RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM234 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028797

Ensembl transcript IDs: ENSMUST00000102591.10, ENSMUST00000127919.2, ENSMUST00000129515.8, ENSMUST00000135628.8, ENSMUST00000137090.8, ENSMUST00000145345.2, ENSMUST00000150110.8, ENSMUST00000151969.8, ENSMUST00000152126.8, ENSMUST00000172774.8, ENSMUST00000173758.8, ENSMUST00000173937.8, ENSMUST00000174073.8, ENSMUST00000174610.2, ENSMUST00000174819.8, ENSMUST00000181579.8

Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTaGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACC +
Preference number: 1 (lower is better)
Translates to: LGPASTEHSRADGRG*PTQECDGWPWVLLT
Trigger: GGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR GCA 90 bp ACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTaGGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCAC +
Preference number: 1 (lower is better)
Translates to: TEHSRADGRGWPTQE*DGWPWVLLTELVMH
Trigger: GTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CCA 90 bp GCTGACGGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTTGTGATGCACACGGTGATCCCTGTG +
Preference number: 1 (lower is better)
Translates to: ADGRGWPTQECDGWP*VLLTELVMHTVIPV
Trigger: CACAGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CCA 90 bp AGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTaGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCACACGGTGATC +
Preference number: 1 (lower is better)
Translates to: SRADGRGWPTQECDG*PWVLLTELVMHTVI
Trigger: GATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CCA 90 bp CAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTaGATCCCCAAGCCCGTATTTCTCCCAGAGGTACGACACTTTCCC +
Preference number: 1 (lower is better)
Translates to: QEIEGDLSTLQWTGG*IPKPVFLPEVRHFP
Trigger: GGGAAAGTGTCGTACCTCTGGGAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 90 bp GAAAGGTGTCTACATTGCAGGTCGGGATGGAATTGCGAGTGCACCTaGGGTGAGGGGCTGGACCTTCCGGCGAAATGCTGTCACATAACA +
Preference number: 1 (lower is better)
Translates to: ERCLHCRSGWNCECT*GEGLDLPAKCCHIT
Trigger: TGTTATGTGACAGCATTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAGACACCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 90 bp GCGGATCACAGTCGCTCTGGCTGCCGCTTCCATCAGGTCTCTTACTaGGTCACACTGCTGCTTTCCCACCAATATCTTCTCCAAGGACCT +
Preference number: 1 (lower is better)
Translates to: ADHSRSGCRFHQVSY*VTLLLSHQYLLQGP
Trigger: AGGTCCTTGGAGAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGTAAGAGACCTGATGGAAGCGGCAGCCAGAGCGACTGTGATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174073.8
3UTR TCA 90 bp AAATGCTGTCACATAACATCTTACTCGCACGCCCCCGCACTGCACTaGAGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGGGT +
Preference number: 1 (lower is better)
Translates to: KCCHITSYSHAPALH*RMRSSGRVREENEG
Trigger: ACCCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCTTCAGTGCAGTGCGGGGGCGTGCGAGTAAGATGTTATGTGACAGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 90 bp GATTTATTGAAAGCTGCTGCTGGCCAGATGTTTGCTGCAGCTAGGTaGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAG +
Preference number: 1 (lower is better)
Translates to: DLLKAAAGQMFAAAR*CPAHSCLLAGLTVE
Trigger: CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGCAGCAAACATCTGGCCAGCAGCAGCTTTCAATAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
3UTR CCA 90 bp GAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTaGACTGGGGGCTGGATCCCCAAGCCCGTATTTCTCCCAGAGGTA +
Preference number: 1 (lower is better)
Translates to: EAIVQEIEGDLSTLQ*TGGWIPKPVFLPEV
Trigger: TACCTCTGGGAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR GCA 90 bp GTCGCTCTGGCTGCCGCTTCCATCAGGTCTCTTACTGGGTCACACTaGTGCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAAT +
Preference number: 1 (lower is better)
Translates to: VALAAASIRSLTGSH*CFPTNIFSKDLPNN
Trigger: ATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGTAAGAGACCTGATGGAAGCGGCAGCCAGAGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174073.8
3UTR CCA 90 bp ATTGAGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTaGCTTGCACCTTCCCACGGGGGTTGGCATGGTTACAAATGCTCA +
Preference number: 1 (lower is better)
Translates to: IEEKGHQVPVRESLF*LAPSHGGWHGYKCS
Trigger: TGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000150110.8
ENSMUST00000172774.8
3UTR CCA 90 bp GCTTTTCCACTTGTTCTCTACATTAGGCCGGCTTCCGAGGCTTCTTaGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAA +
Preference number: 1 (lower is better)
Translates to: AFPLVLYIRPASEAS*SDVNSRAFEPSMRQ
Trigger: TTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGACGTCGGACCAAGAAGCCTCGGAAGCCGGCCTAATGTAGAGAACAAGTGGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 90 bp TCCAAAGTGTCACAGTCCTTGACTGACACAGACAGAAGCTACACTTaGCAGAGAATGCTGAGCCTGAGGACCAGCCAGCTGCGTAGGTGT +
Preference number: 1 (lower is better)
Translates to: SKVSQSLTDTDRSYT*QRMLSLRTSQLRRC
Trigger: ACACCTACGCAGCTGGCTGGTCCTCAGGCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGACACTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 90 bp CCTGGTGTGGTGGTCCTGAACACACACACACACACCTGTACAGTGTaGGAAGACGTGGATACACAGGTCCAAAGTGTCACAGTCCTTGAC +
Preference number: 1 (lower is better)
Translates to: PGVVVLNTHTHTCTV*EDVDTQVQSVTVLD
Trigger: GTCAAGGACTGTGACACTTTGGACCTGTGTATCCACGTCTTCCCACACTGTACAGGTGTGTGTGTGTGTGTTCAGGACCACCACACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 90 bp ATGGAGTATACCACCATGCCTGGCTCCAGTGCTAAATCTCAACCGTaGAACCCACTAAAGGTTACAAAACCTTCCCAGTGCTGCCCTTCG +
Preference number: 1 (lower is better)
Translates to: MEYTTMPGSSAKSQP*NPLKVTKPSQCCPS
Trigger: CGAAGGGCAGCACTGGGAAGGTTTTGTAACCTTTAGTGGGTTCCACGGTTGAGATTTAGCACTGGAGCCAGGCATGGTGGTATACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000152126.8
3UTR TCA 90 bp CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTAATAGGCAGCCATGGGCAGTTCTC +
Preference number: 1 (lower is better)
Translates to: LLMPKSSSREGIHSD*GERASGNRQPWAVL
Trigger: GAGAACTGCCCATGGCTGCCTATTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135628.8
ENSMUST00000145345.2
3UTR TCA 90 bp CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTG +
Preference number: 1 (lower is better)
Translates to: LLMPKSSSREGIHSD*GERASGTSSRVPVL
Trigger: CAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000150110.8
ENSMUST00000172774.8
3UTR TCA 90 bp ATGGAGAGTATGTTTCTTATTGTGGCCCCTGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGCTGGCCAATCATTCTGCCTACACCT +
Preference number: 1 (lower is better)
Translates to: MESMFLIVAPEIDMI*EMREASWPIILPTP
Trigger: AGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTCAGGGGCCACAATAAGAAACATACTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR TCA 90 bp AAATGCTCAGGGACCGCTCATGTGTTTGAAGACCCAGAGGATAAATaGCTCTTCCAGGAACTTCTAGTGAGTAAGAGATGGGCTGGGAAT +
Preference number: 1 (lower is better)
Translates to: KCSGTAHVFEDPEDK*LFQELLVSKRWAGN
Trigger: ATTCCCAGCCCATCTCTTACTCACTAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCCCTGAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172774.8
3UTR TCA 90 bp CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTAAGAGGATAAATGACTCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: LLMPKSSSREGIHSD*GERASGKRINDSSR
Trigger: CCTGGAAGAGTCATTTATCCTCTTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000137090.8
ENSMUST00000152126.8
3UTR CAA 90 bp GGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTaGCTCACCGAGCTTGTGATGCACACGGTGATCCCTGTGATGGTG +
Preference number: 2 (lower is better)
Translates to: GRGWPTQECDGWPWV*LTELVMHTVIPVMV
Trigger: CACCATCACAGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR TCA 90 bp GGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: GPASTEHSRADGRGWPTQEIDMI*EMREAS
Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...CTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR TCA 90 bp CCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PTPWAQHPPSTAELTVGVEIDMI*EMREAS
Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...AACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR GCA 90 bp CAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTCACTCAGGAGTCAGATaGAGGCTGATCTCTGAATTC +
Preference number: 2 (lower is better)
Translates to: QHPPSTAELTVGVGPLRSHSGVR*RLISEF
Trigger: GAATTCAGAGATCAGCCTGCATCTGACTCCTGAGTG...ACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
3UTR-3UTR CCA 90 bp AGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGGGTCAGCATCTTCTCCACTCTTCAGTGGACTaGGGGCTGGATCCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: RMRSSGRVREENEGQHLLHSSVD*GLDPQA
Trigger: GGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTG...GAGAAGATGCTGACCCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR-3UTR TCA 90 bp AGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGT +
Preference number: 2 (lower is better)
Translates to: SWPIILPTPWAQHPPSTAGIHSD*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCC...TGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
3UTR CAA 90 bp AGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTGGCTaGCACCTTCCCACGGGGGTTGGCATGGTTACAAATGCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: RRKGIRYQFESPCSG*HLPTGVGMVTNAQG
Trigger: TCCCTGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000150110.8
ENSMUST00000172774.8
3UTR-3UTR GCA 90 bp AGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCATGGAGTATACCACCATaGCTGGCTCCAGTGCTAAAT +
Preference number: 2 (lower is better)
Translates to: RPAGQSFCLHLGPSIHRAWSIPP*LAPVLN
Trigger: ATTTAGCACTGGAGCCAGGCATGGTGGTATACTCCA...TGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000152126.8
3UTR-3UTR TCA 90 bp TCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: SAYTLGPASTEHSRADGRKPEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...CCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129515.8
ENSMUST00000151969.8
3UTR-3UTR TCA 90 bp CACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCAGACCCAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: HSGVRRLALGLAHRACDADPEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGGTC...TGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172774.8
3UTR-3UTR GCA 90 bp CCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGAAACCTTCCCAGTGCTaGCCTTCGTCTTGTTTGTTT +
Preference number: 2 (lower is better)
Translates to: PAGQSFCLHLGPSIHRAQKPSQC*PSSCLF
Trigger: AAACAAACAAGACGAAGGGCAGCACTGGGAAGGTTT...CTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000152126.8
3UTR-3UTR CCA 90 bp CCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG +
Preference number: 2 (lower is better)
Translates to: PTPWAQHPPSTAELTVGVVALAL*RVCFLL
Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...AACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CAA 90 bp AATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATaGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTGGATCC +
Preference number: 2 (lower is better)
Translates to: NSRAFEPSMRQLYKR*RVTSALFSGLGAGS
Trigger: GGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR-3UTR CCA 90 bp AGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGGGTCAGCATCTTCTCCCAGAGAGTTGCAGATaGGCACAGCTAACGTCAGAT +
Preference number: 2 (lower is better)
Translates to: RMRSSGRVREENEGQHLLPESCR*AQLTSD
Trigger: ATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGG...GAGAAGATGCTGACCCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CAA 90 bp TGGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATaGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTGGACTG +
Preference number: 2 (lower is better)
Translates to: WSDVNSRAFEPSMRQ*YKRLRVTSALFSGL
Trigger: CAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGACGTCGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR-3UTR TCA 90 bp GAGCCTGGCAGTGGTGGCGCCTTTAATCCCAGCACTCAGGAGTCAGATGCAGGCAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: EPGSGGAFNPSTQESDAGKPEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...GCCTGCATCTGACTCCTGAGTGCTGGGATTAAAGGCGCCACCACTGCCAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000151969.8
ENSMUST00000174610.2
3UTR-3UTR TCA 90 bp GTGATCCCTGTGATGGTGAGCACCATGCCAGCCACTGCTTCTTTCCCACCAATAAGAAGGGATCCACTCTaGTTGAGGAGAAAGGGCATC +
Preference number: 2 (lower is better)
Translates to: VIPVMVSTMPATASFPPIRRDPL*LRRKGI
Trigger: GATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCT...TATTGGTGGGAAAGAAGCAGTGGCTGGCATGGTGCTCACCATCACAGGGATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
3UTR-3UTR CCA 90 bp CCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG +
Preference number: 2 (lower is better)
Translates to: PAGQSFCLHLGPSIHRAQVALAL*RVCFLL
Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...CTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR CCA 90 bp GAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGTGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTT +
Preference number: 2 (lower is better)
Translates to: EAGFLCSLGTMESMFLIVCDGWP*VLLTEL
Trigger: AAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCA...CACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CAA 90 bp CAGTGTGGGAAGACGTGGATACACAGGTCCAAAGTGTCACAGTCCTaGACTGACACAGACAGAAGCTACACTTGGCAGAGAATGCTGAGC +
Preference number: 2 (lower is better)
Translates to: QCGKTWIHRSKVSQS*TDTDRSYTWQRMLS
Trigger: GCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGACACTTTGGACCTGTGTATCCACGTCTTCCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR-3UTR TCA 90 bp AGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCAGAAGGGATCCACTCTaGTTGAGGAGAAAGGGCATC +
Preference number: 2 (lower is better)
Translates to: RTFPTISVKTMARELQMGRRDPL*LRRKGI
Trigger: GATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCT...GCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
3UTR-3UTR GCA 90 bp TTGGTGATGATGACCTTAAGAGTAGTCCTGGAGCCTGGCAGTGGTGGCGCCTTTCACTCAGGAGTCAGATaGAGGCTGATCTCTGAATTC +
Preference number: 2 (lower is better)
Translates to: LVMMTLRVVLEPGSGGAFHSGVR*RLISEF
Trigger: GAATTCAGAGATCAGCCTGCATCTGACTCCTGAGTG...AAAGGCGCCACCACTGCCAGGCTCCAGGACTACTCTTAAGGTCATCATCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000135628.8
ENSMUST00000145345.2
ENSMUST00000174610.2
3UTR CAA 90 bp CCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAAGTC +
Preference number: 2 (lower is better)
Translates to: PRTFPTISVKTMARE*QMGTANVRSVDAKV
Trigger: GACTTTGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
3UTR-3UTR TCA 90 bp GATAGACATGATCTGAGAGATGAGAGAGGCCAGCTGGCCAATCATTCTGCCTACGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: DRHDLRDERGQLANHSAYEIDMI*EMREAS
Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...GTAGGCAGAATGATTGGCCAGCTGGCCTCTCTCATCTCTCAGATCATGTCTATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR GCA 90 bp TGTAACTTCTGTCCCCAAATCCCACCTTCAGCCAGCCAAAGCACTGTAATGGAGCACCATGCCAGCCACTaGTTCTTTCCCACCAATATC +
Preference number: 2 (lower is better)
Translates to: CNFCPQIPPSASQSTVMEHHASH*FFPTNI
Trigger: GATATTGGTGGGAAAGAAGCAGTGGCTGGCATGGTG...CTCCATTACAGTGCTTTGGCTGGCTGAAGGTGGGATTTGGGGACAGAAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152126.8
3UTR-3UTR GCA 90 bp CTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCACAGCACTGGGTCACACTGCTaGTTTCCCACCAATATCTTC +
Preference number: 2 (lower is better)
Translates to: LPNNQCKDDGQRVADGHSTGSHC*FPTNIF
Trigger: GAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGT...GCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174073.8
3UTR CAA 90 bp GCCAGCTTAGCTCCCTCCAGCTCCAGTTCCCCTGATGCTTGTTTTTaGAAGCCCGAATTGAGAACTGAATCTTTCCTTAGGCACATCTCA +
Preference number: 2 (lower is better)
Translates to: ASLAPSSSSSPDACF*KPELRTESFLRHIS
Trigger: TGAGATGTGCCTAAGGAAAGATTCAGTTCTCAATTCGGGCTTCAAAAAACAAGCATCAGGGGAACTGGAGCTGGAGGGAGCTAAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174073.8
3UTR-3UTR TCA 90 bp CCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCGAGATAGACATGATCTaGGAGATGAGAGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: PPISSPRTFPTISVKTMAEIDMI*EMREAS
Trigger: GCTGGCCTCTCTCATCTCTCAGATCATGTCTATCTC...GGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR TCA 90 bp GATGCACACGGTGATCCCTGTGATGGTGAGCACCATGCCAGCCACTGCTTCTTTAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: DAHGDPCDGEHHASHCFFKPEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...AAAGAAGCAGTGGCTGGCATGGTGCTCACCATCACAGGGATCACCGTGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000129515.8
ENSMUST00000151969.8
3UTR-3UTR GCA 90 bp TTGAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTCACAGAGATCCACCTaGCTCTGCCTCCTGAGTGAT +
Preference number: 2 (lower is better)
Translates to: LRQGFCVALALWRVCFLLSQRST*LCLLSD
Trigger: ATCACTCAGGAGGCAGAGGCAGGTGGATCTCTGTGA...CAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000152126.8
3UTR-3UTR TCA 90 bp AGACGATGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGAAACCAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: RRWPESCRWAQLTSDLLMKPEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGTTT...CATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000151969.8
3UTR-3UTR CCA 90 bp CATGCCAGCCACTGCTTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG +
Preference number: 2 (lower is better)
Translates to: HASHCFFPTNIFSKDLPNVALAL*RVCFLL
Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...GTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAAGCAGTGGCTGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR CCA 90 bp TGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAAGGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG +
Preference number: 2 (lower is better)
Translates to: WPESCRWAQLTSDLLMPKVALAL*RVCFLL
Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...CTTTGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
3UTR-3UTR CCA 90 bp ACCATGCCAGCCACTGCTTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAGTAGCCTTGGCACTATaGAGAGTATGTTTCTTATTG +
Preference number: 2 (lower is better)
Translates to: TMPATASFPPISSPRTFPVALAL*RVCFLL
Trigger: CAATAAGAAACATACTCTCCATAGTGCCAAGGCTAC...TGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAAGCAGTGGCTGGCATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR TCA 90 bp GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATCTCACAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: ASEFRVARDTQRNLEFLYLTEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTGTGAG...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127919.2
3UTR-3UTR TCA 90 bp CACTGCTTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTCAGATAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: HCFFPTNIFSKDLPNNQCQIEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTATCTG...ACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAAGCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173937.8
3UTR-3UTR TCA 90 bp ACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGCAGATAGAGGATAAATaGCTCTTCCAGGAACTTCTA +
Preference number: 2 (lower is better)
Translates to: TNIFSKDLPNNQCKDDGQQIEDK*LFQELL
Trigger: TAGAAGTTCCTGGAAGAGTCATTTATCCTCTATCTG...CTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173937.8
ENSMUST00000174073.8
3UTR CCA 72 bp GCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTaGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: ASTEHSRADGRG*PTQECDGWPWV
Trigger: GACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR GCA 72 bp TCCCTGGAGACGCGGGTGGGGCCCTATGTTTGCGCATaGCCAGGAGCGGCGCTGTCTGAAGACTCACTGCGC +
Preference number: 3 (lower is better)
Translates to: SLETRVGPYVCA*PGAALSEDSLR
Trigger: GCGCAGTGAGTCTTCAGACAGCGCCGCTCCTGGGCATGCGCAAACATAGGGCCCCACCCGCGTCTCCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR GCA 72 bp AGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTaGGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTT +
Preference number: 3 (lower is better)
Translates to: SRADGRGWPTQE*DGWPWVLLTEL
Trigger: AAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CCA 72 bp CGGGGTTGGCCCACTCAGGAGTGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTTGTGATGCACACGGTG +
Preference number: 3 (lower is better)
Translates to: RGWPTQECDGWP*VLLTELVMHTV
Trigger: CACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CCA 72 bp GACGGTCGGGGTTGGCCCACTCAGGAGTGCGACGGTTaGCCCTGGGTCTTGCTCACCGAGCTTGTGATGCAC +
Preference number: 3 (lower is better)
Translates to: DGRGWPTQECDG*PWVLLTELVMH
Trigger: GTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAACCCCGACCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR CAA 90 bp TCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG +
Preference number: 3 (lower is better)
Translates to: SAYTLGPASTEHSRADGRHSAYT*GPASTE
Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...CCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR CAA 90 bp GAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG +
Preference number: 3 (lower is better)
Translates to: EASWPIILPTPWAQHPPSHSAYT*GPASTE
Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...GCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CCA 72 bp GCCCTGGCTGTCCTGGACTCACTCTGTAGACCAGGCTaGCCTGGAACTCAGAAATCCGCCTGCCTCTGCCTC +
Preference number: 3 (lower is better)
Translates to: ALAVLDSLCRPG*PGTQKSACLCL
Trigger: GAGGCAGAGGCAGGCGGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTGAGTCCAGGACAGCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000152126.8
3UTR-3UTR CAA 90 bp CCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGCATTTTGCCCAGGGCCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG +
Preference number: 3 (lower is better)
Translates to: PAHSCLLAGLTVEHFAQGHSAYT*GPASTE
Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...GCCCTGGGCAAAATGCTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
3UTR CCA 72 bp AGAGAGGCCAGCTGGCCAATCATTCTGCCTACACCTTaGGCCCAGCATCCACCGAGCACAGCAGAGCTGACG +
Preference number: 3 (lower is better)
Translates to: REASWPIILPTP*AQHPPSTAELT
Trigger: CGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR CAA 90 bp AGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCACATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG +
Preference number: 3 (lower is better)
Translates to: SWPIILPTPWAQHPPSTAHSAYT*GPASTE
Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...TGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR-3UTR CAA 90 bp GCAGCTAGGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGTCTGGCCATTCCTGGTaGAGACTGCAGCCAGCCCTT +
Preference number: 3 (lower is better)
Translates to: AARWCPAHSCLLAGLTVESGHSW*RLQPAL
Trigger: AAGGGCTGGCTGCAGTCTCAACCAGGAATGGCCAGA...CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
3UTR TCA 72 bp TTGCAGGTCGGGATGGAATTGCGAGTGCACCTGGGGTaGGGGGCTGGACCTTCCGGCGAAATGCTGTCACAT +
Preference number: 3 (lower is better)
Translates to: LQVGMELRVHLG*GAGPSGEMLSH
Trigger: ATGTGACAGCATTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR GCA 72 bp CATCTTACTCGCACGCCCCCGCACTGCACTGAAGAATaGGGAGCTCTGGCCGGGTTAGGGAAGAGAATGAGG +
Preference number: 3 (lower is better)
Translates to: HLTRTPPHCTEE*GALAGLGKRMR
Trigger: CCTCATTCTCTTCCCTAACCCGGCCAGAGCTCCGCATTCTTCAGTGCAGTGCGGGGGCGTGCGAGTAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR GCA 72 bp AGGTGTCTACATTGCAGGTCGGGATGGAATTGCGAGTaGACCTGGGGTGAGGGGCTGGACCTTCCGGCGAAA +
Preference number: 3 (lower is better)
Translates to: RCLHCRSGWNCE*TWGEGLDLPAK
Trigger: TTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAGACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp AAAGCTGCTGCTGGCCAGATGTTTGCTGCAGCTAGGTaGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTG +
Preference number: 3 (lower is better)
Translates to: KAAAGQMFAAAR*CPAHSCLLAGL
Trigger: CAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGCAGCAAACATCTGGCCAGCAGCAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
3UTR CCA 72 bp GAGGGTGACCTCAGCACTCTTCAGTGGACTGGGGGCTaGATCCCCAAGCCCGTATTTCTCCCAGAGGTACGA +
Preference number: 3 (lower is better)
Translates to: EGDLSTLQWTGG*IPKPVFLPEVR
Trigger: TCGTACCTCTGGGAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp CTACATTGCAGGTCGGGATGGAATTGCGAGTGCACCTaGGGTGAGGGGCTGGACCTTCCGGCGAAATGCTGT +
Preference number: 3 (lower is better)
Translates to: LHCRSGWNCECT*GEGLDLPAKCC
Trigger: ACAGCATTTCGCCGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR-3UTR CAA 90 bp GCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTGTGCTGCCCTTCGTCTaGTTTGTTTGTTTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: AYTLGPASTEHSRADGRGVLPFV*FVCFGF
Trigger: AAACCCAAAACAAACAAACAAGACGAAGGGCAGCAC...ACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000152126.8
3UTR-3UTR CAA 90 bp GCCCTGGGTCTTGCTCACCGAGCTTGTGATGCACACGGTGATCCCTGTGATGGTACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAAC +
Preference number: 3 (lower is better)
Translates to: ALGLAHRACDAHGDPCDGTMARE*QMGTAN
Trigger: GTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGT...ACCATCACAGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR TCA 72 bp GGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTaGCAGTTGAGCATTTTGCCCAGGGCCAGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: GGVRHTAVYLRG*QLSILPRASLF
Trigger: AAACAAGCTGGCCCTGGGCAAAATGCTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
3UTR TCA 72 bp CACATAACATCTTACTCGCACGCCCCCGCACTGCACTaGAGAATGCGGAGCTCTGGCCGGGTTAGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: HITSYSHAPALH*RMRSSGRVREE
Trigger: CTCTTCCCTAACCCGGCCAGAGCTCCGCATTCTTCAGTGCAGTGCGGGGGCGTGCGAGTAAGATGTTATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR GCA 72 bp TTCGAAAGGTGTCTACATTGCAGGTCGGGATGGAATTaGGAGTGCACCTGGGGTGAGGGGCTGGACCTTCCG +
Preference number: 3 (lower is better)
Translates to: FERCLHCRSGWN*ECTWGEGLDLP
Trigger: CGGAAGGTCCAGCCCCTCACCCCAGGTGCACTCGCAATTCCATCCCGACCTGCAATGTAGACACCTTTCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp GAGTCCCTGTTCTGGCTTGCACCTTCCCACGGGGGTTaGCATGGTTACAAATGCTCAGGGACCGCTCATGTG +
Preference number: 3 (lower is better)
Translates to: ESLFWLAPSHGG*HGYKCSGTAHV
Trigger: CACATGAGCGGTCCCTGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129515.8
ENSMUST00000172774.8
3UTR TCA 72 bp GTAATGGAGCTGTGGAGGCTTCTGGCCATTCCTGGTTaGGACTGCAGCCAGCCCTTTCCATGTAATGGAGGC +
Preference number: 3 (lower is better)
Translates to: VMELWRLLAIPG*DCSQPFPCNGG
Trigger: GCCTCCATTACATGGAAAGGGCTGGCTGCAGTCTCAACCAGGAATGGCCAGAAGCCTCCACAGCTCCATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
3UTR CCA 72 bp GTACAAGAGATTGAGGGTGACCTCAGCACTCTTCAGTaGACTGGGGGCTGGATCCCCAAGCCCGTATTTCTC +
Preference number: 3 (lower is better)
Translates to: VQEIEGDLSTLQ*TGGWIPKPVFL
Trigger: GAGAAATACGGGCTTGGGGATCCAGCCCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp CTTGTTCTCTACATTAGGCCGGCTTCCGAGGCTTCTTaGTCCGACGTCAATTCCAGAGCCTTCGAGCCGAGT +
Preference number: 3 (lower is better)
Translates to: LVLYIRPASEAS*SDVNSRAFEPS
Trigger: ACTCGGCTCGAAGGCTCTGGAATTGACGTCGGACCAAGAAGCCTCGGAAGCCGGCCTAATGTAGAGAACAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR-3UTR CAA 90 bp TCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAG +
Preference number: 3 (lower is better)
Translates to: SPRTFPTISVKTMARELQHSAYT*GPASTE
Trigger: CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATG...CTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR GCA 72 bp TGCAAAGATCTCTCTCTTTTGGGCTCAGAGGTCGAGTaGTTGCCCACCATGTGCAAGGGCTTGGCAACGACA +
Preference number: 3 (lower is better)
Translates to: CKDLSLLGSEVE*LPTMCKGLATT
Trigger: TGTCGTTGCCAAGCCCTTGCACATGGTGGGCAAGCACTCGACCTCTGAGCCCAAAAGAGAGAGATCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp TCACAGTCCTTGACTGACACAGACAGAAGCTACACTTaGCAGAGAATGCTGAGCCTGAGGACCAGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: SQSLTDTDRSYT*QRMLSLRTSQL
Trigger: CAGCTGGCTGGTCCTCAGGCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR-3UTR CAA 90 bp CAGTCCTTGACTGACACAGACAGAAGCTACACTTGGCAGAGAATGCTGAGCCTGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAAC +
Preference number: 3 (lower is better)
Translates to: QSLTDTDRSYTWQRMLSLTMARE*QMGTAN
Trigger: GTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGT...CAGGCTCAGCATTCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR TCA 72 bp GCATGGTTACAAATGCTCAGGGACCGCTCATGTGTTTaGAGACCCCTTAAGAGTAGTCCTGGAGCCTGGCAG +
Preference number: 3 (lower is better)
Translates to: AWLQMLRDRSCV*RPLKSSPGAWQ
Trigger: CTGCCAGGCTCCAGGACTACTCTTAAGGGGTCTTCAAACACATGAGCGGTCCCTGAGCATTTGTAACCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000129515.8
3UTR GCA 72 bp GCTGCCGCTTCCATCAGGTCTCTTACTGGGTCACACTaGTGCTTTCCCACCAATATCTTCTCCAAGGACCTT +
Preference number: 3 (lower is better)
Translates to: AAASIRSLTGSH*CFPTNIFSKDL
Trigger: AAGGTCCTTGGAGAAGATATTGGTGGGAAAGCAGCAGTGTGACCCAGTAAGAGACCTGATGGAAGCGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174073.8
3UTR-3UTR CAA 90 bp GTTGTGCCCTGGTGTGGTGGTCCTGAACACACACACACACACCTGTACAGTGTGGGTCGGGGGCACTGGTaGGAATTAAACAAACAGAAA +
Preference number: 3 (lower is better)
Translates to: VVPWCGGPEHTHTHLYSVGRGHW*ELNKQK
Trigger: TTTCTGTTTGTTTAATTCCAACCAGTGCCCCCGACC...CACACTGTACAGGTGTGTGTGTGTGTGTTCAGGACCACCACACCAGGGCACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp CAGAGGTCGAGTGCTTGCCCACCATGTGCAAGGGCTTaGCAACGACAAAATCAAGAGTGCTTGCCAAAATAC +
Preference number: 3 (lower is better)
Translates to: QRSSACPPCARA*QRQNQECLPKY
Trigger: GTATTTTGGCAAGCACTCTTGATTTTGTCGTTGCCAAGCCCTTGCACATGGTGGGCAAGCACTCGACCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp GTGGTCCTGAACACACACACACACACCTGTACAGTGTaGGAAGACGTGGATACACAGGTCCAAAGTGTCACA +
Preference number: 3 (lower is better)
Translates to: VVLNTHTHTCTV*EDVDTQVQSVT
Trigger: TGTGACACTTTGGACCTGTGTATCCACGTCTTCCCACACTGTACAGGTGTGTGTGTGTGTGTTCAGGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CCA 72 bp GGACCGCTCATGTGTTTGAAGACCCATAGGCAGCCATaGGCAGTTCTCGATAGCTTTCCTTATGTTCTACCC +
Preference number: 3 (lower is better)
Translates to: GPLMCLKTHRQP*AVLDSFPYVLP
Trigger: GGGTAGAACATAAGGAAAGCTATCGAGAACTGCCCATGGCTGCCTATGGGTCTTCAAACACATGAGCGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174610.2
3UTR TCA 72 bp CCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTAATAGGCAGCCATGG +
Preference number: 3 (lower is better)
Translates to: PKSSSREGIHSD*GERASGNRQPW
Trigger: CCATGGCTGCCTATTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135628.8
ENSMUST00000145345.2
3UTR TCA 72 bp CCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTC +
Preference number: 3 (lower is better)
Translates to: PKSSSREGIHSD*GERASGTSSRV
Trigger: GACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000150110.8
ENSMUST00000172774.8
3UTR-3UTR CAA 90 bp AGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCGAAAGAAAGCTCAACTaGGTGATGATGACCTTAAGA +
Preference number: 3 (lower is better)
Translates to: RTFPTISVKTMARELQMGERKLN*VMMTLR
Trigger: TCTTAAGGTCATCATCACCAAGTTGAGCTTTCTTTC...GCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000135628.8
ENSMUST00000145345.2
3UTR-3UTR CAA 90 bp CAGCTAACGTCAGATCTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACGGACCGCTCATGTGTTaGAAGACCCAGAGGATAAAT +
Preference number: 3 (lower is better)
Translates to: QLTSDLLMPKSSSREGIHGPLMC*KTQRIN
Trigger: ATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCC...GTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAGATCTGACGTTAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172774.8
3UTR TCA 72 bp TGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTaGGATAGACATGATCTGAGAGATGAGAGAGGCCAG +
Preference number: 3 (lower is better)
Translates to: WHYGEYVSYCGP*DRHDLRDERGQ
Trigger: CTGGCCTCTCTCATCTCTCAGATCATGTCTATCTCAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR TCA 72 bp TCGATAGCTTTCCTTATGTTCTACCCCAGGGCAAGTTaGGCCGAAAGAAAGCTCAACTTGGTGATGATGACC +
Preference number: 3 (lower is better)
Translates to: SIAFLMFYPRAS*AERKLNLVMMT
Trigger: GGTCATCATCACCAAGTTGAGCTTTCTTTCGGCTCAACTTGCCCTGGGGTAGAACATAAGGAAAGCTATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000135628.8
ENSMUST00000145345.2
ENSMUST00000174610.2
3UTR TCA 72 bp GGGACCGCTCATGTGTTTGAAGACCCAGAGGATAAATaGCTCTTCCAGGAACTTCTAGTGAGTAAGAGATGG +
Preference number: 3 (lower is better)
Translates to: GTAHVFEDPEDK*LFQELLVSKRW
Trigger: CCATCTCTTACTCACTAGAAGTTCCTGGAAGAGTCATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172774.8
3UTR GCA 72 bp CCGTGGAACCCACTAAAGGTTACAAAACCTTCCCAGTaGTGCCCTTCGTCTTGTTTGTTTGTTTTGGGTTTT +
Preference number: 3 (lower is better)
Translates to: PWNPLKVTKPSQ*CPSSCLFVLGF
Trigger: AAAACCCAAAACAAACAAACAAGACGAAGGGCAGCACTGGGAAGGTTTTGTAACCTTTAGTGGGTTCCACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000152126.8
CDS-3UTR GCA 90 bp CCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: PWAQHPPSTAELTVGVGPRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...TGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LPTPWAQHPPSTAELTVGSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: AYTLGPASTEHSRADGRGRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...ACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCCCACTCAGGAGTTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QHPPSTAELTVGVGPLRSSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...ACTCCTGAGTGGGCCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp TGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: WPTQECDGWPWVLLTELVRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp TACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACGGTCGGGGTTGGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: YTLGPASTEHSRADGRGWRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CCAACCCCGACCGTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp TTGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTTGCTCACCGAGCTTGTCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: LAHSGVRRLALGLAHRACRATPQ*GHQHQS
Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...ACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EASWPIILPTPWAQHPPSSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GCAGCTAGGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: AARWCPAHSCLLAGLTVERATPQ*GHQHQS
Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
CDS-3UTR GCA 90 bp GCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGQSFCLHLGPSIHRAQQSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTGGCTTGCACCTTCCCACGGGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: GHQVPVRESLFWLAPSHGRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCTCGAACTGGTACCTGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000150110.8
ENSMUST00000172774.8
CDS-3UTR GCA 90 bp CCTATGTTTGCGCATGCCCAGGAGCGGCGCTGTCTGAAGACTCACTGCGCAAACCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: PMFAHAQERRCLKTHCANRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...GTTTGCGCAGTGAGTCTTCAGACAGCGCCGCTCCTGGGCATGCGCAAACATAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
CDS-3UTR GCA 90 bp CTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGACGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: LANHSAYTLGPASTEHSRRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...TCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR CCA 90 bp AGAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCAGGAGTGCGACGGTTaGCCCTGGGTCTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: RGQLANHSAYTLGPASTEQECDG*PWVLLT
Trigger: GGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTG...CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
3UTR CAA 72 bp TGGCCCACTCAGGAGTGCGACGGTTGGCCCTGGGTCTaGCTCACCGAGCTTGTGATGCACACGGTGATCCCT +
Preference number: 4 (lower is better)
Translates to: WPTQECDGWPWV*LTELVMHTVIP
Trigger: AGGGATCACCGTGTGCATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCACTCCTGAGTGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CTTGGTGATGATGACCTTAAGAGTAGTCCTGGAGCCTGGCAGTGGTGGCGCCTTCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: LGDDDLKSSPGAWQWWRLRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...AAGGCGCCACCACTGCCAGGCTCCAGGACTACTCTTAAGGTCATCATCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000135628.8
ENSMUST00000145345.2
ENSMUST00000174610.2
3UTR CAA 72 bp GAGAGAGGCCAGCTGGCCAATCATTCTGCCTACACCTaGGGCCCAGCATCCACCGAGCACAGCAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ERGQLANHSAYT*GPASTEHSRAD
Trigger: GTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CGATGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCATCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RWPESCRWAQLTSDLLMPSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...TGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
CDS-3UTR GCA 90 bp TCCCAGCACTCAGGAGTCAGATGCAGGCTGATCTCTGAATTCGAGGCTAGTGAGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SQHSGVRCRLISEFEASESAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CTCACTAGCCTCGAATTCAGAGATCAGCCTGCATCTGACTCCTGAGTGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000174610.2
CDS-3UTR GCA 90 bp ACTCTGATTGAGGAGAAAGGGCATCAGGTACCAGTTCGAGAGTCCCTGTTCTGGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: TLIEEKGHQVPVRESLFWSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CCAGAACAGGGACTCTCGAACTGGTACCTGATGCCCTTTCTCCTCAATCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000129515.8
ENSMUST00000150110.8
ENSMUST00000172774.8
CDS-3UTR GCA 90 bp ACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCACATCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: TFPTISVKTMARELQMGTSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...TGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGGGTGACCTCAGCACTCTTCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: EPSMRQLYKRLRVTSALFSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
CDS-3UTR GCA 90 bp TGTAACTTCTGTCCCCAAATCCCACCTTCAGCCAGCCAAAGCACTGTAATGGAGCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: CNFCPQIPPSASQSTVMERFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...CTCCATTACAGTGCTTTGGCTGGCTGAAGGTGGGATTTGGGGACAGAAGTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000152126.8
CDS-3UTR GCA 90 bp GCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ANHSAYTLGPASTEHSRARAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...AGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR TCA 90 bp GCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGT +
Preference number: 4 (lower is better)
Translates to: ANHSAYTLGPASTEHSRAGIHSD*GERASG
Trigger: ACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCC...AGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
CDS-3UTR GCA 90 bp TCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: SKDLPNNQCKDDGQRVADRATPQ*GHQHQS
Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...ATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CGTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATTGAGCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: RQFQSLRAEYEAIVQEIERATPQ*GHQHQS
Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...CTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
CDS-3UTR GCA 90 bp AGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAAGTCAAGTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RELQMGTANVRSVDAKVKSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...CTTGACTTTGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
CDS-3UTR GCA 90 bp CCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PTNIFSKDLPNNQCKDDGSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: PPISSPRTFPTISVKTMASAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...GGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CACACGGTGATCCCTGTGATGGTGAGCACCATGCCAGCCACTGCTTCTTTCCCAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: HTVIPVMVSTMPATASFPRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TGGGAAAGAAGCAGTGGCTGGCATGGTGCTCACCATCACAGGGATCACCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR CCA 90 bp GCAGCTAGGTGGTGTCCGGCACACAGCTGTCTACTTGCGGGGCTGACAGTTGAGCCAGAGAGTTGCAGATaGGCACAGCTAACGTCAGAT +
Preference number: 4 (lower is better)
Translates to: AARWCPAHSCLLAGLTVEPESCR*AQLTSD
Trigger: ATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGG...CTCAACTGTCAGCCCCGCAAGTAGACAGCTGTGTGCCGGACACCACCTAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
3UTR CAA 72 bp AGAGTCCCTGTTCTGGCTTGCACCTTCCCACGGGGGTaGGCATGGTTACAAATGCTCAGGGACCGCTCATGT +
Preference number: 4 (lower is better)
Translates to: RVPVLACTFPRG*AWLQMLRDRSC
Trigger: ACATGAGCGGTCCCTGAGCATTTGTAACCATGCCAACCCCCGTGGGAAGGTGCAAGCCAGAACAGGGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000129515.8
ENSMUST00000172774.8
CDS-3UTR GCA 90 bp ATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: IFSKDLPNNQCKDDGQRVRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...AACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTCACCATGCCAGCCACTaGTTCTTTCCCACCAATATC +
Preference number: 4 (lower is better)
Translates to: ANHSAYTLGPASTEHSRAHHASH*FFPTNI
Trigger: GATATTGGTGGGAAAGAAGCAGTGGCTGGCATGGTG...AGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
CDS-3UTR TCA 90 bp AATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGCACAGCAGAGCTGACAGAAGGGATCCACTCTaGTTGAGGAGAAAGGGCATC +
Preference number: 4 (lower is better)
Translates to: NHSAYTLGPASTEHSRADRRDPL*LRRKGI
Trigger: GATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCT...GTCAGCTCTGCTGTGCTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
CDS-3UTR GCA 90 bp GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: ASEFRVARDTQRNLEFLYRATPQ*GHQHQS
Trigger: GCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACG...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127919.2
CDS-3UTR GCA 90 bp GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATTCAGCAGCGGCTGCGTaGCACCCCACAGTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: ASEFRVARDTQRNLEFLYSAAAA*HPTVRP
Trigger: TGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGA...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127919.2
CDS-3UTR GCA 90 bp GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: ASEFRVARDTQRNLEFLYRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127919.2
CDS-3UTR GCA 90 bp AATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGACGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: NIFSKDLPNNQCKDDGQRRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...TCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CGATGGCCAGAGAGTTGCAGATGGGCACAGCTAACGTCAGATCTGTTGATGCCAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RWPESCRWAQLTSDLLMPRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TGGCATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
CDS-3UTR GCA 90 bp TCATCTCCAGCCAGCTTAGCTCCCTCCAGCTCCAGTTCCCCTGATGCTTGTTTTAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSPASLAPSSSSSPDACFRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...AAAACAAGCATCAGGGGAACTGGAGCTGGAGGGAGCTAAGCTGGCTGGAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174073.8
CDS-3UTR GCA 90 bp AATGCTCAGGGACCGCTCATGTGTTTGAAGACCCATAGGCAGCCATGGGCAGTTAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: NAQGPLMCLKTHRQPWAVRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...AACTGCCCATGGCTGCCTATGGGTCTTCAAACACATGAGCGGTCCCTGAGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174610.2
3UTR CAA 72 bp GCCTTCGAGCCGAGTATGAGGCAATTGTACAAGAGATaGAGGGTGACCTCAGCACTCTTCAGTGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: AFEPSMRQLYKR*RVTSALFSGLG
Trigger: CCCCAGTCCACTGAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
CDS-3UTR GCA 90 bp TTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATCGCTTCAGCAGCGGCTaGGTGCCACCCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: FPTNIFSKDLPNNQCKDDRFSSG*VPPHSA
Trigger: CGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCG...ATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCACAGCAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LPNNQCKDDGQRVADGHSRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...GCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp AGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGCAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RTFPTISVKTMARELQMGRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...GCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp AAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAGATGGGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KDLPNNQCKDDGQRVADGRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...CCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR CCA 90 bp CTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTGAGATATGCGACGGTTGGCCCTaGGTCTTGCTCACCGAGCTT +
Preference number: 4 (lower is better)
Translates to: LCSLGTMESMFLIVAPEICDGWP*VLLTEL
Trigger: AAGCTCGGTGAGCAAGACCCAGGGCCAACCGTCGCA...TATCTCAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
CDS-3UTR GCA 90 bp TTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTTGCAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FSKDLPNNQCKDDGQRVARAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp CTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTGAGATAAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LCSLGTMESMFLIVAPEIRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...TATCTCAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: EAGFLCSLGTMESMFLIVRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...CACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CAA 72 bp GTCAATTCCAGAGCCTTCGAGCCGAGTATGAGGCAATaGTACAAGAGATTGAGGGTGACCTCAGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: VNSRAFEPSMRQ*YKRLRVTSALF
Trigger: GAAGAGTGCTGAGGTCACCCTCAATCTCTTGTACAATTGCCTCATACTCGGCTCGAAGGCTCTGGAATTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CAA 72 bp TCAGAGGTCGAGTGCTTGCCCACCATGTGCAAGGGCTaGGCAACGACAAAATCAAGAGTGCTTGCCAAAATA +
Preference number: 4 (lower is better)
Translates to: SEVECLPTMCKG*ATTKSRVLAKI
Trigger: TATTTTGGCAAGCACTCTTGATTTTGTCGTTGCCAAGCCCTTGCACATGGTGGGCAAGCACTCGACCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
CDS-3UTR GCA 90 bp TTGAGGCAGGGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LRQGFCVALALWRVCFLLRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...CAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACCCTGCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000102591.10
ENSMUST00000129515.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000173937.8
ENSMUST00000174819.8
CDS-3UTR GCA 90 bp GCTAGTGAGTTCAGGGTAGCCAGGGATACACAGAGAAACCTTGAGTTCTTATATAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASEFRVARDTQRNLEFLYRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...ATATAAGAACTCAAGGTTTCTCTGTGTATCCCTGGCTACCCTGAACTCACTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000127919.2
3UTR CAA 72 bp AAGACGTGGATACACAGGTCCAAAGTGTCACAGTCCTaGACTGACACAGACAGAAGCTACACTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: KTWIHRSKVSQS*TDTDRSYTWQR
Trigger: TCTCTGCCAAGTGTAGCTTCTGTCTGTGTCAGTCAAGGACTGTGACACTTTGGACCTGTGTATCCACGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137090.8
3UTR CAA 72 bp GGCATGGTTACAAATGCTCAGGGACCGCTCATGTGTTaGAAGACCCAGAGGATAAATGACTCTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GMVTNAQGPLMC*KTQRINDSSRN
Trigger: GTTCCTGGAAGAGTCATTTATCCTCTGGGTCTTCAAACACATGAGCGGTCCCTGAGCATTTGTAACCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172774.8
CDS-3UTR GCA 90 bp TTCTTTCCCACCAATATCTTCTCCAAGGACCTTCCCAACAATCAGTGTAAAGACAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FFPTNIFSKDLPNNQCKDRAFIS*NSCQAH
Trigger: GTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCT...GTCTTTACACTGATTGTTGGGAAGGTCCTTGGAGAAGATATTGGTGGGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129515.8
ENSMUST00000145345.2
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174819.8
3UTR CAA 72 bp CTCGATAGCTTTCCTTATGTTCTACCCCAGGGCAAGTaGAGCCGAAAGAAAGCTCAACTTGGTGATGATGAC +
Preference number: 4 (lower is better)
Translates to: LDSFPYVLPQGK*SRKKAQLGDDD
Trigger: GTCATCATCACCAAGTTGAGCTTTCTTTCGGCTCAACTTGCCCTGGGGTAGAACATAAGGAAAGCTATCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000135628.8
ENSMUST00000145345.2
ENSMUST00000174610.2
3UTR CAA 72 bp TTCCCAACAATCAGTGTAAAGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAACGTCAGATCTGTTGAT +
Preference number: 4 (lower is better)
Translates to: FPTISVKTMARE*QMGTANVRSVD
Trigger: ATCAACAGATCTGACGTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGTCTTTACACTGATTGTTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
CDS GCA 90 bp GCCGGAGGAGGCTCGCTTCAGCAGCGGCTGCGTGCCACCCCACAGTaGGGCCACCAGCACCAGAGCAAGCACCTGCCCCCAGGACGCCGC +
Preference number: 5 (lower is better)
Translates to: AGGGSLQQRLRATPQ*GHQHQSKHLPPGRR
Trigger: GCGGCGTCCTGGGGGCAGGTGCTTGCTCTGGTGCTGGTGGCCGCACTGTGGGGTGGCACGCAGCCGCTGCTGAAGCGAGCCTCCTCCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000102591.10
ENSMUST00000127919.2
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173758.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174819.8
ENSMUST00000181579.8
CDS GCA 90 bp TTTATCTCCTGCAACAGCTGCCAGGCCCACGTCCGCTCACGCACTTaGTCCAGGCCGGAGGAGGCTCGCTTCAGCAGCGGCTGCGTGCCA +
Preference number: 5 (lower is better)
Translates to: FISCNSCQAHVRSRT*SRPEEARFSSGCVP
Trigger: TGGCACGCAGCCGCTGCTGAAGCGAGCCTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000102591.10
ENSMUST00000127919.2
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173758.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174610.2
ENSMUST00000174819.8
ENSMUST00000181579.8
CDS GCA 90 bp CGCACCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGGCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RTSVFPKRAFISCNS*QAHVRSRTCSRPEE
Trigger: CTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000127919.2
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174610.2
CDS GCA 90 bp GACCCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGGCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: DPSVFPKRAFISCNS*QAHVRSRTCSRPEE
Trigger: CTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150110.8
CDS-3UTR CAA 90 bp AGAGGCCAGCTGGCCAATCATTCTGCCTACACCTTGGGCCCAGCATCCACCGAGGGTTGGCCCTGGGTCTaGCTCACCGAGCTTGTGATG +
Preference number: 5 (lower is better)
Translates to: RGQLANHSAYTLGPASTEGWPWV*LTELVM
Trigger: CATCACAAGCTCGGTGAGCAAGACCCAGGGCCAACC...CTCGGTGGATGCTGGGCCCAAGGTGTAGGCAGAATGATTGGCCAGCTGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
CDS GCA 90 bp AAACCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGGCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KPSVFPKRAFISCNS*QAHVRSRTCSRPEE
Trigger: CTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145345.2
CDS GCA 90 bp AGAGCTAGACGCACCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACTTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RARRTSVFPKRAFIS*NSCQAHVRSRTCSR
Trigger: CCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGTGCGTCTAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000127919.2
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174610.2
CDS GCA 90 bp GTGTTTGAAGACCCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACTTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VFEDPSVFPKRAFIS*NSCQAHVRSRTCSR
Trigger: CCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGGTCTTCAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150110.8
CDS-3UTR CAA 90 bp GGTTTCTGTGTAGCCTTGGCACTATGGAGAGTATGTTTCTTATTGTGGCCCCTGACGATGGCCAGAGAGTaGCAGATGGGCACAGCTAAC +
Preference number: 5 (lower is better)
Translates to: GFCVALALWRVCFLLWPLTMARE*QMGTAN
Trigger: GTTAGCTGTGCCCATCTGCAACTCTCTGGCCATCGT...CAGGGGCCACAATAAGAAACATACTCTCCATAGTGCCAAGGCTACACAGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102591.10
CDS TCA 90 bp CTGTTGATGCCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACTCAGTATTCCCGAAGAGAGCCT +
Preference number: 5 (lower is better)
Translates to: LLMPKSSSREGIHSD*GERASGTQYSRREP
Trigger: AGGCTCTCTTCGGGAATACTGAGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGGCATCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000181579.8
CDS CAA 90 bp CTTTATCTCCTGCAACAGCTGCCAGGCCCACGTCCGCTCACGCACTaGCTCCAGGCCGGAGGAGGCTCGCTTCAGCAGCGGCTGCGTGCC +
Preference number: 6 (lower is better)
Translates to: LYLLQQLPGPRPLTH*LQAGGGSLQQRLRA
Trigger: GGCACGCAGCCGCTGCTGAAGCGAGCCTCCTCCGGCCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000102591.10
ENSMUST00000127919.2
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173758.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174610.2
ENSMUST00000174819.8
ENSMUST00000181579.8
CDS GCA 72 bp GTATTCCCGAAGAGAGCCTTTATCTCCTGCAACAGCTaGCAGGCCCACGTCCGCTCACGCACTTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VFPKRAFISCNS*QAHVRSRTCSR
Trigger: CCTGGAGCAAGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000102591.10
ENSMUST00000127919.2
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000145345.2
ENSMUST00000150110.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173758.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174610.2
ENSMUST00000174819.8
ENSMUST00000181579.8
CDS GCA 72 bp CGCACCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACT +
Preference number: 6 (lower is better)
Translates to: RTSVFPKRAFIS*NSCQAHVRSRT
Trigger: AGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000127919.2
ENSMUST00000129515.8
ENSMUST00000135628.8
ENSMUST00000137090.8
ENSMUST00000151969.8
ENSMUST00000152126.8
ENSMUST00000172774.8
ENSMUST00000173937.8
ENSMUST00000174073.8
ENSMUST00000174610.2
CDS GCA 72 bp GACCCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACT +
Preference number: 6 (lower is better)
Translates to: DPSVFPKRAFIS*NSCQAHVRSRT
Trigger: AGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150110.8
CDS GCA 72 bp AAACCCTCAGTATTCCCGAAGAGAGCCTTTATCTCCTaGAACAGCTGCCAGGCCCACGTCCGCTCACGCACT +
Preference number: 6 (lower is better)
Translates to: KPSVFPKRAFIS*NSCQAHVRSRT
Trigger: AGTGCGTGAGCGGACGTGGGCCTGGCAGCTGTTGCAGGAGATAAAGGCTCTCTTCGGGAATACTGAGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000145345.2
CDS TCA 72 bp CCAAAGTCAAGTAGTAGAGAAGGGATCCACTCTGATTaGGGAGAAAGGGCATCAGGTACTCAGTATTCCCGA +
Preference number: 6 (lower is better)
Translates to: PKSSSREGIHSD*GERASGTQYSR
Trigger: TCGGGAATACTGAGTACCTGATGCCCTTTCTCCTCAATCAGAGTGGATCCCTTCTCTACTACTTGACTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102591.10
ENSMUST00000181579.8