAATTACAGGAAGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| 3UTR GCA 90 bp | AACTCCAGGGGACCCAATATTCTCCTCTGGCCTCCCTGGGGCACCTaGACTCATTATGCACATGCTTATAAACATACAGACAATTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: NSRGPNILLWPPWGT*THYAHAYKHTDNLN Trigger: ATTTAAATTGTCTGTATGTTTATAAGCATGTGCATAATGAGTGCAGGTGCCCCAGGGAGGCCAGAGGAGAATATTGGGTCCCCTGGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| 3UTR GCA 90 bp | TGGGTTCTTTCTAGCTTCTGCCTATTAAAAATAAGCATGCGTCCTTaGTACATGTTGGAGCATCTTCTGGGTATATGCTCAGGAGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: WVLSSFCLLKISMRP*YMLEHLLGICSGVV Trigger: TACCACTCCTGAGCATATACCCAGAAGATGCTCCAACATGTAGCAAGGACGCATGCTTATTTTTAATAGGCAGAAGCTAGAAAGAACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
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| 3UTR GCA 90 bp | GTATCCATTCCTCTGTTGGAGGACAACTGGGTTCTTTCTAGCTTCTaGCTATTAAAAATAAGCATGCGTCCTTGCTACATGTTGGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: VSIPLLEDNWVLSSF*LLKISMRPCYMLEH Trigger: ATGCTCCAACATGTAGCAAGGACGCATGCTTATTTTTAATAGGCAGAAGCTAGAAAGAACCCAGTTGTCCTCCAACAGAGGAATGGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCAGCAGGGCCTCGCCAAGTCCACCAAGCAGGAAGCATCCCACAGTTGCTTGGCTGCGCACTGCCCTaGGGCCAGGATGCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KPAGPRQVHQAGSIPQLLGCALP*GQDASQ Trigger: CTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCC...AAGCAACTGTGGGATGCTTCCTGCTTGGTGGACTTGGCGAGGCCCTGCTGGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAGCAATCCTCATAGCCCAGAGGGTCTCTGTGGGTCAATGGCACGGGTCTATCCAGGCTGCGCACTaGCCTGGGGCCAGGATGCTT | + |
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Preference number: 2 (lower is better) Translates to: QGAILIAQRVSVGQWHGSIQAAH*PGARML Trigger: AAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGAT...AGACCCGTGCCATTGACCCACAGAGACCCTCTGGGCTATGAGGATTGCTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR CAA 90 bp | CCAGCAGGGCCTCGCCAAGTCCACCAAGCAGGAAGCATCCCACAGTaGCTTTGGTCAGGGCCATATCAAACAGCAACATCGACAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PAGPRQVHQAGSIPQ*LWSGPYQTATSTSQ Trigger: CTGGCTTGTCGATGTTGCTGTTTGATATGGCCCTGACCAAAGCAACTGTGGGATGCTTCCTGCTTGGTGGACTTGGCGAGGCCCTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR CAA 90 bp | AGGGCCTCGCCAAGTCCACCAAGCAGGAAGCATCCCACAGTTGCTTaGGTCAGGGCCATATCAAACAGCAACATCGACAAGCCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RASPSPPSRKHPTVA*VRAISNSNIDKPAV Trigger: CACAGCTGGCTTGTCGATGTTGCTGTTTGATATGGCCCTGACCAAAGCAACTGTGGGATGCTTCCTGCTTGGTGGACTTGGCGAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTCCAGCGCCCCTGATCAACCCCACACCTGCCCTGTCCCACATGTCATAACACAGCAAGCTGCAGGCTaGCTTTTCTTGTCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: WSSAPDQPHTCPVPHVITQQAAG*LFLSIF Trigger: GAAGATGGACAAGAAAAGGCAGCCTGCAGCTTGCTG...TGTTATGACATGTGGGACAGGGCAGGTGTGGGGTTGATCAGGGGCGCTGGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR CAA 90 bp | CCATCCATGTGTTCAACTTGGCTGGGGCATGTGCAGCTCACAGCTTaGCCCAGCTGGAAACCTCAGCATGGTCTCACTGTAATGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: PSMCSTWLGHVQLTA*PSWKPQHGLTVMWS Trigger: AGACCACATTACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACACATGGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGCCATCCCATTAAGACCCTCTGCTTCTTGATCCCGCAGAACTGGGTGCAGCACTGGCACAGCAGCTaGCATGGAACCTGTAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: HSHPIKTLCFLIPQNWVQHWHSS*HGTCRN Trigger: ATTTCTACAGGTTCCATGGCAGCTGCTGTGCCAGTG...CTGCACCCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGGATGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGAGCAATCCTCATAGCCCAGAGGGTCTCTGTGGGTCAATGGCACGGGTCTTGTGTGGGAAGGCATaGGCTCCAGAAAAATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: TRSNPHSPEGLCGSMARVLCGKA*APEKSK Trigger: CTTTGATTTTTCTGGAGCCCATGCCTTCCCACACAA...GACCCGTGCCATTGACCCACAGAGACCCTCTGGGCTATGAGGATTGCTCCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR-3UTR TCA 90 bp | TACATCAGCATAACCACAAAGGCTGCCACTCACTCCAAGCTAAGGATCTTCGCTAGGTCACCTGTCGGATaGGATGCAAATGCCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: YISITTKAATHSKLRIFARSPVG*DANARS Trigger: ACTCCTGGCATTTGCATCTCATCCGACAGGTGACCT...AGCGAAGATCCTTAGCTTGGAGTGAGTGGCAGCCTTTGTGGTTATGCTGATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | AGACGGACCCATTCTCTGCAGCGGTCCCTGGGAAGTCCCCCTAATAATAAGAAAACCTGTCGGATGAGATaGAAATGCCAGGAGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: RRTHSLQRSLGSPPNNKKTCRMR*KCQEYH Trigger: ATGGTACTCCTGGCATTTGCATCTCATCCGACAGGT...TTTCTTATTATTAGGGGGACTTCCCAGGGACCGCTGCAGAGAATGGGTCCGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTCAGCACTCAGGAGGCTAAGGCAGAAGGTGTGGTATTTAAGGCCCACCTGTTGTGTGGGAAGGCATaGGCTCCAGAAAAATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: DLSTQEAKAEGVVFKAHLLCGKA*APEKSK Trigger: CTTTGATTTTTCTGGAGCCCATGCCTTCCCACACAA...CAGGTGGGCCTTAAATACCACACCTTCTGCCTTAGCCTCCTGAGTGCTGAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | TACATCAGCATAACCACAAAGGCTGCCACTCACTCCAAGCTAAGGATCTTCGCTCAGCAAGCTGCAGGCTaGCTTTTCTTGTCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: YISITTKAATHSKLRIFAQQAAG*LFLSIF Trigger: GAAGATGGACAAGAAAAGGCAGCCTGCAGCTTGCTG...AGCGAAGATCCTTAGCTTGGAGTGAGTGGCAGCCTTTGTGGTTATGCTGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCACTATCTGTAACTCCAGTTTCTGTAGAGCTGATGGCCTCTTCTGACCTTGATCAACCCCACACCTaGCCTGTCCCACATGTCATA | + |
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Preference number: 2 (lower is better) Translates to: SSLSVTPVSVELMASSDLDQPHT*PVPHVI Trigger: TATGACATGTGGGACAGGGCAGGTGTGGGGTTGATC...AAGGTCAGAAGAGGCCATCAGCTCTACAGAAACTGGAGTTACAGATAGTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCAATGGTCTACAGATTCAACACATCCTGACAAACTCAAAAGAACAAGAGGGCTGCGCACTGCCCTaGGGCCAGGATGCTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: MFNGLQIQHILTNSKEQEGCALP*GQDASQ Trigger: CTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCC...CTCTTGTTCTTTTGAGTTTGTCAGGATGTGTTGAATCTGTAGACCATTGAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR CCA 90 bp | GGATCTGAGCCTGCAACAAGGAGCAATCCTCATAGCCCAGAGGGTCTCTGTGGGGGTCTCACTGTAATGTaGTCTTTTTATAGCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GSEPATRSNPHSPEGLCGGLTVM*SFYSSQ Trigger: TTGAGAGCTATAAAAAGACCACATTACAGTGAGACC...CCCACAGAGACCCTCTGGGCTATGAGGATTGCTCCTTGTTGCAGGCTCAGATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR-3UTR TCA 90 bp | GGCATCAAGTCTTGGAACATTTTCACCTTAAATGATGAGCAGAGATCAGGAAAGAGGTCACCTGTCGGATaGGATGCAAATGCCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GIKSWNIFTLNDEQRSGKRSPVG*DANARS Trigger: ACTCCTGGCATTTGCATCTCATCCGACAGGTGACCT...CTTTCCTGATCTCTGCTCATCATTTAAGGTGAAAATGTTCCAAGACTTGATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGATTAGTAGCTGTGTGGTTCTCTCCACCTGAGGACTCTCCATTGCTTAAAAAACCACCGAAGACTTaGAACAACAACCAAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LGLVAVWFSPPEDSPLLKKPPKT*NNNQVL Trigger: CAGAACTTGGTTGTTGTTCCAAGTCTTCGGTGGTTT...TTTAAGCAATGGAGAGTCCTCAGGTGGAGAGAACCACACAGCTACTAATCCCAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| 3UTR-3UTR TCA 90 bp | AATAAGCATGCGTCCTTGCTACATGTTGGAGCATCTTCTGGGTATATGCTCAGGCTATGTCCAATTTTCTaGGGAAATGCCAGACTGATT | + |
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Preference number: 2 (lower is better) Translates to: NKHASLLHVGASSGYMLRLCPIF*GNARLI Trigger: AATCAGTCTGGCATTTCCTCAGAAAATTGGACATAG...CCTGAGCATATACCCAGAAGATGCTCCAACATGTAGCAAGGACGCATGCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAATAATAAGAAAGTGGGCTGTTGCAATCATCAGCCATCCATGTGTTCAACTCGGATGAGATGCAAATaGCAGGAGTACCATGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: PNNKKVGCCNHQPSMCSTRMRCK*QEYHAE Trigger: TTCAGCATGGTACTCCTGGCATTTGCATCTCATCCG...AGTTGAACACATGGATGGCTGATGATTGCAACAGCCCACTTTCTTATTATTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | GCTACATGTTGGAGCATCTTCTGGGTATATGCTCAGGAGTGGTATAGCTGGGTAAATTTTCTGAGGAAATaGCAGACTGATTTCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ATCWSIFWVYAQEWYSWVNFLRK*QTDFQS Trigger: ACTCTGGAAATCAGTCTGGCATTTCCTCAGAAAATT...TACCCAGCTATACCACTCCTGAGCATATACCCAGAAGATGCTCCAACATGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCAGAAAAATCAAAGGGTATAAGAGACTCCAAGATGTAAAGACACAAAACCGGATGAGATGCAAATaGCAGGAGTACCATGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: GSRKIKGYKRLQDVKTQNRMRCK*QEYHAE Trigger: TTCAGCATGGTACTCCTGGCATTTGCATCTCATCCG...GTTTTGTGTCTTTACATCTTGGAGTCTCTTATACCCTTTGATTTTTCTGGAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAATTGAAAAGTACACAGGCATCAAGTCTTGGAACATTTTCACCTTAAATGATCAACCCCACACCTaGCCTGTCCCACATGTCATA | + |
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Preference number: 2 (lower is better) Translates to: QQIEKYTGIKSWNIFTLNDQPHT*PVPHVI Trigger: TATGACATGTGGGACAGGGCAGGTGTGGGGTTGATC...ATTTAAGGTGAAAATGTTCCAAGACTTGATGCCTGTGTACTTTTCAATTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR-3UTR CCA 90 bp | AACATACATGTCTTGTTTTGTGTGGGAAGGCATGGGCTCCAGAAAAATCAAAGGGTAGAAATACAAGAATaGAAAGTCCAGGGCACCGAA | + |
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Preference number: 2 (lower is better) Translates to: NIHVLFCVGRHGLQKNQRVEIQE*KVQGTE Trigger: TTCGGTGCCCTGGACTTTCCATTCTTGTATTTCTAC...CCTTTGATTTTTCTGGAGCCCATGCCTTCCCACACAAAACAAGACATGTATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAGATCACTTTTGCAGAGCATGAGTTCAATTCACAGCAGTCACGTGGCAGCTTCTAAGACAGCAAATTaGAAAGTACACAGGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: LRSLLQSMSSIHSSHVAASKTAN*KVHRHQ Trigger: TTGATGCCTGTGTACTTTTCAATTTGCTGTCTTAGA...AGCTGCCACGTGACTGCTGTGAATTGAACTCATGCTCTGCAAAAGTGATCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAAATCAAAGGGTATAAGAGACTCCAAGATGTAAAGACACAAAACAACTCCCCCATTAAGACCCTCTaGTTCTTGATCCCGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RKIKGYKRLQDVKTQNNSPIKTL*FLIPQN Trigger: GTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGG...GGAGTTGTTTTGTGTCTTTACATCTTGGAGTCTCTTATACCCTTTGATTTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAAGGACAGGAATTAAAGGTCCTCACATTCTATATACATAAATCTATCCTCACCTGTCGGATGAGATaGAAATGCCAGGAGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: RKGQELKVLTFYIHKSILTCRMR*KCQEYH Trigger: ATGGTACTCCTGGCATTTGCATCTCATCCGACAGGT...GAGGATAGATTTATGTATATAGAATGTGAGGACCTTTAATTCCTGTCCTTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
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| 3UTR-3UTR GCA 90 bp | GGCATCAAGTCTTGGAACATTTTCACCTTAAATGATGAGCAGAGATCAGGAAAGAACAACTCCCCAAAATaGAACAAGATTCCATGGACT | + |
|
Preference number: 2 (lower is better) Translates to: GIKSWNIFTLNDEQRSGKNNSPK*NKIPWT Trigger: AGTCCATGGAATCTTGTTGCATTTTGGGGAGTTGTT...CTTTCCTGATCTCTGCTCATCATTTAAGGTGAAAATGTTCCAAGACTTGATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAGGACAGGAATTAAAGGTCCTCACATTCTATATACATAAATCTATCCTCATCCCACAGTTGCTTTaGTCAGGGCCATATCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RKGQELKVLTFYIHKSILIPQLL*SGPYQT Trigger: TGTTTGATATGGCCCTGACCAAAGCAACTGTGGGAT...GAGGATAGATTTATGTATATAGAATGTGAGGACCTTTAATTCCTGTCCTTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
||
| 3UTR GCA 72 bp | GTGACGACCTTAGCACAGAGGATCCAGGCTGCGCACTaGCCTGGGGCCAGGATGCTTCTCAGCCTGACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: VTTLAQRIQAAH*PGARMLLSLTV Trigger: TACAGTCAGGCTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGATCCTCTGTGCTAAGGTCGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
||
| 3UTR GCA 72 bp | GCCAGGGGCTGTGTCCTCCAGCAGCAAGCTGCAGGCTaGCTTTTCTTGTCCATCTTCATGAGGAACTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ARGCVLQQQAAG*LFLSIFMRNSS Trigger: GGAGGAGTTCCTCATGAAGATGGACAAGAAAAGGCAGCCTGCAGCTTGCTGCTGGAGGACACAGCCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCAACAAGGAGCAATCCTCATAGCCCAGAGGGTCTCTGTGGGTCAATGGCAGTGCAGCTCACAGCTTaGCCCAGCTGGAAACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PATRSNPHSPEGLCGSMAVQLTA*PSWKPQ Trigger: CTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCAC...TGCCATTGACCCACAGAGACCCTCTGGGCTATGAGGATTGCTCCTTGTTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR GCA 72 bp | ATCAGCCATCCATGTGTTCAACTTGGCTGGGGCATGTaGAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ISHPCVQLGWGM*SSQLCPAGNLS Trigger: GCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACACATGGATGGCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| 3UTR CCA 72 bp | TGGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTaGAAACCTCAGCATGGTCTCACTGTAATGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WLGHVQLTALPS*KPQHGLTVMWS Trigger: AGACCACATTACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| 3UTR CCA 72 bp | GTTGCAATCATCAGCCATCCATGTGTTCAACTTGGCTaGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VAIISHPCVQLG*GMCSSQLCPAG Trigger: TCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACACATGGATGGCTGATGATTGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| 3UTR CCA 72 bp | GGGTCTCTGTGGGTCAATGGCACGGGTCTCCTACACTaGAAGGCTGATGAAGTAAGCTCAGTACGGCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSLWVNGTGLLH*KADEVSSVRPK Trigger: TTTTGGCCGTACTGAGCTTACTTCATCAGCCTTCCAGTGTAGGAGACCCGTGCCATTGACCCACAGAGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR CCA 72 bp | CCCAGCTGGAAACCTCAGCATGGTCTCACTGTAATGTaGTCTTTTTATAGCTCTCAAGAGGGAGGCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PSWKPQHGLTVM*SFYSSQEGGQG Trigger: CCCCTGGCCTCCCTCTTGAGAGCTATAAAAAGACCACATTACAGTGAGACCATGCTGAGGTTTCCAGCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGAACTACATCAGCATAACCACAAAGGCTGCCACTCACTCCAAGCTAAGGATCCATGTGTTCAACTaGGCTGGGGCATGTGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GWNYISITTKAATHSKLRIHVFN*AGACAA Trigger: AGCTGCACATGCCCCAGCCAAGTTGAACACATGGAT...CCTTAGCTTGGAGTGAGTGGCAGCCTTTGTGGTTATGCTGATGTAGTTCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR TCA 72 bp | GGAAAGTCCAGGGCACCGAAGAGGTCACCTGTCGGATaGGATGCAAATGCCAGGAGTACCATGCTGAATATA | + |
|
Preference number: 3 (lower is better) Translates to: GKSRAPKRSPVG*DANARSTMLNI Trigger: TATATTCAGCATGGTACTCCTGGCATTTGCATCTCATCCGACAGGTGACCTCTTCGGTGCCCTGGACTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
||
| 3UTR CCA 72 bp | CAAGTCCACCAAGCAGGAAGCATCCCACAGTTGCTTTaGTCAGGGCCATATCAAACAGCAACATCGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QVHQAGSIPQLL*SGPYQTATSTS Trigger: GCTTGTCGATGTTGCTGTTTGATATGGCCCTGACCAAAGCAACTGTGGGATGCTTCCTGCTTGGTGGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
||
| 3UTR CCA 72 bp | CCCATTAAGACCCTCTGCTTCTTGATCCCGCAGAACTaGGTGCAGCAGAGAGGAGATGGTTCAGCATATAAG | + |
|
Preference number: 3 (lower is better) Translates to: PIKTLCFLIPQN*VQQRGDGSAYK Trigger: CTTATATGCTGAACCATCTCCTCTCTGCTGCACCCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| 3UTR GCA 72 bp | GTCCAGGGCACCGAAGAGGTCACCTGTCGGATGAGATaGAAATGCCAGGAGTACCATGCTGAATATATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VQGTEEVTCRMR*KCQEYHAEYIV Trigger: AACTATATATTCAGCATGGTACTCCTGGCATTTGCATCTCATCCGACAGGTGACCTCTTCGGTGCCCTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
||
| 3UTR GCA 72 bp | GGACCCAATATTCTCCTCTGGCCTCCCTGGGGCACCTaGACTCATTATGCACATGCTTATAAACATACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GPNILLWPPWGT*THYAHAYKHTD Trigger: GTCTGTATGTTTATAAGCATGTGCATAATGAGTGCAGGTGCCCCAGGGAGGCCAGAGGAGAATATTGGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
||
| 3UTR-3UTR CAA 90 bp | TACATCAGCATAACCACAAAGGCTGCCACTCACTCCAAGCTAAGGATCTTCGCTGCAGGCTGCCTTTTCTaGTCCATCTTCATGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: YISITTKAATHSKLRIFAAGCLF*SIFMRN Trigger: GTTCCTCATGAAGATGGACAAGAAAAGGCAGCCTGC...AGCGAAGATCCTTAGCTTGGAGTGAGTGGCAGCCTTTGTGGTTATGCTGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR TCA 72 bp | TGTAACTCCAGTTTCTGTAGAGCTGATGGCCTCTTCTaGCCTTCACAGGTACCAGGCACACATGTGGTATAC | + |
|
Preference number: 3 (lower is better) Translates to: CNSSFCRADGLF*PSQVPGTHVVY Trigger: GTATACCACATGTGTGCCTGGTACCTGTGAAGGTCAGAAGAGGCCATCAGCTCTACAGAAACTGGAGTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTCAATTCACAGCAGTCACGTGGCAGCTCACTATCTGTAACTCCAGTTTCTCATACATGTCTTGTTTaGTGTGGGAAGGCATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EFNSQQSRGSSLSVTPVSHTCLV*CGKAWA Trigger: AGCCCATGCCTTCCCACACAAAACAAGACATGTATG...AGAAACTGGAGTTACAGATAGTGAGCTGCCACGTGACTGCTGTGAATTGAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR GCA 72 bp | CTGGGAAGTCCCCCTAATAATAAGAAAGTGGGCTGTTaGAATCATCAGCCATCCATGTGTTCAACTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGSPPNNKKVGC*NHQPSMCSTWL Trigger: CAGCCAAGTTGAACACATGGATGGCTGATGATTGCAACAGCCCACTTTCTTATTATTAGGGGGACTTCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTGTATCCATTCCTCTGTTGGAGGACAACTGGGTTCTTTCTAGCTTCTGCCGTCCTTGCTACATGTaGGAGCATCTTCTGGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: FSVSIPLLEDNWVLSSFCRPCYM*EHLLGI Trigger: TATACCCAGAAGATGCTCCAACATGTAGCAAGGACG...GCAGAAGCTAGAAAGAACCCAGTTGTCCTCCAACAGAGGAATGGATACAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| 3UTR CCA 72 bp | AGTTTAAGTACTGCTGGTCAATGTCACTTAGCACAGTaGGCTTCCGGGACTTCCGAAGTATTTTGTAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLSTAGQCHLAQ*ASGTSEVFCKN Trigger: GTTCTTACAAAATACTTCGGAAGTCCCGGAAGCCCACTGTGCTAAGTGACATTGACCAGCAGTACTTAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
||
| 3UTR-3UTR CAA 90 bp | AAACAACTCCCCAAAATGCAACAAGATTCCATGGACTGTGACATCAATTCCAAAGCAGGCTGCCTTTTCTaGTCCATCTTCATGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KQLPKMQQDSMDCDINSKAGCLF*SIFMRN Trigger: GTTCCTCATGAAGATGGACAAGAAAAGGCAGCCTGC...TTTGGAATTGATGTCACAGTCCATGGAATCTTGTTGCATTTTGGGGAGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACTATCTGTAACTCCAGTTTCTGTAGAGCTGATGGCCTCTTCTGACCTTCACCATAACATACATGTCTaGTTTTGTGTGGGAAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLSVTPVSVELMASSDLHHNIHV*FCVGRH Trigger: ATGCCTTCCCACACAAAACAAGACATGTATGTTATG...GTGAAGGTCAGAAGAGGCCATCAGCTCTACAGAAACTGGAGTTACAGATAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR GCA 72 bp | TATTCAGGTAGTTCTATGTCCAATTTTCTGAGGAAATaGCAGACTGATTTCCAGAGTGGTTGTACCAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: YSGSSMSNFLRK*QTDFQSGCTSL Trigger: CAAGCTGGTACAACCACTCTGGAAATCAGTCTGGCATTTCCTCAGAAAATTGGACATAGAACTACCTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAAATCAAAGGGTATAAGAGACTCCAAGATGTAAAGACACAAAACAACTCCGCAGGCTGCCTTTTCTaGTCCATCTTCATGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RKIKGYKRLQDVKTQNNSAGCLF*SIFMRN Trigger: GTTCCTCATGAAGATGGACAAGAAAAGGCAGCCTGC...GGAGTTGTTTTGTGTCTTTACATCTTGGAGTCTCTTATACCCTTTGATTTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| 3UTR CCA 72 bp | CTCTATTTGCTCTATAGGACATTCCTATCTACTTACTaGTTTGCTATACTAGATGAAGAACAACAGCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LYLLYRTFLSTY*FAILDEEQQRV Trigger: CACTCGCTGTTGTTCTTCATCTAGTATAGCAAACCAGTAAGTAGATAGGAATGTCCTATAGAGCAAATAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
||
| 3UTR CCA 72 bp | ACATTTTCTGTATCCATTCCTCTGTTGGAGGACAACTaGGTTCTTTCTAGCTTCTGCCTATTAAAAATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TFSVSIPLLEDN*VLSSFCLLKIS Trigger: GCTTATTTTTAATAGGCAGAAGCTAGAAAGAACCCAGTTGTCCTCCAACAGAGGAATGGATACAGAAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAAGGACAGGAATTAAAGGTCCTCACATTCTATATACATAAATCTATCCTCAAAACCACCGAAGACTaGGAACAACAACCAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RKGQELKVLTFYIHKSILKTTED*EQQPSS Trigger: AGAACTTGGTTGTTGTTCCAAGTCTTCGGTGGTTTT...GAGGATAGATTTATGTATATAGAATGTGAGGACCTTTAATTCCTGTCCTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| CDS-3UTR CCA 90 bp | GGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCACTGGCTGCGCACTGCCCTaGGGCCAGGATGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHVQLTALPSWKPQHGLTGCALP*GQDASQ Trigger: CTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCC...AGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR GCA 90 bp | AACTTGGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCAATCCAGGCTGCGCACTaGCCTGGGGCCAGGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NLAGACAAHSFAQLETSAIQAAH*PGARML Trigger: AAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGAT...TGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTTCAACTTGGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACATCCAGGCTGCGCACTaGCCTGGGGCCAGGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CVQLGWGMCSSQLCPAGNIQAAH*PGARML Trigger: AAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGAT...GTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGAGGCCAGGGGCTGTGTCCTCCAGCAGCAAGCTGCAGGCTGCCTTTTCTTGCAAAAGTCCACCAATaGATGTCTGCCACCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EGGQGLCPPAASCRLPFLAKVHQ*MSATLG Trigger: TCCAAGGGTGGCAGACATTCATTGGTGGACTTTTGC...AAGAAAAGGCAGCCTGCAGCTTGCTGCTGGAGGACACAGCCCCTGGCCTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGGCCAGGGGCTGTGTCCTCCAGCAGCAAGCTGCAGGCTGCCTTTTCTTATCCCACAGTTGCTTTaGTCAGGGCCATATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: EGGQGLCPPAASCRLPFLIPQLL*SGPYQT Trigger: TGTTTGATATGGCCCTGACCAAAGCAACTGTGGGAT...AAGAAAAGGCAGCCTGCAGCTTGCTGCTGGAGGACACAGCCCCTGGCCTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR TCA 90 bp | GGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCACTGCAAAAGTCCACCAATaGATGTCTGCCACCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHVQLTALPSWKPQHGLTAKVHQ*MSATLG Trigger: TCCAAGGGTGGCAGACATTCATTGGTGGACTTTTGC...AGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | TGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCAGCAAAAGTCCACCAATaGATGTCTGCCACCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WGMCSSQLCPAGNLSMVSAKVHQ*MSATLG Trigger: TCCAAGGGTGGCAGACATTCATTGGTGGACTTTTGC...TGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | TTCAACTTGGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCCCACAAACAGCGCTaGAGCAGGAAGCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FNLAGACAAHSFAQLETSAHKQR*SRKPYQ Trigger: TTGATATGGCTTCCTGCTTCAGCGCTGTTTGTGGGC...TGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | GGACACAGCCATCCCATTAAGACCCTCTGCTTCTTGATCCCGCAGAACTGGGTGAGGTCACCTGTCGGATaGGATGCAAATGCCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHSHPIKTLCFLIPQNWVRSPVG*DANARS Trigger: ACTCCTGGCATTTGCATCTCATCCGACAGGTGACCT...CACCCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGGATGGCTGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTTTGGACCCCGCATAGATTATGCCCACAAACAGCGCTGAAGCAGGAAGCCCTGCCACCTTGTTGGTaGGGTGAGAAGCCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KLWTPHRLCPQTALKQEALPPCW*GEKPGN Trigger: GTTACCTGGCTTCTCACCTCACCAACAAGGTGGCAG...GGCTTCCTGCTTCAGCGCTGTTTGTGGGCATAATCTATGCGGGGTCCAAAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234833.2 |
||
| CDS-3UTR CCA 90 bp | GCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCACTGTATCCCAAAACTCCACTaGCACAGCAGCTGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACAAHSFAQLETSAWSHCIPKLH*HSSCHG Trigger: TCCATGGCAGCTGCTGTGCCAGTGGAGTTTTGGGAT...ACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| 3UTR CAA 72 bp | CCTCGCCAAGTCCACCAAGCAGGAAGCATCCCACAGTaGCTTTGGTCAGGGCCATATCAAACAGCAACATCG | + |
|
Preference number: 4 (lower is better) Translates to: PRQVHQAGSIPQ*LWSGPYQTATS Trigger: CGATGTTGCTGTTTGATATGGCCCTGACCAAAGCAACTGTGGGATGCTTCCTGCTTGGTGGACTTGGCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050228.15 ENSMUST00000211298.2 |
||
| 3UTR CAA 72 bp | TGTTCAACTTGGCTGGGGCATGTGCAGCTCACAGCTTaGCCCAGCTGGAAACCTCAGCATGGTCTCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CSTWLGHVQLTA*PSWKPQHGLTV Trigger: TACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| 3UTR CAA 72 bp | GTAGGACACAGCCATCCCATTAAGACCCTCTGCTTCTaGATCCCGCAGAACTGGGTGCAGCAGAGAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGHSHPIKTLCF*IPQNWVQQRGD Trigger: ATCTCCTCTCTGCTGCACCCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGGATGGCTGTGTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTAGGACACAGCCATCCCATTAAGACCCTCTGCTTCTTGATCCCGCAGAACGCCCACAAACAGCGCTaGAGCAGGAAGCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVGHSHPIKTLCFLIPQNAHKQR*SRKPYQ Trigger: TTGATATGGCTTCCTGCTTCAGCGCTGTTTGTGGGC...GTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGGATGGCTGTGTCCTACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | TATAGCTCTCAAGAGGGAGGCCAGGGGCTGTGTCCTCCAGCAGCAAGCTGCAGGGGCACTACAGATCTTTaGGAGCGATGTTTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSSQEGGQGLCPPAASCRGTTDL*ERCFLF Trigger: AAAGAGAAAACATCGCTCTCAAAGATCTGTAGTGCC...CCTGCAGCTTGCTGCTGGAGGACACAGCCCCTGGCCTCCCTCTTGAGAGCTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGGGGCTGTGTCCTCCAGCAGCAAGCTGCAGGCTGCCTTTTCTTGTCCATCCCACCAATGAATGTCTaGCACCCTTGGAATAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARGCVLQQQAAGCLFLSIPPMNV*HPWNNV Trigger: TACATTATTCCAAGGGTGGCAGACATTCATTGGTGG...GATGGACAAGAAAAGGCAGCCTGCAGCTTGCTGCTGGAGGACACAGCCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTTGATCCCGCAGAACTGGGTGCAGCAGAGAGGAGATGGTTCAGCATATGCCCACAAACAGCGCTaGAGCAGGAAGCCATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLIPQNWVQQRGDGSAYAHKQR*SRKPYQ Trigger: TTGATATGGCTTCCTGCTTCAGCGCTGTTTGTGGGC...ATATGCTGAACCATCTCCTCTCTGCTGCACCCAGTTCTGCGGGATCAAGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCCAGCGCCCCTGATCAACCCCACACCTGCCCTGTCCCACATGTCATAACACCACCAATGAATGTCTaGCACCCTTGGAATAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: WSSAPDQPHTCPVPHVITPPMNV*HPWNNV Trigger: TACATTATTCCAAGGGTGGCAGACATTCATTGGTGG...TGTTATGACATGTGGGACAGGGCAGGTGTGGGGTTGATCAGGGGCGCTGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | AAGACCCTCTGCTTCTTGATCCCGCAGAACTGGGTGCAGCAGAGAGGAGATGGTCGGATGAGATGCAAATaGCAGGAGTACCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KTLCFLIPQNWVQQRGDGRMRCK*QEYHAE Trigger: TTCAGCATGGTACTCCTGGCATTTGCATCTCATCCG...ACCATCTCCTCTCTGCTGCACCCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTCTGCTTCTTGATCCCGCAGAACTGGGTGCAGCAGAGAGGAGATGGTTCAACCTGTCGGATGAGATaGAAATGCCAGGAGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLCFLIPQNWVQQRGDGSTCRMR*KCQEYH Trigger: ATGGTACTCCTGGCATTTGCATCTCATCCGACAGGT...TGAACCATCTCCTCTCTGCTGCACCCAGTTCTGCGGGATCAAGAAGCAGAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR GCA 90 bp | CCCATTCTCTGCAGCGGTCCCTGGGAAGTCCCCCTAATAATAAGAAAGTGGGCTCACTGGCACAGCAGCTaGCATGGAACCTGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PILCSGPWEVPLIIRKWAHWHSS*HGTCRN Trigger: ATTTCTACAGGTTCCATGGCAGCTGCTGTGCCAGTG...AGCCCACTTTCTTATTATTAGGGGGACTTCCCAGGGACCGCTGCAGAGAATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR TCA 90 bp | AAGACCCTCTGCTTCTTGATCCCGCAGAACTGGGTGCAGCAGAGAGGAGATGGTTCTGGTACCCACAGGTaGGAACTTCAGCTACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: KTLCFLIPQNWVQQRGDGSGTHR*ELQLHY Trigger: ATAATGTAGCTGAAGTTCTCACCTGTGGGTACCAGA...ACCATCTCCTCTCTGCTGCACCCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | AACTTGGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGCAGGCACTACAGATCTTTaGGAGCGATGTTTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLAGACAAHSFAQLETSAGTTDL*ERCFLF Trigger: AAAGAGAAAACATCGCTCTCAAAGATCTGTAGTGCC...TGCTGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | TCTATGTCCAATTTTCTGAGGAAATGCCAGACTGATTTCCAGAGTGGTTGTACCATCCAGGCTGCGCACTaGCCTGGGGCCAGGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMSNFLRKCQTDFQSGCTIQAAH*PGARML Trigger: AAGCATCCTGGCCCCAGGGCAGTGCGCAGCCTGGAT...GGTACAACCACTCTGGAAATCAGTCTGGCATTTCCTCAGAAAATTGGACATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTGGAGGACAACTGGGTTCTTTCTAGCTTCTGCCTATTAAAAATAAGCATGGGCTGCGCACTGCCCTaGGGCCAGGATGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLEDNWVLSSFCLLKISMGCALP*GQDASQ Trigger: CTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCC...CATGCTTATTTTTAATAGGCAGAAGCTAGAAAGAACCCAGTTGTCCTCCAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR TCA 90 bp | GACGGACCCATTCTCTGCAGCGGTCCCTGGGAAGTCCCCCTAATAATAAGAAAGTCTGGTACCCACAGGTaGGAACTTCAGCTACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: DGPILCSGPWEVPLIIRKSGTHR*ELQLHY Trigger: ATAATGTAGCTGAAGTTCTCACCTGTGGGTACCAGA...CTTTCTTATTATTAGGGGGACTTCCCAGGGACCGCTGCAGAGAATGGGTCCGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | TTCAACTTGGCTGGGGCATGTGCAGCTCACAGCTTTGCCCAGCTGGAAACCTCAGGCACTACAGATCTTTaGGAGCGATGTTTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNLAGACAAHSFAQLETSGTTDL*ERCFLF Trigger: AAAGAGAAAACATCGCTCTCAAAGATCTGTAGTGCC...TGAGGTTTCCAGCTGGGCAAAGCTGTGAGCTGCACATGCCCCAGCCAAGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCATGGTCTCACTGTAATGTGGTCTTTTTATAGCTCTCAAGAGGGAGGCAGGTCACCTGTCGGATaGGATGCAAATGCCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQHGLTVMWSFYSSQEGGRSPVG*DANARS Trigger: ACTCCTGGCATTTGCATCTCATCCGACAGGTGACCT...GCCTCCCTCTTGAGAGCTATAAAAAGACCACATTACAGTGAGACCATGCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR CCA 90 bp | TATAGCTCTCAAGAGGGAGGCCAGGGGCTGTGTCCTCCAGCAGCAAGCTGCAGGCCTACACAAAAGATGTaGATAAGAGCCCAAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: YSSQEGGQGLCPPAASCRPTQKM*IRAQKY Trigger: ATATTTTTGGGCTCTTATCCACATCTTTTGTGTAGG...CCTGCAGCTTGCTGCTGGAGGACACAGCCCCTGGCCTCCCTCTTGAGAGCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR CCA 90 bp | TTGCTACATGTTGGAGCATCTTCTGGGTATATGCTCAGGAGTGGTATAGCTGGGATCCCAAAACTCCACTaGCACAGCAGCTGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLHVGASSGYMLRSGIAGIPKLH*HSSCHG Trigger: TCCATGGCAGCTGCTGTGCCAGTGGAGTTTTGGGAT...CCCAGCTATACCACTCCTGAGCATATACCCAGAAGATGCTCCAACATGTAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCAGAAAAATCAAAGGGTATAAGAGACTCCAAGATGTAAAGACACAAAACGGCTGCGCACTGCCCTaGGGCCAGGATGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRKIKGYKRLQDVKTQNGCALP*GQDASQ Trigger: CTGAGAAGCATCCTGGCCCCAGGGCAGTGCGCAGCC...GTTTTGTGTCTTTACATCTTGGAGTCTCTTATACCCTTTGATTTTTCTGGAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR GCA 90 bp | GCTACATGTTGGAGCATCTTCTGGGTATATGCTCAGGAGTGGTATAGCTGGGTACACTGGCACAGCAGCTaGCATGGAACCTGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATCWSIFWVYAQEWYSWVHWHSS*HGTCRN Trigger: ATTTCTACAGGTTCCATGGCAGCTGCTGTGCCAGTG...TACCCAGCTATACCACTCCTGAGCATATACCCAGAAGATGCTCCAACATGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGACACAGCCATCCCATTAAGACCCTCTGCTTCTTGATCCCGCAGAACTGGGTAGAAATACAAGAATaGAAAGTCCAGGGCACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGHSHPIKTLCFLIPQNWVEIQE*KVQGTE Trigger: TTCGGTGCCCTGGACTTTCCATTCTTGTATTTCTAC...CCAGTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGGATGGCTGTGTCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR CCA 90 bp | GACGGACCCATTCTCTGCAGCGGTCCCTGGGAAGTCCCCCTAATAATAAGAAAGGTAGAAATACAAGAATaGAAAGTCCAGGGCACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: DGPILCSGPWEVPLIIRKVEIQE*KVQGTE Trigger: TTCGGTGCCCTGGACTTTCCATTCTTGTATTTCTAC...CTTTCTTATTATTAGGGGGACTTCCCAGGGACCGCTGCAGAGAATGGGTCCGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGAGATGGTTCAGCATATAAGACGGACCCATTCTCTGCAGCGGTCCCTGAGTTTCCATGACATATaGAGCAAAAGTCCACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: REEMVQHIRRTHSLQRSLSFHDI*SKSPPM Trigger: CATTGGTGGACTTTTGCTTCATATGTCATGGAAACT...CAGGGACCGCTGCAGAGAATGGGTCCGTCTTATATGCTGAACCATCTCCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCACTGTAATGTGGTCTTTTTATCACTGGCACAGCAGCTaGCATGGAACCTGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALPSWKPQHGLTVMWSFYHWHSS*HGTCRN Trigger: ATTTCTACAGGTTCCATGGCAGCTGCTGTGCCAGTG...ATAAAAAGACCACATTACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTAATAATAAGAAAGTGGGCTGTTGCAATCATCAGCCATCCATGTGTTCAAATCCCAAAACTCCACTaGCACAGCAGCTGCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLIIRKWAVAIISHPCVQIPKLH*HSSCHG Trigger: TCCATGGCAGCTGCTGTGCCAGTGGAGTTTTGGGAT...TTGAACACATGGATGGCTGATGATTGCAACAGCCCACTTTCTTATTATTAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
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| 3UTR CAA 72 bp | CACCTGCCCTGTCCCACATGTCATAACATACATGTCTaGTTTTGTGTGGGAAGGCATGGGCTCCAGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLPCPTCHNIHV*FCVGRHGLQKN Trigger: ATTTTTCTGGAGCCCATGCCTTCCCACACAAAACAAGACATGTATGTTATGACATGTGGGACAGGGCAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| CDS-3UTR TCA 90 bp | AACTGGGTTCTTTCTAGCTTCTGCCTATTAAAAATAAGCATGCGTCCTTGCTACAGGTCACCTGTCGGATaGGATGCAAATGCCAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NWVLSSFCLLKISMRPCYRSPVG*DANARS Trigger: ACTCCTGGCATTTGCATCTCATCCGACAGGTGACCT...GTAGCAAGGACGCATGCTTATTTTTAATAGGCAGAAGCTAGAAAGAACCCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
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| CDS-3UTR GCA 90 bp | ATGTTCAATGGTCTACAGATTCAACACATCCTGACAAACTCAAAAGAACAAGAGGAAGGGAAGGCACCCTaGAGCAGCCAAGAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MFNGLQIQHILTNSKEQEEGKAP*SSQEEE Trigger: CTCTTCCTCTTGGCTGCTGCAGGGTGCCTTCCCTTC...CTCTTGTTCTTTTGAGTTTGTCAGGATGTGTTGAATCTGTAGACCATTGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| CDS-3UTR GCA 90 bp | AAGTCTTGGAACATTTTCACCTTAAATGATGAGCAGAGATCAGGAAAGGACAGGGCACCATCCCACAGTTaGTTTGGTCAGGGCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: KSWNIFTLNDEQRSGKDRAPSHS*FGQGHI Trigger: GATATGGCCCTGACCAAAGCAACTGTGGGATGGTGC...CCTGTCCTTTCCTGATCTCTGCTCATCATTTAAGGTGAAAATGTTCCAAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055447.14 |
||
| CDS-3UTR CCA 90 bp | ATGTCTTGTTTTGTGTGGGAAGGCATGGGCTCCAGAAAAATCAAAGGGTATAAGAGAGCGATGTTTTCTTaGACTGCTGTGGAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MSCFVWEGMGSRKIKGYKRAMFS*TAVELH Trigger: GTGGAGCTCCACAGCAGTCCAAGAAAACATCGCTCT...CTTATACCCTTTGATTTTTCTGGAGCCCATGCCTTCCCACACAAAACAAGACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| CDS-3UTR CCA 90 bp | CTGGTAGGACACAGCCATCCCATTAAGACCCTCTGCTTCTTGATCCCGCAGAACCCTACACAAAAGATGTaGATAAGAGCCCAAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LVGHSHPIKTLCFLIPQNPTQKM*IRAQKY Trigger: ATATTTTTGGGCTCTTATCCACATCTTTTGTGTAGG...GTTCTGCGGGATCAAGAAGCAGAGGGTCTTAATGGGATGGCTGTGTCCTACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS-3UTR CCA 90 bp | TGCGTCCTTGCTACATGTTGGAGCATCTTCTGGGTATATGCTCAGGAGTGGTATGTAGAAATACAAGAATaGAAAGTCCAGGGCACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVLATCWSIFWVYAQEWYVEIQE*KVQGTE Trigger: TTCGGTGCCCTGGACTTTCCATTCTTGTATTTCTAC...ATACCACTCCTGAGCATATACCCAGAAGATGCTCCAACATGTAGCAAGGACGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| 3UTR CAA 72 bp | AGGAGAGTCGAGTTAGCTCAGCAGTTAAGATCACTTTaGCAGAGCATGAGTTCAATTCACAGCAGTCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVELAQQLRSL*QSMSSIHSSHV Trigger: CACGTGACTGCTGTGAATTGAACTCATGCTCTGCAAAAGTGATCTTAACTGCTGAGCTAACTCGACTCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | TCTATGTCCAATTTTCTGAGGAAATGCCAGACTGATTTCCAGAGTGGTTGTACCCGGATGAGATGCAAATaGCAGGAGTACCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SMSNFLRKCQTDFQSGCTRMRCK*QEYHAE Trigger: TTCAGCATGGTACTCCTGGCATTTGCATCTCATCCG...GGTACAACCACTCTGGAAATCAGTCTGGCATTTCCTCAGAAAATTGGACATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR GCA 90 bp | TCTATGTCCAATTTTCTGAGGAAATGCCAGACTGATTTCCAGAGTGGTTGTACCACCTGTCGGATGAGATaGAAATGCCAGGAGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SMSNFLRKCQTDFQSGCTTCRMR*KCQEYH Trigger: ATGGTACTCCTGGCATTTGCATCTCATCCGACAGGT...GGTACAACCACTCTGGAAATCAGTCTGGCATTTCCTCAGAAAATTGGACATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR GCA 90 bp | CACTTCTGGTACCCACAGGTGAGAACTTCAGCTACATTATGCAAAATGAAAAACCCACCAATGAATGTCTaGCACCTTGTTGGTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFWYPQVRTSATLCKMKNPPMNV*HLVGEV Trigger: CACCTCACCAACAAGGTGGCAGACATTCATTGGTGG...GTTTTTCATTTTGCATAATGTAGCTGAAGTTCTCACCTGTGGGTACCAGAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234833.2 |
||
| CDS-3UTR CCA 90 bp | GACCAGAGTTTGTCTCCCAGAACCCACACTGGGCAGCTCATAACTTCCTGTAATCCAAAAATATCCATCTaGATCAAACTGAGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DQSLSPRTHTGQLITSCNPKISI*IKLRVL Trigger: CAAGACTCTCAGTTTGATCCAGATGGATATTTTTGG...ATTACAGGAAGTTATGAGCTGCCCAGTGTGGGTTCTGGGAGACAAACTCTGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
||
| CDS-3UTR TCA 90 bp | GCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCACTGTAATGTGGTCTTTTTATAGTTTCCATGACATATaGAGCAAAAGTCCACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALPSWKPQHGLTVMWSFYSFHDI*SKSPPM Trigger: CATTGGTGGACTTTTGCTTCATATGTCATGGAAACT...ATAAAAAGACCACATTACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | CCCAAAATGCAACAAGATTCCATGGACTGTGACATCAATTCCAAAGCAGTAACTACCTGTCGGATGAGATaGAAATGCCAGGAGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKMQQDSMDCDINSKAVTTCRMR*KCQEYH Trigger: ATGGTACTCCTGGCATTTGCATCTCATCCGACAGGT...AGTTACTGCTTTGGAATTGATGTCACAGTCCATGGAATCTTGTTGCATTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR CCA 90 bp | GCTACATGTTGGAGCATCTTCTGGGTATATGCTCAGGAGTGGTATAGCTGGGTACCAAAAATATCCATCTaGATCAAACTGAGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATCWSIFWVYAQEWYSWVPKISI*IKLRVL Trigger: CAAGACTCTCAGTTTGATCCAGATGGATATTTTTGG...TACCCAGCTATACCACTCCTGAGCATATACCCAGAAGATGCTCCAACATGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCTCAGCAGTTAAGATCACTTTTGCAGAGCATGAGTTCAATTCACAGCAGATCCCACAGTTGCTTTaGTCAGGGCCATATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VSSAVKITFAEHEFNSQQIPQLL*SGPYQT Trigger: TGTTTGATATGGCCCTGACCAAAGCAACTGTGGGAT...CTGCTGTGAATTGAACTCATGCTCTGCAAAAGTGATCTTAACTGCTGAGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055447.14 |
||
| CDS-3UTR CCA 90 bp | TCTATGTCCAATTTTCTGAGGAAATGCCAGACTGATTTCCAGAGTGGTTGTACCATCCCACAGTTGCTTTaGTCAGGGCCATATCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SMSNFLRKCQTDFQSGCTIPQLL*SGPYQT Trigger: TGTTTGATATGGCCCTGACCAAAGCAACTGTGGGAT...GGTACAACCACTCTGGAAATCAGTCTGGCATTTCCTCAGAAAATTGGACATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
||
| CDS-3UTR GCA 90 bp | AAACCTCAGCATGGTCTCACTGTAATGTGGTCTTTTTATAGCTCTCAAGAGGGACCACCAATGAATGTCTaGCACCCTTGGAATAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPQHGLTVMWSFYSSQEGPPMNV*HPWNNV Trigger: TACATTATTCCAAGGGTGGCAGACATTCATTGGTGG...TCCCTCTTGAGAGCTATAAAAAGACCACATTACAGTGAGACCATGCTGAGGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR GCA 90 bp | AAACAACTCCCCAAAATGCAACAAGATTCCATGGACTGTGACATCAATTCCAAACGGATGAGATGCAAATaGCAGGAGTACCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKMQQDSMDCDINSKRMRCK*QEYHAE Trigger: TTCAGCATGGTACTCCTGGCATTTGCATCTCATCCG...TTTGGAATTGATGTCACAGTCCATGGAATCTTGTTGCATTTTGGGGAGTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000209859.2 |
||
| CDS-3UTR GCA 90 bp | AAACAACTCCCCAAAATGCAACAAGATTCCATGGACTGTGACATCAATTCCAAACCACCAATGAATGTCTaGCACCCTTGGAATAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KQLPKMQQDSMDCDINSKPPMNV*HPWNNV Trigger: TACATTATTCCAAGGGTGGCAGACATTCATTGGTGG...TTTGGAATTGATGTCACAGTCCATGGAATCTTGTTGCATTTTGGGGAGTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
||
| CDS-3UTR CCA 90 bp | AACATACATGTCTTGTTTTGTGTGGGAAGGCATGGGCTCCAGAAAAATCAAAGGCCAAAAATATCCATCTaGATCAAACTGAGAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: NIHVLFCVGRHGLQKNQRPKISI*IKLRVL Trigger: CAAGACTCTCAGTTTGATCCAGATGGATATTTTTGG...CCTTTGATTTTTCTGGAGCCCATGCCTTCCCACACAAAACAAGACATGTATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| CDS-3UTR CCA 90 bp | CAACAAGATTCCATGGACTGTGACATCAATTCCAAAGCAGTAACTGGTAGGACACCAAAAATATCCATCTaGATCAAACTGAGAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QQDSMDCDINSKAVTGRTPKISI*IKLRVL Trigger: CAAGACTCTCAGTTTGATCCAGATGGATATTTTTGG...TGTCCTACCAGTTACTGCTTTGGAATTGATGTCACAGTCCATGGAATCTTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS-3UTR CCA 90 bp | TTGGAGGACAACTGGGTTCTTTCTAGCTTCTGCCTATTAAAAATAAGCATGCGTCCTACACAAAAGATGTaGATAAGAGCCCAAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: LEDNWVLSSFCLLKISMRPTQKM*IRAQKY Trigger: ATATTTTTGGGCTCTTATCCACATCTTTTGTGTAGG...ACGCATGCTTATTTTTAATAGGCAGAAGCTAGAAAGAACCCAGTTGTCCTCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
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| CDS-3UTR CCA 90 bp | AAGTCTTGGAACATTTTCACCTTAAATGATGAGCAGAGATCAGGAAAGGACAGGCCTACACAAAAGATGTaGATAAGAGCCCAAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: KSWNIFTLNDEQRSGKDRPTQKM*IRAQKY Trigger: ATATTTTTGGGCTCTTATCCACATCTTTTGTGTAGG...CCTGTCCTTTCCTGATCTCTGCTCATCATTTAAGGTGAAAATGTTCCAAGACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| CDS TCA 90 bp | AAGGCACCCTGCAGCAGCCAAGAGGAAGAGGGCACTACAGATCTTTaGGAGCGATGTTTTCTTGGACTGCTGTGGAGCTCCACCCATCCT | + |
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Preference number: 5 (lower is better) Translates to: KAPCSSQEEEGTTDL*ERCFLGLLWSSTHP Trigger: AGGATGGGTGGAGCTCCACAGCAGTCCAAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCAGGGTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| CDS TCA 90 bp | AAGGCACCCTGCAGCAGCCAAGAGGAAGAGGGCACTACAGATCTTTaGGAGCGATGTTTTCTCTTTCCAGACACACTTCTGGTACCCACA | + |
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Preference number: 5 (lower is better) Translates to: KAPCSSQEEEGTTDL*ERCFLFPDTLLVPT Trigger: TGTGGGTACCAGAAGTGTGTCTGGAAAGAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCAGGGTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS-3UTR CAA 90 bp | CCTCAGCATGGTCTCACTGTAATGTGGTCTTTTTATAGCTCTCAAGAGGGAGGCATCAAACTGAGAGTCTaGGAAGGGAAGGCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PQHGLTVMWSFYSSQEGGIKLRV*EGKAPC Trigger: GCAGGGTGCCTTCCCTTCCAAGACTCTCAGTTTGAT...GCCTCCCTCTTGAGAGCTATAAAAAGACCACATTACAGTGAGACCATGCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS-3UTR CAA 90 bp | GGAAGTCCCCCTAATAATAAGAAAGTGGGCTGTTGCAATCATCAGCCATCCATGGGCACCATCCCACAGTaGCTTTGGTCAGGGCCATAT | + |
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Preference number: 5 (lower is better) Translates to: GSPPNNKKVGCCNHQPSMGTIPQ*LWSGPY Trigger: ATATGGCCCTGACCAAAGCAACTGTGGGATGGTGCC...CATGGATGGCTGATGATTGCAACAGCCCACTTTCTTATTATTAGGGGGACTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055447.14 |
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| CDS TCA 90 bp | CTTGGACTGCTGTGGAGCTCCACCCATCCTAGTTTCCATGACATATaGAGCAAAAGTCCACCAATGAATGTCTGCCACCTTGTTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LGLLWSSTHPSFHDI*SKSPPMNVCHLVGE Trigger: CTCACCAACAAGGTGGCAGACATTCATTGGTGGACTTTTGCTTCATATGTCATGGAAACTAGGATGGGTGGAGCTCCACAGCAGTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234833.2 |
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| CDS-3UTR CAA 90 bp | GAGTTCAATTCACAGCAGTCACGTGGCAGCTCACTATCTGTAACTCCAGTTTCTATCAAACTGAGAGTCTaGGAAGGGAAGGCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: EFNSQQSRGSSLSVTPVSIKLRV*EGKAPC Trigger: GCAGGGTGCCTTCCCTTCCAAGACTCTCAGTTTGAT...AGAAACTGGAGTTACAGATAGTGAGCTGCCACGTGACTGCTGTGAATTGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| CDS-3UTR CAA 90 bp | GCTTTGCCCAGCTGGAAACCTCAGCATGGTCTCACTGTAATGTGGTCTTTTTATATCAAACTGAGAGTCTaGGAAGGGAAGGCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ALPSWKPQHGLTVMWSFYIKLRV*EGKAPC Trigger: GCAGGGTGCCTTCCCTTCCAAGACTCTCAGTTTGAT...ATAAAAAGACCACATTACAGTGAGACCATGCTGAGGTTTCCAGCTGGGCAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS-3UTR CAA 90 bp | TCACTATCTGTAACTCCAGTTTCTGTAGAGCTGATGGCCTCTTCTGACCTTCACATCAAACTGAGAGTCTaGGAAGGGAAGGCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SLSVTPVSVELMASSDLHIKLRV*EGKAPC Trigger: GCAGGGTGCCTTCCCTTCCAAGACTCTCAGTTTGAT...GTGAAGGTCAGAAGAGGCCATCAGCTCTACAGAAACTGGAGTTACAGATAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000211298.2 |
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| CDS GCA 90 bp | ACAGCGCTGAAGCAGGAAGCCATATCAAAACATCAGATCTTGGACTaGTGTGGAGCTCCACCCATCCTAGTTTCCATGACATATGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: TALKQEAISKHQILD*CGAPPILVSMTYEA Trigger: TGCTTCATATGTCATGGAAACTAGGATGGGTGGAGCTCCACAGCAGTCCAAGATCTGATGTTTTGATATGGCTTCCTGCTTCAGCGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS-3UTR CAA 90 bp | TATTCAGGTAGTTCTATGTCCAATTTTCTGAGGAAATGCCAGACTGATTTCCAGATCAAACTGAGAGTCTaGGAAGGGAAGGCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: YSGSSMSNFLRKCQTDFQIKLRV*EGKAPC Trigger: GCAGGGTGCCTTCCCTTCCAAGACTCTCAGTTTGAT...CTGGAAATCAGTCTGGCATTTCCTCAGAAAATTGGACATAGAACTACCTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209628.2 |
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| CDS CCA 90 bp | CTACAGATCTTTGAGAGCGATGTTTTCTCTTTCCAGACACACTTCTaGTACCCACAGGTGAGAACTTCAGCTACATTATGCAAAATGAAA | + |
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Preference number: 5 (lower is better) Translates to: LQIFESDVFSFQTHF*YPQVRTSATLCKMK Trigger: TTTCATTTTGCATAATGTAGCTGAAGTTCTCACCTGTGGGTACCAGAAGTGTGTCTGGAAAGAGAAAACATCGCTCTCAAAGATCTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS CAA 90 bp | GAAGGCACCCTGCAGCAGCCAAGAGGAAGAGGGCACTACAGATCTTaGAGAGCGATGTTTTCTTGGACTGCTGTGGAGCTCCACCCATCC | + |
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Preference number: 6 (lower is better) Translates to: EGTLQQPRGRGHYRS*RAMFSWTAVELHPS Trigger: GGATGGGTGGAGCTCCACAGCAGTCCAAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCAGGGTGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| CDS TCA 72 bp | TGCAGCAGCCAAGAGGAAGAGGGCACTACAGATCTTTaGGAGCGATGTTTTCTTGGACTGCTGTGGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSSQEEEGTTDL*ERCFLGLLWSS Trigger: GGAGCTCCACAGCAGTCCAAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| CDS GCA 72 bp | TGGATCAAACTGAGAGTCTTGGAAGGGAAGGCACCCTaGAGCAGCCAAGAGGAAGAGGGCACTACAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: WIKLRVLEGKAP*SSQEEEGTTDL Trigger: AAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCAGGGTGCCTTCCCTTCCAAGACTCTCAGTTTGATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209628.2 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS CAA 72 bp | CTGCAGCAGCCAAGAGGAAGAGGGCACTACAGATCTTaGAGAGCGATGTTTTCTTGGACTGCTGTGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQQPRGRGHYRS*RAMFSWTAVEL Trigger: GAGCTCCACAGCAGTCCAAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050228.15 |
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| CDS CAA 72 bp | GCGCTGAAGCAGGAAGCCATATCAAAACATCAGATCTaGGACTGCTGTGGAGCTCCACCCATCCTAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALKQEAISKHQI*DCCGAPPILVS Trigger: GGAAACTAGGATGGGTGGAGCTCCACAGCAGTCCAAGATCTGATGTTTTGATATGGCTTCCTGCTTCAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS TCA 72 bp | TGCAGCAGCCAAGAGGAAGAGGGCACTACAGATCTTTaGGAGCGATGTTTTCTCTTTCCAGACACACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: CSSQEEEGTTDL*ERCFLFPDTLL Trigger: CAGAAGTGTGTCTGGAAAGAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS CAA 72 bp | CTGCAGCAGCCAAGAGGAAGAGGGCACTACAGATCTTaGAGAGCGATGTTTTCTCTTTCCAGACACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LQQPRGRGHYRS*RAMFSLSRHTS Trigger: AGAAGTGTGTCTGGAAAGAGAAAACATCGCTCTCAAAGATCTGTAGTGCCCTCTTCCTCTTGGCTGCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS CAA 90 bp | CCACAAACAGCGCTGAAGCAGGAAGCCATATCAAAACATCAGATCTaGGACTGCTGTGGAGCTCCACCCATCCTAGTTTCCATGACATAT | + |
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Preference number: 6 (lower is better) Translates to: PQTALKQEAISKHQI*DCCGAPPILVSMTY Trigger: ATATGTCATGGAAACTAGGATGGGTGGAGCTCCACAGCAGTCCAAGATCTGATGTTTTGATATGGCTTCCTGCTTCAGCGCTGTTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS TCA 72 bp | TTTGGACCCCGCATAGATTATGCCCACAAACAGCGCTaGAGCAGGAAGCCATATCAAAACATCAGATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: FGPRIDYAHKQR*SRKPYQNIRSW Trigger: CCAAGATCTGATGTTTTGATATGGCTTCCTGCTTCAGCGCTGTTTGTGGGCATAATCTATGCGGGGTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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| CDS CCA 72 bp | ACAAAAGATGTGGATAAGAGCCCAAAAATATCCATCTaGATCAAACTGAGAGTCTTGGAAGGGAAGGCACCC | + |
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Preference number: 6 (lower is better) Translates to: TKDVDKSPKISI*IKLRVLEGKAP Trigger: GGGTGCCTTCCCTTCCAAGACTCTCAGTTTGATCCAGATGGATATTTTTGGGCTCTTATCCACATCTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000050228.15 ENSMUST00000055447.14 ENSMUST00000092075.5 ENSMUST00000209628.2 ENSMUST00000209859.2 ENSMUST00000211298.2 |
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