Pregenerated sensors for TMEM234 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028797Ensembl transcript IDs: ENSMUST00000102591.10, ENSMUST00000127919.2, ENSMUST00000129515.8, ENSMUST00000135628.8, ENSMUST00000137090.8, ENSMUST00000145345.2, ENSMUST00000150110.8, ENSMUST00000151969.8, ENSMUST00000152126.8, ENSMUST00000172774.8, ENSMUST00000173758.8, ENSMUST00000173937.8, ENSMUST00000174073.8, ENSMUST00000174610.2, ENSMUST00000174819.8, ENSMUST00000181579.8
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTaGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACC | + |
Preference number: 1 (lower is better) Translates to: LGPASTEHSRADGRG*PTQECDGWPWVLLT Trigger: GGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR GCA 90 bp | ACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTaGGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCAC | + |
Preference number: 1 (lower is better) Translates to: TEHSRADGRGWPTQE*DGWPWVLLTELVMH Trigger: GTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CCA 90 bp | GCTGACGGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTTGTGATGCACACGGTGATCCCTGTG | + |
Preference number: 1 (lower is better) Translates to: ADGRGWPTQECDGWP*VLLTELVMHTVIPV Trigger: CACAGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CCA 90 bp | AGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTaGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCACACGGTGATC | + |
Preference number: 1 (lower is better) Translates to: SRADGRGWPTQECDG*PWVLLTELVMHTVI Trigger: GATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CCA 90 bp | CAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTaGATCCCCAAGCCCGTATTTCTCCCAGAGGTACGACACTTTCCC | + |
Preference number: 1 (lower is better) Translates to: QEIEGDLSTLQWTGG*IPKPVFLPEVRHFP Trigger: GGGAAAGTGTCGTACCTCTGGGAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 90 bp | GAAAGGTGTCTACATTGCAGGTCGGGATGGAATTGCGAGTGCACCTaGGGTGAGGGGCTGGACCTTCCGGCGAAATGCTGTCACATAACA | + |
Preference number: 1 (lower is better) Translates to: ERCLHCRSGWNCECT*GEGLDLPAKCCHIT Trigger: TGTTATGTGACAGCATTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAGACACCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 90 bp | GCGGATCACAGTCGCTCTGGCTGCCGCTTCCATCAGGTCTCTTACTaGGTCACACTGCTGCTTTCCCACCAATATCTTCTCCAAGGACCT | + |
Preference number: 1 (lower is better) Translates to: ADHSRSGCRFHQVSY*VTLLLSHQYLLQGP Trigger: AGGTCCTTGGAGAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGTAAGAGACCTGATGGAAGCGGCAGCCAGAGCGACTGTGATCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174073.8 |
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3UTR TCA 90 bp | AAATGCTGTCACATAACATCTTACTCGCACGCCCCCGCACTGCACTaGAGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGGGT | + |
Preference number: 1 (lower is better) Translates to: KCCHITSYSHAPALH*RMRSSGRVREENEG Trigger: ACCCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCTTCAGTGCAGTGCGGGGGCGTGCGAGTAAGATGTTATGTGACAGCATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 90 bp | GATTTATTGAAAGCTGCTGCTGGCCAGATGTTTGCTGCAGCTAGGTaGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAG | + |
Preference number: 1 (lower is better) Translates to: DLLKAAAGQMFAAAR*CPAHSCLLAGLTVE Trigger: CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGCAGCAAACATCTGGCCAGCAGCAGCTTTCAATAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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3UTR CCA 90 bp | GAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTaGACTGGGGGCTGGATCCCCAAGCCCGTATTTCTCCCAGAGGTA | + |
Preference number: 1 (lower is better) Translates to: EAIVQEIEGDLSTLQ*TGGWIPKPVFLPEV Trigger: TACCTCTGGGAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR GCA 90 bp | GTCGCTCTGGCTGCCGCTTCCATCAGGTCTCTTACTGGGTCACACTaGTGCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAAT | + |
Preference number: 1 (lower is better) Translates to: VALAAASIRSLTGSH*CFPTNIFSKDLPNN Trigger: ATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGTAAGAGACCTGATGGAAGCGGCAGCCAGAGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174073.8 |
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3UTR CCA 90 bp | ATTGAGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTaGCTTGCACCTTCCCACGGGGGTTGGCATGGTTACAAATGCTCA | + |
Preference number: 1 (lower is better) Translates to: IEEKGHQVPVRESLF*LAPSHGGWHGYKCS Trigger: TGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000150110.8 ENSMUST00000172774.8 |
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3UTR CCA 90 bp | GCTTTTCCACTTGTTCTCTACATTAGGCCGGCTTCCGAGGCTTCTTaGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAA | + |
Preference number: 1 (lower is better) Translates to: AFPLVLYIRPASEAS*SDVNSRAFEPSMRQ Trigger: TTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGACGTCGGACCAAGAAGCCTCGGAAGCCGGCCTAATGTAGAGAACAAGTGGAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 90 bp | TCCAAAGTGTCACAGTCCTTGACTGACACAGACAGAAGCTACACTTaGCAGAGAATGCTGAGCCTGAGGACCAGCCAGCTGCGTAGGTGT | + |
Preference number: 1 (lower is better) Translates to: SKVSQSLTDTDRSYT*QRMLSLRTSQLRRC Trigger: ACACCTACGCAGCTGGCTGGTCCTCAGGCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGACACTTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 90 bp | CCTGGTGTGGTGGTCCTGAACACACACACACACACCTGTACAGTGTaGGAAGACGTGGATACACAGGTCCAAAGTGTCACAGTCCTTGAC | + |
Preference number: 1 (lower is better) Translates to: PGVVVLNTHTHTCTV*EDVDTQVQSVTVLD Trigger: GTCAAGGACTGTGACACTTTGGACCTGTGTATCCACGTCTTCCCACACTGTACAGGTGTGTGTGTGTGTGTTCAGGACCACCACACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 90 bp | ATGGAGTATACCACCATGCCTGGCTCCAGTGCTAAATCTCAACCGTaGAACCCACTAAAGGTTACAAAACCTTCCCAGTGCTGCCCTTCG | + |
Preference number: 1 (lower is better) Translates to: MEYTTMPGSSAKSQP*NPLKVTKPSQCCPS Trigger: CGAAGGGCAGCACTGGGAAGGTTTTGTAACCTTTAGTGGGTTCCACGGTTGAGATTTAGCACTGGAGCCAGGCATGGTGGTATACTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000152126.8 |
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3UTR TCA 90 bp | CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTAATAGGCAGCCATGGGCAGTTCTC | + |
Preference number: 1 (lower is better) Translates to: LLMPKSSSREGIHSD*GERASGNRQPWAVL Trigger: GAGAACTGCCCATGGCTGCCTATTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135628.8 ENSMUST00000145345.2 |
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3UTR TCA 90 bp | CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTG | + |
Preference number: 1 (lower is better) Translates to: LLMPKSSSREGIHSD*GERASGTSSRVPVL Trigger: CAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000150110.8 ENSMUST00000172774.8 |
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3UTR TCA 90 bp | ATGGAGAGTATGTTTCTTATTGTGGCCCCTGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGCTGGCCAATCATTCTGCCTACACCT | + |
Preference number: 1 (lower is better) Translates to: MESMFLIVAPEIDMI*EMREASWPIILPTP Trigger: AGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTCAGGGGCCACAATAAGAAACATACTCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR TCA 90 bp | AAATGCTCAGGGACCGCTCATGTGTTTGAAGACCCAGAGGATAAATaGCTCTTCCAGGAACTTCTAGTGAGTAAGAGATGGGCTGGGAAT | + |
Preference number: 1 (lower is better) Translates to: KCSGTAHVFEDPEDK*LFQELLVSKRWAGN Trigger: ATTCCCAGCCCATCTCTTACTCACTAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCCCTGAGCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172774.8 |
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3UTR TCA 90 bp | CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTAAGAGGATAAATGACTCTTCCAGG | + |
Preference number: 1 (lower is better) Translates to: LLMPKSSSREGIHSD*GERASGKRINDSSR Trigger: CCTGGAAGAGTCATTTATCCTCTTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137090.8 ENSMUST00000152126.8 |
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3UTR CAA 90 bp | GGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTaGCTCACCGAGCTTGTGATGCACACGGTGATCCCTGTGATGGTG | + |
Preference number: 2 (lower is better) Translates to: GRGWPTQECDGWPWV*LTELVMHTVIPVMV Trigger: CACCATCACAGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR TCA 90 bp | GGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC | + |
Preference number: 2 (lower is better) Translates to: GPASTEHSRADGRGWPTQEIDMI*EMREAS Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...CTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR TCA 90 bp | CCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC | + |
Preference number: 2 (lower is better) Translates to: PTPWAQHPPSTAELTVGVEIDMI*EMREAS Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...AACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR GCA 90 bp | CAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTCACTCAGGAGTCAGATaGAGGCTGATCTCTGAATTC | + |
Preference number: 2 (lower is better) Translates to: QHPPSTAELTVGVGPLRSHSGVR*RLISEF Trigger: GAATTCAGAGATCAGCCTGCATCTGACTCCTGAGTG...ACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 |
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3UTR-3UTR CCA 90 bp | AGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGGGTCAGCATCTTCTCCACTCTTCAGTGGACTaGGGGCTGGATCCCCAAGCC | + |
Preference number: 2 (lower is better) Translates to: RMRSSGRVREENEGQHLLHSSVD*GLDPQA Trigger: GGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTG...GAGAAGATGCTGACCCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR-3UTR TCA 90 bp | AGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGT | + |
Preference number: 2 (lower is better) Translates to: SWPIILPTPWAQHPPSTAGIHSD*GERASG Trigger: ACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCC...TGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 |
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3UTR CAA 90 bp | AGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTGGCTaGCACCTTCCCACGGGGGTTGGCATGGTTACAAATGCTCAGGGA | + |
Preference number: 2 (lower is better) Translates to: RRKGIRYQFESPCSG*HLPTGVGMVTNAQG Trigger: TCCCTGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000150110.8 ENSMUST00000172774.8 |
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3UTR-3UTR GCA 90 bp | AGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCATGGAGTATACCACCATaGCTGGCTCCAGTGCTAAAT | + |
Preference number: 2 (lower is better) Translates to: RPAGQSFCLHLGPSIHRAWSIPP*LAPVLN Trigger: ATTTAGCACTGGAGCCAGGCATGGTGGTATACTCCA...TGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000152126.8 |
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3UTR-3UTR TCA 90 bp | TCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: SAYTLGPASTEHSRADGRKPEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...CCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129515.8 ENSMUST00000151969.8 |
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3UTR-3UTR TCA 90 bp | CACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCAGACCCAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: HSGVRRLALGLAHRACDADPEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGGTC...TGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172774.8 |
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3UTR-3UTR GCA 90 bp | CCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGAAACCTTCCCAGTGCTaGCCTTCGTCTTGTTTGTTT | + |
Preference number: 2 (lower is better) Translates to: PAGQSFCLHLGPSIHRAQKPSQC*PSSCLF Trigger: AAACAAACAAGACGAAGGGCAGCACTGGGAAGGTTT...CTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000152126.8 |
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3UTR-3UTR CCA 90 bp | CCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG | + |
Preference number: 2 (lower is better) Translates to: PTPWAQHPPSTAELTVGVVALAL*RVCFLL Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...AACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CAA 90 bp | AATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATaGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTGGATCC | + |
Preference number: 2 (lower is better) Translates to: NSRAFEPSMRQLYKR*RVTSALFSGLGAGS Trigger: GGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR-3UTR CCA 90 bp | AGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGGGTCAGCATCTTCTCCCAGAGAGTTGCAGATaGGCACAGCTAACGTCAGAT | + |
Preference number: 2 (lower is better) Translates to: RMRSSGRVREENEGQHLLPESCR*AQLTSD Trigger: ATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGG...GAGAAGATGCTGACCCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CAA 90 bp | TGGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATaGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTG | + |
Preference number: 2 (lower is better) Translates to: WSDVNSRAFEPSMRQ*YKRLRVTSALFSGL Trigger: CAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGACGTCGGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR-3UTR TCA 90 bp | GAGCCTGGCAGTGGTGGCGCCTTTAATCCCAGCACTCAGGAGTCAGATGCAGGCAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: EPGSGGAFNPSTQESDAGKPEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...GCCTGCATCTGACTCCTGAGTGCTGGGATTAAAGGCGCCACCACTGCCAGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000151969.8 ENSMUST00000174610.2 |
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3UTR-3UTR TCA 90 bp | GTGATCCCTGTGATGGTGAGCACCATGCCAGCCACTGCTTCTTTCCCACCAATAAGAAGGGATCCACTCTaGTTGAGGAGAAAGGGCATC | + |
Preference number: 2 (lower is better) Translates to: VIPVMVSTMPATASFPPIRRDPL*LRRKGI Trigger: GATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCT...TATTGGTGGGAAAGAAGCAGTGGCTGGCATGGTGCTCACCATCACAGGGATCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 |
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3UTR-3UTR CCA 90 bp | CCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG | + |
Preference number: 2 (lower is better) Translates to: PAGQSFCLHLGPSIHRAQVALAL*RVCFLL Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...CTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR CCA 90 bp | GAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGTGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTT | + |
Preference number: 2 (lower is better) Translates to: EAGFLCSLGTMESMFLIVCDGWP*VLLTEL Trigger: AAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCA...CACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CAA 90 bp | CAGTGTGGGAAGACGTGGATACACAGGTCCAAAGTGTCACAGTCCTaGACTGACACAGACAGAAGCTACACTTGGCAGAGAATGCTGAGC | + |
Preference number: 2 (lower is better) Translates to: QCGKTWIHRSKVSQS*TDTDRSYTWQRMLS Trigger: GCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGACACTTTGGACCTGTGTATCCACGTCTTCCCACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR-3UTR TCA 90 bp | AGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCAGAAGGGATCCACTCTaGTTGAGGAGAAAGGGCATC | + |
Preference number: 2 (lower is better) Translates to: RTFPTISVKTMARELQMGRRDPL*LRRKGI Trigger: GATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCT...GCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 |
||
3UTR-3UTR GCA 90 bp | TTGGTGATGATGACCTTAAGAGTAGTCCTGGAGCCTGGCAGTGGTGGCGCCTTTCACTCAGGAGTCAGATaGAGGCTGATCTCTGAATTC | + |
Preference number: 2 (lower is better) Translates to: LVMMTLRVVLEPGSGGAFHSGVR*RLISEF Trigger: GAATTCAGAGATCAGCCTGCATCTGACTCCTGAGTG...AAAGGCGCCACCACTGCCAGGCTCCAGGACTACTCTTAAGGTCATCATCACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135628.8 ENSMUST00000145345.2 ENSMUST00000174610.2 |
||
3UTR CAA 90 bp | CCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAAGTC | + |
Preference number: 2 (lower is better) Translates to: PRTFPTISVKTMARE*QMGTANVRSVDAKV Trigger: GACTTTGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 |
||
3UTR-3UTR TCA 90 bp | GATAGACATGATCTGAGAGATGAGAGAGGCCAGCTGGCCAATCATTCTGCCTACGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC | + |
Preference number: 2 (lower is better) Translates to: DRHDLRDERGQLANHSAYEIDMI*EMREAS Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...GTAGGCAGAATGATTGGCCAGCTGGCCTCTCTCATCTCTCAGATCATGTCTATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR GCA 90 bp | TGTAACTTCTGTCCCCAAATCCCACCTTCAGCCAGCCAAAGCACTGTAATGGAGCACCATGCCAGCCACTaGTTCTTTCCCACCAATATC | + |
Preference number: 2 (lower is better) Translates to: CNFCPQIPPSASQSTVMEHHASH*FFPTNI Trigger: GATATTGGTGGGAAAGAAGCAGTGGCTGGCATGGTG...CTCCATTACAGTGCTTTGGCTGGCTGAAGGTGGGATTTGGGGACAGAAGTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152126.8 |
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3UTR-3UTR GCA 90 bp | CTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCACAGCACTGGGTCACACTGCTaGTTTCCCACCAATATCTTC | + |
Preference number: 2 (lower is better) Translates to: LPNNQCKDDGQRVADGHSTGSHC*FPTNIF Trigger: GAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGT...GCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174073.8 |
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3UTR CAA 90 bp | GCCAGCTTAGCTCCCTCCAGCTCCAGTTCCCCTGATGCTTGTTTTTaGAAGCCCGAATTGAGAACTGAATCTTTCCTTAGGCACATCTCA | + |
Preference number: 2 (lower is better) Translates to: ASLAPSSSSSPDACF*KPELRTESFLRHIS Trigger: TGAGATGTGCCTAAGGAAAGATTCAGTTCTCAATTCGGGCTTCAAAAAACAAGCATCAGGGGAACTGGAGCTGGAGGGAGCTAAGCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174073.8 |
||
3UTR-3UTR TCA 90 bp | CCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC | + |
Preference number: 2 (lower is better) Translates to: PPISSPRTFPTISVKTMAEIDMI*EMREAS Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...GGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR TCA 90 bp | GATGCACACGGTGATCCCTGTGATGGTGAGCACCATGCCAGCCACTGCTTCTTTAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: DAHGDPCDGEHHASHCFFKPEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...AAAGAAGCAGTGGCTGGCATGGTGCTCACCATCACAGGGATCACCGTGTGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129515.8 ENSMUST00000151969.8 |
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3UTR-3UTR GCA 90 bp | TTGAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTCACAGAGATCCACCTaGCTCTGCCTCCTGAGTGAT | + |
Preference number: 2 (lower is better) Translates to: LRQGFCVALALWRVCFLLSQRST*LCLLSD Trigger: ATCACTCAGGAGGCAGAGGCAGGTGGATCTCTGTGA...CAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000152126.8 |
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3UTR-3UTR TCA 90 bp | AGACGATGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: RRWPESCRWAQLTSDLLMKPEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...CATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000151969.8 |
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3UTR-3UTR CCA 90 bp | CATGCCAGCCACTGCTTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG | + |
Preference number: 2 (lower is better) Translates to: HASHCFFPTNIFSKDLPNVALAL*RVCFLL Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...GTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAAGCAGTGGCTGGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR CCA 90 bp | TGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAAGGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG | + |
Preference number: 2 (lower is better) Translates to: WPESCRWAQLTSDLLMPKVALAL*RVCFLL Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...CTTTGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 |
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3UTR-3UTR CCA 90 bp | ACCATGCCAGCCACTGCTTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG | + |
Preference number: 2 (lower is better) Translates to: TMPATASFPPISSPRTFPVALAL*RVCFLL Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...TGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAAGCAGTGGCTGGCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR TCA 90 bp | GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATCTCACAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: ASEFRVARDTQRNLEFLYLTEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGTGAG...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127919.2 |
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3UTR-3UTR TCA 90 bp | CACTGCTTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTCAGATAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: HCFFPTNIFSKDLPNNQCQIEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTATCTG...ACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAAGCAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173937.8 |
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3UTR-3UTR TCA 90 bp | ACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGCAGATAGAGGATAAATaGCTCTTCCAGGAACTTCTA | + |
Preference number: 2 (lower is better) Translates to: TNIFSKDLPNNQCKDDGQQIEDK*LFQELL Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTATCTG...CTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173937.8 ENSMUST00000174073.8 |
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3UTR CCA 72 bp | GCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTaGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTC | + |
Preference number: 3 (lower is better) Translates to: ASTEHSRADGRG*PTQECDGWPWV Trigger: GACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR GCA 72 bp | TCCCTGGAGACGCGGGTGGGGCCCTATGTTTGCGCATaGCCAGGAGCGGCGCTGTCTGAAGACTCACTGCGC | + |
Preference number: 3 (lower is better) Translates to: SLETRVGPYVCA*PGAALSEDSLR Trigger: GCGCAGTGAGTCTTCAGACAGCGCCGCTCCTGGGCATGCGCAAACATAGGGCCCCACCCGCGTCTCCAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR GCA 72 bp | AGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTaGGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTT | + |
Preference number: 3 (lower is better) Translates to: SRADGRGWPTQE*DGWPWVLLTEL Trigger: AAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CCA 72 bp | CGGGGTTGGCCCACTCAGGAGTGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTTGTGATGCACACGGTG | + |
Preference number: 3 (lower is better) Translates to: RGWPTQECDGWP*VLLTELVMHTV Trigger: CACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CCA 72 bp | GACGGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTaGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCAC | + |
Preference number: 3 (lower is better) Translates to: DGRGWPTQECDG*PWVLLTELVMH Trigger: GTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR CAA 90 bp | TCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG | + |
Preference number: 3 (lower is better) Translates to: SAYTLGPASTEHSRADGRHSAYT*GPASTE Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...CCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR CAA 90 bp | GAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG | + |
Preference number: 3 (lower is better) Translates to: EASWPIILPTPWAQHPPSHSAYT*GPASTE Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...GCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CCA 72 bp | GCCCTGGCTGTCCTGGACTCACTCTGTAGACCAGGCTaGCCTGGAACTCAGAAATCCGCCTGCCTCTGCCTC | + |
Preference number: 3 (lower is better) Translates to: ALAVLDSLCRPG*PGTQKSACLCL Trigger: GAGGCAGAGGCAGGCGGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTGAGTCCAGGACAGCCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000152126.8 |
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3UTR-3UTR CAA 90 bp | CCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGCATTTTGCCCAGGGCCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG | + |
Preference number: 3 (lower is better) Translates to: PAHSCLLAGLTVEHFAQGHSAYT*GPASTE Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...GCCCTGGGCAAAATGCTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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3UTR CCA 72 bp | AGAGAGGCCAGCTGGCCAATCATTCTGCCTACACCTTaGGCCCAGCATCCACCGAGCACAGCAGAGCTGACG | + |
Preference number: 3 (lower is better) Translates to: REASWPIILPTP*AQHPPSTAELT Trigger: CGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR CAA 90 bp | AGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCACATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG | + |
Preference number: 3 (lower is better) Translates to: SWPIILPTPWAQHPPSTAHSAYT*GPASTE Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...TGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR-3UTR CAA 90 bp | GCAGCTAGGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGTCTGGCCATTCCTGGTaGAGACTGCAGCCAGCCCTT | + |
Preference number: 3 (lower is better) Translates to: AARWCPAHSCLLAGLTVESGHSW*RLQPAL Trigger: AAGGGCTGGCTGCAGTCTCAACCAGGAATGGCCAGA...CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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3UTR TCA 72 bp | TTGCAGGTCGGGATGGAATTGCGAGTGCACCTGGGGTaGGGGGCTGGACCTTCCGGCGAAATGCTGTCACAT | + |
Preference number: 3 (lower is better) Translates to: LQVGMELRVHLG*GAGPSGEMLSH Trigger: ATGTGACAGCATTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR GCA 72 bp | CATCTTACTCGCACGCCCCCGCACTGCACTGAAGAATaGGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGG | + |
Preference number: 3 (lower is better) Translates to: HLTRTPPHCTEE*GALAGLGKRMR Trigger: CCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCTTCAGTGCAGTGCGGGGGCGTGCGAGTAAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR GCA 72 bp | AGGTGTCTACATTGCAGGTCGGGATGGAATTGCGAGTaGACCTGGGGTGAGGGGCTGGACCTTCCGGCGAAA | + |
Preference number: 3 (lower is better) Translates to: RCLHCRSGWNCE*TWGEGLDLPAK Trigger: TTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAGACACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 72 bp | AAAGCTGCTGCTGGCCAGATGTTTGCTGCAGCTAGGTaGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTG | + |
Preference number: 3 (lower is better) Translates to: KAAAGQMFAAAR*CPAHSCLLAGL Trigger: CAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGCAGCAAACATCTGGCCAGCAGCAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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3UTR CCA 72 bp | GAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTaGATCCCCAAGCCCGTATTTCTCCCAGAGGTACGA | + |
Preference number: 3 (lower is better) Translates to: EGDLSTLQWTGG*IPKPVFLPEVR Trigger: TCGTACCTCTGGGAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 72 bp | CTACATTGCAGGTCGGGATGGAATTGCGAGTGCACCTaGGGTGAGGGGCTGGACCTTCCGGCGAAATGCTGT | + |
Preference number: 3 (lower is better) Translates to: LHCRSGWNCECT*GEGLDLPAKCC Trigger: ACAGCATTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR-3UTR CAA 90 bp | GCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTGTGCTGCCCTTCGTCTaGTTTGTTTGTTTTGGGTTT | + |
Preference number: 3 (lower is better) Translates to: AYTLGPASTEHSRADGRGVLPFV*FVCFGF Trigger: AAACCCAAAACAAACAAACAAGACGAAGGGCAGCAC...ACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000152126.8 |
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3UTR-3UTR CAA 90 bp | GCCCTGGGTCTTGCTCACCGAGCTTGTGATGCACACGGTGATCCCTGTGATGGTACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAAC | + |
Preference number: 3 (lower is better) Translates to: ALGLAHRACDAHGDPCDGTMARE*QMGTAN Trigger: GTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGT...ACCATCACAGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR TCA 72 bp | GGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTaGCAGTTGAGCATTTTGCCCAGGGCCAGCTTGTTT | + |
Preference number: 3 (lower is better) Translates to: GGVRHTAVYLRG*QLSILPRASLF Trigger: AAACAAGCTGGCCCTGGGCAAAATGCTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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3UTR TCA 72 bp | CACATAACATCTTACTCGCACGCCCCCGCACTGCACTaGAGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAG | + |
Preference number: 3 (lower is better) Translates to: HITSYSHAPALH*RMRSSGRVREE Trigger: CTCTTCCCTAACCCGGCCAGAGCTCCGCATTCTTCAGTGCAGTGCGGGGGCGTGCGAGTAAGATGTTATGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR GCA 72 bp | TTCGAAAGGTGTCTACATTGCAGGTCGGGATGGAATTaGGAGTGCACCTGGGGTGAGGGGCTGGACCTTCCG | + |
Preference number: 3 (lower is better) Translates to: FERCLHCRSGWN*ECTWGEGLDLP Trigger: CGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAGACACCTTTCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 72 bp | GAGTCCCTGTTCTGGCTTGCACCTTCCCACGGGGGTTaGCATGGTTACAAATGCTCAGGGACCGCTCATGTG | + |
Preference number: 3 (lower is better) Translates to: ESLFWLAPSHGG*HGYKCSGTAHV Trigger: CACATGAGCGGTCCCTGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129515.8 ENSMUST00000172774.8 |
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3UTR TCA 72 bp | GTAATGGAGCTGTGGAGGCTTCTGGCCATTCCTGGTTaGGACTGCAGCCAGCCCTTTCCATGTAATGGAGGC | + |
Preference number: 3 (lower is better) Translates to: VMELWRLLAIPG*DCSQPFPCNGG Trigger: GCCTCCATTACATGGAAAGGGCTGGCTGCAGTCTCAACCAGGAATGGCCAGAAGCCTCCACAGCTCCATTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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3UTR CCA 72 bp | GTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTaGACTGGGGGCTGGATCCCCAAGCCCGTATTTCTC | + |
Preference number: 3 (lower is better) Translates to: VQEIEGDLSTLQ*TGGWIPKPVFL Trigger: GAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 72 bp | CTTGTTCTCTACATTAGGCCGGCTTCCGAGGCTTCTTaGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGT | + |
Preference number: 3 (lower is better) Translates to: LVLYIRPASEAS*SDVNSRAFEPS Trigger: ACTCGGCTCGAAGGCTCTGGAATTGACGTCGGACCAAGAAGCCTCGGAAGCCGGCCTAATGTAGAGAACAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR-3UTR CAA 90 bp | TCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG | + |
Preference number: 3 (lower is better) Translates to: SPRTFPTISVKTMARELQHSAYT*GPASTE Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...CTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
||
3UTR GCA 72 bp | TGCAAAGATCTCTCTCTTTTGGGCTCAGAGGTCGAGTaGTTGCCCACCATGTGCAAGGGCTTGGCAACGACA | + |
Preference number: 3 (lower is better) Translates to: CKDLSLLGSEVE*LPTMCKGLATT Trigger: TGTCGTTGCCAAGCCCTTGCACATGGTGGGCAAGCACTCGACCTCTGAGCCCAAAAGAGAGAGATCTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
||
3UTR CCA 72 bp | TCACAGTCCTTGACTGACACAGACAGAAGCTACACTTaGCAGAGAATGCTGAGCCTGAGGACCAGCCAGCTG | + |
Preference number: 3 (lower is better) Translates to: SQSLTDTDRSYT*QRMLSLRTSQL Trigger: CAGCTGGCTGGTCCTCAGGCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
||
3UTR-3UTR CAA 90 bp | CAGTCCTTGACTGACACAGACAGAAGCTACACTTGGCAGAGAATGCTGAGCCTGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAAC | + |
Preference number: 3 (lower is better) Translates to: QSLTDTDRSYTWQRMLSLTMARE*QMGTAN Trigger: GTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGT...CAGGCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR TCA 72 bp | GCATGGTTACAAATGCTCAGGGACCGCTCATGTGTTTaGAGACCCCTTAAGAGTAGTCCTGGAGCCTGGCAG | + |
Preference number: 3 (lower is better) Translates to: AWLQMLRDRSCV*RPLKSSPGAWQ Trigger: CTGCCAGGCTCCAGGACTACTCTTAAGGGGTCTTCAAACACATGAGCGGTCCCTGAGCATTTGTAACCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129515.8 |
||
3UTR GCA 72 bp | GCTGCCGCTTCCATCAGGTCTCTTACTGGGTCACACTaGTGCTTTCCCACCAATATCTTCTCCAAGGACCTT | + |
Preference number: 3 (lower is better) Translates to: AAASIRSLTGSH*CFPTNIFSKDL Trigger: AAGGTCCTTGGAGAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGTAAGAGACCTGATGGAAGCGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174073.8 |
||
3UTR-3UTR CAA 90 bp | GTTGTGCCCTGGTGTGGTGGTCCTGAACACACACACACACACCTGTACAGTGTGGGTCGGGGGCACTGGTaGGAATTAAACAAACAGAAA | + |
Preference number: 3 (lower is better) Translates to: VVPWCGGPEHTHTHLYSVGRGHW*ELNKQK Trigger: TTTCTGTTTGTTTAATTCCAACCAGTGCCCCCGACC...CACACTGTACAGGTGTGTGTGTGTGTGTTCAGGACCACCACACCAGGGCACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
||
3UTR CCA 72 bp | CAGAGGTCGAGTGCTTGCCCACCATGTGCAAGGGCTTaGCAACGACAAAATCAAGAGTGCTTGCCAAAATAC | + |
Preference number: 3 (lower is better) Translates to: QRSSACPPCARA*QRQNQECLPKY Trigger: GTATTTTGGCAAGCACTCTTGATTTTGTCGTTGCCAAGCCCTTGCACATGGTGGGCAAGCACTCGACCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
||
3UTR CCA 72 bp | GTGGTCCTGAACACACACACACACACCTGTACAGTGTaGGAAGACGTGGATACACAGGTCCAAAGTGTCACA | + |
Preference number: 3 (lower is better) Translates to: VVLNTHTHTCTV*EDVDTQVQSVT Trigger: TGTGACACTTTGGACCTGTGTATCCACGTCTTCCCACACTGTACAGGTGTGTGTGTGTGTGTTCAGGACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CCA 72 bp | GGACCGCTCATGTGTTTGAAGACCCATAGGCAGCCATaGGCAGTTCTCGATAGCTTTCCTTATGTTCTACCC | + |
Preference number: 3 (lower is better) Translates to: GPLMCLKTHRQP*AVLDSFPYVLP Trigger: GGGTAGAACATAAGGAAAGCTATCGAGAACTGCCCATGGCTGCCTATGGGTCTTCAAACACATGAGCGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174610.2 |
||
3UTR TCA 72 bp | CCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTAATAGGCAGCCATGG | + |
Preference number: 3 (lower is better) Translates to: PKSSSREGIHSD*GERASGNRQPW Trigger: CCATGGCTGCCTATTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135628.8 ENSMUST00000145345.2 |
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3UTR TCA 72 bp | CCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTC | + |
Preference number: 3 (lower is better) Translates to: PKSSSREGIHSD*GERASGTSSRV Trigger: GACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000150110.8 ENSMUST00000172774.8 |
||
3UTR-3UTR CAA 90 bp | AGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCGAAAGAAAGCTCAACTaGGTGATGATGACCTTAAGA | + |
Preference number: 3 (lower is better) Translates to: RTFPTISVKTMARELQMGERKLN*VMMTLR Trigger: TCTTAAGGTCATCATCACCAAGTTGAGCTTTCTTTC...GCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135628.8 ENSMUST00000145345.2 |
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3UTR-3UTR CAA 90 bp | CAGCTAACGTCAGATCTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACGGACCGCTCATGTGTTaGAAGACCCAGAGGATAAAT | + |
Preference number: 3 (lower is better) Translates to: QLTSDLLMPKSSSREGIHGPLMC*KTQRIN Trigger: ATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCC...GTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAGATCTGACGTTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172774.8 |
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3UTR TCA 72 bp | TGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTaGGATAGACATGATCTGAGAGATGAGAGAGGCCAG | + |
Preference number: 3 (lower is better) Translates to: WHYGEYVSYCGP*DRHDLRDERGQ Trigger: CTGGCCTCTCTCATCTCTCAGATCATGTCTATCTCAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR TCA 72 bp | TCGATAGCTTTCCTTATGTTCTACCCCAGGGCAAGTTaGGCCGAAAGAAAGCTCAACTTGGTGATGATGACC | + |
Preference number: 3 (lower is better) Translates to: SIAFLMFYPRAS*AERKLNLVMMT Trigger: GGTCATCATCACCAAGTTGAGCTTTCTTTCGGCTCAACTTGCCCTGGGGTAGAACATAAGGAAAGCTATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135628.8 ENSMUST00000145345.2 ENSMUST00000174610.2 |
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3UTR TCA 72 bp | GGGACCGCTCATGTGTTTGAAGACCCAGAGGATAAATaGCTCTTCCAGGAACTTCTAGTGAGTAAGAGATGG | + |
Preference number: 3 (lower is better) Translates to: GTAHVFEDPEDK*LFQELLVSKRW Trigger: CCATCTCTTACTCACTAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172774.8 |
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3UTR GCA 72 bp | CCGTGGAACCCACTAAAGGTTACAAAACCTTCCCAGTaGTGCCCTTCGTCTTGTTTGTTTGTTTTGGGTTTT | + |
Preference number: 3 (lower is better) Translates to: PWNPLKVTKPSQ*CPSSCLFVLGF Trigger: AAAACCCAAAACAAACAAACAAGACGAAGGGCAGCACTGGGAAGGTTTTGTAACCTTTAGTGGGTTCCACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000152126.8 |
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CDS-3UTR GCA 90 bp | CCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: PWAQHPPSTAELTVGVGPRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...TGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: LPTPWAQHPPSTAELTVGSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: AYTLGPASTEHSRADGRGRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...ACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: QHPPSTAELTVGVGPLRSSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...ACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | TGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: WPTQECDGWPWVLLTELVRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | TACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: YTLGPASTEHSRADGRGWRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | TTGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC | + |
Preference number: 4 (lower is better) Translates to: LAHSGVRRLALGLAHRACRATPQ*GHQHQS Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...ACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: EASWPIILPTPWAQHPPSSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GCAGCTAGGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC | + |
Preference number: 4 (lower is better) Translates to: AARWCPAHSCLLAGLTVERATPQ*GHQHQS Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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CDS-3UTR GCA 90 bp | GCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: AGQSFCLHLGPSIHRAQQSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTGGCTTGCACCTTCCCACGGGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: GHQVPVRESLFWLAPSHGRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCTCGAACTGGTACCTGATGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000150110.8 ENSMUST00000172774.8 |
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CDS-3UTR GCA 90 bp | CCTATGTTTGCGCATGCCCAGGAGCGGCGCTGTCTGAAGACTCACTGCGCAAACCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: PMFAHAQERRCLKTHCANRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...GTTTGCGCAGTGAGTCTTCAGACAGCGCCGCTCCTGGGCATGCGCAAACATAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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CDS-3UTR GCA 90 bp | CTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGACGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: LANHSAYTLGPASTEHSRRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...TCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR CCA 90 bp | AGAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCAGGAGTGCGACGGTTaGCCCTGGGTCTTGCTCACC | + |
Preference number: 4 (lower is better) Translates to: RGQLANHSAYTLGPASTEQECDG*PWVLLT Trigger: GGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTG...CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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3UTR CAA 72 bp | TGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTaGCTCACCGAGCTTGTGATGCACACGGTGATCCCT | + |
Preference number: 4 (lower is better) Translates to: WPTQECDGWPWV*LTELVMHTVIP Trigger: AGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CTTGGTGATGATGACCTTAAGAGTAGTCCTGGAGCCTGGCAGTGGTGGCGCCTTCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: LGDDDLKSSPGAWQWWRLRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...AAGGCGCCACCACTGCCAGGCTCCAGGACTACTCTTAAGGTCATCATCACCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135628.8 ENSMUST00000145345.2 ENSMUST00000174610.2 |
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3UTR CAA 72 bp | GAGAGAGGCCAGCTGGCCAATCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAGCACAGCAGAGCTGAC | + |
Preference number: 4 (lower is better) Translates to: ERGQLANHSAYT*GPASTEHSRAD Trigger: GTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CGATGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCATCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: RWPESCRWAQLTSDLLMPSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...TGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 |
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CDS-3UTR GCA 90 bp | TCCCAGCACTCAGGAGTCAGATGCAGGCTGATCTCTGAATTCGAGGCTAGTGAGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: SQHSGVRCRLISEFEASESAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CTCACTAGCCTCGAATTCAGAGATCAGCCTGCATCTGACTCCTGAGTGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000174610.2 |
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CDS-3UTR GCA 90 bp | ACTCTGATTGAGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTGGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: TLIEEKGHQVPVRESLFWSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CCAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAATCAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129515.8 ENSMUST00000150110.8 ENSMUST00000172774.8 |
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CDS-3UTR GCA 90 bp | ACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCACATCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: TFPTISVKTMARELQMGTSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...TGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: EPSMRQLYKRLRVTSALFSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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CDS-3UTR GCA 90 bp | TGTAACTTCTGTCCCCAAATCCCACCTTCAGCCAGCCAAAGCACTGTAATGGAGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: CNFCPQIPPSASQSTVMERFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CTCCATTACAGTGCTTTGGCTGGCTGAAGGTGGGATTTGGGGACAGAAGTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000152126.8 |
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CDS-3UTR GCA 90 bp | GCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: ANHSAYTLGPASTEHSRARAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...AGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR TCA 90 bp | GCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGT | + |
Preference number: 4 (lower is better) Translates to: ANHSAYTLGPASTEHSRAGIHSD*GERASG Trigger: ACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCC...AGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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CDS-3UTR GCA 90 bp | TCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC | + |
Preference number: 4 (lower is better) Translates to: SKDLPNNQCKDDGQRVADRATPQ*GHQHQS Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...ATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC | + |
Preference number: 4 (lower is better) Translates to: RQFQSLRAEYEAIVQEIERATPQ*GHQHQS Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...CTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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CDS-3UTR GCA 90 bp | AGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAAGTCAAGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: RELQMGTANVRSVDAKVKSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CTTGACTTTGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 |
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CDS-3UTR GCA 90 bp | CCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: PTNIFSKDLPNNQCKDDGSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: PPISSPRTFPTISVKTMASAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CACACGGTGATCCCTGTGATGGTGAGCACCATGCCAGCCACTGCTTCTTTCCCAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: HTVIPVMVSTMPATASFPRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TGGGAAAGAAGCAGTGGCTGGCATGGTGCTCACCATCACAGGGATCACCGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR CCA 90 bp | GCAGCTAGGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGCCAGAGAGTTGCAGATaGGCACAGCTAACGTCAGAT | + |
Preference number: 4 (lower is better) Translates to: AARWCPAHSCLLAGLTVEPESCR*AQLTSD Trigger: ATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGG...CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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3UTR CAA 72 bp | AGAGTCCCTGTTCTGGCTTGCACCTTCCCACGGGGGTaGGCATGGTTACAAATGCTCAGGGACCGCTCATGT | + |
Preference number: 4 (lower is better) Translates to: RVPVLACTFPRG*AWLQMLRDRSC Trigger: ACATGAGCGGTCCCTGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129515.8 ENSMUST00000172774.8 |
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CDS-3UTR GCA 90 bp | ATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: IFSKDLPNNQCKDDGQRVRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...AACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTCACCATGCCAGCCACTaGTTCTTTCCCACCAATATC | + |
Preference number: 4 (lower is better) Translates to: ANHSAYTLGPASTEHSRAHHASH*FFPTNI Trigger: GATATTGGTGGGAAAGAAGCAGTGGCTGGCATGGTG...AGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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CDS-3UTR TCA 90 bp | AATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACAGAAGGGATCCACTCTaGTTGAGGAGAAAGGGCATC | + |
Preference number: 4 (lower is better) Translates to: NHSAYTLGPASTEHSRADRRDPL*LRRKGI Trigger: GATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCT...GTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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CDS-3UTR GCA 90 bp | GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC | + |
Preference number: 4 (lower is better) Translates to: ASEFRVARDTQRNLEFLYRATPQ*GHQHQS Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127919.2 |
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CDS-3UTR GCA 90 bp | GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA | + |
Preference number: 4 (lower is better) Translates to: ASEFRVARDTQRNLEFLYSAAAA*HPTVRP Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127919.2 |
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CDS-3UTR GCA 90 bp | GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: ASEFRVARDTQRNLEFLYRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127919.2 |
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CDS-3UTR GCA 90 bp | AATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGACGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: NIFSKDLPNNQCKDDGQRRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...TCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CGATGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: RWPESCRWAQLTSDLLMPRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 |
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CDS-3UTR GCA 90 bp | TCATCTCCAGCCAGCTTAGCTCCCTCCAGCTCCAGTTCCCCTGATGCTTGTTTTAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: SSPASLAPSSSSSPDACFRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...AAAACAAGCATCAGGGGAACTGGAGCTGGAGGGAGCTAAGCTGGCTGGAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174073.8 |
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CDS-3UTR GCA 90 bp | AATGCTCAGGGACCGCTCATGTGTTTGAAGACCCATAGGCAGCCATGGGCAGTTAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: NAQGPLMCLKTHRQPWAVRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...AACTGCCCATGGCTGCCTATGGGTCTTCAAACACATGAGCGGTCCCTGAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174610.2 |
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3UTR CAA 72 bp | GCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATaGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGG | + |
Preference number: 4 (lower is better) Translates to: AFEPSMRQLYKR*RVTSALFSGLG Trigger: CCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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CDS-3UTR GCA 90 bp | TTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: FPTNIFSKDLPNNQCKDDRFSSG*VPPHSA Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...ATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCACAGCAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: LPNNQCKDDGQRVADGHSRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...GCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | AGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: RTFPTISVKTMARELQMGRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...GCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | AAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: KDLPNNQCKDDGQRVADGRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...CCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR CCA 90 bp | CTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTGAGATATGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTT | + |
Preference number: 4 (lower is better) Translates to: LCSLGTMESMFLIVAPEICDGWP*VLLTEL Trigger: AAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCA...TATCTCAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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CDS-3UTR GCA 90 bp | TTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: FSKDLPNNQCKDDGQRVARAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | CTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTGAGATAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: LCSLGTMESMFLIVAPEIRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TATCTCAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: EAGFLCSLGTMESMFLIVRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...CACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CAA 72 bp | GTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATaGTACAAGAGATTGAGGGTGACCTCAGCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: VNSRAFEPSMRQ*YKRLRVTSALF Trigger: GAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CAA 72 bp | TCAGAGGTCGAGTGCTTGCCCACCATGTGCAAGGGCTaGGCAACGACAAAATCAAGAGTGCTTGCCAAAATA | + |
Preference number: 4 (lower is better) Translates to: SEVECLPTMCKG*ATTKSRVLAKI Trigger: TATTTTGGCAAGCACTCTTGATTTTGTCGTTGCCAAGCCCTTGCACATGGTGGGCAAGCACTCGACCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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CDS-3UTR GCA 90 bp | TTGAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: LRQGFCVALALWRVCFLLRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...CAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000102591.10 ENSMUST00000129515.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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CDS-3UTR GCA 90 bp | GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: ASEFRVARDTQRNLEFLYRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127919.2 |
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3UTR CAA 72 bp | AAGACGTGGATACACAGGTCCAAAGTGTCACAGTCCTaGACTGACACAGACAGAAGCTACACTTGGCAGAGA | + |
Preference number: 4 (lower is better) Translates to: KTWIHRSKVSQS*TDTDRSYTWQR Trigger: TCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGACACTTTGGACCTGTGTATCCACGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137090.8 |
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3UTR CAA 72 bp | GGCATGGTTACAAATGCTCAGGGACCGCTCATGTGTTaGAAGACCCAGAGGATAAATGACTCTTCCAGGAAC | + |
Preference number: 4 (lower is better) Translates to: GMVTNAQGPLMC*KTQRINDSSRN Trigger: GTTCCTGGAAGAGTCATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCCCTGAGCATTTGTAACCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172774.8 |
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CDS-3UTR GCA 90 bp | TTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC | + |
Preference number: 4 (lower is better) Translates to: FFPTNIFSKDLPNNQCKDRAFIS*NSCQAH Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...GTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000129515.8 ENSMUST00000145345.2 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174819.8 |
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3UTR CAA 72 bp | CTCGATAGCTTTCCTTATGTTCTACCCCAGGGCAAGTaGAGCCGAAAGAAAGCTCAACTTGGTGATGATGAC | + |
Preference number: 4 (lower is better) Translates to: LDSFPYVLPQGK*SRKKAQLGDDD Trigger: GTCATCATCACCAAGTTGAGCTTTCTTTCGGCTCAACTTGCCCTGGGGTAGAACATAAGGAAAGCTATCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135628.8 ENSMUST00000145345.2 ENSMUST00000174610.2 |
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3UTR CAA 72 bp | TTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAACGTCAGATCTGTTGAT | + |
Preference number: 4 (lower is better) Translates to: FPTISVKTMARE*QMGTANVRSVD Trigger: ATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 |
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CDS GCA 90 bp | GCCGGAGGAGGCTCGCTTCAGCAGCGGCTGCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGCAAGCACCTGCCCCCAGGACGCCGC | + |
Preference number: 5 (lower is better) Translates to: AGGGSLQQRLRATPQ*GHQHQSKHLPPGRR Trigger: GCGGCGTCCTGGGGGCAGGTGCTTGCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCGAGCCTCCTCCGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENSMUST00000102591.10 ENSMUST00000127919.2 ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173758.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174819.8 ENSMUST00000181579.8 |
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CDS GCA 90 bp | TTTATCTCCTGCAACAGCTGCCAGGCCCACGTCCGCTCACGCACTTaGTCCAGGCCGGAGGAGGCTCGCTTCAGCAGCGGCTGCGTGCCA | + |
Preference number: 5 (lower is better) Translates to: FISCNSCQAHVRSRT*SRPEEARFSSGCVP Trigger: TGGCACGCAGCCGCTGCTGAAGCGAGCCTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENSMUST00000102591.10 ENSMUST00000127919.2 ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173758.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174610.2 ENSMUST00000174819.8 ENSMUST00000181579.8 |
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CDS GCA 90 bp | CGCACCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGGCCGGAGGAG | + |
Preference number: 5 (lower is better) Translates to: RTSVFPKRAFISCNS*QAHVRSRTCSRPEE Trigger: CTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000127919.2 ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174610.2 |
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CDS GCA 90 bp | GACCCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGGCCGGAGGAG | + |
Preference number: 5 (lower is better) Translates to: DPSVFPKRAFISCNS*QAHVRSRTCSRPEE Trigger: CTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150110.8 |
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CDS-3UTR CAA 90 bp | AGAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGGGTTGGCCCTGGGTCTaGCTCACCGAGCTTGTGATG | + |
Preference number: 5 (lower is better) Translates to: RGQLANHSAYTLGPASTEGWPWV*LTELVM Trigger: CATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACC...CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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CDS GCA 90 bp | AAACCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGGCCGGAGGAG | + |
Preference number: 5 (lower is better) Translates to: KPSVFPKRAFISCNS*QAHVRSRTCSRPEE Trigger: CTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145345.2 |
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CDS GCA 90 bp | AGAGCTAGACGCACCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACTTGCTCCAGG | + |
Preference number: 5 (lower is better) Translates to: RARRTSVFPKRAFIS*NSCQAHVRSRTCSR Trigger: CCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGTGCGTCTAGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000127919.2 ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174610.2 |
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CDS GCA 90 bp | GTGTTTGAAGACCCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACTTGCTCCAGG | + |
Preference number: 5 (lower is better) Translates to: VFEDPSVFPKRAFIS*NSCQAHVRSRTCSR Trigger: CCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGGTCTTCAAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150110.8 |
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CDS-3UTR CAA 90 bp | GGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAAC | + |
Preference number: 5 (lower is better) Translates to: GFCVALALWRVCFLLWPLTMARE*QMGTAN Trigger: GTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGT...CAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102591.10 |
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CDS TCA 90 bp | CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACTCAGTATTCCCGAAGAGAGCCT | + |
Preference number: 5 (lower is better) Translates to: LLMPKSSSREGIHSD*GERASGTQYSRREP Trigger: AGGCTCTCTTCGGGAATACTGAGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000181579.8 |
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CDS CAA 90 bp | CTTTATCTCCTGCAACAGCTGCCAGGCCCACGTCCGCTCACGCACTaGCTCCAGGCCGGAGGAGGCTCGCTTCAGCAGCGGCTGCGTGCC | + |
Preference number: 6 (lower is better) Translates to: LYLLQQLPGPRPLTH*LQAGGGSLQQRLRA Trigger: GGCACGCAGCCGCTGCTGAAGCGAGCCTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENSMUST00000102591.10 ENSMUST00000127919.2 ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173758.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174610.2 ENSMUST00000174819.8 ENSMUST00000181579.8 |
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CDS GCA 72 bp | GTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: VFPKRAFISCNS*QAHVRSRTCSR Trigger: CCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENSMUST00000102591.10 ENSMUST00000127919.2 ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000145345.2 ENSMUST00000150110.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173758.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174610.2 ENSMUST00000174819.8 ENSMUST00000181579.8 |
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CDS GCA 72 bp | CGCACCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACT | + |
Preference number: 6 (lower is better) Translates to: RTSVFPKRAFIS*NSCQAHVRSRT Trigger: AGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000127919.2 ENSMUST00000129515.8 ENSMUST00000135628.8 ENSMUST00000137090.8 ENSMUST00000151969.8 ENSMUST00000152126.8 ENSMUST00000172774.8 ENSMUST00000173937.8 ENSMUST00000174073.8 ENSMUST00000174610.2 |
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CDS GCA 72 bp | GACCCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACT | + |
Preference number: 6 (lower is better) Translates to: DPSVFPKRAFIS*NSCQAHVRSRT Trigger: AGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150110.8 |
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CDS GCA 72 bp | AAACCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACT | + |
Preference number: 6 (lower is better) Translates to: KPSVFPKRAFIS*NSCQAHVRSRT Trigger: AGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145345.2 |
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CDS TCA 72 bp | CCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACTCAGTATTCCCGA | + |
Preference number: 6 (lower is better) Translates to: PKSSSREGIHSD*GERASGTQYSR Trigger: TCGGGAATACTGAGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102591.10 ENSMUST00000181579.8 |