Pregenerated sensors for TMEM238L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000085683Ensembl transcript IDs: ENSMUST00000150220.2, ENSMUST00000211300.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACTGTGAGCAGCCCTCATGGCCTGGCTCTGCACCTAGGTGGGCCTaGGTGAACAGGAGAGTCCTGTGTGCTCACTGCTGCCTGCGCATT | + |
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Preference number: 1 (lower is better) Translates to: HCEQPSWPGSAPRWA*VNRRVLCAHCCLRI Trigger: AATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGTTCACGCAGGCCCACCTAGGTGCAGAGCCAGGCCATGAGGGCTGCTCACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR GCA 90 bp | CTGGTGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTaGTGGCAGCAGTATCAGTGGTTTGGCACGGGGAGATTGGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: LVELHGSSALHKLLG*WQQYQWFGTGRLGS Trigger: GGAGCCCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 90 bp | CCCCACTGGTGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTaGGGTGCTGGCAGCAGTATCAGTGGTTTGGCACGGGGAGATTGG | + |
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Preference number: 1 (lower is better) Translates to: PHWWNFMAPLPSTNF*GAGSSISGLARGDW Trigger: CCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCACCAGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 90 bp | GTGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTaGCAGCAGTATCAGTGGTTTGGCACGGGGAGATTGGGCTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: VELHGSSALHKLLGC*QQYQWFGTGRLGSR Trigger: TCTGGAGCCCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 90 bp | TGCCCTCCACAAACTTCTGGGGTGCTGGCAGCAGTATCAGTGGTTTaGCACGGGGAGATTGGGCTCCAGAGAGAGTCCTGGTATTCACAG | + |
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Preference number: 1 (lower is better) Translates to: CPPQTSGVLAAVSVV*HGEIGLQRESWYSQ Trigger: CTGTGAATACCAGGACTCTCTCTGGAGCCCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 90 bp | TCCTCTGCCCTCCACAAACTTCTGGGGTGCTGGCAGCAGTATCAGTaGTTTGGCACGGGGAGATTGGGCTCCAGAGAGAGTCCTGGTATT | + |
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Preference number: 1 (lower is better) Translates to: SSALHKLLGCWQQYQ*FGTGRLGSRESPGI Trigger: AATACCAGGACTCTCTCTGGAGCCCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR TCA 90 bp | GAAGAGAGACCAGGCACTTGGAGTCTAGTGGATGTCAAAGGGACATaGCAACAGTACTGTGGGCCGCATGCTCACGGGAGACCCCGATTT | + |
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Preference number: 1 (lower is better) Translates to: EERPGTWSLVDVKGT*QQYCGPHAHGRPRF Trigger: AAATCGGGGTCTCCCGTGAGCATGCGGCCCACAGTACTGTTGTCATGTCCCTTTGACATCCACTAGACTCCAAGTGCCTGGTCTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR GCA 90 bp | GAACAGGAGAGTCCTGTGTGCTCACTGCTGCCTGCGCATTCATGTTaGAGTCTCCATGTTGGAATTGGCTTCTGTGTATCCCCTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: EQESPVCSLLPAHSC*SLHVGIGFCVSPQW Trigger: CCACTGAGGGGATACACAGAAGCCAATTCCAACATGGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 90 bp | CACTTGGAGTCTAGTGGATGTCAAAGGGACATGACAACAGTACTGTaGGCCGCATGCTCACGGGAGACCCCGATTTCAGTTGGCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: HLESSGCQRDMTTVL*AACSRETPISVGSS Trigger: AGAACTGCCAACTGAAATCGGGGTCTCCCGTGAGCATGCGGCCCACAGTACTGTTGTCATGTCCCTTTGACATCCACTAGACTCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR GCA 90 bp | TCTAGTGGATGTCAAAGGGACATGACAACAGTACTGTGGGCCGCATaGTCACGGGAGACCCCGATTTCAGTTGGCAGTTCTTTGAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SSGCQRDMTTVLWAA*SRETPISVGSSLKR Trigger: TCTTTTCAAAGAACTGCCAACTGAAATCGGGGTCTCCCGTGAGCATGCGGCCCACAGTACTGTTGTCATGTCCCTTTGACATCCACTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR TCA 90 bp | TCACGGGAGACCCCGATTTCAGTTGGCAGTTCTTTGAAAAGACTTTaGCCAGAGGTTTCTTTGGTATCTAAGCCAGGAGTGGAGTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: SRETPISVGSSLKRL*PEVSLVSKPGVEWF Trigger: GAACCACTCCACTCCTGGCTTAGATACCAAAGAAACCTCTGGTCAAAGTCTTTTCAAAGAACTGCCAACTGAAATCGGGGTCTCCCGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR TCA 90 bp | TGGATACTATCGGAGGGTGTGCTGCAAAGACTGCATACCTTGATTTaGTTCTTCTGGGCCAGACAGACCCATGCAATTTCTCTTGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: WILSEGVLQRLHTLI*FFWARQTHAISLGV Trigger: TACTCCAAGAGAAATTGCATGGGTCTGTCTGGCCCAGAAGAATCAAATCAAGGTATGCAGTCTTTGCAGCACACCCTCCGATAGTATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR GCA 90 bp | GATCTGAGACTCAGATTTCTTCCATCTGTAAACTGGAGCTTTGAGTaGTTTGTTCTGAGTTGGAAGCATGAGTGGGACCTGGTCTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: DLRLRFLPSVNWSFE*FVLSWKHEWDLVLV Trigger: CACTAAGACCAGGTCCCACTCATGCTTCCAACTCAGAACAAAGCACTCAAAGCTCCAGTTTACAGATGGAAGAAATCTGAGTCTCAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR GCA 90 bp | AAGACTGCATACCTTGATTTGATTCTTCTGGGCCAGACAGACCCATaGAATTTCTCTTGGAGTACTTTAAACAGATCTGAGACTCAGATT | + |
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Preference number: 1 (lower is better) Translates to: KTAYLDLILLGQTDP*NFSWSTLNRSETQI Trigger: AATCTGAGTCTCAGATCTGTTTAAAGTACTCCAAGAGAAATTGCATGGGTCTGTCTGGCCCAGAAGAATCAAATCAAGGTATGCAGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR CCA 90 bp | CTTGATTTGATTCTTCTGGGCCAGACAGACCCATGCAATTTCTCTTaGAGTACTTTAAACAGATCTGAGACTCAGATTTCTTCCATCTGT | + |
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Preference number: 1 (lower is better) Translates to: LDLILLGQTDPCNFS*STLNRSETQISSIC Trigger: ACAGATGGAAGAAATCTGAGTCTCAGATCTGTTTAAAGTACTCCAAGAGAAATTGCATGGGTCTGTCTGGCCCAGAAGAATCAAATCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTGGCAGCAGTATCATTGGCACGGGGAGATTaGGCTCCAGAGAGAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TSWLLCPPQTSGVLAAVSLARGD*APERVL Trigger: CAGGACTCTCTCTGGAGCCCAATCTCCCCGTGCCAA...TGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGGAGAGTCCTGTGTGCTCACTGCTGCCTGCGCATTCATGTTGCAGTCTCCTTGGCACGGGGAGATTaGGCTCCAGAGAGAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NRRVLCAHCCLRIHVAVSLARGD*APERVL Trigger: CAGGACTCTCTCTGGAGCCCAATCTCCCCGTGCCAA...GGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGTCCTGTGTGCTCACTGCTGCCTGCGCATTCATGTTGCAGTCTCCAGTATCCCCTCAGTGGTaGGATGAAGAGAGACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TGESCVLTAACAFMLQSPVSPQW*DEERPG Trigger: GCCTGGTCTCTCTTCATCCCACCACTGAGGGGATAC...TGGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CAA 90 bp | GCTCACTGCTGCCTGCGCATTCATGTTGCAGTCTCCATGTTGGAATaGGCTTCTGTGTATCCCCTCAGTGGTGGGATGAAGAGAGACCAG | + |
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Preference number: 2 (lower is better) Translates to: AHCCLRIHVAVSMLE*ASVYPLSGGMKRDQ Trigger: CTGGTCTCTCTTCATCCCACCACTGAGGGGATACACAGAAGCCAATTCCAACATGGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGGAGAGTCCTGTGTGCTCACTGCTGCCTGCGCATTCATGTTGCAGTCTCCGTTCACATCAGCATATaGCACCTGCATCCCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: NRRVLCAHCCLRIHVAVSVHISI*HLHPSC Trigger: ACAAGAGGGATGCAGGTGGCATATGCTGATGTGAAC...GGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCTCCAGAGAGAGTCCTGGTATTCACAGTCATTCTCGGCTATCCTGGTGGGGGCCAGACAGACCCATaGAATTTCTCTTGGAGTACT | + |
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Preference number: 2 (lower is better) Translates to: WAPERVLVFTVILGYPGGGQTDP*NFSWST Trigger: AGTACTCCAAGAGAAATTGCATGGGTCTGTCTGGCC...CCCACCAGGATAGCCGAGAATGACTGTGAATACCAGGACTCTCTCTGGAGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTGGCAGCAGTATCATGCTTTGTTCTGAGTTaGAAGCATGAGTGGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: TSWLLCPPQTSGVLAAVSCFVLS*KHEWDL Trigger: CAGGTCCCACTCATGCTTCCAACTCAGAACAAAGCA...TGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTGGCAGCAGTATCAGTGGTTTGAACTGGAGCTTTGAGTaGTTTGTTCTGAGTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: APLPSTNFWGAGSSISGLNWSFE*FVLSWK Trigger: CTTCCAACTCAGAACAAAGCACTCAAAGCTCCAGTT...CAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR-3UTR TCA 90 bp | TTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTGGCAGCAGTATCAGTTGTAAACTGGAGCTTTaGGTGCTTTGTTCTGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: FMAPLPSTNFWGAGSSISCKLEL*VLCSEL Trigger: CAACTCAGAACAAAGCACTCAAAGCTCCAGTTTACA...ACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTATAAAAGCCCCACTGGTGGAACTTCATGGCTCCTCTGCCCTCCACAAAGTTCACATCAGCATATaGCACCTGCATCCCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: VPIKAPLVELHGSSALHKVHISI*HLHPSC Trigger: ACAAGAGGGATGCAGGTGGCATATGCTGATGTGAAC...TTTGTGGAGGGCAGAGGAGCCATGAAGTTCCACCAGTGGGGCTTTTATAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAGAGTCCTGTGTGCTCACTGCTGCCTGCGCATTCATGTTGCAGTCTCCATATCTAAGCCAGGAGTaGAGTGGTTCCTATAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: TGESCVLTAACAFMLQSPYLSQE*SGSYKS Trigger: GCTTTTATAGGAACCACTCCACTCCTGGCTTAGATA...TGGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CAA 90 bp | TTGGATACTATCGGAGGGTGTGCTGCAAAGACTGCATACCTTGATTaGATTCTTCTGGGCCAGACAGACCCATGCAATTTCTCTTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LDTIGGCAAKTAYLD*ILLGQTDPCNFSWS Trigger: ACTCCAAGAGAAATTGCATGGGTCTGTCTGGCCCAGAAGAATCAAATCAAGGTATGCAGTCTTTGCAGCACACCCTCCGATAGTATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCCGATTTCAGTTGGCAGTTCTTTGAAAAGACTTTGACCAGAGGTTTCTTTTCAGCATATGCCACCTaGATCCCTCTTGTCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: DPDFSWQFFEKTLTRGFFSAYAT*IPLVHG Trigger: CCCATGGACAAGAGGGATGCAGGTGGCATATGCTGA...AAAGAAACCTCTGGTCAAAGTCTTTTCAAAGAACTGCCAACTGAAATCGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTTGACCAGAGGTTTCTTTGGTATCTAAGCCAGGAGTGGAGTGGTTCCTATTACTATCGGAGGGTGTaGTGCAAAGACTGCATACCT | + |
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Preference number: 2 (lower is better) Translates to: DFDQRFLWYLSQEWSGSYYYRRV*CKDCIP Trigger: AGGTATGCAGTCTTTGCAGCACACCCTCCGATAGTA...ATAGGAACCACTCCACTCCTGGCTTAGATACCAAAGAAACCTCTGGTCAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR TCA 72 bp | CCTCATGGCCTGGCTCTGCACCTAGGTGGGCCTGCGTaGACAGGAGAGTCCTGTGTGCTCACTGCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PHGLALHLGGPA*TGESCVLTAAC Trigger: GCAGGCAGCAGTGAGCACACAGGACTCTCCTGTTCACGCAGGCCCACCTAGGTGCAGAGCCAGGCCATGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR GCA 72 bp | CAGCCCTCATGGCCTGGCTCTGCACCTAGGTGGGCCTaGGTGAACAGGAGAGTCCTGTGTGCTCACTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: QPSWPGSAPRWA*VNRRVLCAHCC Trigger: GCAGCAGTGAGCACACAGGACTCTCCTGTTCACGCAGGCCCACCTAGGTGCAGAGCCAGGCCATGAGGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | TGTGAGCAGCCCTCATGGCCTGGCTCTGCACCTAGGTaGGCCTGCGTGAACAGGAGAGTCCTGTGTGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: CEQPSWPGSAPR*ACVNRRVLCAH Trigger: GTGAGCACACAGGACTCTCCTGTTCACGCAGGCCCACCTAGGTGCAGAGCCAGGCCATGAGGGCTGCTCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR GCA 72 bp | CTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTaGTGGCAGCAGTATCAGTGGTTTGGCACGGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LHGSSALHKLLG*WQQYQWFGTGR Trigger: TCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | CAAACTTCTGGGGTGCTGGCAGCAGTATCAGTGGTTTaGCACGGGGAGATTGGGCTCCAGAGAGAGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: QTSGVLAAVSVV*HGEIGLQRESW Trigger: CCAGGACTCTCTCTGGAGCCCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | CATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTaGCAGCAGTATCAGTGGTTTGGCACGGGGAGATTG | + |
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Preference number: 3 (lower is better) Translates to: HGSSALHKLLGC*QQYQWFGTGRL Trigger: CAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR GCA 72 bp | TGGGCCTGCGTGAACAGGAGAGTCCTGTGTGCTCACTaGTGCCTGCGCATTCATGTTGCAGTCTCCATGTTG | + |
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Preference number: 3 (lower is better) Translates to: WACVNRRVLCAH*CLRIHVAVSML Trigger: CAACATGGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGTTCACGCAGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | CTCCACAAACTTCTGGGGTGCTGGCAGCAGTATCAGTaGTTTGGCACGGGGAGATTGGGCTCCAGAGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LHKLLGCWQQYQ*FGTGRLGSRES Trigger: ACTCTCTCTGGAGCCCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | TGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTaGGGTGCTGGCAGCAGTATCAGTGGTTTGGCACGG | + |
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Preference number: 3 (lower is better) Translates to: WNFMAPLPSTNF*GAGSSISGLAR Trigger: CCGTGCCAAACCACTGATACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCCTCAGTGGTGGGATGAAGAGAGACCAGGCACTTGGAGTCTAGTGGATGTCGCATCTGGGTCCCTCTaGGATACTATCGGAGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: SPQWWDEERPGTWSLVDVASGSL*DTIGGC Trigger: ACACCCTCCGATAGTATCCAAGAGGGACCCAGATGC...GACATCCACTAGACTCCAAGTGCCTGGTCTCTCTTCATCCCACCACTGAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR GCA 72 bp | GCCTGCGTGAACAGGAGAGTCCTGTGTGCTCACTGCTaGCTGCGCATTCATGTTGCAGTCTCCATGTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: ACVNRRVLCAHC*LRIHVAVSMLE Trigger: TTCCAACATGGAGACTGCAACATGAATGCGCAGGCAGCAGTGAGCACACAGGACTCTCCTGTTCACGCAGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCCACTGGTGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCACTGCATACCTTGATTaGATTCTTCTGGGCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: APLVELHGSSALHKLLGCTAYLD*ILLGQT Trigger: TGTCTGGCCCAGAAGAATCAAATCAAGGTATGCAGT...GCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCACCAGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR GCA 72 bp | TGTCAAAGGGACATGACAACAGTACTGTGGGCCGCATaGTCACGGGAGACCCCGATTTCAGTTGGCAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: CQRDMTTVLWAA*SRETPISVGSS Trigger: AGAACTGCCAACTGAAATCGGGGTCTCCCGTGAGCATGCGGCCCACAGTACTGTTGTCATGTCCCTTTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | GCTGGCAGCAGTATCAGTGGTTTGGCACGGGGAGATTaGGCTCCAGAGAGAGTCCTGGTATTCACAGTCATT | + |
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Preference number: 3 (lower is better) Translates to: AGSSISGLARGD*APERVLVFTVI Trigger: AATGACTGTGAATACCAGGACTCTCTCTGGAGCCCAATCTCCCCGTGCCAAACCACTGATACTGCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | GTGGGCCGCATGCTCACGGGAGACCCCGATTTCAGTTaGCAGTTCTTTGAAAAGACTTTGACCAGAGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: VGRMLTGDPDFS*QFFEKTLTRGF Trigger: GAAACCTCTGGTCAAAGTCTTTTCAAAGAACTGCCAACTGAAATCGGGGTCTCCCGTGAGCATGCGGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | TCTAGTGGATGTCAAAGGGACATGACAACAGTACTGTaGGCCGCATGCTCACGGGAGACCCCGATTTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: SSGCQRDMTTVL*AACSRETPISV Trigger: AACTGAAATCGGGGTCTCCCGTGAGCATGCGGCCCACAGTACTGTTGTCATGTCCCTTTGACATCCACTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | ACTGCTGCCTGCGCATTCATGTTGCAGTCTCCATGTTaGAATTGGCTTCTGTGTATCCCCTCAGTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: TAACAFMLQSPC*NWLLCIPSVVG Trigger: TCCCACCACTGAGGGGATACACAGAAGCCAATTCCAACATGGAGACTGCAACATGAATGCGCAGGCAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR-3UTR CAA 90 bp | CCCACTGGTGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTGCCCATGCAATTTCTCTaGGAGTACTTTAAACAGATC | + |
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Preference number: 3 (lower is better) Translates to: PTGGTSWLLCPPQTSGVLPMQFL*EYFKQI Trigger: GATCTGTTTAAAGTACTCCAAGAGAAATTGCATGGG...CAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCACCAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR CCA 72 bp | AGCTTTGAGTGCTTTGTTCTGAGTTGGAAGCATGAGTaGGACCTGGTCTTAGTGGCATTCTGTGTGGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: SFECFVLSWKHE*DLVLVAFCVGA Trigger: AGCCCCCACACAGAATGCCACTAAGACCAGGTCCCACTCATGCTTCCAACTCAGAACAAAGCACTCAAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR CCA 72 bp | CATGTTGGAATTGGCTTCTGTGTATCCCCTCAGTGGTaGGATGAAGAGAGACCAGGCACTTGGAGTCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: HVGIGFCVSPQW*DEERPGTWSLV Trigger: CACTAGACTCCAAGTGCCTGGTCTCTCTTCATCCCACCACTGAGGGGATACACAGAAGCCAATTCCAACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | CTCCATGTTGGAATTGGCTTCTGTGTATCCCCTCAGTaGTGGGATGAAGAGAGACCAGGCACTTGGAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: LHVGIGFCVSPQ*WDEERPGTWSL Trigger: TAGACTCCAAGTGCCTGGTCTCTCTTCATCCCACCACTGAGGGGATACACAGAAGCCAATTCCAACATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | TCTGTAAACTGGAGCTTTGAGTGCTTTGTTCTGAGTTaGAAGCATGAGTGGGACCTGGTCTTAGTGGCATTC | + |
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Preference number: 3 (lower is better) Translates to: SVNWSFECFVLS*KHEWDLVLVAF Trigger: GAATGCCACTAAGACCAGGTCCCACTCATGCTTCCAACTCAGAACAAAGCACTCAAAGCTCCAGTTTACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR CCA 72 bp | TTTGACCAGAGGTTTCTTTGGTATCTAAGCCAGGAGTaGAGTGGTTCCTATAAAAGCCCCACTGGTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: FDQRFLWYLSQE*SGSYKSPTGGT Trigger: AGTTCCACCAGTGGGGCTTTTATAGGAACCACTCCACTCCTGGCTTAGATACCAAAGAAACCTCTGGTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR-3UTR CAA 90 bp | GACTTTGACCAGAGGTTTCTTTGGTATCTAAGCCAGGAGTGGAGTGGTTCCTATACTGCATACCTTGATTaGATTCTTCTGGGCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: DFDQRFLWYLSQEWSGSYTAYLD*ILLGQT Trigger: TGTCTGGCCCAGAAGAATCAAATCAAGGTATGCAGT...ATAGGAACCACTCCACTCCTGGCTTAGATACCAAAGAAACCTCTGGTCAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR TCA 72 bp | GCTCACGGGAGACCCCGATTTCAGTTGGCAGTTCTTTaGAAAGACTTTGACCAGAGGTTTCTTTGGTATCTA | + |
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Preference number: 3 (lower is better) Translates to: AHGRPRFQLAVL*KDFDQRFLWYL Trigger: TAGATACCAAAGAAACCTCTGGTCAAAGTCTTTTCAAAGAACTGCCAACTGAAATCGGGGTCTCCCGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR GCA 72 bp | CTCAGATTTCTTCCATCTGTAAACTGGAGCTTTGAGTaGTTTGTTCTGAGTTGGAAGCATGAGTGGGACCTG | + |
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Preference number: 3 (lower is better) Translates to: LRFLPSVNWSFE*FVLSWKHEWDL Trigger: CAGGTCCCACTCATGCTTCCAACTCAGAACAAAGCACTCAAAGCTCCAGTTTACAGATGGAAGAAATCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR TCA 72 bp | ACCCCGATTTCAGTTGGCAGTTCTTTGAAAAGACTTTaGCCAGAGGTTTCTTTGGTATCTAAGCCAGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: TPISVGSSLKRL*PEVSLVSKPGV Trigger: CACTCCTGGCTTAGATACCAAAGAAACCTCTGGTCAAAGTCTTTTCAAAGAACTGCCAACTGAAATCGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CCA 72 bp | ACAGATCTGAGACTCAGATTTCTTCCATCTGTAAACTaGAGCTTTGAGTGCTTTGTTCTGAGTTGGAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: TDLRLRFLPSVN*SFECFVLSWKH Trigger: ATGCTTCCAACTCAGAACAAAGCACTCAAAGCTCCAGTTTACAGATGGAAGAAATCTGAGTCTCAGATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR CCA 72 bp | ATTCTTCTGGGCCAGACAGACCCATGCAATTTCTCTTaGAGTACTTTAAACAGATCTGAGACTCAGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: ILLGQTDPCNFS*STLNRSETQIS Trigger: AGAAATCTGAGTCTCAGATCTGTTTAAAGTACTCCAAGAGAAATTGCATGGGTCTGTCTGGCCCAGAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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| 3UTR CAA 72 bp | TGTGAAGGCTCCGTCATCGCAGCATCTGGGTCCCTCTaGGATACTATCGGAGGGTGTGCTGCAAAGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: CEGSVIAASGSL*DTIGGCAAKTA Trigger: TGCAGTCTTTGCAGCACACCCTCCGATAGTATCCAAGAGGGACCCAGATGCTGCGATGACGGAGCCTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CAA 72 bp | CACTGCTGCCTGCGCATTCATGTTGCAGTCTCCATGTaGGAATTGGCTTCTGTGTATCCCCTCAGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: HCCLRIHVAVSM*ELASVYPLSGG Trigger: CCCACCACTGAGGGGATACACAGAAGCCAATTCCAACATGGAGACTGCAACATGAATGCGCAGGCAGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| CDS-3UTR TCA 90 bp | CCCACTGGTGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTGTCAAAAGAGCCACAATaGGGAAAAATACACAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: PTGGTSWLLCPPQTSGVLSKEPQ*GKIHSA Trigger: GGCGCTGTGTATTTTTCCTCATTGTGGCTCTTTTGA...CAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCACCAGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| CDS-3UTR TCA 90 bp | TGGAACTTCATGGCTCCTCTGCCCTCCACAAACTTCTGGGGTGCTGGCAGCAGTTCAAAAGAGCCACAATaGGGAAAAATACACAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: WNFMAPLPSTNFWGAGSSSKEPQ*GKIHSA Trigger: GGCGCTGTGTATTTTTCCTCATTGTGGCTCTTTTGA...ACTGCTGCCAGCACCCCAGAAGTTTGTGGAGGGCAGAGGAGCCATGAAGTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000150220.2 ENSMUST00000211300.2 |
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| 3UTR CAA 72 bp | ATCGGAGGGTGTGCTGCAAAGACTGCATACCTTGATTaGATTCTTCTGGGCCAGACAGACCCATGCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: IGGCAAKTAYLD*ILLGQTDPCWS Trigger: AGACCAGCATGGGTCTGTCTGGCCCAGAAGAATCAAATCAAGGTATGCAGTCTTTGCAGCACACCCTCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CAA 72 bp | TGCCTGCGCATTCATGTTGCAGTCTCCATGTTGGAATaGGCTTCTGTGTATCCCCTCAGTGGTGGGATGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLRIHVAVSMLE*ASVYPLSGGMK Trigger: CTTCATCCCACCACTGAGGGGATACACAGAAGCCAATTCCAACATGGAGACTGCAACATGAATGCGCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211300.2 |
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| 3UTR CAA 72 bp | ATCGGAGGGTGTGCTGCAAAGACTGCATACCTTGATTaGATTCTTCTGGGCCAGACAGACCCATGCAATTTC | + |
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Preference number: 4 (lower is better) Translates to: IGGCAAKTAYLD*ILLGQTDPCNF Trigger: GAAATTGCATGGGTCTGTCTGGCCCAGAAGAATCAAATCAAGGTATGCAGTCTTTGCAGCACACCCTCCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150220.2 |
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