RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM225 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040541

Ensembl transcript IDs: ENSMUST00000046333.9, ENSMUST00000238613.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGGGTGTGTGGTCTATTTAAGGAGCCATCCTTTGAGGTCACAGAGTaGACATGGACGATGCTTCGAGGCATTGCACATCGTGGCGGAAGT +
Preference number: 5 (lower is better)
Translates to: WVCGLFKEPSFEVTE*TWTMLRGIAHRGGS
Trigger: ACTTCCGCCACGATGTGCAATGCCTCGAAGCATCGTCCATGTGCACTCTGTGACCTCAAAGGATGGCTCCTTAAATAGACCACACACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS TCA 90 bp CTCTCTTCGGGCCAAAAAGGAGGACAGCATCCCAGCCATGGACTGTaGGTAGTTTTATCCTTTCTCACTTTGGGAATCAGTTCCACCCAG +
Preference number: 5 (lower is better)
Translates to: LSSGQKGGQHPSHGL*VVLSFLTLGISSTQ
Trigger: CTGGGTGGAACTGATTCCCAAAGTGAGAAAGGATAAAACTACTCACAGTCCATGGCTGGGATGCTGTCCTCCTTTTTGGCCCGAAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046333.9
ENSMUST00000238613.2
CDS CCA 90 bp CTCCAGGCTCTCTTCGGGCCAAAAAGGAGGACAGCATCCCAGCCATaGACTGTGAGTAGTTTTATCCTTTCTCACTTTGGGAATCAGTTC +
Preference number: 5 (lower is better)
Translates to: LQALFGPKRRTASQP*TVSSFILSHFGNQF
Trigger: GAACTGATTCCCAAAGTGAGAAAGGATAAAACTACTCACAGTCCATGGCTGGGATGCTGTCCTCCTTTTTGGCCCGAAGAGAGCCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046333.9
ENSMUST00000238613.2
CDS GCA 90 bp CATGCATTCGCATCTATTTGTGCTCTGTATGAAACAGAAGATACCTaGGAAGAAACTCAGGAAGCCAACAAGGAGATGCACACACTTGTT +
Preference number: 5 (lower is better)
Translates to: HAFASICALYETEDT*EETQEANKEMHTLV
Trigger: AACAAGTGTGTGCATCTCCTTGTTGGCTTCCTGAGTTTCTTCGCAGGTATCTTCTGTTTCATACAGAGCACAAATAGATGCGAATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238613.2
CDS CCA 90 bp ACTTCGATTGTACTCGGAATCATTTCTTGGCTTTTACTTTCTGTGTaGGGTATACAGAATTTCATGCATTCGCATCTATTTGTGCTCTGT +
Preference number: 5 (lower is better)
Translates to: TSIVLGIISWLLLSV*GIQNFMHSHLFVLC
Trigger: ACAGAGCACAAATAGATGCGAATGCATGAAATTCTGTATACCCCACACAGAAAGTAAAAGCCAAGAAATGATTCCGAGTACAATCGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS CCA 72 bp TTTAAGGAGCCATCCTTTGAGGTCACAGAGTGCACATaGACGATGCTTCGAGGCATTGCACATCGTGGCGGA +
Preference number: 6 (lower is better)
Translates to: FKEPSFEVTECT*TMLRGIAHRGG
Trigger: TCCGCCACGATGTGCAATGCCTCGAAGCATCGTCCATGTGCACTCTGTGACCTCAAAGGATGGCTCCTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS CAA 90 bp TTACCCGACGTGCTTGGGTGTGTGGTCTATTTAAGGAGCCATCCTTaGAGGTCACAGAGTGCACATGGACGATGCTTCGAGGCATTGCAC +
Preference number: 6 (lower is better)
Translates to: LPDVLGCVVYLRSHP*RSQSAHGRCFEALH
Trigger: GTGCAATGCCTCGAAGCATCGTCCATGTGCACTCTGTGACCTCAAAGGATGGCTCCTTAAATAGACCACACACCCAAGCACGTCGGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS CAA 72 bp GTGCTTGGGTGTGTGGTCTATTTAAGGAGCCATCCTTaGAGGTCACAGAGTGCACATGGACGATGCTTCGAG +
Preference number: 6 (lower is better)
Translates to: VLGCVVYLRSHP*RSQSAHGRCFE
Trigger: CTCGAAGCATCGTCCATGTGCACTCTGTGACCTCAAAGGATGGCTCCTTAAATAGACCACACACCCAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS GCA 72 bp GGTCTATTTAAGGAGCCATCCTTTGAGGTCACAGAGTaGACATGGACGATGCTTCGAGGCATTGCACATCGT +
Preference number: 6 (lower is better)
Translates to: GLFKEPSFEVTE*TWTMLRGIAHR
Trigger: ACGATGTGCAATGCCTCGAAGCATCGTCCATGTGCACTCTGTGACCTCAAAGGATGGCTCCTTAAATAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS CCA 72 bp CTCTTCGGGCCAAAAAGGAGGACAGCATCCCAGCCATaGACTGTGAGTAGTTTTATCCTTTCTCACTTTGGG +
Preference number: 6 (lower is better)
Translates to: LFGPKRRTASQP*TVSSFILSHFG
Trigger: CCCAAAGTGAGAAAGGATAAAACTACTCACAGTCCATGGCTGGGATGCTGTCCTCCTTTTTGGCCCGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046333.9
ENSMUST00000238613.2
CDS TCA 72 bp GGCCAAAAAGGAGGACAGCATCCCAGCCATGGACTGTaGGTAGTTTTATCCTTTCTCACTTTGGGAATCAGT +
Preference number: 6 (lower is better)
Translates to: GQKGGQHPSHGL*VVLSFLTLGIS
Trigger: ACTGATTCCCAAAGTGAGAAAGGATAAAACTACTCACAGTCCATGGCTGGGATGCTGTCCTCCTTTTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000046333.9
ENSMUST00000238613.2
CDS GCA 72 bp GTGATACACAATGATCGCATAGAACAAAAGGCAACCTaGGAAGAAACTCAGGAAGCCAACAAGGAGATGCAC +
Preference number: 6 (lower is better)
Translates to: VIHNDRIEQKAT*EETQEANKEMH
Trigger: GTGCATCTCCTTGTTGGCTTCCTGAGTTTCTTCGCAGGTTGCCTTTTGTTCTATGCGATCATTGTGTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS CCA 72 bp TCAACAGAAGTATGGCACCAGAGGAGAAGAATATGTTaGCAGCCTGGATACTTCTGTTTGGGATGTGCATCA +
Preference number: 6 (lower is better)
Translates to: STEVWHQRRRIC*QPGYFCLGCAS
Trigger: TGATGCACATCCCAAACAGAAGTATCCAGGCTGCCAACATATTCTTCTCCTCTGGTGCCATACTTCTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046333.9
ENSMUST00000238613.2
CDS CAA 72 bp GCATTGCACATCGTGGCGGAAGTGAAACAACTTCGATaGTACTCGGAATCATTTCTTGGCTTTTACTTTCTG +
Preference number: 6 (lower is better)
Translates to: ALHIVAEVKQLR*YSESFLGFYFL
Trigger: CAGAAAGTAAAAGCCAAGAAATGATTCCGAGTACAATCGAAGTTGTTTCACTTCCGCCACGATGTGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS TCA 72 bp AGAATTTCATGCATTCGCATCTATTTGTGCTCTGTATaGAACAGAAGATACCTGCGAAGAAACTCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: RISCIRIYLCSV*NRRYLRRNSGS
Trigger: GCTTCCTGAGTTTCTTCGCAGGTATCTTCTGTTTCATACAGAGCACAAATAGATGCGAATGCATGAAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238613.2
CDS CAA 72 bp ACTCAGGAAGCCAACAAGGAGATGCACACACTTGTTTaGAGAAATCATATAGGAGAACTGCAAACCTATGAT +
Preference number: 6 (lower is better)
Translates to: TQEANKEMHTLV*RNHIGELQTYD
Trigger: ATCATAGGTTTGCAGTTCTCCTATATGATTTCTCAAAACAAGTGTGTGCATCTCCTTGTTGGCTTCCTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046333.9
ENSMUST00000238613.2
CDS TCA 72 bp CATATTGACCTTTATTTAGCTTGTGGTGATACACAATaGTCGCATAGAACAAAAGGCAACCTGCGAAGAAAC +
Preference number: 6 (lower is better)
Translates to: HIDLYLACGDTQ*SHRTKGNLRRN
Trigger: GTTTCTTCGCAGGTTGCCTTTTGTTCTATGCGATCATTGTGTATCACCACAAGCTAAATAAAGGTCAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS CCA 72 bp GTACTCGGAATCATTTCTTGGCTTTTACTTTCTGTGTaGGGTATACAGAATTTCATGCATTCGCATCTATTT +
Preference number: 6 (lower is better)
Translates to: VLGIISWLLLSV*GIQNFMHSHLF
Trigger: AAATAGATGCGAATGCATGAAATTCTGTATACCCCACACAGAAAGTAAAAGCCAAGAAATGATTCCGAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9
CDS CCA 72 bp AGTGAAACAACTTCGATTGTACTCGGAATCATTTCTTaGCTTTTACTTTCTGTGTGGGGTATACAGAATTTC +
Preference number: 6 (lower is better)
Translates to: SETTSIVLGIIS*LLLSVWGIQNF
Trigger: GAAATTCTGTATACCCCACACAGAAAGTAAAAGCCAAGAAATGATTCCGAGTACAATCGAAGTTGTTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000046333.9