Pregenerated sensors for TMEM229A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048022Ensembl transcript IDs: ENSMUST00000127247.4
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTTAAGGCTAGCCAACATTGGAAAGCGATCATTTCCAAGATGGTaGTCAAATATCTCAACACAGTGTCACCTGTTGGGGTTCACAGGA | + |
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Preference number: 1 (lower is better) Translates to: CLRLANIGKRSFPRW*SNISTQCHLLGFTG Trigger: TCCTGTGAACCCCAACAGGTGACACTGTGTTGAGATATTTGATCACCATCTTGGAAATGATCGCTTTCCAATGTTGGCTAGCCTTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 90 bp | AAGAAGTGGAGCAAACACGAAATGAGAAGCCCTAAAACAGCACACTaGGTTACCAGGCAGGTTAATCGTTTCCTGAATACACAACTAGCA | + |
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Preference number: 1 (lower is better) Translates to: KKWSKHEMRSPKTAH*VTRQVNRFLNTQLA Trigger: TGCTAGTTGTGTATTCAGGAAACGATTAACCTGCCTGGTAACTCAGTGTGCTGTTTTAGGGCTTCTCATTTCGTGTTTGCTCCACTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR GCA 90 bp | AACTCAGACTCCCATGCACGTGTCATGTTTGAAGTACAAATACCTTaGCCAGTGTCTAGGCATCTACCTAGATATTTTTCCCTCAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: NSDSHARVMFEVQIP*PVSRHLPRYFSLKH Trigger: ATGCTTGAGGGAAAAATATCTAGGTAGATGCCTAGACACTGGGCAAGGTATTTGTACTTCAAACATGACACGTGCATGGGAGTCTGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR CCA 90 bp | CATTTCCAAGATGGTGATCAAATATCTCAACACAGTGTCACCTGTTaGGGTTCACAGGAAAGACTTCCTCATGTCAAAATGAGTTCACGG | + |
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Preference number: 1 (lower is better) Translates to: HFQDGDQISQHSVTC*GSQERLPHVKMSSR Trigger: CCGTGAACTCATTTTGACATGAGGAAGTCTTTCCTGTGAACCCCAACAGGTGACACTGTGTTGAGATATTTGATCACCATCTTGGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 90 bp | GATCATAGCAAAAAGTCTCCTTTAAGAAGTGGAGCAAACACGAAATaGGAAGCCCTAAAACAGCACACTGAGTTACCAGGCAGGTTAATC | + |
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Preference number: 1 (lower is better) Translates to: DHSKKSPLRSGANTK*EALKQHTELPGRLI Trigger: GATTAACCTGCCTGGTAACTCAGTGTGCTGTTTTAGGGCTTCTCATTTCGTGTTTGCTCCACTTCTTAAAGGAGACTTTTTGCTATGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 90 bp | ATTATCTTTGTACTGAAAGCTGAGAGGTTATTATTCATCCTTGGCTaGGCTGCTCTCGGTCCTACTTGCTCGGTCCTGAATACAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: IIFVLKAERLLFILG*AALGPTCSVLNTIK Trigger: TTTTATTGTATTCAGGACCGAGCAAGTAGGACCGAGAGCAGCTCAGCCAAGGATGAATAATAACCTCTCAGCTTTCAGTACAAAGATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 90 bp | TTAAGAAACTTTCTAAGTTTTCCTGATTATCTTTGTACTGAAAGCTaGGAGGTTATTATTCATCCTTGGCTGAGCTGCTCTCGGTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: LRNFLSFPDYLCTES*EVIIHPWLSCSRSY Trigger: GTAGGACCGAGAGCAGCTCAGCCAAGGATGAATAATAACCTCTCAGCTTTCAGTACAAAGATAATCAGGAAAACTTAGAAAGTTTCTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 90 bp | GGAAAGTTATTGCACAGTTACAAAAGTTTTGATAACACCATGGTCTaGTTAATGTTAACACGCATTGTGTTTAAGGCTAGCCAACATTGG | + |
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Preference number: 1 (lower is better) Translates to: GKLLHSYKSFDNTMV*LMLTRIVFKASQHW Trigger: CCAATGTTGGCTAGCCTTAAACACAATGCGTGTTAACATTAATCAGACCATGGTGTTATCAAAACTTTTGTAACTGTGCAATAACTTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCTTGAACCACAGTGTCACCTGTTaGGGTTCACAGGAAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: TDESYNSNYRSPTPTVLNHSVTC*GSQERL Trigger: AAGTCTTTCCTGTGAACCCCAACAGGTGACACTGTG...GTTCAAGACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR CCA 90 bp | GACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCGAAGTCACTGTTCTCTaGTCTGAAAACTTCCATGAA | + |
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Preference number: 2 (lower is better) Translates to: DRTDESYNSNYRSPTPTVEVTVL*SENFHE Trigger: TTCATGGAAGTTTTCAGACCAGAGAACAGTGACTTC...GACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR TCA 90 bp | GACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCAAACCAAACAACTTATaGGAAACCTTTGGCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: DRTDESYNSNYRSPTPTVKPNNL*ETFGRH Trigger: ATGTCTGCCAAAGGTTTCTCATAAGTTGTTTGGTTT...GACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR GCA 90 bp | GGACAGAGGCACTTTTATAGCTGTGGACTAGAGTTTCTGAAGGACAAGACACGGAGAGATTCCAAGCAGTaGAGACAACTAAAATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: GQRHFYSCGLEFLKDKTRRDSKQ*RQLKCQ Trigger: TTGACATTTTAGTTGTCTGCACTGCTTGGAATCTCT...CCGTGTCTTGTCCTTCAGAAACTCTAGTCCACAGCTATAAAAGTGCCTCTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR GCA 90 bp | CATAGTATTCCTGGGACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACAAGGTAAAAGGAAACTaGATTGAAAGGAAAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: HSIPGTGLMRVTTPTTGHKVKGN*IERKAN Trigger: GTTGGCTTTCCTTTCAATGCAGTTTCCTTTTACCTT...GTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTCCCAGGAATACTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCTTGAACATGAAAAGAATTAGTTaGCCATCATCCATCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: TDESYNSNYRSPTPTVLNMKRIS*PSSISQ Trigger: CTGTGAGATGGATGATGGCCAACTAATTCTTTTCAT...GTTCAAGACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR GCA 90 bp | CAACTTTATTGGGGTTTCTCTTTGATATCCGGACTTCTGTATCTATTGTTAACACAGGATATCCTTATGTaGCCTACAGTGACCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: QLYWGFSLISGLLYLLLTQDILM*PTVTSN Trigger: GTTTGAGGTCACTGTAGGGCACATAAGGATATCCTG...TGTTAACAATAGATACAGAAGTCCGGATATCAAAGAGAAACCCCAATAAAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR TCA 90 bp | CAACTTTATTGGGGTTTCTCTTTGATATCCGGACTTCTGTATCTATTGTTAACACTGTTAAAAACAAACTaGGGAGTCCAGCATCCATTA | + |
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Preference number: 2 (lower is better) Translates to: QLYWGFSLISGLLYLLLTLLKTN*GVQHPL Trigger: TAATGGATGCTGGACTCCTCAGTTTGTTTTTAACAG...TGTTAACAATAGATACAGAAGTCCGGATATCAAAGAGAAACCCCAATAAAGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR CCA 90 bp | CAACTTTATTGGGGTTTCTCTTTGATATCCGGACTTCTGTATCTATTGTTAACAATGTCAAGCACATATTaGCAGAGTTTGGTAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: QLYWGFSLISGLLYLLLTMSSTY*QSLVKC Trigger: ACACTTTACCAAACTCTGCCAATATGTGCTTGACAT...TGTTAACAATAGATACAGAAGTCCGGATATCAAAGAGAAACCCCAATAAAGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR GCA 72 bp | ACGGGATGTTTTCCCACTTGCCAGCTTCCTCTCATCTaGACGCTGGACAGAGGCACTTTTATAGCTGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: TGCFPTCQLPLI*TLDRGTFIAVD Trigger: GTCCACAGCTATAAAAGTGCCTCTGTCCAGCGTGCAGATGAGAGGAAGCTGGCAAGTGGGAAAACATCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR GCA 72 bp | TCATGTCAAAATGAGTTCACGGGATGTTTTCCCACTTaGCAGCTTCCTCTCATCTGCACGCTGGACAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: SCQNEFTGCFPT*QLPLICTLDRG Trigger: GCCTCTGTCCAGCGTGCAGATGAGAGGAAGCTGGCAAGTGGGAAAACATCCCGTGAACTCATTTTGACATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | GTACTGAAAGCTGAGAGGTTATTATTCATCCTTGGCTaGGCTGCTCTCGGTCCTACTTGCTCGGTCCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: VLKAERLLFILG*AALGPTCSVLN Trigger: ATTCAGGACCGAGCAAGTAGGACCGAGAGCAGCTCAGCCAAGGATGAATAATAACCTCTCAGCTTTCAGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | CTTTTAAAAGGCAGGATATCCTTATGTGCCCTACAGTaGCCTCAAACCTGCAATCCTCCTGCCGCAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: LLKGRISLCALQ*PQTCNPPAAVA Trigger: AGCTACTGCGGCAGGAGGATTGCAGGTTTGAGGTCACTGTAGGGCACATAAGGATATCCTGCCTTTTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR CAA 90 bp | GACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCATGCACGTGTCATGTTaGAAGTACAAATACCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: DRTDESYNSNYRSPTPTVMHVSC*KYKYLA Trigger: GGCAAGGTATTTGTACTTCAAACATGACACGTGCAT...GACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR GCA 72 bp | TGCAACAACAACATCTGCTGTCTATACAGTTGTCTGTaGATCTCTAACAGTCAAGGGAAGTGCAGTCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: CNNNICCLYSCL*ISNSQGKCSPD Trigger: GTCTGGACTGCACTTCCCTTGACTGTTAGAGATGCACAGACAACTGTATAGACAGCAGATGTTGTTGTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR CAA 90 bp | CATAGTATTCCTGGGACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACAATGTCAAGCACATATaGGCAGAGTTTGGTAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: HSIPGTGLMRVTTPTTGHNVKHI*AEFGKV Trigger: CACTTTACCAAACTCTGCCAATATGTGCTTGACATT...GTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTCCCAGGAATACTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | CTAGCCAACATTGGAAAGCGATCATTTCCAAGATGGTaGTCAAATATCTCAACACAGTGTCACCTGTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LANIGKRSFPRW*SNISTQCHLLG Trigger: CCCCAACAGGTGACACTGTGTTGAGATATTTGATCACCATCTTGGAAATGATCGCTTTCCAATGTTGGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR GCA 72 bp | CAGGTTAATCGTTTCCTGAATACACAACTAGCAATCTaGAGAACTGGCAGAGGGGCTGGTAATTGGGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: QVNRFLNTQLAI*RTGRGAGNWVN Trigger: ATTAACCCAATTACCAGCCCCTCTGCCAGTTCTGCAGATTGCTAGTTGTGTATTCAGGAAACGATTAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | CTGTGTAGAAAAGGGTCCTTAGAGTTAGAACATGATTaGAGGTGGTCTAATTTCATTCGGCCCTGGGATCTA | + |
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Preference number: 3 (lower is better) Translates to: LCRKGSLELEHD*RWSNFIRPWDL Trigger: TAGATCCCAGGGCCGAATGAAATTAGACCACCTTCAATCATGTTCTAACTCTAAGGACCCTTTTCTACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | AGCAAACACGAAATGAGAAGCCCTAAAACAGCACACTaGGTTACCAGGCAGGTTAATCGTTTCCTGAATACA | + |
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Preference number: 3 (lower is better) Translates to: SKHEMRSPKTAH*VTRQVNRFLNT Trigger: TGTATTCAGGAAACGATTAACCTGCCTGGTAACTCAGTGTGCTGTTTTAGGGCTTCTCATTTCGTGTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | AAAAAGTCTCCTTTAAGAAGTGGAGCAAACACGAAATaGGAAGCCCTAAAACAGCACACTGAGTTACCAGGC | + |
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Preference number: 3 (lower is better) Translates to: KKSPLRSGANTK*EALKQHTELPG Trigger: GCCTGGTAACTCAGTGTGCTGTTTTAGGGCTTCTCATTTCGTGTTTGCTCCACTTCTTAAAGGAGACTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR GCA 72 bp | TCCCATGCACGTGTCATGTTTGAAGTACAAATACCTTaGCCAGTGTCTAGGCATCTACCTAGATATTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SHARVMFEVQIP*PVSRHLPRYFS Trigger: GGAAAAATATCTAGGTAGATGCCTAGACACTGGGCAAGGTATTTGTACTTCAAACATGACACGTGCATGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR CCA 72 bp | GATGGTGATCAAATATCTCAACACAGTGTCACCTGTTaGGGTTCACAGGAAAGACTTCCTCATGTCAAAATG | + |
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Preference number: 3 (lower is better) Translates to: DGDQISQHSVTC*GSQERLPHVKM Trigger: CATTTTGACATGAGGAAGTCTTTCCTGTGAACCCCAACAGGTGACACTGTGTTGAGATATTTGATCACCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | GAATTAGTTGGCCATCATCCATCTCACAGGTGCAGTTaGCTATATAGCAATACTTATAATTTAGCGCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: ELVGHHPSHRCS*LYSNTYNLAQG Trigger: CCCCTGCGCTAAATTATAAGTATTGCTATATAGTCAACTGCACCTGTGAGATGGATGATGGCCAACTAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | GACCGAGGCACAATCAAGCTGCTGTTAAAAACAAACTaGGGAGTCCAGCATCCATTAATTCAAATATATGCT | + |
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Preference number: 3 (lower is better) Translates to: DRGTIKLLLKTN*GVQHPLIQIYA Trigger: AGCATATATTTGAATTAATGGATGCTGGACTCCTCAGTTTGTTTTTAACAGCAGCTTGATTGTGCCTCGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR GCA 72 bp | GTCAAAAAGCTATCATGGATTAATACTGTGCATTACTaGATCAGCCTGACACCAAATTCTGGGTCTGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: VKKLSWINTVHY*ISLTPNSGSER Trigger: TCTTTCAGACCCAGAATTTGGTGTCAGGCTGATGCAGTAATGCACAGTATTAATCCATGATAGCTTTTTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR-3UTR CAA 90 bp | CCACAGTTGGCTAACACTGTTCTCAGTTTGAGTGTGTTTAGTTCTTACAATGATAGCAACATGAATCTTTaGCAACAACAACATCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: PQLANTVLSLSVFSSYNDSNMNL*QQQHLL Trigger: CAGCAGATGTTGTTGTTGCAAAAGATTCATGTTGCT...ATCATTGTAAGAACTAAACACACTCAAACTGAGAACAGTGTTAGCCAACTGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | TTTCTAAGTTTTCCTGATTATCTTTGTACTGAAAGCTaGGAGGTTATTATTCATCCTTGGCTGAGCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: FLSFPDYLCTES*EVIIHPWLSCS Trigger: AGAGCAGCTCAGCCAAGGATGAATAATAACCTCTCAGCTTTCAGTACAAAGATAATCAGGAAAACTTAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR TCA 72 bp | TTGCACAGTTACAAAAGTTTTGATAACACCATGGTCTaGTTAATGTTAACACGCATTGTGTTTAAGGCTAGC | + |
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Preference number: 3 (lower is better) Translates to: LHSYKSFDNTMV*LMLTRIVFKAS Trigger: GCTAGCCTTAAACACAATGCGTGTTAACATTAATCAGACCATGGTGTTATCAAAACTTTTGTAACTGTGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR GCA 90 bp | GACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCTCCGCAGATCCAGGCTaGGGGCGAAGCGCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DRTDESYNSNYRSPTPTVSADPG*GRSAWQ Trigger: CTGCCAGGCGCTTCGCCCGCAGCCTGGATCTGCGGA...GACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | GGACAGAGGCACTTTTATAGCTGTGGACTAGAGTTTCTGAAGGACAAGACACGGCGGGTAGCGTGTCCCTaGTGTGCTGGTCGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GQRHFYSCGLEFLKDKTRRVACP*CAGRAA Trigger: GGCGGCGCGACCAGCACACCAGGGACACGCTACCCG...CCGTGTCTTGTCCTTCAGAAACTCTAGTCCACAGCTATAAAAGTGCCTCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | GGACAGAGGCACTTTTATAGCTGTGGACTAGAGTTTCTGAAGGACAAGACACGGCTGAGCCGTAGCGCCTaGCCAGCCAGGGTCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GQRHFYSCGLEFLKDKTRLSRSA*PARVCS Trigger: GCTGCAGACCCTGGCTGGCCAGGCGCTACGGCTCAG...CCGTGTCTTGTCCTTCAGAAACTCTAGTCCACAGCTATAAAAGTGCCTCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR GCA 90 bp | ACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCTTGAACAGCGCGAGCACGTACTaGAGCGCCAGGTCGAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: TDESYNSNYRSPTPTVLNSASTY*SARSSA Trigger: GGCGCTCGACCTGGCGCTGCAGTACGTGCTCGCGCT...GTTCAAGACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR GCA 90 bp | GACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCCTGGCCCTGTCCCCCTaGCCCAGCACATTGAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DRTDESYNSNYRSPTPTVLALSP*PSTLKK Trigger: CTTCTTCAATGTGCTGGGGCAGGGGGACAGGGCCAG...GACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | CATAGTATTCCTGGGACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACGACCAGAGGGATGTGTaGCCACTGCTGGCCCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HSIPGTGLMRVTTPTTGHDQRDV*PLLALS Trigger: GGACAGGGCCAGCAGTGGCCACACATCCCTCTGGTC...GTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTCCCAGGAATACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR TCA 90 bp | ACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCTTGAACCCAGCACGTCCAGGGTaGTGCCGTGCATCCCGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TDESYNSNYRSPTPTVLNPARPG*CRASRR Trigger: TCTACGGGATGCACGGCATCACCCTGGACGTGCTGG...GTTCAAGACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | ACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCTTGAACTGCTCCAGGGCGAAGTaGGTGAGCGAGTGCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TDESYNSNYRSPTPTVLNCSRAK*VSECRR Trigger: CCTCCTGCACTCGCTCACCCACTTCGCCCTGGAGCA...GTTCAAGACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR TCA 90 bp | TACTACCCGTTCCTGATGTTAAGGTCCAGTGGTTTTGCTGTTTGGCCTCGTAAAGAGGCAGCGGTAGGGTaGAGAGAAACCCAGCATCCG | + |
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Preference number: 4 (lower is better) Translates to: YYPFLMLRSSGFAVWPRKEAAVG*RETQHP Trigger: CGGATGCTGGGTTTCTCTTCACCCTACCGCTGCCTC...TTTACGAGGCCAAACAGCAAAACCACTGGACCTTAACATCAGGAACGGGTAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR TCA 90 bp | GGTAAACAGGAAAGTTATTGCACAGTTACAAAAGTTTTGATAACACCATGGTCTGCCCGCCGCCTAGGCTaGGCCGTAGCGCCTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GKQESYCTVTKVLITPWSARRLG*AVAPGQ Trigger: CTGGCCAGGCGCTACGGCTCAGCCTAGGCGGCGGGC...AGACCATGGTGTTATCAAAACTTTTGTAACTGTGCAATAACTTTCCTGTTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | TTAATGTTAACACGCATTGTGTTTAAGGCTAGCCAACATTGGAAAGCGATCATTTACGCAGTCCGCCGGTaGCCCCGGGTCTCCGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LMLTRIVFKASQHWKAIIYAVRR*PRVSGS Trigger: CGACCCGGAGACCCGGGGCCACCGGCGGACTGCGTA...AATGATCGCTTTCCAATGTTGGCTAGCCTTAAACACAATGCGTGTTAACATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | CCACAGTTGGCTAACACTGTTCTCAGTTTGAGTGTGTTTAGTTCTTACAATGATGCCTCCCAAAGGATCTaGGCGTCCCGGGCTGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: PQLANTVLSLSVFSSYNDASQRI*ASRAAG Trigger: ACCCGCAGCCCGGGACGCCCAGATCCTTTGGGAGGC...ATCATTGTAAGAACTAAACACACTCAAACTGAGAACAGTGTTAGCCAACTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | CCACAGTTGGCTAACACTGTTCTCAGTTTGAGTGTGTTTAGTTCTTACAATGATCCCGGTCCTCGTCGCTaGCCACCAGCCTCCCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: PQLANTVLSLSVFSSYNDPGPRR*PPASQR Trigger: CCTTTGGGAGGCTGGTGGCCAGCGACGAGGACCGGG...ATCATTGTAAGAACTAAACACACTCAAACTGAGAACAGTGTTAGCCAACTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR GCA 90 bp | GGTAAACAGGAAAGTTATTGCACAGTTACAAAAGTTTTGATAACACCATGGTCTGCACCCGCTTCCACGTaGCCCAGCCACGGCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GKQESYCTVTKVLITPWSAPAST*PSHGCS Trigger: ACTACAGCCGTGGCTGGGGCACGTGGAAGCGGGTGC...AGACCATGGTGTTATCAAAACTTTTGTAACTGTGCAATAACTTTCCTGTTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | CAACTTTATTGGGGTTTCTCTTTGATATCCGGACTTCTGTATCTATTGTTAACATGCGGGCGAAGCGCCTaGCAGAGGATACCAGCACGT | + |
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Preference number: 4 (lower is better) Translates to: QLYWGFSLISGLLYLLLTCGRSA*QRIPAR Trigger: ACGTGCTGGTATCCTCTGCCAGGCGCTTCGCCCGCA...TGTTAACAATAGATACAGAAGTCCGGATATCAAAGAGAAACCCCAATAAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | CATAGTATTCCTGGGACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACTTGGACAGGAGGTCCTaGTACACACTAAGAAATAGC | + |
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Preference number: 4 (lower is better) Translates to: HSIPGTGLMRVTTPTTGHLDRRS*YTLRNS Trigger: GCTATTTCTTAGTGTGTACCAGGACCTCCTGTCCAA...GTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTCCCAGGAATACTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR GCA 90 bp | GGACAGAGGCACTTTTATAGCTGTGGACTAGAGTTTCTGAAGGACAAGACACGGTCATCCAGAAAGCCATaGATTCCGAAGAAAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQRHFYSCGLEFLKDKTRSSRKP*IPKKRK Trigger: CTTCCTTTTCTTCGGAATGCATGGCTTTCTGGATGA...CCGTGTCTTGTCCTTCAGAAACTCTAGTCCACAGCTATAAAAGTGCCTCTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR TCA 90 bp | TTAATGTTAACACGCATTGTGTTTAAGGCTAGCCAACATTGGAAAGCGATCATTGGTAAAGCAGGAAATTaGAGAGGAAGGCGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LMLTRIVFKASQHWKAIIGKAGN*RGRRWG Trigger: GCCCCAGCGCCTTCCTCTTCAATTTCCTGCTTTACC...AATGATCGCTTTCCAATGTTGGCTAGCCTTAAACACAATGCGTGTTAACATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CCA 90 bp | CAACTTTATTGGGGTTTCTCTTTGATATCCGGACTTCTGTATCTATTGTTAACACCCGCCACAACACGTTaGACAGGAGGTCCTGGTACA | + |
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Preference number: 4 (lower is better) Translates to: QLYWGFSLISGLLYLLLTPATTR*TGGPGT Trigger: TGTACCAGGACCTCCTGTCCAACGTGTTGTGGCGGG...TGTTAACAATAGATACAGAAGTCCGGATATCAAAGAGAAACCCCAATAAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR TCA 90 bp | TTAATGTTAACACGCATTGTGTTTAAGGCTAGCCAACATTGGAAAGCGATCATTACTCCCACGCATAGATaGAGATCACATAGATGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LMLTRIVFKASQHWKAIITPTHR*RSHRWA Trigger: TGCCCATCTATGTGATCTTCATCTATGCGTGGGAGT...AATGATCGCTTTCCAATGTTGGCTAGCCTTAAACACAATGCGTGTTAACATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| 3UTR CAA 72 bp | GGTGTGCTACCACAGTTGGCTAACACTGTTCTCAGTTaGAGTGTGTTTAGTTCTTACAATGATATCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GVLPQLANTVLS*SVFSSYNDICF Trigger: AAAGCAGATATCATTGTAAGAACTAAACACACTCAAACTGAGAACAGTGTTAGCCAACTGTGGTAGCACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 90 bp | GGAGCTTCAGCAGCGGACAGCGGCTCAGGGCAGCTGGCGGCCGCCTaGCTACGCAGTCCGCCGGTGGCCCCGGGTCTCCGGGTCGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: GASAADSGSGQLAAA*LRSPPVAPGLRVAP Trigger: CGGCGCGACCCGGAGACCCGGGGCCACCGGCGGACTGCGTAGCCAGGCGGCCGCCAGCTGCCCTGAGCCGCTGTCCGCTGCTGAAGCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 90 bp | CGCGCTCGGCCGGAGCTTCAGCAGCGGACAGCGGCTCAGGGCAGCTaGCGGCCGCCTGGCTACGCAGTCCGCCGGTGGCCCCGGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RARPELQQRTAAQGS*RPPGYAVRRWPRVS Trigger: GGAGACCCGGGGCCACCGGCGGACTGCGTAGCCAGGCGGCCGCCAGCTGCCCTGAGCCGCTGTCCGCTGCTGAAGCTCCGGCCGAGCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 90 bp | GCGCCACCCGGTCCTCGTCGCTGGCCACCAGCCTCCCAAAGGATCTaGGCGTCCCGGGCTGCGGGTAGCGTGTCCCTGGTGTGCTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: APPGPRRWPPASQRI*ASRAAGSVSLVCWS Trigger: CGACCAGCACACCAGGGACACGCTACCCGCAGCCCGGGACGCCCAGATCCTTTGGGAGGCTGGTGGCCAGCGACGAGGACCGGGTGGCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS TCA 90 bp | GGCTGCGGGCGAAGCGCCTGGCAGAGGATACCAGCACGTCCAGGGTaGTGCCGTGCATCCCGTAGAAGTAGAGGCGCATCCAGGCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GCGRSAWQRIPARPG*CRASRRSRGASRRA Trigger: TGCCCGCCTGGATGCGCCTCTACTTCTACGGGATGCACGGCATCACCCTGGACGTGCTGGTATCCTCTGCCAGGCGCTTCGCCCGCAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS GCA 90 bp | GAGGAGGTCGGGCAGTCCCTGGGTAGGAGATCGTTCTGTGCCCCTTaGGCCACCCGGTCCTCGTCGCTGGCCACCAGCCTCCCAAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: EEVGQSLGRRSFCAP*ATRSSSLATSLPKD Trigger: ATCCTTTGGGAGGCTGGTGGCCAGCGACGAGGACCGGGTGGCGCAAGGGGCACAGAACGATCTCCTACCCAGGGACTGCCCGACCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS TCA 90 bp | CCAGGGTCTGCAGCCCGACGTGCGCAGAGGGGTAAAGCAGGAAATTaGAGAGGAAGGCGCTGGGGCAGCGCGGCCGCTGCAGGTAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: PGSAARRAQRGKAGN*RGRRWGSAAAAGRA Trigger: AGCTCTACCTGCAGCGGCCGCGCTGCCCCAGCGCCTTCCTCTTCAATTTCCTGCTTTACCCCTCTGCGCACGTCGGGCTGCAGACCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 90 bp | ACGAAACTACAACTTCCGTACATGAAGAAAGACCAGAGGGATGTGTaGCCACTGCTGGCCCTGTCCCCCTGCCCCAGCACATTGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: TKLQLPYMKKDQRDV*PLLALSPCPSTLKK Trigger: CTTCTTCAATGTGCTGGGGCAGGGGGACAGGGCCAGCAGTGGCCACACATCCCTCTGGTCTTTCTTCATGTACGGAAGTTGTAGTTTCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CAA 90 bp | GACAGGACTGATGAGAGTTACAACTCCAACTACCGGTCACCAACACCAACAGTCACCCGCCACAACACGTaGGACAGGAGGTCCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: DRTDESYNSNYRSPTPTVTRHNT*DRRSWY Trigger: GTACCAGGACCTCCTGTCCAACGTGTTGTGGCGGGT...GACTGTTGGTGTTGGTGACCGGTAGTTGGAGTTGTAACTCTCATCAGTCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS-3UTR CAA 90 bp | TACTACCCGTTCCTGATGTTAAGGTCCAGTGGTTTTGCTGTTTGGCCTCGTAAAGCGCTTCAGGAACACTaGGCCGTGGTAGAGCGCGAG | + |
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Preference number: 5 (lower is better) Translates to: YYPFLMLRSSGFAVWPRKALQEH*AVVERE Trigger: CTCGCGCTCTACCACGGCCAAGTGTTCCTGAAGCGC...TTTACGAGGCCAAACAGCAAAACCACTGGACCTTAACATCAGGAACGGGTAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS TCA 90 bp | GGTGGAAGTAGAGTTTTTCCACCACGAAACTACAACTTCCGTACATaGAGAAAGACCAGAGGGATGTGTGGCCACTGCTGGCCCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GGSRVFPPRNYNFRT*RKTRGMCGHCWPCP Trigger: GGGACAGGGCCAGCAGTGGCCACACATCCCTCTGGTCTTTCTTCATGTACGGAAGTTGTAGTTTCGTGGTGGAAAAACTCTACTTCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS GCA 90 bp | AGCACATTGAAGAAGAAGGTGAAGAAGATCTCATCCAGAAAGCCATaGATTCCGAAGAAAAGGAAGCGGAGGAGGTCGGGCAGTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: STLKKKVKKISSRKP*IPKKRKRRRSGSPW Trigger: CCAGGGACTGCCCGACCTCCTCCGCTTCCTTTTCTTCGGAATGCATGGCTTTCTGGATGAGATCTTCTTCACCTTCTTCTTCAATGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 90 bp | GTTGGGACATACTGCACCCGCCACAACACGTTGGACAGGAGGTCCTaGTACACACTAAGAAATAGCCAGCCAGGTAAATACATCAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: VGTYCTRHNTLDRRS*YTLRNSQPGKYIKV Trigger: CACCTTGATGTATTTACCTGGCTGGCTATTTCTTAGTGTGTACCAGGACCTCCTGTCCAACGTGTTGTGGCGGGTGCAGTATGTCCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 72 bp | GCAGCGGACAGCGGCTCAGGGCAGCTGGCGGCCGCCTaGCTACGCAGTCCGCCGGTGGCCCCGGGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: AADSGSGQLAAA*LRSPPVAPGLR Trigger: CCGGAGACCCGGGGCCACCGGCGGACTGCGTAGCCAGGCGGCCGCCAGCTGCCCTGAGCCGCTGTCCGCTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 72 bp | CCGGAGCTTCAGCAGCGGACAGCGGCTCAGGGCAGCTaGCGGCCGCCTGGCTACGCAGTCCGCCGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PELQQRTAAQGS*RPPGYAVRRWP Trigger: GGGCCACCGGCGGACTGCGTAGCCAGGCGGCCGCCAGCTGCCCTGAGCCGCTGTCCGCTGCTGAAGCTCCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS TCA 72 bp | GGTGGCCCCGGGTCTCCGGGTCGCGCCGTCCCTCGGTaGTGGCCCCTCACTCGCCACATCGCTGCCCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GGPGSPGRAVPR*WPLTRHIAARH Trigger: ATGGCGGGCAGCGATGTGGCGAGTGAGGGGCCATCACCGAGGGACGGCGCGACCCGGAGACCCGGGGCCACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 72 bp | GGTCCTCGTCGCTGGCCACCAGCCTCCCAAAGGATCTaGGCGTCCCGGGCTGCGGGTAGCGTGTCCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPRRWPPASQRI*ASRAAGSVSLV Trigger: CACCAGGGACACGCTACCCGCAGCCCGGGACGCCCAGATCCTTTGGGAGGCTGGTGGCCAGCGACGAGGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CAA 90 bp | GCGCCGCCGCGGGTACCGCAAACACAAGAAGCGCTTCAGGAACACTaGGCCGTGGTAGAGCGCGAGCACGTACTGCAGCGCCAGGTCGAG | + |
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Preference number: 6 (lower is better) Translates to: APPRVPQTQEALQEH*AVVEREHVLQRQVE Trigger: CTCGACCTGGCGCTGCAGTACGTGCTCGCGCTCTACCACGGCCAAGTGTTCCTGAAGCGCTTCTTGTGTTTGCGGTACCCGCGGCGGCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS TCA 72 bp | CGAAGCGCCTGGCAGAGGATACCAGCACGTCCAGGGTaGTGCCGTGCATCCCGTAGAAGTAGAGGCGCATCC | + |
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Preference number: 6 (lower is better) Translates to: RSAWQRIPARPG*CRASRRSRGAS Trigger: GGATGCGCCTCTACTTCTACGGGATGCACGGCATCACCCTGGACGTGCTGGTATCCTCTGCCAGGCGCTTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS GCA 72 bp | AGGGTGAAGAGAAACCCAGCATCCGCAGATCCAGGCTaGGGGCGAAGCGCCTGGCAGAGGATACCAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: RVKRNPASADPG*GRSAWQRIPAR Trigger: ACGTGCTGGTATCCTCTGCCAGGCGCTTCGCCCGCAGCCTGGATCTGCGGATGCTGGGTTTCTCTTCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CAA 72 bp | CGGGTACCGCAAACACAAGAAGCGCTTCAGGAACACTaGGCCGTGGTAGAGCGCGAGCACGTACTGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RVPQTQEALQEH*AVVEREHVLQR Trigger: GCGCTGCAGTACGTGCTCGCGCTCTACCACGGCCAAGTGTTCCTGAAGCGCTTCTTGTGTTTGCGGTACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 72 bp | CAACTTCCGTACATGAAGAAAGACCAGAGGGATGTGTaGCCACTGCTGGCCCTGTCCCCCTGCCCCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: QLPYMKKDQRDV*PLLALSPCPST Trigger: TGTGCTGGGGCAGGGGGACAGGGCCAGCAGTGGCCACACATCCCTCTGGTCTTTCTTCATGTACGGAAGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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| CDS CCA 72 bp | TACTGCACCCGCCACAACACGTTGGACAGGAGGTCCTaGTACACACTAAGAAATAGCCAGCCAGGTAAATAC | + |
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Preference number: 6 (lower is better) Translates to: YCTRHNTLDRRS*YTLRNSQPGKY Trigger: GTATTTACCTGGCTGGCTATTTCTTAGTGTGTACCAGGACCTCCTGTCCAACGTGTTGTGGCGGGTGCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127247.4 |
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