Pregenerated sensors for TMEM236 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061531Ensembl transcript IDs: ENSMUST00000077517.9
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGACTGGGGGAGGGACGAAAGATGGAGGCCAGATACACACAGAGTaGGTGAGGGCACAGGACAGAGGCCGGGAACACTCAGAGTTACTA | + |
|
Preference number: 1 (lower is better) Translates to: ETGGGTKDGGQIHTE*VRAQDRGREHSELL Trigger: TAGTAACTCTGAGTGTTCCCGGCCTCTGTCCTGTGCCCTCACCCACTCTGTGTGTATCTGGCCTCCATCTTTCGTCCCTCCCCCAGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 90 bp | CATCCCTGTAGTTCCAGCATCTGGGAGGTGGAAGCAGGAGGGTGGTaGGTTCAAGTTCAGACTTACCTGGGCTACATAGTGAGTTCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: HPCSSSIWEVEAGGW*VQVQTYLGYIVSSE Trigger: CTCTGAACTCACTATGTAGCCCAGGTAAGTCTGAACTTGAACTCACCACCCTCCTGCTTCCACCTCCCAGATGCTGGAACTACAGGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 90 bp | GCCAGCTGCACCAGCCCAAGAAGCTGTAAGGAAGCTTTGCCAAACTaGTGTGTGCTGAAGACCCTAGTTTTCTATGTAGCTAATGACTTA | + |
|
Preference number: 1 (lower is better) Translates to: ASCTSPRSCKEALPN*CVLKTLVFYVANDL Trigger: TAAGTCATTAGCTACATAGAAAACTAGGGTCTTCAGCACACATCAGTTTGGCAAAGCTTCCTTACAGCTTCTTGGGCTGGTGCAGCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 90 bp | GGTAACCTTGAGATCTTACATGCTACATCTCACAAATTTCAGGCATaGACTATTATTCTCAAAGGCTGGGCAGGGATGTGGGATGGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: GNLEILHATSHKFQA*TIILKGWAGMWDGP Trigger: GGGACCATCCCACATCCCTGCCCAGCCTTTGAGAATAATAGTTCATGCCTGAAATTTGTGAGATGTAGCATGTAAGATCTCAAGGTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR GCA 90 bp | GTAATGTCTCTTAAGTCCCACAGGCTTGAGCTTTATCCACATCTGTaGATTCAGTTAGGCCAGAAACTCAAAGCTTTCCCTGCCTTATAT | + |
|
Preference number: 1 (lower is better) Translates to: VMSLKSHRLELYPHL*IQLGQKLKAFPALY Trigger: ATATAAGGCAGGGAAAGCTTTGAGTTTCTGGCCTAACTGAATGCACAGATGTGGATAAAGCTCAAGCCTGTGGGACTTAAGAGACATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 90 bp | GTGCATTCAGTTAGGCCAGAAACTCAAAGCTTTCCCTGCCTTATATaGTCTGTTTGTTATACATGCCTTCATTACCTGTTTCAAGCATTG | + |
|
Preference number: 1 (lower is better) Translates to: VHSVRPETQSFPCLI*SVCYTCLHYLFQAL Trigger: CAATGCTTGAAACAGGTAATGAAGGCATGTATAACAAACAGATCATATAAGGCAGGGAAAGCTTTGAGTTTCTGGCCTAACTGAATGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 90 bp | AAAGAATCTCTGCTTGGATATGAGTATCTATGCCATCAGAGCACATaGAGAGTTCATGACTGTGTGCATGATCATTGTAACATGAAGATA | + |
|
Preference number: 1 (lower is better) Translates to: KESLLGYEYLCHQST*RVHDCVHDHCNMKI Trigger: TATCTTCATGTTACAATGATCATGCACACAGTCATGAACTCTTCATGTGCTCTGATGGCATAGATACTCATATCCAAGCAGAGATTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAAATTTCAGGCATGAACTATTATTCTCAAAGGCTGGGCAGGGATGTGGGATGTCAACACTGACGCACTaGCAGCTGCACCAGCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TNFRHELLFSKAGQGCGMSTLTH*QLHQPK Trigger: CTTGGGCTGGTGCAGCTGGCAGTGCGTCAGTGTTGA...CATCCCACATCCCTGCCCAGCCTTTGAGAATAATAGTTCATGCCTGAAATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAATTTCAGGCATGAACTATTATTCTCAAAGGCTGGGCAGGGATGTGGGATGCAGATACACACAGAGTaGGTGAGGGCACAGGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: TNFRHELLFSKAGQGCGMQIHTE*VRAQDR Trigger: TCTGTCCTGTGCCCTCACCCACTCTGTGTGTATCTG...CATCCCACATCCCTGCCCAGCCTTTGAGAATAATAGTTCATGCCTGAAATTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CCA 90 bp | AACATCCCCAGATATCAGGCATATCCATGTTTGACTGTCAGACACAAAATGCAGTGTAGTTCCAGCATCTaGGAGGTGGAAGCAGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: NIPRYQAYPCLTVRHKMQCSSSI*EVEAGG Trigger: CCCTCCTGCTTCCACCTCCCAGATGCTGGAACTACA...CTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR TCA 90 bp | AACATCCCCAGATATCAGGCATATCCATGTTTGACTGTCAGACACAAAATGCAGGAAGCTTTGCCAAACTaGTGTGTGCTGAAGACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: NIPRYQAYPCLTVRHKMQEALPN*CVLKTL Trigger: TAGGGTCTTCAGCACACATCAGTTTGGCAAAGCTTC...CTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTACTTATGTGTGTTCATCTTTTTGTACCAGTGGGGGTCACAGCATTCAAGGATGCCATCAGAGCACATaGAGAGTTCATGACTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: STYVCSSFCTSGGHSIQGCHQST*RVHDCV Trigger: CACACAGTCATGAACTCTTCATGTGCTCTGATGGCA...TCCTTGAATGCTGTGACCCCCACTGGTACAAAAAGATGAACACACATAAGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CCA 90 bp | AACATCCCCAGATATCAGGCATATCCATGTTTGACTGTCAGACACAAAATGCAGTCAGGTTTCCTCTTATaGGATTGTCAAGTTAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: NIPRYQAYPCLTVRHKMQSGFLL*DCQVSE Trigger: CTCACTAACTTGACAATCCCATAAGAGGAAACCTGA...CTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTACTTATGTGTGTTCATCTTTTTGTACCAGTGGGGGTCACAGCATTCAAGGAATGATCATTGTAACATaGAGATACTCAGGACCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: STYVCSSFCTSGGHSIQGMIIVT*RYSGPS Trigger: ACTAGGTCCTGAGTATCTTCATGTTACAATGATCAT...TCCTTGAATGCTGTGACCCCCACTGGTACAAAAAGATGAACACACATAAGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAATTCTTTGAGAGCTTACAGAAGTTCTATTCAAGTGAAAGAATGGCTTTCGTGCTACTACTAAGATaGTGTGCCCCGAGTTCAATC | + |
|
Preference number: 2 (lower is better) Translates to: SEFFESLQKFYSSERMAFVLLLR*CAPSSI Trigger: GATTGAACTCGGGGCACACCATCTTAGTAGTAGCAC...GAAAGCCATTCTTTCACTTGAATAGAACTTCTGTAAGCTCTCAAAGAATTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CCA 90 bp | AACATCCCCAGATATCAGGCATATCCATGTTTGACTGTCAGACACAAAATGCAGATGAGTATTGTAAATTaGGTGCTTGGTTGTAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: NIPRYQAYPCLTVRHKMQMSIVN*VLGCKE Trigger: TTCCTTACAACCAAGCACCCAATTTACAATACTCAT...CTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCTTACAGAAGTTCTATTCAAGTGAAAGAATGGCTTTCCATATTCACTTTCTTCAATCCTCACTGCTaGAAACACTCATTTACACAC | + |
|
Preference number: 2 (lower is better) Translates to: RAYRSSIQVKEWLSIFTFFNPHC*KHSFTH Trigger: GTGTGTAAATGAGTGTTTTCAGCAGTGAGGATTGAA...GAAAGTGAATATGGAAAGCCATTCTTTCACTTGAATAGAACTTCTGTAAGCTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGATATATAATCAAAAGCTTTCAGACACACAAACTGCCATCTAGGGTTATGAATCACAATGTACCTTaGCTCCATTATCCTCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: SRYIIKSFQTHKLPSRVMNHNVP*LHYPQH Trigger: GTGTTGAGGATAATGGAGCCAAGGTACATTGTGATT...CATAACCCTAGATGGCAGTTTGTGTGTCTGAAAGCTTTTGATTATATATCTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CCA 72 bp | GGAGGGACGAAAGATGGAGGCCAGATACACACAGAGTaGGTGAGGGCACAGGACAGAGGCCGGGAACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGTKDGGQIHTE*VRAQDRGREHS Trigger: TGAGTGTTCCCGGCCTCTGTCCTGTGCCCTCACCCACTCTGTGTGTATCTGGCCTCCATCTTTCGTCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 72 bp | GGACGAAAGATGGAGGCCAGATACACACAGAGTGGGTaGGGGCACAGGACAGAGGCCGGGAACACTCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GRKMEARYTQSG*GHRTEAGNTQS Trigger: ACTCTGAGTGTTCCCGGCCTCTGTCCTGTGCCCTCACCCACTCTGTGTGTATCTGGCCTCCATCTTTCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 72 bp | AATCACAATGTACCTTGGCTCCATTATCCTCAACACTaGCGCACTGCCAGCTGCACCAGCCCAAGAAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NHNVPWLHYPQH*RTASCTSPRSC Trigger: ACAGCTTCTTGGGCTGGTGCAGCTGGCAGTGCGTCAGTGTTGAGGATAATGGAGCCAAGGTACATTGTGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CCA 72 bp | GTTATGGCTCTGAGGCAGGTGCTTATGTGGCATTGGTaGGCTGGTGAAGGTGTTTTTAATCCTCAGCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: VMALRQVLMWHW*AGEGVFNPQQC Trigger: GCATTGCTGAGGATTAAAAACACCTTCACCAGCCCACCAATGCCACATAAGCACCTGCCTCAGAGCCATAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CCA 72 bp | AGGGTTATGGCTCTGAGGCAGGTGCTTATGTGGCATTaGTGGGCTGGTGAAGGTGTTTTTAATCCTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RVMALRQVLMWH*WAGEGVFNPQQ Trigger: TTGCTGAGGATTAAAAACACCTTCACCAGCCCACCAATGCCACATAAGCACCTGCCTCAGAGCCATAACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 72 bp | ACCAGCCCAAGAAGCTGTAAGGAAGCTTTGCCAAACTaGTGTGTGCTGAAGACCCTAGTTTTCTATGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TSPRSCKEALPN*CVLKTLVFYVA Trigger: AGCTACATAGAAAACTAGGGTCTTCAGCACACATCAGTTTGGCAAAGCTTCCTTACAGCTTCTTGGGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 72 bp | CTGCTTGGATATGAGTATCTATGCCATCAGAGCACATaGAGAGTTCATGACTGTGTGCATGATCATTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLGYEYLCHQST*RVHDCVHDHCN Trigger: GTTACAATGATCATGCACACAGTCATGAACTCTTCATGTGCTCTGATGGCATAGATACTCATATCCAAGCAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CAA 90 bp | AACATCCCCAGATATCAGGCATATCCATGTTTGACTGTCAGACACAAAATGCAGACAAAGAATCTCTGCTaGGATATGAGTATCTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: NIPRYQAYPCLTVRHKMQTKNLC*DMSIYA Trigger: GGCATAGATACTCATATCCAAGCAGAGATTCTTTGT...CTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGTCCATTACAAAGCTTTATCTAGGAATCACAATGTACCTTGGCTCCATTAAGGGATGTAGCTCATaGTTAGGTTTGTGCTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: MVSITKLYLGITMYLGSIKGCSS*LGLCYY Trigger: GTAGTAGCACAAACCTAACAATGAGCTACATCCCTT...AATGGAGCCAAGGTACATTGTGATTCCTAGATAAAGCTTTGTAATGGACACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCTTACAGAAGTTCTATTCAAGTGAAAGAATGGCTTTCCATATTCACTTTCGAATCACAATGTACCTaGGCTCCATTATCCTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: RAYRSSIQVKEWLSIFTFESQCT*APLSST Trigger: TGTTGAGGATAATGGAGCCAAGGTACATTGTGATTC...GAAAGTGAATATGGAAAGCCATTCTTTCACTTGAATAGAACTTCTGTAAGCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACTCAAAGCTTTCCCTGCCTTATATGATCTGTTTGTTATACATGCCTTCACTGTTCATAAGCTATTaGCTTCCACATTACTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RNSKLSLPYMICLLYMPSLFISY*LPHYSA Trigger: TGCAGAGTAATGTGGAAGCAAATAGCTTATGAACAG...TGAAGGCATGTATAACAAACAGATCATATAAGGCAGGGAAAGCTTTGAGTTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR TCA 72 bp | AGTTTCTCTTATAAACAAAGAATCTCTGCTTGGATATaGGTATCTATGCCATCAGAGCACATGAAGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFSYKQRISAWI*VSMPSEHMKSS Trigger: TGAACTCTTCATGTGCTCTGATGGCATAGATACTCATATCCAAGCAGAGATTCTTTGTTTATAAGAGAAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR CCA 90 bp | AGTACTTATGTGTGTTCATCTTTTTGTACCAGTGGGGGTCACAGCATTCAAGGAGTGGGCTTGGCCGCCTaGGCAGATGCAGGATTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: STYVCSSFCTSGGHSIQGVGLAA*ADAGFP Trigger: CGGAAATCCTGCATCTGCCCAGGCGGCCAAGCCCAC...TCCTTGAATGCTGTGACCCCCACTGGTACAAAAAGATGAACACACATAAGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTGTCCATTACAAAGCTTTATCTAGGAATCACAATGTACCTTGGCTCCATTACATCGCAGTGGGCTTaGCCGCCTGGGCAGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MVSITKLYLGITMYLGSITSQWA*PPGQMQ Trigger: CTGCATCTGCCCAGGCGGCCAAGCCCACTGCGATGT...AATGGAGCCAAGGTACATTGTGATTCCTAGATAAAGCTTTGTAATGGACACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR TCA 90 bp | ATGGTGTCCATTACAAAGCTTTATCTAGGAATCACAATGTACCTTGGCTCCATTCCGTGTCGGCCCACATaGGGAAGCTTCGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: MVSITKLYLGITMYLGSIPCRPT*GSFAGT Trigger: TGTTCCTGCGAAGCTTCCTCATGTGGGCCGACACGG...AATGGAGCCAAGGTACATTGTGATTCCTAGATAAAGCTTTGTAATGGACACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCTTACAGAAGTTCTATTCAAGTGAAAGAATGGCTTTCCATATTCACTTTCCTAAGGATCCTAGACTaGAAGGAGGGCTCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAYRSSIQVKEWLSIFTFLRILD*KEGSRG Trigger: GCCCCTGGAGCCCTCCTTTCAGTCTAGGATCCTTAG...GAAAGTGAATATGGAAAGCCATTCTTTCACTTGAATAGAACTTCTGTAAGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR CCA 90 bp | TTACACACACACACAGAGTATAATTTTAAGTTTGAACAAGACCCTACAACTCCAACAAAGGCCCAGTACTaGCGTGATCGTTCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTHTEYNFKFEQDPTTPTKAQY*RDRSQG Trigger: GCCCTGGGAACGATCACGCCAGTACTGGGCCTTTGT...TGGAGTTGTAGGGTCTTGTTCAAACTTAAAATTATACTCTGTGTGTGTGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CAA 72 bp | GTCCCATTAAGTGCCCAGCATTTAAGGGGCTATTATTaGTTCGAAACTGCATTGAGAGCACTCCAATCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSAQHLRGYY*FETALRALQSY Trigger: GTAGGATTGGAGTGCTCTCAATGCAGTTTCGAACAAATAATAGCCCCTTAAATGCTGGGCACTTAATGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR TCA 90 bp | TCTGAATTCTTTGAGAGCTTACAGAAGTTCTATTCAAGTGAAAGAATGGCTTTCAGCTGGGGAGAGTGGTaGGCACAACACACATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SEFFESLQKFYSSERMAFSWGEW*AQHTSP Trigger: TGGTGATGTGTGTTGTGCTCACCACTCTCCCCAGCT...GAAAGCCATTCTTTCACTTGAATAGAACTTCTGTAAGCTCTCAAAGAATTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR TCA 90 bp | AACATCCCCAGATATCAGGCATATCCATGTTTGACTGTCAGACACAAAATGCAGCAAAAACCACCAGCTTaGTTATTTTGCCAGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NIPRYQAYPCLTVRHKMQQKPPA*LFCQKP Trigger: TGGCTTCTGGCAAAATAATCAAGCTGGTGGTTTTTG...CTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR GCA 90 bp | AACATCCCCAGATATCAGGCATATCCATGTTTGACTGTCAGACACAAAATGCAGCATAACCCTTTTGACTaGCTCTTAGAGGATATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIPRYQAYPCLTVRHKMQHNPFD*LLEDIA Trigger: GGCAATATCCTCTAAGAGGCAGTCAAAAGGGTTATG...CTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CAA 72 bp | ATTGCTAACATCCCCAGATATCAGGCATATCCATGTTaGACTGTCAGACACAAAATGCAGACTAACCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: IANIPRYQAYPC*TVRHKMQTNLM Trigger: CATGAGGTTAGTCTGCATTTTGTGTCTGACAGTCAAACATGGATATGCCTGATATCTGGGGATGTTAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR GCA 90 bp | AGAAACTCAAAGCTTTCCCTGCCTTATATGATCTGTTTGTTATACATGCCTTCAACAAAGGGCAAATCTTaGATCAAGATCCCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNSKLSLPYMICLLYMPSTKGKS*IKIPRE Trigger: TTCCCTGGGGATCTTGATGCAAGATTTGCCCTTTGT...TGAAGGCATGTATAACAAACAGATCATATAAGGCAGGGAAAGCTTTGAGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR TCA 90 bp | AGAAACTCAAAGCTTTCCCTGCCTTATATGATCTGTTTGTTATACATGCCTTCATGGAACAGGAAACAATaGGCCAATAGTGAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNSKLSLPYMICLLYMPSWNRKQ*ANSESF Trigger: AAAGGACTCACTATTGGCTCATTGTTTCCTGTTCCA...TGAAGGCATGTATAACAAACAGATCATATAAGGCAGGGAAAGCTTTGAGTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR TCA 90 bp | AGAGCTTACAGAAGTTCTATTCAAGTGAAAGAATGGCTTTCCATATTCACTTTCCCATTGATATTCTTTTaGACCTCGGTGACTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RAYRSSIQVKEWLSIFTFPLIFF*TSVTAM Trigger: CATAGCAGTCACCGAGGTTCAAAAGAATATCAATGG...GAAAGTGAATATGGAAAGCCATTCTTTCACTTGAATAGAACTTCTGTAAGCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CAA 72 bp | AGAAACTCAAAGCTTTCCCTGCCTTATATGATCTGTTaGTTATACATGCCTTCATTACCTGTTTCAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: RNSKLSLPYMIC*LYMPSLPVSSI Trigger: AATGCTTGAAACAGGTAATGAAGGCATGTATAACAAACAGATCATATAAGGCAGGGAAAGCTTTGAGTTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CAA 72 bp | CTCATTTACACACACACACAGAGTATAATTTTAAGTTaGAACAAGACCCTACAACTCCAGTTTTCAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIYTHTQSIILS*NKTLQLQFSDK Trigger: TTTGTCTGAAAACTGGAGTTGTAGGGTCTTGTTCAAACTTAAAATTATACTCTGTGTGTGTGTGTAAATGAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| 3UTR CAA 72 bp | TGGCATCAAACTCTGTTTATGTTACACTCTTACACATaGTTTATGGTGTCCATTACAAAGCTTTATCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHQTLFMLHSYT*FMVSITKLYLG Trigger: TCCTAGATAAAGCTTTGTAATGGACACCATAAACAATGTGTAAGAGTGTAACATAAACAGAGTTTGATGCCA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS TCA 90 bp | CCTGGTGCCCAGCCACACGCAGCATTTCCACCGTGTCGGCCCACATaGGGAAGCTTCGCAGGAACAGCTCCGCCCGAACATCTCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGAQPHAAFPPCRPT*GSFAGTAPPEHLFE Trigger: CTCAAAGAGATGTTCGGGCGGAGCTGTTCCTGCGAAGCTTCCTCATGTGGGCCGACACGGTGGAAATGCTGCGTGTGGCTGGGCACCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS CCA 90 bp | CAAGCACTGCCACATGGTTCCGGGGCTGGGACATCGCAGTGGGCTTaGCCGCCTGGGCAGATGCAGGATTTCCGTCACTCTGAACTACCT | + |
|
Preference number: 5 (lower is better) Translates to: QALPHGSGAGTSQWA*PPGQMQDFRHSELP Trigger: AGGTAGTTCAGAGTGACGGAAATCCTGCATCTGCCCAGGCGGCCAAGCCCACTGCGATGTCCCAGCCCCGGAACCATGTGGCAGTGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS TCA 90 bp | CAGGAGAGAGATAAAACTGAATATGTAGACCGGGTACAGCCAGGCTaGCTTGTACACCGCCTGGTGCCCAGCCACACGCAGCATTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QERDKTEYVDRVQPG*LVHRLVPSHTQHFH Trigger: GTGGAAATGCTGCGTGTGGCTGGGCACCAGGCGGTGTACAAGTCAGCCTGGCTGTACCCGGTCTACATATTCAGTTTTATCTCTCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS TCA 90 bp | GGTAAGGATTCAGGCAACGAATTAGCTGAGCCATTGATATTCTTTTaGACCTCGGTGACTGCTATGGAGAAGCTGAAGCTGGGGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GKDSGNELAEPLIFF*TSVTAMEKLKLGRV Trigger: CACTCTCCCCAGCTTCAGCTTCTCCATAGCAGTCACCGAGGTTCAAAAGAATATCAATGGCTCAGCTAATTCGTTGCCTGAATCCTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAATTCTTTGAGAGCTTACAGAAGTTCTATTCAAGTGAAAGAATGGCTTTCGACATCGCAGTGGGCTaGGCCGCCTGGGCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEFFESLQKFYSSERMAFDIAVG*AAWADA Trigger: TGCATCTGCCCAGGCGGCCAAGCCCACTGCGATGTC...GAAAGCCATTCTTTCACTTGAATAGAACTTCTGTAAGCTCTCAAAGAATTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS-3UTR CAA 90 bp | AGTACTTATGTGTGTTCATCTTTTTGTACCAGTGGGGGTCACAGCATTCAAGGAAACAAAGGGCAAATCTaGCATCAAGATCCCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STYVCSSFCTSGGHSIQGNKGQI*HQDPQG Trigger: TCCCTGGGGATCTTGATGCAAGATTTGCCCTTTGTT...TCCTTGAATGCTGTGACCCCCACTGGTACAAAAAGATGAACACACATAAGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS CCA 72 bp | AGGGGCCCGGCAAGCACTGCCACATGGTTCCGGGGCTaGGACATCGCAGTGGGCTTGGCCGCCTGGGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: RGPASTATWFRG*DIAVGLAAWAD Trigger: ATCTGCCCAGGCGGCCAAGCCCACTGCGATGTCCCAGCCCCGGAACCATGTGGCAGTGCTTGCCGGGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS GCA 72 bp | AGACTGAAAGGAGGGCTCCAGGGGCCCGGCAAGCACTaGCACATGGTTCCGGGGCTGGGACATCGCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLKGGLQGPGKH*HMVPGLGHRSG Trigger: CCCACTGCGATGTCCCAGCCCCGGAACCATGTGGCAGTGCTTGCCGGGCCCCTGGAGCCCTCCTTTCAGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS GCA 72 bp | ACCGGGTACAGCCAGGCTGACTTGTACACCGCCTGGTaGCCAGCCACACGCAGCATTTCCACCGTGTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGYSQADLYTAW*PATRSISTVSA Trigger: GGCCGACACGGTGGAAATGCTGCGTGTGGCTGGGCACCAGGCGGTGTACAAGTCAGCCTGGCTGTACCCGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS CCA 72 bp | GCACTGCCACATGGTTCCGGGGCTGGGACATCGCAGTaGGCTTGGCCGCCTGGGCAGATGCAGGATTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: ALPHGSGAGTSQ*AWPPGQMQDFR Trigger: ACGGAAATCCTGCATCTGCCCAGGCGGCCAAGCCCACTGCGATGTCCCAGCCCCGGAACCATGTGGCAGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS CAA 72 bp | GCCACATGGTTCCGGGGCTGGGACATCGCAGTGGGCTaGGCCGCCTGGGCAGATGCAGGATTTCCGTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: ATWFRGWDIAVG*AAWADAGFPSL Trigger: GAGTGACGGAAATCCTGCATCTGCCCAGGCGGCCAAGCCCACTGCGATGTCCCAGCCCCGGAACCATGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS CCA 72 bp | CCACATGGTTCCGGGGCTGGGACATCGCAGTGGGCTTaGCCGCCTGGGCAGATGCAGGATTTCCGTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PHGSGAGTSQWA*PPGQMQDFRHS Trigger: AGAGTGACGGAAATCCTGCATCTGCCCAGGCGGCCAAGCCCACTGCGATGTCCCAGCCCCGGAACCATGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS TCA 72 bp | CAGCCACACGCAGCATTTCCACCGTGTCGGCCCACATaGGGAAGCTTCGCAGGAACAGCTCCGCCCGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QPHAAFPPCRPT*GSFAGTAPPEH Trigger: ATGTTCGGGCGGAGCTGTTCCTGCGAAGCTTCCTCATGTGGGCCGACACGGTGGAAATGCTGCGTGTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS GCA 72 bp | CTGGGACATCGCAGTGGGCTTGGCCGCCTGGGCAGATaGAGGATTTCCGTCACTCTGAACTACCTGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGHRSGLGRLGR*RISVTLNYLFC Trigger: ACAGAACAGGTAGTTCAGAGTGACGGAAATCCTGCATCTGCCCAGGCGGCCAAGCCCACTGCGATGTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS TCA 72 bp | GATAAAACTGAATATGTAGACCGGGTACAGCCAGGCTaGCTTGTACACCGCCTGGTGCCCAGCCACACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DKTEYVDRVQPG*LVHRLVPSHTQ Trigger: CTGCGTGTGGCTGGGCACCAGGCGGTGTACAAGTCAGCCTGGCTGTACCCGGTCTACATATTCAGTTTTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS CAA 90 bp | CCACATGAGGAAGCTTCGCAGGAACAGCTCCGCCCGAACATCTCTTaGAGACATCGTCCTAAGGATCCTAGACTGAAAGGAGGGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHEEASQEQLRPNIS*RHRPKDPRLKGGLQ Trigger: CTGGAGCCCTCCTTTCAGTCTAGGATCCTTAGGACGATGTCTCAAAGAGATGTTCGGGCGGAGCTGTTCCTGCGAAGCTTCCTCATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS TCA 72 bp | TCACTACAGCCACATAGGCGATGGAACAGGAAACAATaGGCCAATAGTGAGTCCTTTCAGACTTTGTTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLQPHRRWNRKQ*ANSESFQTLFA Trigger: AGCGAACAAAGTCTGAAAGGACTCACTATTGGCTCATTGTTTCCTGTTCCATCGCCTATGTGGCTGTAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||
| CDS TCA 72 bp | TCAGGCAACGAATTAGCTGAGCCATTGATATTCTTTTaGACCTCGGTGACTGCTATGGAGAAGCTGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGNELAEPLIFF*TSVTAMEKLKL Trigger: CAGCTTCAGCTTCTCCATAGCAGTCACCGAGGTTCAAAAGAATATCAATGGCTCAGCTAATTCGTTGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077517.9 |
||