Pregenerated sensors for TMEM235 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070330Ensembl transcript IDs: ENSMUST00000093905.3
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGAACACAAACTGGAGGGCAGGGTCTCCATCAGCTCCAGTCCTTTaGCCTCAGTGGGTCCCACTAACCCTGCTCCTCAGAAGCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: LNTNWRAGSPSAPVL*PQWVPLTLLLRSSP Trigger: TGGGGAGCTTCTGAGGAGCAGGGTTAGTGGGACCCACTGAGGGCAAAGGACTGGAGCTGATGGAGACCCTGCCCTCCAGTTTGTGTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR TCA 90 bp | GGGAAAGGGAACAAAACTGAACCCATGGGTCCCGCCAAAGAGCAGTaGCACCCAGACCTGCCATCTGTTCTTGGGCCTTCTGGCCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GKGNKTEPMGPAKEQ*HPDLPSVLGPSGLS Trigger: ACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGCTCTTTGGCGGGACCCATGGGTTCAGTTTTGTTCCCTTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR GCA 90 bp | TGGCCTCAGTCTCCCACTCTGTGGCATTCGGTGAGTGGTTACTATTaGCTAGCTTGTGGGGGATGGAGAGGAAGCGGAACACTCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: WPQSPTLWHSVSGYY*LACGGWRGSGTLSR Trigger: CCTGCTGAGTGTTCCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAGTAACCACTCACCGAATGCCACAGAGTGGGAGACTGAGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 90 bp | CAAAGAGCAGTGACACCCAGACCTGCCATCTGTTCTTGGGCCTTCTaGCCTCAGTCTCCCACTCTGTGGCATTCGGTGAGTGGTTACTAT | + |
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Preference number: 1 (lower is better) Translates to: QRAVTPRPAICSWAF*PQSPTLWHSVSGYY Trigger: ATAGTAACCACTCACCGAATGCCACAGAGTGGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGCTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 90 bp | CCTGGAAGTGCTCTTACATGGAATGGCAAAGGTCTGAACACAAACTaGAGGGCAGGGTCTCCATCAGCTCCAGTCCTTTGCCCTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: PGSALTWNGKGLNTN*RAGSPSAPVLCPQW Trigger: CCACTGAGGGCAAAGGACTGGAGCTGATGGAGACCCTGCCCTCCAGTTTGTGTTCAGACCTTTGCCATTCCATGTAAGAGCACTTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CAA 90 bp | TGGGTCCCGCCAAAGAGCAGTGACACCCAGACCTGCCATCTGTTCTaGGGCCTTCTGGCCTCAGTCTCCCACTCTGTGGCATTCGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: WVPPKSSDTQTCHLF*GLLASVSHSVAFGE Trigger: CTCACCGAATGCCACAGAGTGGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGCTCTTTGGCGGGACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CAA 90 bp | TCTGAACACAAACTGGAGGGCAGGGTCTCCATCAGCTCCAGTCCTTaGCCCTCAGTGGGTCCCACTAACCCTGCTCCTCAGAAGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SEHKLEGRVSISSSP*PSVGPTNPAPQKLP Trigger: GGGGAGCTTCTGAGGAGCAGGGTTAGTGGGACCCACTGAGGGCAAAGGACTGGAGCTGATGGAGACCCTGCCCTCCAGTTTGTGTTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CAA 90 bp | GTCTCCCACTCTGTGGCATTCGGTGAGTGGTTACTATTGCCTAGCTaGTGGGGGATGGAGAGGAAGCGGAACACTCAGCAGGCACCTAGC | + |
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Preference number: 2 (lower is better) Translates to: VSHSVAFGEWLLLPS*WGMERKRNTQQAPS Trigger: GCTAGGTGCCTGCTGAGTGTTCCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAGTAACCACTCACCGAATGCCACAGAGTGGGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR CCA 90 bp | AGGACTGAGACCCAAAGGTCCACTTTGCCTGGAAGATGTGCCTCTCACCAGCCCCTATTGCCTAGCTTGTaGGGGATGGAGAGGAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: RTETQRSTLPGRCASHQPLLPSL*GMERKR Trigger: CCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAG...GGGCTGGTGAGAGGCACATCTTCCAGGCAAAGTGGACCTTTGGGTCTCAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR TCA 90 bp | AGGACTGAGACCCAAAGGTCCACTTTGCCTGGAAGATGTGCCTCTCACCAGCCCGAAAGGGAACAAAACTaGACCCATGGGTCCCGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RTETQRSTLPGRCASHQPEREQN*THGSRQ Trigger: TTGGCGGGACCCATGGGTTCAGTTTTGTTCCCTTTC...GGGCTGGTGAGAGGCACATCTTCCAGGCAAAGTGGACCTTTGGGTCTCAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAGGTTGGAGTGGGCTACATCCCCCAGAGCAAGAACACCTTCTGGACACAATGTCAAAGGTGTCTaGGGCTTCCTTCTCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LPRLEWATSPRARTPSGHNVKGV*GFLLPS Trigger: GCTGGGGAGAAGGAAGCCCCAGACACCTTTGACATT...GTGTCCAGAAGGTGTTCTTGCTCTGGGGGATGTAGCCCACTCCAACCTAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR TCA 90 bp | AAATACATAAACACAGGTCTGTCCCCTTGTATGTGGCCAGAGCTGATCCAGTTCGGACACACAGAACCCTaGGGCACCCCACCAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: KYINTGLSPCMWPELIQFGHTEP*GTPPDC Trigger: ACAGTCTGGTGGGGTGCCTCAGGGTTCTGTGTGTCC...GAACTGGATCAGCTCTGGCCACATACAAGGGGACAGACCTGTGTTTATGTATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACTGAACCCATGGGTCCCGCCAAAGAGCAGTGACACCCAGACCTGCCATCTTCTCATGTTCAAATaGAGTAGAATGGAGCACTCC | + |
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Preference number: 2 (lower is better) Translates to: TKLNPWVPPKSSDTQTCHLLMFK*SRMEHS Trigger: GGAGTGCTCCATTCTACTCCATTTGAACATGAGAAG...ATGGCAGGTCTGGGTGTCACTGCTCTTTGGCGGGACCCATGGGTTCAGTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR CCA 90 bp | AAATACATAAACACAGGTCTGTCCCCTTGTATGTGGCCAGAGCTGATCCAGTTCGTGGCATTCGGTGAGTaGTTACTATTGCCTAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: KYINTGLSPCMWPELIQFVAFGE*LLLPSL Trigger: CAAGCTAGGCAATAGTAACCACTCACCGAATGCCAC...GAACTGGATCAGCTCTGGCCACATACAAGGGGACAGACCTGTGTTTATGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR GCA 72 bp | CCATGGGTCCCGCCAAAGAGCAGTGACACCCAGACCTaGCATCTGTTCTTGGGCCTTCTGGCCTCAGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PWVPPKSSDTQT*HLFLGLLASVS Trigger: GGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGCTCTTTGGCGGGACCCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR GCA 72 bp | AACTGGAGGGCAGGGTCTCCATCAGCTCCAGTCCTTTaGCCTCAGTGGGTCCCACTAACCCTGCTCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: NWRAGSPSAPVL*PQWVPLTLLLR Trigger: TCTGAGGAGCAGGGTTAGTGGGACCCACTGAGGGCAAAGGACTGGAGCTGATGGAGACCCTGCCCTCCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | TCCTCTAGCCAGACAACCCAGGGGGCTGGCCAGGCATaGCTCCAATTCACTGTTAATGGGGCCAGCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: SSSQTTQGAGQA*LQFTVNGASLR Trigger: TCTGAGGCTGGCCCCATTAACAGTGAATTGGAGCCATGCCTGGCCAGCCCCCTGGGTTGTCTGGCTAGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGCTGATCCAGTTCTCATCTGTGCTGTCCCAGGCAGGGAGAGGGCTGCAGCCCACCAACTTCCCCTaGGGAAAGGGAACAAAACTG | + |
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Preference number: 3 (lower is better) Translates to: PELIQFSSVLSQAGRGLQPTNFP*GKGTKL Trigger: CAGTTTTGTTCCCTTTCCCAAGGGGAAGTTGGTGGG...CTGCAGCCCTCTCCCTGCCTGGGACAGCACAGATGAGAACTGGATCAGCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR-3UTR CAA 90 bp | GCCTGTGAGCTGACCCATCCACATCTGCAGCCAAGTCTCCAGGCCAGGCTTCTGACCCAAAGGTCCACTTaGCCTGGAAGATGTGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: ACELTHPHLQPSLQARLLTQRST*PGRCAS Trigger: AGAGGCACATCTTCCAGGCAAAGTGGACCTTTGGGT...CAGAAGCCTGGCCTGGAGACTTGGCTGCAGATGTGGATGGGTCAGCTCACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR GCA 72 bp | ATCCACATCTGCAGCCAAGTCTCCAGGCCAGGCTTCTaGGTCCCTCTGAGGAGTTCCTCTAGCCAGACAACC | + |
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Preference number: 3 (lower is better) Translates to: IHICSQVSRPGF*VPLRSSSSQTT Trigger: GGTTGTCTGGCTAGAGGAACTCCTCAGAGGGACGCAGAAGCCTGGCCTGGAGACTTGGCTGCAGATGTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | CCTAGCACAGGGGAGGACTGTCTCAGCTCCCTAGGTTaGAGTGGGCTACATCCCCCAGAGCAAGAACACCTT | + |
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Preference number: 3 (lower is better) Translates to: PSTGEDCLSSLG*SGLHPPEQEHL Trigger: AAGGTGTTCTTGCTCTGGGGGATGTAGCCCACTCCAACCTAGGGAGCTGAGACAGTCCTCCCCTGTGCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | CAAAGAGCAGTGACACCCAGACCTGCCATCTGTTCTTaGGCCTTCTGGCCTCAGTCTCCCACTCTGTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: QRAVTPRPAICS*AFWPQSPTLWH Trigger: ATGCCACAGAGTGGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGCTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR TCA 72 bp | CCCAGAGCAAGAACACCTTCTGGACACACAGAACCCTaGGGCACCCCACCAGACTGTCCCAAAAAGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: PRARTPSGHTEP*GTPPDCPKKSS Trigger: TGAGCTCTTTTTGGGACAGTCTGGTGGGGTGCCTCAGGGTTCTGTGTGTCCAGAAGGTGTTCTTGCTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR GCA 72 bp | GTTAATGGGGCCAGCCTCAGACATTCCCCTGGTTGCTaGTATAAAGAGGAAGTTCCAGGCCAGCATGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: VNGASLRHSPGC*YKEEVPGQHGQ Trigger: CTGCCCATGCTGGCCTGGAACTTCCTCTTTATAGCAGCAACCAGGGGAATGTCTGAGGCTGGCCCCATTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | TTCCCAGCCAGGATTCCGACAAATGTCAAAGGTGTCTaGGGCTTCCTTCTCCCCAGCACCCTGTTACACTGG | + |
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Preference number: 3 (lower is better) Translates to: FPARIPTNVKGV*GFLLPSTLLHW Trigger: CCAGTGTAACAGGGTGCTGGGGAGAAGGAAGCCCCAGACACCTTTGACATTTGTCGGAATCCTGGCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | TCGGTGAGTGGTTACTATTGCCTAGCTTGTGGGGGATaGAGAGGAAGCGGAACACTCAGCAGGCACCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: SVSGYYCLACGG*RGSGTLSRHLA Trigger: TGCTAGGTGCCTGCTGAGTGTTCCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAGTAACCACTCACCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | GTGGCATTCGGTGAGTGGTTACTATTGCCTAGCTTGTaGGGGATGGAGAGGAAGCGGAACACTCAGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: VAFGEWLLLPSL*GMERKRNTQQA Trigger: TGCCTGCTGAGTGTTCCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAGTAACCACTCACCGAATGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | AACTTCCCCTTGGGAAAGGGAACAAAACTGAACCCATaGGTCCCGCCAAAGAGCAGTGACACCCAGACCTGC | + |
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Preference number: 3 (lower is better) Translates to: NFPLGKGTKLNP*VPPKSSDTQTC Trigger: GCAGGTCTGGGTGTCACTGCTCTTTGGCGGGACCCATGGGTTCAGTTTTGTTCCCTTTCCCAAGGGGAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR TCA 72 bp | AACAAAACTGAACCCATGGGTCCCGCCAAAGAGCAGTaGCACCCAGACCTGCCATCTGTTCTTGGGCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: NKTEPMGPAKEQ*HPDLPSVLGPS Trigger: AGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGCTCTTTGGCGGGACCCATGGGTTCAGTTTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR GCA 72 bp | TCTCCCACTCTGTGGCATTCGGTGAGTGGTTACTATTaGCTAGCTTGTGGGGGATGGAGAGGAAGCGGAACA | + |
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Preference number: 3 (lower is better) Translates to: SPTLWHSVSGYY*LACGGWRGSGT Trigger: TGTTCCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAGTAACCACTCACCGAATGCCACAGAGTGGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR GCA 72 bp | ACTGTTAATGGGGCCAGCCTCAGACATTCCCCTGGTTaGTGCTATAAAGAGGAAGTTCCAGGCCAGCATGGG | + |
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Preference number: 3 (lower is better) Translates to: TVNGASLRHSPG*CYKEEVPGQHG Trigger: CCCATGCTGGCCTGGAACTTCCTCTTTATAGCAGCAACCAGGGGAATGTCTGAGGCTGGCCCCATTAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | TCCAAATACATAAACACAGGTCTGTCCCCTTGTATGTaGCCAGAGCTGATCCAGTTCTCATCTGTGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: SKYINTGLSPCM*PELIQFSSVLS Trigger: GGACAGCACAGATGAGAACTGGATCAGCTCTGGCCACATACAAGGGGACAGACCTGTGTTTATGTATTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CCA 72 bp | ATTTATTCAGACACCTGGAAGTGCTCTTACATGGAATaGCAAAGGTCTGAACACAAACTGGAGGGCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: IYSDTWKCSYME*QRSEHKLEGRV Trigger: GACCCTGCCCTCCAGTTTGTGTTCAGACCTTTGCCATTCCATGTAAGAGCACTTCCAGGTGTCTGAATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR TCA 90 bp | GCAGTGACACCCAGACCTGCCATCTGTTCTTGGGCCTTCTGGCCTCAGTCTCCCGGCGCTGGCTCAGGCTaGGGAGCCGGGCAGCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: AVTPRPAICSWAFWPQSPGAGSG*GAGQLR Trigger: TCGCAGCTGCCCGGCTCCTCAGCCTGAGCCAGCGCC...GGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR GCA 90 bp | GCAGTGACACCCAGACCTGCCATCTGTTCTTGGGCCTTCTGGCCTCAGTCTCCCGAGGAGCCGGGCAGCTaGGAGCAGGAGGGCCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: AVTPRPAICSWAFWPQSPEEPGS*EQEGPA Trigger: AGCGGGGCCCTCCTGCTCGCAGCTGCCCGGCTCCTC...GGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR TCA 90 bp | CCAGGATTCCGACAAATGTCAAAGGTGTCTGGGGCTTCCTTCTCCCCAGCACCCGCAGGAGGGCCCCGCTaGGCACCTCCGAGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGFRQMSKVSGASFSPAPAGGPR*APPRRR Trigger: CCTGCGCCTCGGAGGTGCTCAGCGGGGCCCTCCTGC...GGGTGCTGGGGAGAAGGAAGCCCCAGACACCTTTGACATTTGTCGGAATCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR CCA 90 bp | GGATGGAGAGGAAGCGGAACACTCAGCAGGCACCTAGCACAGGGGAGGACTGTCGGCACTCCTGGGCGCTaGCTCAGGCTGAGGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GWRGSGTLSRHLAQGRTVGTPGR*LRLRSR Trigger: CCGGCTCCTCAGCCTGAGCCAGCGCCCAGGAGTGCC...GACAGTCCTCCCCTGTGCTAGGTGCCTGCTGAGTGTTCCGCTTCCTCTCCATCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR TCA 90 bp | CCAGGATTCCGACAAATGTCAAAGGTGTCTGGGGCTTCCTTCTCCCCAGCACCCCCAGCAGCGCGAAGCTaGGTAAGGCGCCCAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PGFRQMSKVSGASFSPAPPAARS*VRRPGL Trigger: CAGCCCTGGGCGCCTTACTCAGCTTCGCGCTGCTGG...GGGTGCTGGGGAGAAGGAAGCCCCAGACACCTTTGACATTTGTCGGAATCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR GCA 90 bp | CCCAGACCTGCCATCTGTTCTTGGGCCTTCTGGCCTCAGTCTCCCACTCTGTGGCGCCAGAGCCCGGAATaGGAGAAGAGCTGCACGCCA | + |
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Preference number: 4 (lower is better) Translates to: PRPAICSWAFWPQSPTLWRQSPE*EKSCTP Trigger: TGGCGTGCAGCTCTTCTCGCATTCCGGGCTCTGGCG...CCACAGAGTGGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR GCA 90 bp | ACCTTCTGGACACACAGAACCCTGAGGCACCCCACCAGACTGTCCCAAAAAGAGGCTGGCGACAGCCGCTaGCAGCAGCGCGAAGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TFWTHRTLRHPTRLSQKEAGDSR*QQREAE Trigger: CTCAGCTTCGCGCTGCTGGCAGCGGCTGTCGCCAGC...CTCTTTTTGGGACAGTCTGGTGGGGTGCCTCAGGGTTCTGTGTGTCCAGAAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR GCA 90 bp | CCTTGTATGTGGCCAGAGCTGATCCAGTTCTCATCTGTGCTGTCCCAGGCAGGGGTAGATGCTGAGCCCTaGCAGGGTCAGGGCACCCCC | + |
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Preference number: 4 (lower is better) Translates to: PCMWPELIQFSSVLSQAGVDAEP*QGQGTP Trigger: GGGGGTGCCCTGACCCTGGCAGGGCTCAGCATCTAC...CCCTGCCTGGGACAGCACAGATGAGAACTGGATCAGCTCTGGCCACATACAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR CCA 90 bp | CCCAGACCTGCCATCTGTTCTTGGGCCTTCTGGCCTCAGTCTCCCACTCTGTGGAGAAGTAGCAGCCAGTaGCCAGCAGCAGAGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: PRPAICSWAFWPQSPTLWRSSSQ*PAAEGH Trigger: GTGTCCCTCTGCTGCTGGCCACTGGCTGCTACTTCT...CCACAGAGTGGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR CCA 90 bp | CAGAGCAAGAACACCTTCTGGACACACAGAACCCTGAGGCACCCCACCAGACTGTGTACCAGTAGTCGCTaGCGACAGCCGCTGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QSKNTFWTHRTLRHPTRLCTSSR*RQPLPA Trigger: TGCTGGCAGCGGCTGTCGCCAGCGACTACTGGTACA...CAGTCTGGTGGGGTGCCTCAGGGTTCTGTGTGTCCAGAAGGTGTTCTTGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR CCA 90 bp | GCAGTGACACCCAGACCTGCCATCTGTTCTTGGGCCTTCTGGCCTCAGTCTCCCAGCAGAGGGACACTCTaGGATAGGGAGCTGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: AVTPRPAICSWAFWPQSPSRGTL*DRELSK Trigger: CTTGCTCAGCTCCCTATCCCAGAGTGTCCCTCTGCT...GGGAGACTGAGGCCAGAAGGCCCAAGAACAGATGGCAGGTCTGGGTGTCACTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGGACACACAGAACCCTGAGGCACCCCACCAGACTGTCCCAAAAAGAGCTACCATGACTGTGCGATaGAGGGAGAGCAGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LLDTQNPEAPHQTVPKRATMTVR*RESRCC Trigger: ACAGCACCTGCTCTCCCTGCATCGCACAGTCATGGT...AGCTCTTTTTGGGACAGTCTGGTGGGGTGCCTCAGGGTTCTGTGTGTCCAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CAA 72 bp | GTCTCCCACTCTGTGGCATTCGGTGAGTGGTTACTATaGCCTAGCTTGTGGGGGATGGAGAGGAAGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VSHSVAFGEWLL*PSLWGMERKRN Trigger: GTTCCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAGTAACCACTCACCGAATGCCACAGAGTGGGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CAA 72 bp | TCTGTGGCATTCGGTGAGTGGTTACTATTGCCTAGCTaGTGGGGGATGGAGAGGAAGCGGAACACTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVAFGEWLLLPS*WGMERKRNTQQ Trigger: CTGCTGAGTGTTCCGCTTCCTCTCCATCCCCCACAAGCTAGGCAATAGTAACCACTCACCGAATGCCACAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS-3UTR TCA 90 bp | ACAAAACTGAACCCATGGGTCCCGCCAAAGAGCAGTGACACCCAGACCTGCCATCACGAATGCCAGGTGTaGGTAGCTGATGTAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: TKLNPWVPPKSSDTQTCHHECQV*VADVDA Trigger: AGCATCTACATCAGCTACTCACACCTGGCATTCGTG...ATGGCAGGTCTGGGTGTCACTGCTCTTTGGCGGGACCCATGGGTTCAGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CAA 72 bp | GAAGCTCCCCAGATCCTTAGAAGCAATCTAAGTAGCTaGGGGACACTGCTGGGACCAAACCTTGAGAGATAC | + |
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Preference number: 4 (lower is better) Translates to: EAPQILRSNLSS*GTLLGPNLERY Trigger: GTATCTCTCAAGGTTTGGTCCCAGCAGTGTCCCCAAGCTACTTAGATTGCTTCTAAGGATCTGGGGAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| 3UTR CAA 72 bp | CCTATTGTCCAAATACATAAACACAGGTCTGTCCCCTaGTATGTGGCCAGAGCTGATCCAGTTCTCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: PIVQIHKHRSVP*YVARADPVLIC Trigger: ACAGATGAGAACTGGATCAGCTCTGGCCACATACAAGGGGACAGACCTGTGTTTATGTATTTGGACAATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 90 bp | GGCACGCAGCTGTTCTGCCCTTCACAGGTGCGCCAGAGCCCGGAATaGGAGAAGAGCTGCACGCCACCGAGGCCGCCAGCGTCCGCCACC | + |
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Preference number: 5 (lower is better) Translates to: GTQLFCPSQVRQSPE*EKSCTPPRPPASAT Trigger: GGTGGCGGACGCTGGCGGCCTCGGTGGCGTGCAGCTCTTCTCGCATTCCGGGCTCTGGCGCACCTGTGAAGGGCAGAACAGCTGCGTGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 90 bp | TTCTGCCCTTCACAGGTGCGCCAGAGCCCGGAATGCGAGAAGAGCTaGACGCCACCGAGGCCGCCAGCGTCCGCCACCTCCAGGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: FCPSQVRQSPECEKS*TPPRPPASATSRMY Trigger: GTACATCCTGGAGGTGGCGGACGCTGGCGGCCTCGGTGGCGTGCAGCTCTTCTCGCATTCCGGGCTCTGGCGCACCTGTGAAGGGCAGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS TCA 90 bp | GTGCGTCACGCCGTACGTGCGGGCCGCCTCCACGAATGCCAGGTGTaGGTAGCTGATGTAGATGCTGAGCCCTGCCAGGGTCAGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: VRHAVRAGRLHECQV*VADVDAEPCQGQGT Trigger: GGTGCCCTGACCCTGGCAGGGCTCAGCATCTACATCAGCTACTCACACCTGGCATTCGTGGAGGCGGCCCGCACGTACGGCGTGACGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 90 bp | AGGCCGGCACTGGCAAATGGGTCAATCAGGGGCACGCAGCTGTTCTaGCCTTCACAGGTGCGCCAGAGCCCGGAATGCGAGAAGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RPALANGSIRGTQLF*PSQVRQSPECEKSC Trigger: GCAGCTCTTCTCGCATTCCGGGCTCTGGCGCACCTGTGAAGGGCAGAACAGCTGCGTGCCCCTGATTGACCCATTTGCCAGTGCCGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 72 bp | TCACAGGTGCGCCAGAGCCCGGAATGCGAGAAGAGCTaGACGCCACCGAGGCCGCCAGCGTCCGCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SQVRQSPECEKS*TPPRPPASATS Trigger: GGAGGTGGCGGACGCTGGCGGCCTCGGTGGCGTGCAGCTCTTCTCGCATTCCGGGCTCTGGCGCACCTGTGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS TCA 72 bp | GCCGTACGTGCGGGCCGCCTCCACGAATGCCAGGTGTaGGTAGCTGATGTAGATGCTGAGCCCTGCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: AVRAGRLHECQV*VADVDAEPCQG Trigger: ACCCTGGCAGGGCTCAGCATCTACATCAGCTACTCACACCTGGCATTCGTGGAGGCGGCCCGCACGTACGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 72 bp | CAATCAGGGGCACGCAGCTGTTCTGCCCTTCACAGGTaGGCCAGAGCCCGGAATGCGAGAAGAGCTGCACGC | + |
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Preference number: 6 (lower is better) Translates to: QSGARSCSALHR*ARARNARRAAR Trigger: GCGTGCAGCTCTTCTCGCATTCCGGGCTCTGGCGCACCTGTGAAGGGCAGAACAGCTGCGTGCCCCTGATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 72 bp | AGTGACCAGCCGAAGCTGATGTGCACGTTCTGCACGTaGGTCACGCCGTACGTGCGGGCCGCCTCCACGAAT | + |
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Preference number: 6 (lower is better) Translates to: SDQPKLMCTFCT*VTPYVRAASTN Trigger: ATTCGTGGAGGCGGCCCGCACGTACGGCGTGACGCACGTGCAGAACGTGCACATCAGCTTCGGCTGGTCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS CCA 72 bp | GGGTCAGGGCACCCCCTAGCAAGAAGTAGCAGCCAGTaGCCAGCAGCAGAGGGACACTCTGGGATAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GSGHPLARSSSQ*PAAEGHSGIGS Trigger: GCTCCCTATCCCAGAGTGTCCCTCTGCTGCTGGCCACTGGCTGCTACTTCTTGCTAGGGGGTGCCCTGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 72 bp | CTGGCAAATGGGTCAATCAGGGGCACGCAGCTGTTCTaGCCTTCACAGGTGCGCCAGAGCCCGGAATGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LANGSIRGTQLF*PSQVRQSPECE Trigger: CTCGCATTCCGGGCTCTGGCGCACCTGTGAAGGGCAGAACAGCTGCGTGCCCCTGATTGACCCATTTGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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| CDS GCA 72 bp | ACGAGGCTCAGAGGCAAGACTACCATGACTGTGCGATaGAGGGAGAGCAGGTGCTGTACGGAGGGAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: TRLRGKTTMTVR*RESRCCTEGET Trigger: AGTTTCTCCCTCCGTACAGCACCTGCTCTCCCTGCATCGCACAGTCATGGTAGTCTTGCCTCTGAGCCTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093905.3 |
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