Pregenerated sensors for TMEM240 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000084845Ensembl transcript IDs: ENSMUST00000127188.3, ENSMUST00000147721.8
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGCCCCTCCAGTCCCACCCTCCAGTCGCACACGCCCCATGCACATaGTCCCGTGTGCAGATGGGCGCAGGCCCTGACACATCCCTCCCC | + |
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Preference number: 1 (lower is better) Translates to: PPLQSHPPVAHAPCT*SRVQMGAGPDTSLP Trigger: GGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCATGGGGCGTGTGCGACTGGAGGGTGGGACTGGAGGGGCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR TCA 90 bp | ACACGCCCCATGCACATGCTCCCGTGTGCAGATGGGCGCAGGCCCTaGCACATCCCTCCCCTCCAGACGGACGGATGGACAACAGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: TRPMHMLPCADGRRP*HIPPLQTDGWTTGV Trigger: AACACCTGTTGTCCATCCGTCCGTCTGGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCATGGGGCGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR-3UTR TCA 90 bp | AGATGGGCGCAGGCCCTGACACATCCCTCCCCTCCAGACGGACGGATGGACAACCCAGGCTGCTGTCCCTaGAGCCCAGAGGCCGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RWAQALTHPSPPDGRMDNPGCCP*SPEAGP Trigger: GGGGCCGGCCTCTGGGCTTCAGGGACAGCAGCCTGG...GTTGTCCATCCGTCCGTCTGGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTCCCGTGTGCAGATGGGCGCAGGCCCTGACACATCCCTCCCCTCCAGACGGACTGGATTTGCCTGCTaGCCACAGCCCAGCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CSRVQMGAGPDTSLPSRRTGFAC*PQPSWP Trigger: TGGCCAGCTGGGCTGTGGCCAGCAGGCAAATCCAGT...CCGTCTGGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCAGATGGGCGCAGGCCCTGACACATCCCTCCCCTCCAGACGGACGGATGGGCCTTAGGCTAGTGTaGACCAGGCCAAGCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VCRWAQALTHPSPPDGRMGLRLV*TRPSLS Trigger: GGAGAGGCTTGGCCTGGTCCACACTAGCCTAAGGCC...CATCCGTCCGTCTGGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGGGCTGGGACACCTGGGGCCACCACATCCTTATTGCTGCTAGGGGCCCGACCTTCCACTGGATTTaGCTGCTGGCCACAGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: SEGWDTWGHHILIAARGPTFHWI*LLATAQ Trigger: CTGGGCTGTGGCCAGCAGGCAAATCCAGTGGAAGGT...CGGGCCCCTAGCAGCAATAAGGATGTGGTGGCCCCAGGTGTCCCAGCCCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR GCA 72 bp | CCCCTCCAGTCCCACCCTCCAGTCGCACACGCCCCATaGACATGCTCCCGTGTGCAGATGGGCGCAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PLQSHPPVAHAP*TCSRVQMGAGP Trigger: AGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCATGGGGCGTGTGCGACTGGAGGGTGGGACTGGAGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR GCA 72 bp | CAGTCCCACCCTCCAGTCGCACACGCCCCATGCACATaGTCCCGTGTGCAGATGGGCGCAGGCCCTGACACA | + |
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Preference number: 3 (lower is better) Translates to: QSHPPVAHAPCT*SRVQMGAGPDT Trigger: TGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCATGGGGCGTGTGCGACTGGAGGGTGGGACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR CCA 72 bp | TCGCACACGCCCCATGCACATGCTCCCGTGTGCAGATaGGCGCAGGCCCTGACACATCCCTCCCCTCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: SHTPHAHAPVCR*AQALTHPSPPD Trigger: GTCTGGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCATGGGGCGTGTGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR CCA 72 bp | CCAGCATACCCTGGGCCTGAGGCCGCAGTCCCGTCTTaGCAGCCGGGCGTCCACGAGGTCCCTTTATATGTG | + |
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Preference number: 3 (lower is better) Translates to: PAYPGPEAAVPS*QPGVHEVPLYV Trigger: CACATATAAAGGGACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTATGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| 3UTR TCA 72 bp | ATGCACATGCTCCCGTGTGCAGATGGGCGCAGGCCCTaGCACATCCCTCCCCTCCAGACGGACGGATGGACA | + |
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Preference number: 3 (lower is better) Translates to: MHMLPCADGRRP*HIPPLQTDGWT Trigger: TGTCCATCCGTCCGTCTGGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR TCA 72 bp | GGAGAATTTACTGGCCAGGCAGGGTGGGCTTCACAGTaGGGGCTGGGACACCTGGGGCCACCACATCCTTAT | + |
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Preference number: 3 (lower is better) Translates to: GEFTGQAGWASQ*GLGHLGPPHPY Trigger: ATAAGGATGTGGTGGCCCCAGGTGTCCCAGCCCTCACTGTGAAGCCCACCCTGCCTGGCCAGTAAATTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| 3UTR CCA 72 bp | ACAGTGCTTTCGCTGAGATGTGGCCTTAGGCTAGTGTaGACCAGGCCAAGCCTCTCCCCACCATGGACCCAC | + |
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Preference number: 3 (lower is better) Translates to: TVLSLRCGLRLV*TRPSLSPPWTH Trigger: GTGGGTCCATGGTGGGGAGAGGCTTGGCCTGGTCCACACTAGCCTAAGGCCACATCTCAGCGAAAGCACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR CCA 90 bp | CCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCCCTCTCGAAGGGCCTGTGTaGCCGCCGGCCCAGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGPEAAVPSWQPGVHEVPLEGPV*PPAQLP Trigger: CGGGAGCTGGGCCGGCGGCCACACAGGCCCTTCGAG...AGGGACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | CATACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGCGGCCACAGTTGCAGTaGCAGACGCGGTCCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: HTLGLRPQSRLGSRASTRRPQLQ*QTRSSP Trigger: GGGCGAGGACCGCGTCTGCCACTGCAACTGTGGCCG...CCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTATG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | AGGGCTGGGACACCTGGGGCCACCACATCCTTATTGCTGCTAGGGGCCCGCCCCCTCGAAGGGCCTGTGTaGCCGCCGGCCCAGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: RAGTPGATTSLLLLGARPLEGPV*PPAQLP Trigger: CGGGAGCTGGGCCGGCGGCCACACAGGCCCTTCGAG...GGGGCGGGCCCCTAGCAGCAATAAGGATGTGGTGGCCCCAGGTGTCCCAGCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR CCA 90 bp | TACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCGCAGGCTGCACAGCTTaGGCAGCCAGGTCCACGAGC | + |
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Preference number: 4 (lower is better) Translates to: YPGPEAAVPSWQPGVHEVAGCTA*AARSTS Trigger: GCTCGTGGACCTGGCTGCCCAAGCTGTGCAGCCTGC...GACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | TACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCAGAGGTGCCGCGGGCTaGGGTGGCCGTTGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: YPGPEAAVPSWQPGVHEVRGAAG*GGRCGR Trigger: TCTACCACAACGGCCACCCCAGCCCGCGGCACCTCT...GACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | TACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCGCGTCCACCACCGACTaGTCCCCGTCGTATGGGATC | + |
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Preference number: 4 (lower is better) Translates to: YPGPEAAVPSWQPGVHEVASTTD*SPSYGI Trigger: GATCCCATACGACGGGGACCAGTCGGTGGTGGACGC...GACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | AGCCGGGCGTCCACGAGGTCCCTTTATATGTGCACGGCAGCCCCGAGTCCTGGGCGGCCACAGTTGCAGTaGCAGACGCGGTCCTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SRASTRSLYMCTAAPSPGRPQLQ*QTRSSP Trigger: GGGCGAGGACCGCGTCTGCCACTGCAACTGTGGCCG...CCCAGGACTCGGGGCTGCCGTGCACATATAAAGGGACCTCGTGGACGCCCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | CCGGGCGTCCACGAGGTCCCTTTATATGTGCACGGCAGCCCCGAGTCCTGGGCAGCAGGCTGCACAGCTTaGGCAGCCAGGTCCACGAGC | + |
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Preference number: 4 (lower is better) Translates to: PGVHEVPLYVHGSPESWAAGCTA*AARSTS Trigger: GCTCGTGGACCTGGCTGCCCAAGCTGTGCAGCCTGC...TGCCCAGGACTCGGGGCTGCCGTGCACATATAAAGGGACCTCGTGGACGCCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR GCA 90 bp | CCGTCTTGGCAGCCGGGCGTCCACGAGGTCCCTTTATATGTGCACGGCAGCCCCGCGCGTACAGCGCAGTaGAGAACGCCGTCCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSWQPGVHEVPLYVHGSPARTAQ*RTPSIH Trigger: GTGGATGGACGGCGTTCTGCACTGCGCTGTACGCGC...GGGGCTGCCGTGCACATATAAAGGGACCTCGTGGACGCCCGGCTGCCAAGACGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR GCA 90 bp | CATACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGAGCTTCTGCTTCACGTaGACCATGTTCCCCGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: HTLGLRPQSRLGSRASTRSFCFT*TMFPVG Trigger: GCCTACGGGGAACATGGTGCACGTGAAGCAGAAGCT...CCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | AGATGGGCGCAGGCCCTGACACATCCCTCCCCTCCAGACGGACGGATGGACAACAGAGGTGCCGCGGGCTaGGGTGGCCGTTGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RWAQALTHPSPPDGRMDNRGAAG*GGRCGR Trigger: TCTACCACAACGGCCACCCCAGCCCGCGGCACCTCT...GTTGTCCATCCGTCCGTCTGGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR TCA 90 bp | TACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCACACCAGGAACCAACTaGTGCAGAAACCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YPGPEAAVPSWQPGVHEVTPGTN*CRNPAA Trigger: TGCTGCTGGGTTTCTGCATCAGTTGGTTCCTGGTGT...GACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | CCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCCCTGGTCGATCTCCTGCTTaGTCACATTGTCTGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: PGPEAAVPSWQPGVHEVPGRSPA*SHCLSQ Trigger: TTGTGACAGACAATGTGACCAAGCAGGAGATCGACC...AGGGACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR GCA 90 bp | TGCACATGCTCCCGTGTGCAGATGGGCGCAGGCCCTGACACATCCCTCCCCTCCAGCTTCTGCTTCACGTaGACCATGTTCCCCGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: CTCSRVQMGAGPDTSLPSSFCFT*TMFPVG Trigger: GCCTACGGGGAACATGGTGCACGTGAAGCAGAAGCT...GGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR CCA 90 bp | TGCACATGCTCCCGTGTGCAGATGGGCGCAGGCCCTGACACATCCCTCCCCTCCCTGGTCCCCGTCGTATaGGATCACGTAGTGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: CTCSRVQMGAGPDTSLPSLVPVV*DHVVDV Trigger: CACATCCACTACGTGATCCCATACGACGGGGACCAG...GGAGGGGAGGGATGTGTCAGGGCCTGCGCCCATCTGCACACGGGAGCATGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR GCA 90 bp | TACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCATAAGGTCGATCTCCTaGTTGGTCACATTGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: YPGPEAAVPSWQPGVHEVIRSIS*LVTLSV Trigger: GACAGACAATGTGACCAAGCAGGAGATCGACCTTAT...GACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CCA 90 bp | TTGGCAGCCGGGCGTCCACGAGGTCCCTTTATATGTGCACGGCAGCCCCGAGTCCTGGTCCCCGTCGTATaGGATCACGTAGTGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: LAAGRPRGPFICARQPRVLVPVV*DHVVDV Trigger: CACATCCACTACGTGATCCCATACGACGGGGACCAG...GACTCGGGGCTGCCGTGCACATATAAAGGGACCTCGTGGACGCCCGGCTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR TCA 90 bp | CCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCCCTTTATATGTGCACGACACCAGGAACCAACTaGTGCAGAAACCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PQSRLGSRASTRSLYMCTTPGTN*CRNPAA Trigger: TGCTGCTGGGTTTCTGCATCAGTTGGTTCCTGGTGT...CGTGCACATATAAAGGGACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR GCA 90 bp | AAAAGAAGAGACAGCACCTTCCACTGGATTTGCCTGCTGGCCACAGCCCAGCTGGCGCGTACAGCGCAGTaGAGAACGCCGTCCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: KRRDSTFHWICLLATAQLARTAQ*RTPSIH Trigger: GTGGATGGACGGCGTTCTGCACTGCGCTGTACGCGC...CAGCTGGGCTGTGGCCAGCAGGCAAATCCAGTGGAAGGTGCTGTCTCTTCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR GCA 90 bp | GTTCAAGAAACAGTGCTTTCGCTGAGATGTGGCCTTAGGCTAGTGTGGACCAGGCCAGCTCCCGCAGGCTaGACAGCTTGGGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VQETVLSLRCGLRLVWTRPAPAG*TAWAAR Trigger: CCTGGCTGCCCAAGCTGTGCAGCCTGCGGGAGCTGG...CCTGGTCCACACTAGCCTAAGGCCACATCTCAGCGAAAGCACTGTTTCTTGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR GCA 90 bp | CTCCAGTCCCACCCTCCAGTCGCACACGCCCCATGCACATGCTCCCGTGTGCAGATAAGGTCGATCTCCTaGTTGGTCACATTGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LQSHPPVAHAPCTCSRVQIRSIS*LVTLSV Trigger: GACAGACAATGTGACCAAGCAGGAGATCGACCTTAT...CTGCACACGGGAGCATGTGCATGGGGCGTGTGCGACTGGAGGGTGGGACTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR CCA 90 bp | CTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCCCTTTATATGGGTCGATCTCCTGCTTaGTCACATTGTCTGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: LRPQSRLGSRASTRSLYMGRSPA*SHCLSQ Trigger: TTGTGACAGACAATGTGACCAAGCAGGAGATCGACC...CATATAAAGGGACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS CCA 90 bp | AGGGCCTGTGTGGCCGCCGGCCCAGCTCCCGCAGGCTGCACAGCTTaGGCAGCCAGGTCCACGAGCCATCATAGCGCCGACCAGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RACVAAGPAPAGCTA*AARSTSHHSADQPS Trigger: GGAGGGCTGGTCGGCGCTATGATGGCTCGTGGACCTGGCTGCCCAAGCTGTGCAGCCTGCGGGAGCTGGGCCGGCGGCCACACAGGCCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CAA 90 bp | TACCCTGGGCCTGAGGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCTGGTGCCGGCCACAGTaGCAGTGGCAGACGCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: YPGPEAAVPSWQPGVHEVWCRPQ*QWQTRS Trigger: GGACCGCGTCTGCCACTGCAACTGTGGCCGGCACCA...GACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCCTCAGGCCCAGGGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS CCA 90 bp | CTTCACGTGCACCATGTTCCCCGTAGGCTCCTCGAAGGGCCTGTGTaGCCGCCGGCCCAGCTCCCGCAGGCTGCACAGCTTGGGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LHVHHVPRRLLEGPV*PPAQLPQAAQLGQP Trigger: TGGCTGCCCAAGCTGTGCAGCCTGCGGGAGCTGGGCCGGCGGCCACACAGGCCCTTCGAGGAGCCTACGGGGAACATGGTGCACGTGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CAA 90 bp | AGCCGGGCGTCCACGAGGTCCCTTTATATGTGCACGGCAGCCCCGAGTCCTGGGTGGTGCCGGCCACAGTaGCAGTGGCAGACGCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SRASTRSLYMCTAAPSPGWCRPQ*QWQTRS Trigger: GGACCGCGTCTGCCACTGCAACTGTGGCCGGCACCA...CCCAGGACTCGGGGCTGCCGTGCACATATAAAGGGACCTCGTGGACGCCCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CAA 90 bp | AGCACCTCTGAGAGCCTGCCTTTGTGTCCTGCTCACGGTGGAGACCAGGCTGCTCGCAGGCTGCACAGCTaGGGCAGCCAGGTCCACGAG | + |
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Preference number: 5 (lower is better) Translates to: STSESLPLCPAHGGDQAARRLHS*GSQVHE Trigger: CTCGTGGACCTGGCTGCCCAAGCTGTGCAGCCTGCG...AGCAGCCTGGTCTCCACCGTGAGCAGGACACAAAGGCAGGCTCTCAGAGGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127188.3 |
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| CDS-3UTR CAA 90 bp | CCGGGCGTCCACGAGGTCCCTTTATATGTGCACGGCAGCCCCGAGTCCTGGGCAAGGTCGATCTCCTGCTaGGTCACATTGTCTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: PGVHEVPLYVHGSPESWARSISC*VTLSVT Trigger: TGTGACAGACAATGTGACCAAGCAGGAGATCGACCT...TGCCCAGGACTCGGGGCTGCCGTGCACATATAAAGGGACCTCGTGGACGCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS CCA 90 bp | AAAGTAGTTCTCAGAGGCGTCCACCACCGACTGGTCCCCGTCGTATaGGATCACGTAGTGGATGTGGTGCCGGCCACAGTTGCAGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: KVVLRGVHHRLVPVV*DHVVDVVPATVAVA Trigger: TGCCACTGCAACTGTGGCCGGCACCACATCCACTACGTGATCCCATACGACGGGGACCAGTCGGTGGTGGACGCCTCTGAGAACTACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS-3UTR CAA 90 bp | GGCCGCAGTCCCGTCTTGGCAGCCGGGCGTCCACGAGGTCCCTTTATATGTGCAAGGTCGATCTCCTGCTaGGTCACATTGTCTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: GRSPVLAAGRPRGPFICARSISC*VTLSVT Trigger: TGTGACAGACAATGTGACCAAGCAGGAGATCGACCT...TGCACATATAAAGGGACCTCGTGGACGCCCGGCTGCCAAGACGGGACTGCGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS GCA 72 bp | ATGGGATCACGTAGTGGATGTGGTGCCGGCCACAGTTaGAGTGGCAGACGCGGTCCTCGCCCCGCAGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: MGSRSGCGAGHS*SGRRGPRPAGA Trigger: CGCACCTGCGGGGCGAGGACCGCGTCTGCCACTGCAACTGTGGCCGGCACCACATCCACTACGTGATCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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| CDS CCA 72 bp | CTCAGAGGCGTCCACCACCGACTGGTCCCCGTCGTATaGGATCACGTAGTGGATGTGGTGCCGGCCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: LRGVHHRLVPVV*DHVVDVVPATV Trigger: AACTGTGGCCGGCACCACATCCACTACGTGATCCCATACGACGGGGACCAGTCGGTGGTGGACGCCTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127188.3 ENSMUST00000147721.8 |
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