Pregenerated sensors for TMEM231 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031951Ensembl transcript IDs: ENSMUST00000034429.9, ENSMUST00000211866.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCTGAAAGTGTCCGGTGGGCTCTTCGCAGAAATGTTGTAAGATaGCAGGTCTCAGAAGACAGGAATGAGGTAGCCGCGGTCCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: RPESVRWALRRNVVR*QVSEDRNEVAAVPR Trigger: CCGAGGGACCGCGGCTACCTCATTCCTGTCTTCTGAGACCTGCCATCTTACAACATTTCTGCGAAGAGCCCACCGGACACTTTCAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR GCA 90 bp | CACCCTGAGACCTTTCCACAAACTAGTGTTTGTGGGTTCCCTCGGTaGTTTGAAGGCGTGGATTTTGTGCAGTCCAGCCCTGGAAAAACC | + |
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Preference number: 1 (lower is better) Translates to: HPETFPQTSVCGFPR*FEGVDFVQSSPGKT Trigger: GGTTTTTCCAGGGCTGGACTGCACAAAATCCACGCCTTCAAAGCACCGAGGGAACCCACAAACACTAGTTTGTGGAAAGGTCTCAGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR GCA 90 bp | CTCAAGGATGATCCTGAATTTCTCTGCTCCTGCCTCCACCCACAATaGACCGGGGTTATAGGCTTGCACCACCATAAAGGTTTATGTGTA | + |
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Preference number: 1 (lower is better) Translates to: LKDDPEFLCSCLHPQ*TGVIGLHHHKGLCV Trigger: TACACATAAACCTTTATGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGAAATTCAGGATCATCCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTTGCACCACCAGGCCAGGCTGTTGGGTaGGAGCCAGGGAGAAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: SLLLPPPTMHRGYRLAPPGQAVG*EPGRKN Trigger: GTTCTTTCTCCCTGGCTCTCACCCAACAGCCTGGCC...TGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTATCTTCTCAGGATAAGTGCTCTTTCCGTATCTCTCCCTGGGGCACGGCTACTCAGAAGACAGGAATaGGGTAGCCGCGGTCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: GYLLRISALSVSLPGARLLRRQE*GSRGPS Trigger: CGAGGGACCGCGGCTACCTCATTCCTGTCTTCTGAG...TAGCCGTGCCCCAGGGAGAGATACGGAAAGAGCACTTATCCTGAGAAGATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCCTGACGGGGTATCTTCTCAGGATAAGTGCTCTTTCCGTATCTCTCCCTGGCTTGCGTGTTTCTTGTaGGAGCCCCTGGGGAGGCTA | + |
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Preference number: 2 (lower is better) Translates to: APDGVSSQDKCSFRISPWLACFL*EPLGRL Trigger: TAGCCTCCCCAGGGGCTCTCACAAGAAACACGCAAG...CCAGGGAGAGATACGGAAAGAGCACTTATCCTGAGAAGATACCCCGTCAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGGGTAGGCGGACGGACTaGATGAAGCAGGCGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVGRRTD*MKQALL Trigger: CAGAAGCGCCTGCTTCATTCAGTCCGTCCGCCTACC...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTCCTCACCCTCCTCATaGCTTCCCCCAGAGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKSSPSS*LPPEPP Trigger: GGGAGGCTCTGGGGGAAGGCATGAGGAGGGTGAGGA...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGGAGCTTCAGCGGCTCTaGCCACCAGCCAGATCGGGT | + |
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Preference number: 2 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKELQRL*PPARSG Trigger: ACCCGATCTGGCTGGTGGGCAGAGCCGCTGAAGCTC...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGCTCAGAAGACAGGAATaGGGTAGCCGCGGTCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKLRRQE*GSRGPS Trigger: CGAGGGACCGCGGCTACCTCATTCCTGTCTTCTGAG...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGGAGTGGCCAGGCTGTTaGGTGAGAGCCAGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVEWPGC*VRAREK Trigger: TTTCTCCCTGGCTCTCACCCAACAGCCTGGCCACTC...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTGTGCCGAGTGGCCAGGCTGTTaGGTGAGAGCCAGGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: HHKGLCVAGDGTQGSKCAEWPGC*VRAREK Trigger: TTTCTCCCTGGCTCTCACCCAACAGCCTGGCCACTC...GGCACACTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGGCCATCAAGGAGGAGTaGCCAGGCTGTTGGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVAIKEE*PGCWVR Trigger: TCTCACCCAACAGCCTGGCCACTCCTCCTTGATGGC...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGGGCTCCAAGTGTGCCAGGCAAGCGCTCTTCCAACTGAGCCACATCTCGATTACAGGGCTATCTaGCTAGGCTTCTTGTCACTC | + |
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Preference number: 2 (lower is better) Translates to: NTGLQVCQASALPTEPHLDYRAI*LGFLSL Trigger: GAGTGACAAGAAGCCTAGCCAGATAGCCCTGTAATC...GAGATGTGGCTCAGTTGGAAGAGCGCTTGCCTGGCACACTTGGAGCCCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR CAA 90 bp | TTTCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTaGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAG | + |
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Preference number: 2 (lower is better) Translates to: FLCSCLHPQCTGVIG*HHHKGLCVAGDGTQ Trigger: CTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGGGCAGTGGAAGCCAATaGCAACAACAACCCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVGSGSQ*QQQPLC Trigger: ACAGAGGGGTTGTTGTTGGCATTGGCTTCCACTGCC...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGGGCAGTGGAAGCCAATaGCAACAACAACCCCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKGSGSQ*QQQPLC Trigger: ACAGAGGGGTTGTTGTTGGCATTGGCTTCCACTGCC...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | CACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTGTGCCGAACTGCAAAACAACTaGGTTTTCAGCTCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: HHKGLCVAGDGTQGSKCAELQNN*VFSSAS Trigger: GGAGGCTGAGCTGAAAACTCAGTTGTTTTGCAGTTC...GGCACACTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTCTTTGTAGATACATACCTCTATAGATTACAGGGCTATCTGGCTAGGCTTTCCTCACCCTCCTCATaGCTTCCCCCAGAGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: DVFVDTYLYRLQGYLARLSSPSS*LPPEPP Trigger: GGGAGGCTCTGGGGGAAGGCATGAGGAGGGTGAGGA...AAGCCTAGCCAGATAGCCCTGTAATCTATAGAGGTATGTATCTACAAAGACATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTATCTTCTCAGGATAAGTGCTCTTTCCGTATCTCTCCCTGGGGCACGGCTAAGAAAGGCCATGCTCTaGATCTCGAATGTTGACATC | + |
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Preference number: 2 (lower is better) Translates to: GYLLRISALSVSLPGARLRKAML*ISNVDI Trigger: GATGTCAACATTCGAGATGCAGAGCATGGCCTTTCT...TAGCCGTGCCCCAGGGAGAGATACGGAAAGAGCACTTATCCTGAGAAGATACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAGGTAGGCGGACGGACTaGATGAAGCAGGCGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: ASALPTEPHLITFLKLKSGRRTD*MKQALL Trigger: CAGAAGCGCCTGCTTCATTCAGTCCGTCCGCCTACC...TGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGAAGGCGTGGATTTTGTaGAGTCCAGCCCTGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKKAWIL*SPALEK Trigger: TTTTTCCAGGGCTGGACTGCACAAAATCCACGCCTT...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTTGCACCACCACTTAATCAAGGGAACTaGAAAACAACTGAGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLLLPPPTMHRGYRLAPPLNQGN*KTTEFS Trigger: TGAAAACTCAGTTGTTTTGCAGTTCCCTTGATTAAG...TGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAGCCACGGTAGCTCAGTaGCTGCTTCTGTTGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ASALPTEPHLITFLKLKSATVAQ*LLLLQP Trigger: AGGCTGCAACAGAAGCAGCCACTGAGCTACCGTGGC...TGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGAGAAATGTTGTAAGATaGCAGGTCTCAGAAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKRNVVR*QVSEDR Trigger: CCTGTCTTCTGAGACCTGCCATCTTACAACATTTCT...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | AGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAGAGTGGAGGCATGGGGGATaGGGTAGGGAAGTCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SALPTEPHLITFLKLKSEWRHGG*GREVLS Trigger: TGAAAGGACTTCCCTACCCCATCCCCCATGCCTCCA...CTCTGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | AGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAGAGGAATTTCTCTGCTCCTaGCTCCACCCACAATGCACC | + |
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Preference number: 2 (lower is better) Translates to: SALPTEPHLITFLKLKSEEFLCS*LHPQCT Trigger: GGTGCATTGTGGGTGGAGGCAGGAGCAGAGAAATTC...CTCTGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | GATGTCTTTGTAGATACATACCTCTATAGATTACAGGGCTATCTGGCTAGGCTTGAACTGCAAAACAACTaGGTTTTCAGCTCAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: DVFVDTYLYRLQGYLARLELQNN*VFSSAS Trigger: GGAGGCTGAGCTGAAAACTCAGTTGTTTTGCAGTTC...AAGCCTAGCCAGATAGCCCTGTAATCTATAGAGGTATGTATCTACAAAGACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAAAGGCGTGGATTTTGTaGAGTCCAGCCCTGGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: ASALPTEPHLITFLKLKSKAWIL*SPALEK Trigger: TTTTTCCAGGGCTGGACTGCACAAAATCCACGCCTT...TGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCACATCTCCCAGAACCCTaGCTGGTAAGAAATGACTTC | + |
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Preference number: 2 (lower is better) Translates to: ASALPTEPHLITFLKLKSHLPEP*LVRNDF Trigger: GAAGTCATTTCTTACCAGCCAGGGTTCTGGGAGATG...TGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | AGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAGAGAAAAACCGTTGTCTCTaGAGTGAAACATGCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SALPTEPHLITFLKLKSEKNRCL*SETCRP Trigger: AGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTT...CTCTGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR TCA 90 bp | GATGTCTTTGTAGATACATACCTCTATAGATTACAGGGCTATCTGGCTAGGCTTAAAAACCGTTGTCTCTaGAGTGAAACATGCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DVFVDTYLYRLQGYLARLKNRCL*SETCRP Trigger: AGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTT...AAGCCTAGCCAGATAGCCCTGTAATCTATAGAGGTATGTATCTACAAAGACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR TCA 72 bp | CCTCCCCTGGTGCAGGGAGGGGGTAGGCGGACGGACTaGATGAAGCAGGCGCTTCTGACTCCAGCCGCCATC | + |
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Preference number: 3 (lower is better) Translates to: PPLVQGGGRRTD*MKQALLTPAAI Trigger: GATGGCGGCTGGAGTCAGAAGCGCCTGCTTCATTCAGTCCGTCCGCCTACCCCCTCCCTGCACCAGGGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR TCA 72 bp | AGAGCCAGCCGCACCAGGAACAGAGGGCCGTTCAGCTaGGCTGATGACAGACCCCCACCTATTAGCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: RASRTRNRGPFS*ADDRPPPISLR Trigger: CCTCAGGCTAATAGGTGGGGGTCTGTCATCAGCTCAGCTGAACGGCCCTCTGTTCCTGGTGCGGCTGGCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR GCA 72 bp | ATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTGTaGCAGGCAAGCGCTCTTCCAACTGAGCCACATCTC | + |
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Preference number: 3 (lower is better) Translates to: MCSWGWNTGLQV*QASALPTEPHL Trigger: GAGATGTGGCTCAGTTGGAAGAGCGCTTGCCTGGCACACTTGGAGCCCTGTGTTCCATCCCCAGCTACACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR CCA 72 bp | AGTGTCCGGTGGGCTCTTCGCAGAAATGTTGTAAGATaGCAGGTCTCAGAAGACAGGAATGAGGTAGCCGCG | + |
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Preference number: 3 (lower is better) Translates to: SVRWALRRNVVR*QVSEDRNEVAA Trigger: CGCGGCTACCTCATTCCTGTCTTCTGAGACCTGCCATCTTACAACATTTCTGCGAAGAGCCCACCGGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CAA 90 bp | CACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTGTGCCCGTGGTGAGGAGTGTTaGTGGTTAGACCTGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: HHKGLCVAGDGTQGSKCARGEEC*WLDLEA Trigger: TGCCTCCAGGTCTAACCACAAACACTCCTCACCACG...GGCACACTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR GCA 72 bp | GATCCTGAATTTCTCTGCTCCTGCCTCCACCCACAATaGACCGGGGTTATAGGCTTGCACCACCATAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: DPEFLCSCLHPQ*TGVIGLHHHKG Trigger: ACCTTTATGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGAAATTCAGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR CCA 72 bp | TCTTCTCAGGATAAGTGCTCTTTCCGTATCTCTCCCTaGGGCACGGCTACAGGGATAGAGGTCACTACTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSQDKCSFRISP*GTATGIEVTTW Trigger: CCAAGTAGTGACCTCTATCCCTGTAGCCGTGCCCCAGGGAGAGATACGGAAAGAGCACTTATCCTGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR CAA 90 bp | AACACAGGGCTCCAAGTGTGCCAGGCAAGCGCTCTTCCAACTGAGCCACATCTCAAAGGACTTGTCCCATaGATCACGGACACGTTGTAT | + |
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Preference number: 3 (lower is better) Translates to: NTGLQVCQASALPTEPHLKGLVP*ITDTLY Trigger: ATACAACGTGTCCGTGATCAATGGGACAAGTCCTTT...GAGATGTGGCTCAGTTGGAAGAGCGCTTGCCTGGCACACTTGGAGCCCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAATGTTGTAAGATGGCAGGTCTCAGAAGACAGGAATGAGGTAGCCGCGGTCTGGATCCAGGCGAACTaGATCATCTCCCAGAACCCT | + |
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Preference number: 3 (lower is better) Translates to: RNVVRWQVSEDRNEVAAVWIQAN*IISQNP Trigger: AGGGTTCTGGGAGATGATCAAGTTCGCCTGGATCCA...GACCGCGGCTACCTCATTCCTGTCTTCTGAGACCTGCCATCTTACAACATTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR CAA 90 bp | AGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAGAGACCAGCCAGATCGGGTaGGGGTCACTGAGGACAGTG | + |
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Preference number: 3 (lower is better) Translates to: SALPTEPHLITFLKLKSETSQIG*GSLRTV Trigger: CACTGTCCTCAGTGACCCCAACCCGATCTGGCTGGT...CTCTGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCACGTGGTGAGGAGTGTTaGTGGTTAGACCTGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: ASALPTEPHLITFLKLKSRGEEC*WLDLEA Trigger: TGCCTCCAGGTCTAACCACAAACACTCCTCACCACG...TGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR TCA 72 bp | TCGCTTGACCGGAGGTGGGGCTCTTTCAAAGATGTATaGACTCACAGTAATTGTCTCCCTGAAATTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SLDRRWGSFKDV*THSNCLPEIQG Trigger: GCCTTGAATTTCAGGGAGACAATTACTGTGAGTTCATACATCTTTGAAAGAGCCCCACCTCCGGTCAAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTTCAAAATTCTTACTTaGCTCAGCCTGACAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKFKILT*LSLTEG Trigger: TCCTTCTGTCAGGCTGAGCAAAGTAAGAATTTTGAA...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| 3UTR-3UTR CAA 90 bp | GATGTCTTTGTAGATACATACCTCTATAGATTACAGGGCTATCTGGCTAGGCTTGGGAGAAAGAACCAGTaGTTAGAAGCCCACCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: DVFVDTYLYRLQGYLARLGRKNQ*LEAHHP Trigger: AGGATGGTGGGCTTCTAACAACTGGTTCTTTCTCCC...AAGCCTAGCCAGATAGCCCTGTAATCTATAGAGGTATGTATCTACAAAGACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR TCA 90 bp | TCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTTGCACCACCAAGCGGGACGCGCAGGTaGGCCCCCTGCAGCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLPPPTMHRGYRLAPPSGTRR*APCSRL Trigger: CAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCT...TGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR TCA 90 bp | GGGTATCTTCTCAGGATAAGTGCTCTTTCCGTATCTCTCCCTGGGGCACGGCTACCCCCTGCAGCCGGTTaGAGGTGGGGAACGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GYLLRISALSVSLPGARLPPAAG*RWGTCS Trigger: GGAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGG...TAGCCGTGCCCCAGGGAGAGATACGGAAAGAGCACTTATCCTGAGAAGATACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTTGCACCACCAGCCACGAGCAGCACTTaGTGCTGGAAGCGCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLPPPTMHRGYRLAPPATSST*CWKRTF Trigger: GAACGTGCGCTTCCAGCACCAAGTGCTGCTCGTGGC...TGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR GCA 90 bp | AACACAGGGCTCCAAGTGTGCCAGGCAAGCGCTCTTCCAACTGAGCCACATCTCACGAGCAGCACTTGGTaGTGGAAGCGCACGTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTGLQVCQASALPTEPHLTSSTW*WKRTFG Trigger: GCCGAACGTGCGCTTCCAGCACCAAGTGCTGCTCGT...GAGATGTGGCTCAGTTGGAAGAGCGCTTGCCTGGCACACTTGGAGCCCTGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTTGCACCACCAGCCACGGTAGCTCAGTaGCTGCTTCTGTTGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLLPPPTMHRGYRLAPPATVAQ*LLLLQP Trigger: AGGCTGCAACAGAAGCAGCCACTGAGCTACCGTGGC...TGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS-3UTR TCA 90 bp | AACACAGGGCTCCAAGTGTGCCAGGCAAGCGCTCTTCCAACTGAGCCACATCTCGCGCGCTCGATTGGGTaGGAGAAGAGATGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTGLQVCQASALPTEPHLARSIG*EKRWYS Trigger: GCTGTACCATCTCTTCTCTCACCCAATCGAGCGCGC...GAGATGTGGCTCAGTTGGAAGAGCGCTTGCCTGGCACACTTGGAGCCCTGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGGAGCTTCAGCGGCTCTaGCCACCAGCCAGATCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVELQRL*PPARSG Trigger: ACCCGATCTGGCTGGTGGGCAGAGCCGCTGAAGCTC...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGGCGCGCTCGATTGGGTaGGAGAAGAGATGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVARSIG*EKRWYS Trigger: GCTGTACCATCTCTTCTCTCACCCAATCGAGCGCGC...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAAAACCGTTGTCTCTGAAGTGAAACATGCAGGCCTGAAAGTGTCCGGTACGAGCAGCACTTGGTaGTGGAAGCGCACGTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGKTVVSEVKHAGLKVSGTSSTW*WKRTFG Trigger: GCCGAACGTGCGCTTCCAGCACCAAGTGCTGCTCGT...ACCGGACACTTTCAGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTTCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTTCAGCCAAAACCCGTaGCTCCGGAAGGCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKFSQNP*LRKATS Trigger: GCTGGTGGCCTTCCGGAGCCACGGGTTTTGGCTGAA...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAAAACCGTTGTCTCTGAAGTGAAACATGCAGGCCTGAAAGTGTCCGGTTTCAGCCAAAACCCGTaGCTCCGGAAGGCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGKTVVSEVKHAGLKVSGFSQNP*LRKATS Trigger: GCTGGTGGCCTTCCGGAGCCACGGGTTTTGGCTGAA...ACCGGACACTTTCAGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTTCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAAAAACCGTTGTCTCTGAAGTGAAACATGCAGGCCTGAAAGTGTCCGGTCCTGTCTCAGCTCTGTaGGGAGCAGATGGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGKTVVSEVKHAGLKVSGPVSAL*GADGTA Trigger: GGCTGTACCATCTGCTCCTCACAGAGCTGAGACAGG...ACCGGACACTTTCAGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTTCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAAAACCGTTGTCTCTGAAGTGAAACATGCAGGCCTGAAAGTGTCCGGTGCTGCTCCTCGTAGCTaGTCCGCTTCAGCCAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PGKTVVSEVKHAGLKVSGAAPRS*SASAKT Trigger: GGTTTTGGCTGAAGCGGAGCAGCTACGAGGAGCAGC...ACCGGACACTTTCAGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTTCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR TCA 90 bp | GATGTCTTTGTAGATACATACCTCTATAGATTACAGGGCTATCTGGCTAGGCTTCCCCCTGCAGCCGGTTaGAGGTGGGGAACGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVFVDTYLYRLQGYLARLPPAAG*RWGTCS Trigger: GGAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGG...AAGCCTAGCCAGATAGCCCTGTAATCTATAGAGGTATGTATCTACAAAGACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAAAACCGTTGTCTCTGAAGTGAAACATGCAGGCCTGAAAGTGTCCGGTCGAGGACATGCTCTGTaGGTTGCAGGGGAAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGKTVVSEVKHAGLKVSGRGHAL*VAGEVQ Trigger: TTGAACTTCCCCTGCAACCCACAGAGCATGTCCTCG...ACCGGACACTTTCAGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTTCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR CCA 90 bp | CACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGTGTGCCCATCTCCCAGAACCCTaGCTGGTAAGAAATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHKGLCVAGDGTQGSKCAHLPEP*LVRNDF Trigger: GAAGTCATTTCTTACCAGCCAGGGTTCTGGGAGATG...GGCACACTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS-3UTR GCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGACATGCTCTGTGGGTTaGAGGGGAAGTTCAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVTCSVG*RGSSSL Trigger: TAAACTTGAACTTCCCCTGCAACCCACAGAGCATGT...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR GCA 90 bp | CCTGGAAAAACCGTTGTCTCTGAAGTGAAACATGCAGGCCTGAAAGTGTCCGGTACTGGAGAAAGGCCATaGTCTGCATCTCGAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGKTVVSEVKHAGLKVSGTGERP*SASRML Trigger: CAACATTCGAGATGCAGAGCATGGCCTTTCTCCAGT...ACCGGACACTTTCAGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTTCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS-3UTR CCA 90 bp | GATGTCTTTGTAGATACATACCTCTATAGATTACAGGGCTATCTGGCTAGGCTTGCCACGAGCAGCACTTaGTGCTGGAAGCGCACGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVFVDTYLYRLQGYLARLATSST*CWKRTF Trigger: GAACGTGCGCTTCCAGCACCAAGTGCTGCTCGTGGC...AAGCCTAGCCAGATAGCCCTGTAATCTATAGAGGTATGTATCTACAAAGACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGTCCGGTCTTCTTCTCTaGATTGTTGAGCTTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVSGLLL*IVELVI Trigger: GATCACAAGCTCAACAATCCAGAGAAGAAGACCGGA...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAAAACCGTTGTCTCTGAAGTGAAACATGCAGGCCTGAAAGTGTCCGGTACATGCTCTGTGGGTTaGAGGGGAAGTTCAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PGKTVVSEVKHAGLKVSGTCSVG*RGSSSL Trigger: TAAACTTGAACTTCCCCTGCAACCCACAGAGCATGT...ACCGGACACTTTCAGGCCTGCATGTTTCACTTCAGAGACAACGGTTTTTCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR GCA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGAGAAAGGCCATGCTCTaGATCTCGAATGTTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKRKAML*ISNVDI Trigger: GATGTCAACATTCGAGATGCAGAGCATGGCCTTTCT...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
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| CDS TCA 90 bp | TGGACGACACGAGCGGGACGCGCAGGTGAGCCCCCTGCAGCCGGTTaGAGGTGGGGAACGTGCTCCAGGCGAGGAAGGCTTCAGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WTTRAGRAGEPPAAG*RWGTCSRRGRLQAP Trigger: CGGAGCCTGAAGCCTTCCTCGCCTGGAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCTCGTGTCGTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
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| CDS TCA 90 bp | GACACGACACGAGCGGGACGCGCAGGTGAGCCCCCTGCAGCCGGTTaGAGGTGGGGAACGTGCTCCAGGCGAGGAAGGCTTCAGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DTTRAGRAGEPPAAG*RWGTCSRRGRLQAP Trigger: CGGAGCCTGAAGCCTTCCTCGCCTGGAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCTCGTGTCGTGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| CDS TCA 90 bp | GCACCGCTATGCCCAGCTAGACACGACACGAGCGGGACGCGCAGGTaGGCCCCCTGCAGCCGGTTGAAGGTGGGGAACGTGCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: APLCPARHDTSGTRR*APCSRLKVGNVLQA Trigger: CGCCTGGAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCTCGTGTCGTGTCTAGCTGGGCATAGCGGTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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| CDS TCA 90 bp | TGGTTCCGGTCTTCTTCTCTGGACGACACGAGCGGGACGCGCAGGTaGGCCCCCTGCAGCCGGTTGAAGGTGGGGAACGTGCTCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WFRSSSLDDTSGTRR*APCSRLKVGNVLQA Trigger: CGCCTGGAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCTCGTGTCGTCCAGAGAAGAAGACCGGAACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
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| CDS-3UTR CAA 90 bp | TCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTTGCACCACCAGCCCCCTGCAGCCGGTaGAAGGTGGGGAACGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLPPPTMHRGYRLAPPAPCSR*KVGNVL Trigger: GAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGGC...TGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR CAA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGAGGAAGAGCGCGGCCTaGGAGCAGAGCCCCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKRKSAA*EQSPAR Trigger: CCGCGCGGGGCTCTGCTCCAAGGCCGCGCTCTTCCT...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR CAA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGGCCCCCTGCAGCCGGTaGAAGGTGGGGAACGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVAPCSR*KVGNVL Trigger: GAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGGC...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGCTCCTGCCTCCACCCACAATGCACCGGGGTTATAGGCTTGCACCACCAGACATGCTCTGTGGGTaGCAGGGGAAGTTCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLPPPTMHRGYRLAPPDMLCG*QGKFKF Trigger: AAACTTGAACTTCCCCTGCAACCCACAGAGCATGTC...TGGTGGTGCAAGCCTATAACCCCGGTGCATTGTGGGTGGAGGCAGGAGCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS-3UTR CAA 90 bp | CCTGAGACCTTTCCACAAACTAGTGTTTGTGGGTTCCCTCGGTGCTTTGAAGGCACCAGCCAGATCGGGTaGGGGTCACTGAGGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PETFPQTSVCGFPRCFEGTSQIG*GSLRTV Trigger: CACTGTCCTCAGTGACCCCAACCCGATCTGGCTGGT...GCCTTCAAAGCACCGAGGGAACCCACAAACACTAGTTTGTGGAAAGGTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGCGCTCTTCCAACTGAGCCACATCTCATAACCTTTTTGAAATTGAAATCAAGGAAGAGCGCGGCCTaGGAGCAGAGCCCCGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASALPTEPHLITFLKLKSRKSAA*EQSPAR Trigger: CCGCGCGGGGCTCTGCTCCAAGGCCGCGCTCTTCCT...TGATTTCAATTTCAAAAAGGTTATGAGATGTGGCTCAGTTGGAAGAGCGCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGTTGTAAGATGGCAGGTCTCAGAAGACAGGAATGAGGTAGCCGCGGTCAGCCACGAGCAGCACTaGGTGCTGGAAGCGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: RNVVRWQVSEDRNEVAAVSHEQH*VLEAHV Trigger: AACGTGCGCTTCCAGCACCAAGTGCTGCTCGTGGCT...GACCGCGGCTACCTCATTCCTGTCTTCTGAGACCTGCCATCTTACAACATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGACCTTTCCACAAACTAGTGTTTGTGGGTTCCCTCGGTGCTTTGAAGGCGGTAAGCGCGCTCGATaGGGTGAGAGAAGAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: PETFPQTSVCGFPRCFEGGKRAR*GERRDG Trigger: ACCATCTCTTCTCTCACCCAATCGAGCGCGCTTACC...GCCTTCAAAGCACCGAGGGAACCCACAAACACTAGTTTGTGGAAAGGTCTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CAA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGGGTAAGCGCGCTCGATaGGGTGAGAGAAGAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKGKRAR*GERRDG Trigger: ACCATCTCTTCTCTCACCCAATCGAGCGCGCTTACC...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS-3UTR CAA 90 bp | GGGTATCTTCTCAGGATAAGTGCTCTTTCCGTATCTCTCCCTGGGGCACGGCTAGACATGCTCTGTGGGTaGCAGGGGAAGTTCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GYLLRISALSVSLPGARLDMLCG*QGKFKF Trigger: AAACTTGAACTTCCCCTGCAACCCACAGAGCATGTC...TAGCCGTGCCCCAGGGAGAGATACGGAAAGAGCACTTATCCTGAGAAGATACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTGCTCAGCCTGACAGAAGGATGTCTCCAAGGTAAACTGAGGCACGTGGTGTGGATCCAGGCGAACTaGATCATCTCCCAGAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLSLTEGCLQGKLRHVVWIQAN*IISQNP Trigger: AGGGTTCTGGGAGATGATCAAGTTCGCCTGGATCCA...CACCACGTGCCTCAGTTTACCTTGGAGACATCCTTCTGTCAGGCTGAGCAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS-3UTR CAA 90 bp | TTGCACCACCATAAAGGTTTATGTGTAGCTGGGGATGGAACACAGGGCTCCAAGAAAGGACTTGTCCCATaGATCACGGACACGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LHHHKGLCVAGDGTQGSKKGLVP*ITDTLY Trigger: ATACAACGTGTCCGTGATCAATGGGACAAGTCCTTT...CTTGGAGCCCTGTGTTCCATCCCCAGCTACACATAAACCTTTATGGTGGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS TCA 72 bp | CGAGCGGGACGCGCAGGTGAGCCCCCTGCAGCCGGTTaGAGGTGGGGAACGTGCTCCAGGCGAGGAAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RAGRAGEPPAAG*RWGTCSRRGRL Trigger: AAGCCTTCCTCGCCTGGAGCACGTTCCCCACCTTCAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS TCA 72 bp | TGCCCAGCTAGACACGACACGAGCGGGACGCGCAGGTaGGCCCCCTGCAGCCGGTTGAAGGTGGGGAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: CPARHDTSGTRR*APCSRLKVGNV Trigger: CACGTTCCCCACCTTCAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCTCGTGTCGTGTCTAGCTGGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
||
| CDS CAA 90 bp | GAGGAAGGCTTCAGGCTCCGGCCCCAGGAGAGCCACGAGCAGCACTaGGTGCTGGAAGCGCACGTTCGGCTGCTCCTCGTAGCTGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: EEGFRLRPQESHEQH*VLEAHVRLLLVAAP Trigger: CGGAGCAGCTACGAGGAGCAGCCGAACGTGCGCTTCCAGCACCAAGTGCTGCTCGTGGCTCTCCTGGGGCCGGAGCCTGAAGCCTTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
||
| CDS TCA 72 bp | TCTTCTTCTCTGGACGACACGAGCGGGACGCGCAGGTaGGCCCCCTGCAGCCGGTTGAAGGTGGGGAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLDDTSGTRR*APCSRLKVGNV Trigger: CACGTTCCCCACCTTCAACCGGCTGCAGGGGGCTCACCTGCGCGTCCCGCTCGTGTCGTCCAGAGAAGAAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034429.9 |
||
| CDS GCA 72 bp | GGTGCTGGAAGCGCACGTTCGGCTGCTCCTCGTAGCTaGTCCGCTTCAGCCAAAACCCGTGGCTCCGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GAGSARSAAPRS*SASAKTRGSGR Trigger: CCTTCCGGAGCCACGGGTTTTGGCTGAAGCGGAGCAGCTACGAGGAGCAGCCGAACGTGCGCTTCCAGCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS CAA 72 bp | TTCAGGCTCCGGCCCCAGGAGAGCCACGAGCAGCACTaGGTGCTGGAAGCGCACGTTCGGCTGCTCCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: FRLRPQESHEQH*VLEAHVRLLLV Trigger: TACGAGGAGCAGCCGAACGTGCGCTTCCAGCACCAAGTGCTGCTCGTGGCTCTCCTGGGGCCGGAGCCTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034429.9 ENSMUST00000211866.2 |
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| CDS TCA 72 bp | CTGGTTCCGGTCTTCTTCTCTGGATTGTTGAGCTTGTaGTCGTCCTGTCTCAGCTCTGTGAGGAGCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: LVPVFFSGLLSL*SSCLSSVRSRW Trigger: CCATCTGCTCCTCACAGAGCTGAGACAGGACGATCACAAGCTCAACAATCCAGAGAAGAAGACCGGAACCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211866.2 |
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