Pregenerated sensors for TMEM238 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030431Ensembl transcript IDs: ENSMUST00000168578.3, ENSMUST00000206315.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGACAGGTGGATATCCTGGTGGCCTAGTGATGCACAGGGAAGCTaGATGTCTCAGTCAGGTCCGGAGGATGAGGTGGTCAGAATCCAC | + |
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Preference number: 1 (lower is better) Translates to: GDRWISWWPSDAQGS*MSQSGPEDEVVRIH Trigger: GTGGATTCTGACCACCTCATCCTCCGGACCTGACTGAGACATGCAGCTTCCCTGTGCATCACTAGGCCACCAGGATATCCACCTGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206315.2 |
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| 3UTR CCA 90 bp | TTCTTGGAAGACCTAAACTTCCCTAGGGAAGCCTGGCTGGGTGGGTaGCTCTGCATGCACTGGAGATCCTTCTTCTCGCCTCCCAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: FLEDLNFPREAWLGG*LCMHWRSFFSPPRC Trigger: ACACCTGGGAGGCGAGAAGAAGGATCTCCAGTGCATGCAGAGCCACCCACCCAGCCAGGCTTCCCTAGGGAAGTTTAGGTCTTCCAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 90 bp | AAAGTTCTCTTGCCCCTCAGCACAATGCCTGAGTGGCTACAGAAGTaGAAAACATCCACCAAGGGCTTGAGCTCCCAGAGTCTCCACTGC | + |
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Preference number: 1 (lower is better) Translates to: KVLLPLSTMPEWLQK*KTSTKGLSSQSLHC Trigger: GCAGTGGAGACTCTGGGAGCTCAAGCCCTTGGTGGATGTTTTGCACTTCTGTAGCCACTCAGGCATTGTGCTGAGGGGCAAGAGAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CCA 90 bp | TCTCGAGCTCTCAAAGTTCTCTTGCCCCTCAGCACAATGCCTGAGTaGCTACAGAAGTGCAAAACATCCACCAAGGGCTTGAGCTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SRALKVLLPLSTMPE*LQKCKTSTKGLSSQ Trigger: CTGGGAGCTCAAGCCCTTGGTGGATGTTTTGCACTTCTGTAGCCACTCAGGCATTGTGCTGAGGGGCAAGAGAACTTTGAGAGCTCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR TCA 90 bp | CTAATCTCGAGCTCTCAAAGTTCTCTTGCCCCTCAGCACAATGCCTaGGTGGCTACAGAAGTGCAAAACATCCACCAAGGGCTTGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LISSSQSSLAPQHNA*VATEVQNIHQGLEL Trigger: GAGCTCAAGCCCTTGGTGGATGTTTTGCACTTCTGTAGCCACTCAGGCATTGTGCTGAGGGGCAAGAGAACTTTGAGAGCTCGAGATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 90 bp | AGGAAGCACCGTGGACCGACTAATCTCGAGCTCTCAAAGTTCTCTTaGCCCTCAGCACAATGCCTGAGTGGCTACAGAAGTGCAAAACAT | + |
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Preference number: 1 (lower is better) Translates to: RKHRGPTNLELSKFS*PSAQCLSGYRSAKH Trigger: ATGTTTTGCACTTCTGTAGCCACTCAGGCATTGTGCTGAGGGGCAAGAGAACTTTGAGAGCTCGAGATTAGTCGGTCCACGGTGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR TCA 90 bp | ACCAAGGGCTTGAGCTCCCAGAGTCTCCACTGCCAAACCTTTTCTTaGAAGTGTGTGGTCTACACTCAGATTCAGTCTGCCCACATTCAG | + |
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Preference number: 1 (lower is better) Translates to: TKGLSSQSLHCQTFS*KCVVYTQIQSAHIQ Trigger: CTGAATGTGGGCAGACTGAATCTGAGTGTAGACCACACACTTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGGAGCTCAAGCCCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 90 bp | TGCCCACATTCAGTTCAGTTAGCTCTCTCTCTCTCCTCCTCGTCTTaGAGGCATCCTGCATCAATGCCATCTTCTATATCAGGACCAACC | + |
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Preference number: 1 (lower is better) Translates to: CPHSVQLALSLSSSS*RHPASMPSSISGPT Trigger: GGTTGGTCCTGATATAGAAGATGGCATTGATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCTAACTGAACTGAATGTGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTTCAGTTAGCTCTCTCTCTCTCCTCCTCGTCTTGCAGGCATCCTGCATCTGGCTCTGCATGCACTaGAGATCCTTCTTCTCGCCT | + |
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Preference number: 2 (lower is better) Translates to: FSSVSSLSLLLVLQASCIWLCMH*RSFFSP Trigger: AGGCGAGAAGAAGGATCTCCAGTGCATGCAGAGCCA...GATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCTAACTGAACTGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR GCA 90 bp | ATCCACCAAGGGCTTGAGCTCCCAGAGTCTCCACTGCCAAACCTTTTCTTGAAAGTGGGTGGCTCTGCATaGACTGGAGATCCTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IHQGLELPESPLPNLFLKVGGSA*TGDPSS Trigger: AGAAGAAGGATCTCCAGTGCATGCAGAGCCACCCAC...TTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGGAGCTCAAGCCCTTGGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CAA 90 bp | CTGCCCACATTCAGTTCAGTTAGCTCTCTCTCTCTCCTCCTCGTCTaGCAGGCATCCTGCATCAATGCCATCTTCTATATCAGGACCAAC | + |
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Preference number: 2 (lower is better) Translates to: LPTFSSVSSLSLLLV*QASCINAIFYIRTN Trigger: GTTGGTCCTGATATAGAAGATGGCATTGATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCTAACTGAACTGAATGTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CAA 90 bp | CACCAAGGGCTTGAGCTCCCAGAGTCTCCACTGCCAAACCTTTTCTaGAAAGTGTGTGGTCTACACTCAGATTCAGTCTGCCCACATTCA | + |
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Preference number: 2 (lower is better) Translates to: HQGLELPESPLPNLF*KVCGLHSDSVCPHS Trigger: TGAATGTGGGCAGACTGAATCTGAGTGTAGACCACACACTTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGGAGCTCAAGCCCTTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGCATCAATGCCATCTTCTATATCAGGACCAACCCGCAGTAAATATCTTGCAGATGCACAGGGAAGCTaGATGTCTCAGTCAGGTCCG | + |
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Preference number: 2 (lower is better) Translates to: PASMPSSISGPTRSKYLADAQGS*MSQSGP Trigger: CGGACCTGACTGAGACATGCAGCTTCCCTGTGCATC...TGCAAGATATTTACTGCGGGTTGGTCCTGATATAGAAGATGGCATTGATGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCATCCTGCATCAATGCCATCTTCTATATCAGGACCAACCCGCAGTAAATATTTTATCCAAGTGAGGTaGCAGGTGGATATCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RHPASMPSSISGPTRSKYFIQVR*QVDILV Trigger: CACCAGGATATCCACCTGTCACCTCACTTGGATAAA...ATATTTACTGCGGGTTGGTCCTGATATAGAAGATGGCATTGATGCAGGATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAACAGAAACATTTATCCAAGTGAGGTGACAGGTGGATATCCTGGTGGCCTATTTATCCAAGTGAGGTaGCAGGTGGATATCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: QNRNIYPSEVTGGYPGGLFIQVR*QVDILV Trigger: CACCAGGATATCCACCTGTCACCTCACTTGGATAAA...TAGGCCACCAGGATATCCACCTGTCACCTCACTTGGATAAATGTTTCTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168578.3 ENSMUST00000206315.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGTCTCCACTGCCAAACCTTTTCTTGAAAGTGTGTGGTCTACACTCAGACAGACAGGCAAGCACTaGTCCAAAACAGAAACATTT | + |
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Preference number: 2 (lower is better) Translates to: PRVSTAKPFLESVWSTLRQTGKH*SKTETF Trigger: AAATGTTTCTGTTTTGGAGCAGTGCTTGCCTGTCTG...TCTGAGTGTAGACCACACACTTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAACAGAAACATTTATCCAAGTGAGGTGACAGGTGGATATCCTGGTGGCCTAGTCCGGAGGATGAGGTaGTCAGAATCCACTGATAAT | + |
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Preference number: 2 (lower is better) Translates to: QNRNIYPSEVTGGYPGGLVRRMR*SESTDN Trigger: ATTATCAGTGGATTCTGACCACCTCATCCTCCGGAC...TAGGCCACCAGGATATCCACCTGTCACCTCACTTGGATAAATGTTTCTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206315.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCATCCTGCATCAATGCCATCTTCTATATCAGGACCAACCCGCAGTAAATATAAACATTTATCCAAGTaGGGTGACAGGTGGATATCC | + |
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Preference number: 2 (lower is better) Translates to: RHPASMPSSISGPTRSKYKHLSK*GDRWIS Trigger: GGATATCCACCTGTCACCTCACTTGGATAAATGTTT...ATATTTACTGCGGGTTGGTCCTGATATAGAAGATGGCATTGATGCAGGATGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAACAGAAACATTTATCCAAGTGAGGTGACAGGTGGATATCCTGGTGGCCTACTGATAATGAGTTTATaGCAGGAGAAAGCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QNRNIYPSEVTGGYPGGLLIMSL*QEKAKR Trigger: TCTCTTTGCTTTCTCCTGTCATAAACTCATTATCAG...TAGGCCACCAGGATATCCACCTGTCACCTCACTTGGATAAATGTTTCTGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206315.2 |
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| 3UTR GCA 72 bp | TCCCTAGGGAAGCCTGGCTGGGTGGGTGGCTCTGCATaGACTGGAGATCCTTCTTCTCGCCTCCCAGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: SLGKPGWVGGSA*TGDPSSRLPGV Trigger: GACACCTGGGAGGCGAGAAGAAGGATCTCCAGTGCATGCAGAGCCACCCACCCAGCCAGGCTTCCCTAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 72 bp | AACTTCCCTAGGGAAGCCTGGCTGGGTGGGTGGCTCTaGATGCACTGGAGATCCTTCTTCTCGCCTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NFPREAWLGGWL*MHWRSFFSPPR Trigger: CCTGGGAGGCGAGAAGAAGGATCTCCAGTGCATGCAGAGCCACCCACCCAGCCAGGCTTCCCTAGGGAAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 72 bp | TGGATATCCTGGTGGCCTAGTGATGCACAGGGAAGCTaGATGTCTCAGTCAGGTCCGGAGGATGAGGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: WISWWPSDAQGS*MSQSGPEDEVV Trigger: GACCACCTCATCCTCCGGACCTGACTGAGACATGCAGCTTCCCTGTGCATCACTAGGCCACCAGGATATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168578.3 ENSMUST00000206315.2 |
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| 3UTR CCA 72 bp | GTGTTCTTGGAAGACCTAAACTTCCCTAGGGAAGCCTaGCTGGGTGGGTGGCTCTGCATGCACTGGAGATCC | + |
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Preference number: 3 (lower is better) Translates to: VFLEDLNFPREA*LGGWLCMHWRS Trigger: GGATCTCCAGTGCATGCAGAGCCACCCACCCAGCCAGGCTTCCCTAGGGAAGTTTAGGTCTTCCAAGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CCA 72 bp | CCTACATCCCTAGGGACCCCAAGATCAACGGTGTCTTaGCCTGGCATTTCAGTCCCCTTAACCAGACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PTSLGTPRSTVS*PGISVPLTRQA Trigger: TGCCTGTCTGGTTAAGGGGACTGAAATGCCAGGCCAAGACACCGTTGATCTTGGGGTCCCTAGGGATGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 72 bp | TTGCCCCTCAGCACAATGCCTGAGTGGCTACAGAAGTaGAAAACATCCACCAAGGGCTTGAGCTCCCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LPLSTMPEWLQK*KTSTKGLSSQS Trigger: ACTCTGGGAGCTCAAGCCCTTGGTGGATGTTTTGCACTTCTGTAGCCACTCAGGCATTGTGCTGAGGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 72 bp | AGCTCTCTCTCTCTCCTCCTCGTCTTGCAGGCATCCTaGATCAATGCCATCTTCTATATCAGGACCAACCCG | + |
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Preference number: 3 (lower is better) Translates to: SSLSLLLVLQAS*INAIFYIRTNP Trigger: CGGGTTGGTCCTGATATAGAAGATGGCATTGATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTTCAGTTAGCTCTCTCTCTCTCCTCCTCGTCTTGCAGGCATCCTGCATCAAGATCAACGGTGTCTaGGCCTGGCATTTCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: FSSVSSLSLLLVLQASCIKINGV*AWHFSP Trigger: GGGACTGAAATGCCAGGCCAAGACACCGTTGATCTT...GATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCTAACTGAACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR TCA 72 bp | AGCTCTCAAAGTTCTCTTGCCCCTCAGCACAATGCCTaGGTGGCTACAGAAGTGCAAAACATCCACCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SSQSSLAPQHNA*VATEVQNIHQG Trigger: CCCTTGGTGGATGTTTTGCACTTCTGTAGCCACTCAGGCATTGTGCTGAGGGGCAAGAGAACTTTGAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR GCA 72 bp | CTCTCTCCTCCTCGTCTTGCAGGCATCCTGCATCAATaGCATCTTCTATATCAGGACCAACCCGCAGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: LSPPRLAGILHQ*HLLYQDQPAVN Trigger: ATTTACTGCGGGTTGGTCCTGATATAGAAGATGGCATTGATGCAGGATGCCTGCAAGACGAGGAGGAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CCA 72 bp | GAAGCTGCATGTCTCAGTCAGGTCCGGAGGATGAGGTaGTCAGAATCCACTGATAATGAGTTTATGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: EAACLSQVRRMR*SESTDNEFMTG Trigger: TCCTGTCATAAACTCATTATCAGTGGATTCTGACCACCTCATCCTCCGGACCTGACTGAGACATGCAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206315.2 |
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| 3UTR GCA 72 bp | TCAGTTCAGTTAGCTCTCTCTCTCTCCTCCTCGTCTTaGAGGCATCCTGCATCAATGCCATCTTCTATATCA | + |
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Preference number: 3 (lower is better) Translates to: SVQLALSLSSSS*RHPASMPSSIS Trigger: TGATATAGAAGATGGCATTGATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCTAACTGAACTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR-3UTR CAA 90 bp | CCTGCATCAATGCCATCTTCTATATCAGGACCAACCCGCAGTAAATATCTTGCAAGGGCTAGTAAGCAGTaGAAATCCTACATCCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: PASMPSSISGPTRSKYLARASKQ*KSYIPR Trigger: CCTAGGGATGTAGGATTTCAACTGCTTACTAGCCCT...TGCAAGATATTTACTGCGGGTTGGTCCTGATATAGAAGATGGCATTGATGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR GCA 90 bp | CTACAGAAGTGCAAAACATCCACCAAGGGCTTGAGCTCCCAGAGTCTCCACTGCCCAGCAGCAGCGCCATaGGGCAGCGGCCCAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LQKCKTSTKGLSSQSLHCPAAAP*GSGPSR Trigger: CCGGCTTGGGCCGCTGCCGCATGGCGCTGCTGCTGG...GCAGTGGAGACTCTGGGAGCTCAAGCCCTTGGTGGATGTTTTGCACTTCTGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR GCA 90 bp | TTCAGTTCAGTTAGCTCTCTCTCTCTCCTCCTCGTCTTGCAGGCATCCTGCATCTCGCGGCCGCGCACCTaGAGCTGCGCGAACACGCCG | + |
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Preference number: 4 (lower is better) Translates to: FSSVSSLSLLLVLQASCISRPRT*SCANTP Trigger: CGGCGTGTTCGCGCAGCTGCAGGTGCGCGGCCGCGA...GATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCTAACTGAACTGAA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR GCA 90 bp | GCTACAGAAGTGCAAAACATCCACCAAGGGCTTGAGCTCCCAGAGTCTCCACTGGCGCGCGGTTCGCTCTaGGTGCTGAGCGGAGACCGG | + |
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Preference number: 4 (lower is better) Translates to: ATEVQNIHQGLELPESPLARGSL*VLSGDR Trigger: CCGGTCTCCGCTCAGCACGCAGAGCGAACCGCGCGC...CAGTGGAGACTCTGGGAGCTCAAGCCCTTGGTGGATGTTTTGCACTTCTGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR CCA 90 bp | TCCCTAGGGAAGCCTGGCTGGGTGGGTGGCTCTGCATGCACTGGAGATCCTTCTTCACGCTCCAGCTCCTaGCGCGAGATCTCGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: SLGKPGWVGGSACTGDPSSRSSS*REISML Trigger: CAACATCGAGATCTCGCGCCAGGAGCTGGAGCGTGA...AGAAGGATCTCCAGTGCATGCAGAGCCACCCACCCAGCCAGGCTTCCCTAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR CCA 90 bp | GAGCTCCCAGAGTCTCCACTGCCAAACCTTTTCTTGAAAGTGTGTGGTCTACACCCGGAGGAGGAGGGCTaGGGCGCGCGGTTCGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ELPESPLPNLFLKVCGLHPEEEG*GARFAL Trigger: CAGAGCGAACCGCGCGCCCCAGCCCTCCTCCTCCGG...GTGTAGACCACACACTTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR GCA 90 bp | GAGCTCCCAGAGTCTCCACTGCCAAACCTTTTCTTGAAAGTGTGTGGTCTACACCCGCGCACCTGCAGCTaGGCGAACACGCCGGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: ELPESPLPNLFLKVCGLHPRTCS*ANTPVS Trigger: GCTGACCGGCGTGTTCGCGCAGCTGCAGGTGCGCGG...GTGTAGACCACACACTTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGGAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR GCA 90 bp | CCCAGAGTCTCCACTGCCAAACCTTTTCTTGAAAGTGTGTGGTCTACACTCAGATCAGCAGCGCCGCCATaGCCGCCACGTCCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PRVSTAKPFLESVWSTLRSAAPP*PPRPRP Trigger: TGGCCTTGGACGTGGCGGGCATGGCGGCGCTGCTGA...TCTGAGTGTAGACCACACACTTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR TCA 90 bp | CCTGCATCAATGCCATCTTCTATATCAGGACCAACCCGCAGTAAATATCTTGCAGCGCCCCAGAGTAGATaGGCAGGTCCCCGAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: PASMPSSISGPTRSKYLAAPQSR*AGPRSR Trigger: GCGACTTCGGGGACCTGCTCATCTACTCTGGGGCGC...TGCAAGATATTTACTGCGGGTTGGTCCTGATATAGAAGATGGCATTGATGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CAA 72 bp | GAGTGGCTACAGAAGTGCAAAACATCCACCAAGGGCTaGAGCTCCCAGAGTCTCCACTGCCAAACCTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: EWLQKCKTSTKG*SSQSLHCQTFS Trigger: AGAAAAGGTTTGGCAGTGGAGACTCTGGGAGCTCAAGCCCTTGGTGGATGTTTTGCACTTCTGTAGCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCCTCCTCGTCTTGCAGGCATCCTGCATCAATGCCATCTTCTATATCAGCGAGATCTCGATGTTaGCGGTGTACCAGAGAATCC | + |
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Preference number: 4 (lower is better) Translates to: SLSSSSCRHPASMPSSISARSRC*RCTRES Trigger: GGATTCTCTGGTACACCGGCAACATCGAGATCTCGC...TGATATAGAAGATGGCATTGATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CAA 72 bp | CTTGAGCTCCCAGAGTCTCCACTGCCAAACCTTTTCTaGAAAGTGTGTGGTCTACACTCAGATTCAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LELPESPLPNLF*KVCGLHSDSVC Trigger: GCAGACTGAATCTGAGTGTAGACCACACACTTTCAAGAAAAGGTTTGGCAGTGGAGACTCTGGGAGCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CAA 72 bp | TTCAGTTCAGTTAGCTCTCTCTCTCTCCTCCTCGTCTaGCAGGCATCCTGCATCAATGCCATCTTCTATATC | + |
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Preference number: 4 (lower is better) Translates to: FSSVSSLSLLLV*QASCINAIFYI Trigger: GATATAGAAGATGGCATTGATGCAGGATGCCTGCAAGACGAGGAGGAGAGAGAGAGAGCTAACTGAACTGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| 3UTR CAA 72 bp | CATCTTCTATATCAGGACCAACCCGCAGTAAATATCTaGCAAGTTCAGTGTGCCCCTGTGTGTGTTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: HLLYQDQPAVNI*QVQCAPVCVLG Trigger: TCCAAGAACACACACAGGGGCACACTGAACTTGCAAGATATTTACTGCGGGTTGGTCCTGATATAGAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS GCA 90 bp | CCGCCATGCCCGCCACGTCCAAGGCCACGGCCAGCAGCAGCGCCATaGGGCAGCGGCCCAAGCCGGCCGCTGGAGCCGGTGCGGGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: PPCPPRPRPRPAAAP*GSGPSRPLEPVRAR Trigger: CCGCGCCCGCACCGGCTCCAGCGGCCGGCTTGGGCCGCTGCCGCATGGCGCTGCTGCTGGCCGTGGCCTTGGACGTGGCGGGCATGGCGG 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS CCA 90 bp | CTCTGCGTGCTGAGCGGAGACCGGCTGTGGTCCGGGGACTGGCGGTaGCGGGCGCCGACCAGCGACGGGACAGCTTGCGCGCCAGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: LCVLSGDRLWSGDWR*RAPTSDGTACAPGG Trigger: CCCGCCTGGCGCGCAAGCTGTCCCGTCGCTGGTCGGCGCCCGCCACCGCCAGTCCCCGGACCACAGCCGGTCTCCGCTCAGCACGCAGAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS CCA 90 bp | GCTGGGGCGCGCGGTTCGCTCTGCGTGCTGAGCGGAGACCGGCTGTaGTCCGGGGACTGGCGGTGGCGGGCGCCGACCAGCGACGGGACA | + |
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Preference number: 5 (lower is better) Translates to: AGARGSLCVLSGDRL*SGDWRWRAPTSDGT Trigger: TGTCCCGTCGCTGGTCGGCGCCCGCCACCGCCAGTCCCCGGACCACAGCCGGTCTCCGCTCAGCACGCAGAGCGAACCGCGCGCCCCAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS GCA 90 bp | TCCGGGGACTGGCGGTGGCGGGCGCCGACCAGCGACGGGACAGCTTaGGCGCCAGGCGGGCAATCGCCGAGGGTCGTAGGCCGTAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SGDWRWRAPTSDGTA*APGGQSPRVVGRSH Trigger: GTGACTACGGCCTACGACCCTCGGCGATTGCCCGCCTGGCGCGCAAGCTGTCCCGTCGCTGGTCGGCGCCCGCCACCGCCAGTCCCCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS TCA 90 bp | TCCAGCCCAGCAGGCTCAAGAACACCAGCAGCGCCCCAGAGTAGATaGGCAGGTCCCCGAAGTCGCGGCCGCGCACCTGCAGCTGCGCGA | + |
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Preference number: 5 (lower is better) Translates to: SSPAGSRTPAAPQSR*AGPRSRGRAPAAAR Trigger: TCGCGCAGCTGCAGGTGCGCGGCCGCGACTTCGGGGACCTGCTCATCTACTCTGGGGCGCTGCTGGTGTTCTTGAGCCTGCTGGGCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS GCA 90 bp | GTAGGCCGTAGTCACGCTCCAGCTCCTGGCGCGAGATCTCGATGTTaGCGGTGTACCAGAGAATCCAGCCCAGCAGGCTCAAGAACACCA | + |
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Preference number: 5 (lower is better) Translates to: VGRSHAPAPGARSRC*RCTRESSPAGSRTP Trigger: TGGTGTTCTTGAGCCTGCTGGGCTGGATTCTCTGGTACACCGGCAACATCGAGATCTCGCGCCAGGAGCTGGAGCGTGACTACGGCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS-3UTR CAA 90 bp | CAAAACAGAAACATTTATCCAAGTGAGGTGACAGGTGGATATCCTGGTGGCCTACGCGAGATCTCGATGTaGCCGGTGTACCAGAGAATC | + |
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Preference number: 5 (lower is better) Translates to: QNRNIYPSEVTGGYPGGLREISM*PVYQRI Trigger: GATTCTCTGGTACACCGGCAACATCGAGATCTCGCG...TAGGCCACCAGGATATCCACCTGTCACCTCACTTGGATAAATGTTTCTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS GCA 72 bp | CCTGCCGCCACGGACCCCGCCTCAAGCGTGGCGAGCTaGAGGCGCACGCGGCGGGAGCCGGAGGAGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PAATDPASSVAS*RRTRREPEEEG Trigger: GCCCTCCTCCTCCGGCTCCCGCCGCGTGCGCCTGCAGCTCGCCACGCTTGAGGCGGGGTCCGTGGCGGCAGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS GCA 72 bp | TGGCGGTGGCGGGCGCCGACCAGCGACGGGACAGCTTaGGCGCCAGGCGGGCAATCGCCGAGGGTCGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: WRWRAPTSDGTA*APGGQSPRVVG Trigger: GCCTACGACCCTCGGCGATTGCCCGCCTGGCGCGCAAGCTGTCCCGTCGCTGGTCGGCGCCCGCCACCGCCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS CCA 72 bp | CTGAGCGGAGACCGGCTGTGGTCCGGGGACTGGCGGTaGCGGGCGCCGACCAGCGACGGGACAGCTTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: LSGDRLWSGDWR*RAPTSDGTACA Trigger: CGCGCAAGCTGTCCCGTCGCTGGTCGGCGCCCGCCACCGCCAGTCCCCGGACCACAGCCGGTCTCCGCTCAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS CCA 72 bp | CGCGGTTCGCTCTGCGTGCTGAGCGGAGACCGGCTGTaGTCCGGGGACTGGCGGTGGCGGGCGCCGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: RGSLCVLSGDRL*SGDWRWRAPTS Trigger: GCTGGTCGGCGCCCGCCACCGCCAGTCCCCGGACCACAGCCGGTCTCCGCTCAGCACGCAGAGCGAACCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS TCA 72 bp | GGAGGAGGGCTGGGGCGCGCGGTTCGCTCTGCGTGCTaGGCGGAGACCGGCTGTGGTCCGGGGACTGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GGGLGRAVRSAC*AETGCGPGTGG Trigger: ACCGCCAGTCCCCGGACCACAGCCGGTCTCCGCTCAGCACGCAGAGCGAACCGCGCGCCCCAGCCCTCCTCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS GCA 72 bp | AGCAGGTCCCCGAAGTCGCGGCCGCGCACCTGCAGCTaGGCGAACACGCCGGTCAGCAGCGCCGCCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRSPKSRPRTCS*ANTPVSSAAMP Trigger: GGGCATGGCGGCGCTGCTGACCGGCGTGTTCGCGCAGCTGCAGGTGCGCGGCCGCGACTTCGGGGACCTGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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| CDS TCA 72 bp | GCAGGCTCAAGAACACCAGCAGCGCCCCAGAGTAGATaGGCAGGTCCCCGAAGTCGCGGCCGCGCACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AGSRTPAAPQSR*AGPRSRGRAPA Trigger: TGCAGGTGCGCGGCCGCGACTTCGGGGACCTGCTCATCTACTCTGGGGCGCTGCTGGTGTTCTTGAGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168578.3 |
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