Pregenerated sensors for TMEM222 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028857Ensembl transcript IDs: ENSMUST00000105907.9, ENSMUST00000134781.8, ENSMUST00000137622.8, ENSMUST00000139030.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGGGCCCACATTAGCGGTGATGAGGCACACACTGTGCTGGTGTaGCAGAAAGAACATAGCCAGCCCTCCCGGTCCATTCGAGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: ARAHISGDEAHTVLV*QKEHSQPSRSIRGQ Trigger: CTGGCCTCGAATGGACCGGGAGGGCTGGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGCTAATGTGGGCCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 90 bp | TCGGTGCTTATACTCTTCGGAGGCATCGTGCACAGCCGTGTCCCATaGATTGGGCCCACTCGCATACACCTGTCCGGGGTCCAATTTCCA | + |
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Preference number: 1 (lower is better) Translates to: SVLILFGGIVHSRVP*IGPTRIHLSGVQFP Trigger: TGGAAATTGGACCCCGGACAGGTGTATGCGAGTGGGCCCAATGCATGGGACACGGCTGTGCACGATGCCTCCGAAGAGTATAAGCACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR GCA 90 bp | CACAACCACCAGCCAGCAAACAGCTTCAAATCCAGCTCTGAACACTaGTTTGCCCGTGGGTTCTTGTCCTCACTGTGCCCTGGGCATGGG | + |
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Preference number: 1 (lower is better) Translates to: HNHQPANSFKSSSEH*FARGFLSSLCPGHG Trigger: CCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAAGCAGTGTTCAGAGCTGGATTTGAAGCTGTTTGCTGGCTGGTGGTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR CCA 90 bp | GCTTATACTCTTCGGAGGCATCGTGCACAGCCGTGTCCCATGCATTaGGCCCACTCGCATACACCTGTCCGGGGTCCAATTTCCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: AYTLRRHRAQPCPMH*AHSHTPVRGPISRT Trigger: AGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGAGTGGGCCCAATGCATGGGACACGGCTGTGCACGATGCCTCCGAAGAGTATAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR GCA 90 bp | CAGCAGAGATTGTGCATTCGGTGCTTATACTCTTCGGAGGCATCGTaGACAGCCGTGTCCCATGCATTGGGCCCACTCGCATACACCTGT | + |
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Preference number: 1 (lower is better) Translates to: QQRLCIRCLYSSEAS*TAVSHALGPLAYTC Trigger: ACAGGTGTATGCGAGTGGGCCCAATGCATGGGACACGGCTGTGCACGATGCCTCCGAAGAGTATAAGCACCGAATGCACAATCTCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR CCA 90 bp | TGGGCCCACTCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCATGTTGTCTTCCTTCTGAAGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: WAHSHTPVRGPISRT*QAFRRPCCLPSEGP Trigger: TGGACCTTCAGAAGGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGAGTGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR GCA 90 bp | GGCCCAGGGAGAAAGGACAAGGAGGCTCTAAGTGACCTCATCAGGTaGTCAGTATCGGCACTTCTGTCCCAAGTCCTGACCCTACTTCAA | + |
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Preference number: 1 (lower is better) Translates to: GPGRKDKEALSDLIR*SVSALLSQVLTLLQ Trigger: TTGAAGTAGGGTCAGGACTTGGGACAGAAGTGCCGATACTGAGCACCTGATGAGGTCACTTAGAGCCTCCTTGTCCTTTCTCCCTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR CCA 90 bp | CAAGTCTCTTGGCGTGCAGCACTTCTCATAACACATGCCCTACTTTaGGACACAACCACCAGCCAGCAAACAGCTTCAAATCCAGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: QVSWRAALLITHALL*DTTTSQQTASNPAL Trigger: CAGAGCTGGATTTGAAGCTGTTTGCTGGCTGGTGGTTGTGTCCCAAAGTAGGGCATGTGTTATGAGAAGTGCTGCACGCCAAGAGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR CCA 90 bp | TCACATTTTGGACCTAAAGGGTTCTATCCCCAGCACGAGGCCTCCTaGGCTGGAAACAAGTGGGATTCACGTTACCTAATTTACAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: SHFGPKGFYPQHEAS*AGNKWDSRYLIYRG Trigger: TCCTCTGTAAATTAGGTAACGTGAATCCCACTTGTTTCCAGCCCAGGAGGCCTCGTGCTGGGGATAGAACCCTTTAGGTCCAAAATGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR-3UTR TCA 90 bp | CCCGGTCCATTCGAGGCCAGCAGAGAAGGTTCCAAGTCTCTTGGCGTGCAGCACCAAGGAGGCTCTAAGTaGCCTCATCAGGTGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PGPFEASREGSKSLGVQHQGGSK*PHQVLS Trigger: ACTGAGCACCTGATGAGGTCACTTAGAGCCTCCTTG...GTGCTGCACGCCAAGAGACTTGGAACCTTCTCTGCTGGCCTCGAATGGACCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR CAA 90 bp | ACCACCAGCCAGCAAACAGCTTCAAATCCAGCTCTGAACACTGCTTaGCCCGTGGGTTCTTGTCCTCACTGTGCCCTGGGCATGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TTSQQTASNPALNTA*PVGSCPHCALGMGR Trigger: TCTTCCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAAGCAGTGTTCAGAGCTGGATTTGAAGCTGTTTGCTGGCTGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGGTGTGGCAGAAAGAACATAGCCAGCCCTCCCGGTCCATTCGAGGCCAGAGGTTCCAAGTCTCTTaGCGTGCAGCACTTCTCATA | + |
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Preference number: 2 (lower is better) Translates to: VLVWQKEHSQPSRSIRGQRFQVS*RAALLI Trigger: TATGAGAAGTGCTGCACGCCAAGAGACTTGGAACCT...CTGGCCTCGAATGGACCGGGAGGGCTGGCTATGTTCTTTCTGCCACACCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR-3UTR CCA 90 bp | CCGGGGTCCAATTTCCAGAACTTGGCAGGCTTTCCGAAGGCCATGTTGTCTTCCAGGGCTAAAGCCACGTaGGAGTGGCAGTTGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: PGSNFQNLAGFPKAMLSSRAKAT*EWQLSQ Trigger: CTGTGACAACTGCCACTCCCACGTGGCTTTAGCCCT...GGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAGAACTTGGCAGGCTTTCCGAAGGCCATGTTGTCTTCCTTCTGAAGGTCCTTGGTGCCCAGGGATaGGCACAGAGGCTGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: FPELGRLSEGHVVFLLKVLGAQG*AQRLNQ Trigger: CTGGTTCAGCCTCTGTGCCCATCCCTGGGCACCAAG...GACCTTCAGAAGGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGCAGTTGTCACAGCAGAGATTGTGCATTCGGTGCTTATACTCTTCGGAGCTACCCATGTCTTGGTaGCCAGGGATGGGCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: EWQLSQQRLCIRCLYSSELPMSW*PGMGTE Trigger: CTCTGTGCCCATCCCTGGGCACCAAGACATGGGTAG...CTCCGAAGAGTATAAGCACCGAATGCACAATCTCTGCTGTGACAACTGCCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTTTGCCCGTGGGTTCTTGTCCTCACTGTGCCCTGGGCATGGGAAGAGTAACACTGCCTGAGGGGTaGGGAATAAAAGAATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TALPVGSCPHCALGMGRVTLPEG*GIKELG Trigger: TCCCAATTCTTTTATTCCCCACCCCTCAGGCAGTGT...TACTCTTCCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR-3UTR CCA 90 bp | TTAGCGGTGATGAGGCACACACTGTGCTGGTGTGGCAGAAAGAACATAGCCAGCACACATGCCCTACTTTaGGACACAACCACCAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LAVMRHTLCWCGRKNIASTHALL*DTTTSQ Trigger: CTGGCTGGTGGTTGTGTCCCAAAGTAGGGCATGTGT...GCTGGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR-3UTR CCA 90 bp | ATTGAAGACGAGACTGACGGTCAGGATAATGCCGAGGAGAAGGACAAAGGGCAGAGGGCTAAAGCCACGTaGGAGTGGCAGTTGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: IEDETDGQDNAEEKDKGQRAKAT*EWQLSQ Trigger: CTGTGACAACTGCCACTCCCACGTGGCTTTAGCCCT...CTGCCCTTTGTCCTTCTCCTCGGCATTATCCTGACCGTCAGTCTCGTCTTCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137622.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGGGAGTGGCAGTTGTCACAGCAGAGATTGTGCATTCGGTGCTTATACTCTTGAAGGTCCAAAGATGTaGTTCCGGGATGGTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: RGSGSCHSRDCAFGAYTLEGPKM*FRDGLT Trigger: AGTCAGACCATCCCGGAACCACATCTTTGGACCTTC...AAGAGTATAAGCACCGAATGCACAATCTCTGCTGTGACAACTGCCACTCCCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCACAAAGGCTCCAACACTGACATACTTCCCATAAATGAGGCAGAAGCAGCATCACCATGTTCCAGTTaGTGCTGTTGTTGTAACGCA | + |
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Preference number: 2 (lower is better) Translates to: LHKGSNTDILPINEAEAASPCSS*CCCCNA Trigger: TGCGTTACAACAACAGCACCAACTGGAACATGGTGA...TGCTGCTTCTGCCTCATTTATGGGAAGTATGTCAGTGTTGGAGCCTTTGTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000134781.8 ENSMUST00000137622.8 ENSMUST00000139030.2 |
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| 3UTR-3UTR CAA 90 bp | CCCGGTCCATTCGAGGCCAGCAGAGAAGGTTCCAAGTCTCTTGGCGTGCAGCACTTTGCCCGTGGGTTCTaGTCCTCACTGTGCCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGPFEASREGSKSLGVQHFARGF*SSLCPG Trigger: CCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAA...GTGCTGCACGCCAAGAGACTTGGAACCTTCTCTGCTGGCCTCGAATGGACCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | ATACTCTTCGGAGGCATCGTGCACAGCCGTGTCCCATaGATTGGGCCCACTCGCATACACCTGTCCGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ILFGGIVHSRVP*IGPTRIHLSGV Trigger: GACCCCGGACAGGTGTATGCGAGTGGGCCCAATGCATGGGACACGGCTGTGCACGATGCCTCCGAAGAGTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR CCA 72 bp | CTTCGGAGGCATCGTGCACAGCCGTGTCCCATGCATTaGGCCCACTCGCATACACCTGTCCGGGGTCCAATT | + |
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Preference number: 3 (lower is better) Translates to: LRRHRAQPCPMH*AHSHTPVRGPI Trigger: AATTGGACCCCGGACAGGTGTATGCGAGTGGGCCCAATGCATGGGACACGGCTGTGCACGATGCCTCCGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR GCA 72 bp | AAGGGAAGGAAGGCCTTCCCAGGATGGCACTGGGAATaGCACAAGGGTGAGGTCTCAGGCCCAGGGAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: KGRKAFPGWHWE*HKGEVSGPGRK Trigger: CTTTCTCCCTGGGCCTGAGACCTCACCCTTGTGGCATTCCCAGTGCCATCCTGGGAAGGCCTTCCTTCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | CCAGGGCCCACATTAGCGGTGATGAGGCACACACTGTaGTGGTGTGGCAGAAAGAACATAGCCAGCCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PGPTLAVMRHTL*WCGRKNIASPP Trigger: GGGAGGGCTGGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGCTAATGTGGGCCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR CCA 72 bp | GGGCCCACATTAGCGGTGATGAGGCACACACTGTGCTaGTGTGGCAGAAAGAACATAGCCAGCCCTCCCGGT | + |
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Preference number: 3 (lower is better) Translates to: GPTLAVMRHTLC*CGRKNIASPPG Trigger: ACCGGGAGGGCTGGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGCTAATGTGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | GAACACTGCTTTGCCCGTGGGTTCTTGTCCTCACTGTaGCCTGGGCATGGGAAGAGTAGCCCAGTGATGGTG | + |
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Preference number: 3 (lower is better) Translates to: EHCFARGFLSSL*PGHGKSSPVMV Trigger: CACCATCACTGGGCTACTCTTCCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAAGCAGTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR-3UTR CAA 90 bp | GCGGTGATGAGGCACACACTGTGCTGGTGTGGCAGAAAGAACATAGCCAGCCCTGCTCTGAACACTGCTTaGCCCGTGGGTTCTTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: AVMRHTLCWCGRKNIASPALNTA*PVGSCP Trigger: AGGACAAGAACCCACGGGCAAAGCAGTGTTCAGAGC...AGGGCTGGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | TTGTGCATTCGGTGCTTATACTCTTCGGAGGCATCGTaGACAGCCGTGTCCCATGCATTGGGCCCACTCGCA | + |
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Preference number: 3 (lower is better) Translates to: LCIRCLYSSEAS*TAVSHALGPLA Trigger: TGCGAGTGGGCCCAATGCATGGGACACGGCTGTGCACGATGCCTCCGAAGAGTATAAGCACCGAATGCACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR TCA 72 bp | CTCAGGCCCAGGGAGAAAGGACAAGGAGGCTCTAAGTaGCCTCATCAGGTGCTCAGTATCGGCACTTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: LRPREKGQGGSK*PHQVLSIGTSV Trigger: GACAGAAGTGCCGATACTGAGCACCTGATGAGGTCACTTAGAGCCTCCTTGTCCTTTCTCCCTGGGCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | GCCACGTGGGAGTGGCAGTTGTCACAGCAGAGATTGTaGATTCGGTGCTTATACTCTTCGGAGGCATCGTGC | + |
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Preference number: 3 (lower is better) Translates to: ATWEWQLSQQRL*IRCLYSSEASC Trigger: GCACGATGCCTCCGAAGAGTATAAGCACCGAATGCACAATCTCTGCTGTGACAACTGCCACTCCCACGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR CCA 72 bp | CACATTAGCGGTGATGAGGCACACACTGTGCTGGTGTaGCAGAAAGAACATAGCCAGCCCTCCCGGTCCATT | + |
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Preference number: 3 (lower is better) Translates to: HISGDEAHTVLV*QKEHSQPSRSI Trigger: AATGGACCGGGAGGGCTGGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGCTAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | CAGCCAGCAAACAGCTTCAAATCCAGCTCTGAACACTaGTTTGCCCGTGGGTTCTTGTCCTCACTGTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: QPANSFKSSSEH*FARGFLSSLCP Trigger: AGGGCACAGTGAGGACAAGAACCCACGGGCAAAGCAGTGTTCAGAGCTGGATTTGAAGCTGTTTGCTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | TTACCTAATTTACAGAGGACCCACTCTGCACGTAAGTaGCCTCAGCCCTTGCTAGCCAGGGCCCACATTAGC | + |
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Preference number: 3 (lower is better) Translates to: LPNLQRTHSARK*PQPLLARAHIS Trigger: GCTAATGTGGGCCCTGGCTAGCAAGGGCTGAGGGCACTTACGTGCAGAGTGGGTCCTCTGTAAATTAGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR-3UTR CAA 90 bp | CAGAGATTGTGCATTCGGTGCTTATACTCTTCGGAGGCATCGTGCACAGCCGTGTCCAATTTCCAGAACTaGGCAGGCTTTCCGAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: QRLCIRCLYSSEASCTAVSNFQN*AGFPKA Trigger: GGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGA...CACGGCTGTGCACGATGCCTCCGAAGAGTATAAGCACCGAATGCACAATCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR TCA 72 bp | CAACCACCAGCCAGCAAACAGCTTCAAATCCAGCTCTaGACACTGCTTTGCCCGTGGGTTCTTGTCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: QPPASKQLQIQL*TLLCPWVLVLT Trigger: AGTGAGGACAAGAACCCACGGGCAAAGCAGTGTTCAGAGCTGGATTTGAAGCTGTTTGCTGGCTGGTGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | AGAAAGGACAAGGAGGCTCTAAGTGACCTCATCAGGTaGTCAGTATCGGCACTTCTGTCCCAAGTCCTGACC | + |
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Preference number: 3 (lower is better) Translates to: RKDKEALSDLIR*SVSALLSQVLT Trigger: GGTCAGGACTTGGGACAGAAGTGCCGATACTGAGCACCTGATGAGGTCACTTAGAGCCTCCTTGTCCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | CCAAGTCTCTTGGCGTGCAGCACTTCTCATAACACATaGCCTACTTTGGGACACAACCACCAGCCAGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: PSLLACSTSHNT*PTLGHNHQPAN Trigger: GTTTGCTGGCTGGTGGTTGTGTCCCAAAGTAGGGCATGTGTTATGAGAAGTGCTGCACGCCAAGAGACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR GCA 72 bp | GGCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTaGTGTTGTTGTAACGCATCAGGTTCAGGGCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: GRSSRASPCSSW*CCCNASGSGLK Trigger: CTTTAGCCCTGAACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000134781.8 ENSMUST00000137622.8 |
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| 3UTR CCA 72 bp | TCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCATGTTGTCTTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: SHTPVRGPISRT*QAFRRPCCLPS Trigger: AGAAGGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGATTGTGCATTCGGTGCTTATACTCTTCGGAGGCATCGTGCACAGCCGTGTGGTCTGACTCCACTCTaGATCTACCCTACCCATGTC | + |
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Preference number: 3 (lower is better) Translates to: RDCAFGAYTLRRHRAQPCGLTPL*IYPTHV Trigger: GACATGGGTAGGGTAGATCAAGAGTGGAGTCAGACC...ACACGGCTGTGCACGATGCCTCCGAAGAGTATAAGCACCGAATGCACAATCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| 3UTR CCA 72 bp | TGGCGTGCAGCACTTCTCATAACACATGCCCTACTTTaGGACACAACCACCAGCCAGCAAACAGCTTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: WRAALLITHALL*DTTTSQQTASN Trigger: ATTTGAAGCTGTTTGCTGGCTGGTGGTTGTGTCCCAAAGTAGGGCATGTGTTATGAGAAGTGCTGCACGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| 3UTR CAA 72 bp | CAGAGGACCCACTCTGCACGTAAGTGCCCTCAGCCCTaGCTAGCCAGGGCCCACATTAGCGGTGATGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: QRTHSARKCPQP*LARAHISGDEA Trigger: TGCCTCATCACCGCTAATGTGGGCCCTGGCTAGCAAGGGCTGAGGGCACTTACGTGCAGAGTGGGTCCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| CDS-3UTR GCA 90 bp | TTGCCCGTGGGTTCTTGTCCTCACTGTGCCCTGGGCATGGGAAGAGTAGCCCAGCACAGCCGTGTCCCATaGATTGGGCCCACTCGCATA | + |
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Preference number: 4 (lower is better) Translates to: LPVGSCPHCALGMGRVAQHSRVP*IGPTRI Trigger: TATGCGAGTGGGCCCAATGCATGGGACACGGCTGTG...CTGGGCTACTCTTCCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGAATGCCACAAGGGTGAGGTCTCAGGCCCAGGGAGAAAGGACAAGGAGGCCGTGTCCCATGCATTaGGCCCACTCGCATACACCT | + |
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Preference number: 4 (lower is better) Translates to: TGNATRVRSQAQGERTRRPCPMH*AHSHTP Trigger: AGGTGTATGCGAGTGGGCCCAATGCATGGGACACGG...CCTCCTTGTCCTTTCTCCCTGGGCCTGAGACCTCACCCTTGTGGCATTCCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| CDS-3UTR GCA 90 bp | CCCGGTCCATTCGAGGCCAGCAGAGAAGGTTCCAAGTCTCTTGGCGTGCAGCACGTCACGAATGACCCCTaGAGATGTGCAGATGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PGPFEASREGSKSLGVQHVTNDP*RCADAH Trigger: ATGGGCATCTGCACATCTGCAGGGGTCATTCGTGAC...GTGCTGCACGCCAAGAGACTTGGAACCTTCTCTGCTGGCCTCGAATGGACCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| CDS-3UTR GCA 90 bp | CCCATAAATGAGGCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTTGCCTCTGGCCACACTaGCCTCCTGGCCTGTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: PINEAEAAERHHVPVGAVCLWPH*PPGLSE Trigger: TTCGGACAGGCCAGGAGGGCAGTGTGGCCAGAGGCA...AACAGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGCCTCATTTATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGGTGTGGCAGAAAGAACATAGCCAGCCCTCCCGGTCCATTCGAGGCCAGGTGCAGATGCCCATGTaGCCAATGATGGGGAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: VLVWQKEHSQPSRSIRGQVQMPM*PMMGKN Trigger: GTTTTTCCCCATCATTGGCCACATGGGCATCTGCAC...CTGGCCTCGAATGGACCGGGAGGGCTGGCTATGTTCTTTCTGCCACACCAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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| CDS-3UTR GCA 90 bp | CTACTTTGGGACACAACCACCAGCCAGCAAACAGCTTCAAATCCAGCTCTGAACCCGGACCCGTGGTACTaGTTCATGTCCGTCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLWDTTTSQQTASNPALNPDPWY*FMSVSA Trigger: GGCCGAGACGGACATGAAGCAGTACCACGGGTCCGG...GTTCAGAGCTGGATTTGAAGCTGTTTGCTGGCTGGTGGTTGTGTCCCAAAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTCACCGGACCCGTGGTACTaGTTCATGTCCGTCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRASPCSSWCCCCNASGSPDPWY*FMSVSA Trigger: GGCCGAGACGGACATGAAGCAGTACCACGGGTCCGG...TGAACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCACAGCCGTGTCCCATaGATTGGGCCCACTCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: EAEAAERHHVPVGAVVVTHSRVP*IGPTRI Trigger: TATGCGAGTGGGCCCAATGCATGGGACACGGCTGTG...CGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR CCA 90 bp | ACATTAGCGGTGATGAGGCACACACTGTGCTGGTGTGGCAGAAAGAACATAGCCACGCCACCGGACCCGTaGTACTGCTTCATGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLAVMRHTLCWCGRKNIATPPDP*YCFMSV Trigger: GACGGACATGAAGCAGTACCACGGGTCCGGTGGCGT...GGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGCTAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTCAGGGACGCCACCGGACCCGTaGTACTGCTTCATGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RASPCSSWCCCCNASGSGTPPDP*YCFMSV Trigger: GACGGACATGAAGCAGTACCACGGGTCCGGTGGCGT...CCCTGAACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTACGCCACCGGACCCGTaGTACTGCTTCATGTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAERHHVPVGAVVVTHQVTPPDP*YCFMSV Trigger: GACGGACATGAAGCAGTACCACGGGTCCGGTGGCGT...AACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCATGGGAAGAGTAGCCCAGTGATGGTGGCAGGAAATGCTCTAAGGGAAAGGGCTAAAGCCACGTaGGAGTGGCAGTTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGHGKSSPVMVAGNALRERAKAT*EWQLSQ Trigger: CTGTGACAACTGCCACTCCCACGTGGCTTTAGCCCT...TTCCCTTAGAGCATTTCCTGCCACCATCACTGGGCTACTCTTCCCATGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| 3UTR CAA 72 bp | AAATCCAGCTCTGAACACTGCTTTGCCCGTGGGTTCTaGTCCTCACTGTGCCCTGGGCATGGGAAGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSSSEHCFARGF*SSLCPGHGKSS Trigger: GCTACTCTTCCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAAGCAGTGTTCAGAGCTGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| 3UTR CAA 72 bp | CAGCAAACAGCTTCAAATCCAGCTCTGAACACTGCTTaGCCCGTGGGTTCTTGTCCTCACTGTGCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QQTASNPALNTA*PVGSCPHCALG Trigger: GCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAAGCAGTGTTCAGAGCTGGATTTGAAGCTGTTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTCACAGCCGTGTCCCATaGATTGGGCCCACTCGCATA | + |
|
Preference number: 4 (lower is better) Translates to: AAERHHVPVGAVVVTHQVHSRVP*IGPTRI Trigger: TATGCGAGTGGGCCCAATGCATGGGACACGGCTGTG...AACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCCATAAATGAGGCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTTCTTCGGAGGCATCGTaGACAGCCGTGTCCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPINEAEAAERHHVPVGASSEAS*TAVSHA Trigger: TGCATGGGACACGGCTGTGCACGATGCCTCCGAAGA...AGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGCCTCATTTATGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATTCTTCGGAGGCATCGTaGACAGCCGTGTCCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEAAERHHVPVGAVVVTHSSEAS*TAVSHA Trigger: TGCATGGGACACGGCTGTGCACGATGCCTCCGAAGA...ATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCCCGTGGGTTCTTGTCCTCACTGTGCCCTGGGCATGGGAAGAGTAGCCCCATGTTCCAGTTGGTaGTGTTGTTGTAACGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPVGSCPHCALGMGRVAPCSSW*CCCNAS Trigger: TGATGCGTTACAACAACAGCACCAACTGGAACATGG...GGCTACTCTTCCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CCA 90 bp | CCCATAAATGAGGCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTCCGTGTCCCATGCATTaGGCCCACTCGCATACACCT | + |
|
Preference number: 4 (lower is better) Translates to: PINEAEAAERHHVPVGAVPCPMH*AHSHTP Trigger: AGGTGTATGCGAGTGGGCCCAATGCATGGGACACGG...AACAGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGCCTCATTTATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| 3UTR CAA 72 bp | CTCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTaGGCAGGCTTTCCGAAGGCCATGTTGTCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAYTCPGSNFQN*AGFPKAMLSSF Trigger: GAAGGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAAGGCTCCAACACTGACATACTTCCCATAAATGAGGCAGAAGCAGCACCGGACCCGTGGTACTaGTTCATGTCCGTCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHKGSNTDILPINEAEAAPDPWY*FMSVSA Trigger: GGCCGAGACGGACATGAAGCAGTACCACGGGTCCGG...TGCTGCTTCTGCCTCATTTATGGGAAGTATGTCAGTGTTGGAGCCTTTGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR GCA 90 bp | ACACATGCCCTACTTTGGGACACAACCACCAGCCAGCAAACAGCTTCAAATCCATCTTCGGAGGCATCGTaGACAGCCGTGTCCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: THALLWDTTTSQQTASNPSSEAS*TAVSHA Trigger: TGCATGGGACACGGCTGTGCACGATGCCTCCGAAGA...TGGATTTGAAGCTGTTTGCTGGCTGGTGGTTGTGTCCCAAAGTAGGGCATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCCGTGGGTTCTTGTCCTCACTGTGCCCTGGGCATGGGAAGAGTAGCCCAGTCACAGCAGAGATTGTaGATTCGGTGCTTATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVGSCPHCALGMGRVAQSQQRL*IRCLYS Trigger: AGAGTATAAGCACCGAATGCACAATCTCTGCTGTGA...CTGGGCTACTCTTCCCATGCCCAGGGCACAGTGAGGACAAGAACCCACGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CCA 90 bp | ACTGGGAATGCCACAAGGGTGAGGTCTCAGGCCCAGGGAGAAAGGACAAGGAGGTCACCATGTTCCAGTTaGTGCTGTTGTTGTAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGNATRVRSQAQGERTRRSPCSS*CCCCNA Trigger: TGCGTTACAACAACAGCACCAACTGGAACATGGTGA...CCTCCTTGTCCTTTCTCCCTGGGCCTGAGACCTCACCCTTGTGGCATTCCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CCA 90 bp | GCCACGTGGGAGTGGCAGTTGTCACAGCAGAGATTGTGCATTCGGTGCTTATACGCCACACTGCCCTCCTaGCCTGTCCGAAACAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ATWEWQLSQQRLCIRCLYATLPS*PVRNKI Trigger: TATTTTGTTTCGGACAGGCCAGGAGGGCAGTGTGGC...GTATAAGCACCGAATGCACAATCTCTGCTGTGACAACTGCCACTCCCACGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
||
| 3UTR CAA 72 bp | AAAGCCACGTGGGAGTGGCAGTTGTCACAGCAGAGATaGTGCATTCGGTGCTTATACTCTTCGGAGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KATWEWQLSQQR*CIRCLYSSEAS Trigger: CGATGCCTCCGAAGAGTATAAGCACCGAATGCACAATCTCTGCTGTGACAACTGCCACTCCCACGTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
||
| CDS-3UTR CCA 90 bp | GAGATTGTGCATTCGGTGCTTATACTCTTCGGAGGCATCGTGCACAGCCGTGTCGTGCAGATGCCCATGTaGCCAATGATGGGGAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EIVHSVLILFGGIVHSRVVQMPM*PMMGKN Trigger: GTTTTTCCCCATCATTGGCCACATGGGCATCTGCAC...GACACGGCTGTGCACGATGCCTCCGAAGAGTATAAGCACCGAATGCACAATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAEAAERHHVPVGAVVVTPISRT*QAFRRP Trigger: TGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGG...CGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139030.2 |
||
| CDS-3UTR CCA 90 bp | ATAAATGAGGCAGAAGCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTCCGTGTCCCATGCATTaGGCCCACTCGCATACACCT | + |
|
Preference number: 4 (lower is better) Translates to: INEAEAAERHHVPVGAVVPCPMH*AHSHTP Trigger: AGGTGTATGCGAGTGGGCCCAATGCATGGGACACGG...AACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGCTTCTGCCTCATTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR CCA 90 bp | ACATTAGCGGTGATGAGGCACACACTGTGCTGGTGTGGCAGAAAGAACATAGCCAAAGCCACGTGGGAGTaGCAGTTGTCACAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TLAVMRHTLCWCGRKNIAKATWE*QLSQQR Trigger: TCTCTGCTGTGACAACTGCCACTCCCACGTGGCTTT...GGCTATGTTCTTTCTGCCACACCAGCACAGTGTGTGCCTCATCACCGCTAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTAAAGCCACGTGGGAGTaGCAGTTGTCACAGCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAERHHVPVGAVVVTHQVKATWE*QLSQQR Trigger: TCTCTGCTGTGACAACTGCCACTCCCACGTGGCTTT...AACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139030.2 |
||
| CDS-3UTR GCA 90 bp | CGTGGGAGTGGCAGTTGTCACAGCAGAGATTGTGCATTCGGTGCTTATACTCTTGTCACGAATGACCCCTaGAGATGTGCAGATGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSGSCHSRDCAFGAYTLVTNDP*RCADAH Trigger: ATGGGCATCTGCACATCTGCAGGGGTCATTCGTGAC...AAGAGTATAAGCACCGAATGCACAATCTCTGCTGTGACAACTGCCACTCCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
||
| CDS-3UTR CCA 90 bp | ACATGCCCTACTTTGGGACACAACCACCAGCCAGCAAACAGCTTCAAATCCAGCCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TCPTLGHNHQPANSFKSSPISRT*QAFRRP Trigger: TGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGG...GCTGGATTTGAAGCTGTTTGCTGGCTGGTGGTTGTGTCCCAAAGTAGGGCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| 3UTR CAA 72 bp | ATCAGGTTCAGGGCTAAAGCCACGTGGGAGTGGCAGTaGTCACAGCAGAGATTGTGCATTCGGTGCTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: IRFRAKATWEWQ*SQQRLCIRCLY Trigger: GTATAAGCACCGAATGCACAATCTCTGCTGTGACAACTGCCACTCCCACGTGGCTTTAGCCCTGAACCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134781.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTTCACAGCAGAGATTGTaGATTCGGTGCTTATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAERHHVPVGAVVVTHQVSQQRL*IRCLYS Trigger: AGAGTATAAGCACCGAATGCACAATCTCTGCTGTGA...AACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139030.2 |
||
| CDS GCA 90 bp | CGGCTCCGCTCCACGTCCATGACAACGCCACCGGACCCGTGGTACTaGTTCATGTCCGTCTCGGCCCCCGTCGGCGTTTCTACTTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLRSTSMTTPPDPWY*FMSVSAPVGVSTSA Trigger: GGCGGAAGTAGAAACGCCGACGGGGGCCGAGACGGACATGAAGCAGTACCACGGGTCCGGTGGCGTTGTCATGGACGTGGAGCGGAGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105907.9 ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS CCA 90 bp | GGGAAGCGGCTCCGCTCCACGTCCATGACAACGCCACCGGACCCGTaGTACTGCTTCATGTCCGTCTCGGCCCCCGTCGGCGTTTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: GKRLRSTSMTTPPDP*YCFMSVSAPVGVST Trigger: AGTAGAAACGCCGACGGGGGCCGAGACGGACATGAAGCAGTACCACGGGTCCGGTGGCGTTGTCATGGACGTGGAGCGGAGCCGCTTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105907.9 ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS TCA 90 bp | GTGTCCACACCACGCAGTAGGGGAAGCGGCTCCGCTCCACGTCCATaGCAACGCCACCGGACCCGTGGTACTGCTTCATGTCCGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSTPRSRGSGSAPRP*QRHRTRGTASCPSR Trigger: CCGAGACGGACATGAAGCAGTACCACGGGTCCGGTGGCGTTGTCATGGACGTGGAGCGGAGCCGCTTCCCCTACTGCGTGGTGTGGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105907.9 ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS CCA 90 bp | TGGGCCCACTCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCATGTTGTCTTCGTGAGCACCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WAHSHTPVRGPISRT*QAFRRPCCLREHRD Trigger: ATCCCGGTGCTCACGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGAGTGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139030.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGGAATGCCACAAGGGTGAGGTCTCAGGCCCAGGGAGAAAGGACAAGGAGGTCCAATTTCCAGAACTaGGCAGGCTTTCCGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGNATRVRSQAQGERTRRSNFQN*AGFPKA Trigger: GGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGA...CCTCCTTGTCCTTTCTCCCTGGGCCTGAGACCTCACCCTTGTGGCATTCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CAA 90 bp | TCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTCAGGGCTAAAGGCCGTGTCCCATGCATaGGGCCCACTCGCATACACC | + |
|
Preference number: 5 (lower is better) Translates to: SPCSSWCCCCNASGSGLKAVSHA*GPLAYT Trigger: GGTGTATGCGAGTGGGCCCAATGCATGGGACACGGC...CTTTAGCCCTGAACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137622.8 |
||
| CDS CCA 90 bp | TGGGCCCACTCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCATGTTGTCTTCCGAAACAAAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: WAHSHTPVRGPISRT*QAFRRPCCLPKQNR Trigger: CCTATTTTGTTTCGGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGAGTGGGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCTCTGACAAGTTATTCACATTTTGGACCTAAAGGGTTCTATCCCCAGCACGCCGTGTCCCATGCATaGGGCCCACTCGCATACACC | + |
|
Preference number: 5 (lower is better) Translates to: AALTSYSHFGPKGFYPQHAVSHA*GPLAYT Trigger: GGTGTATGCGAGTGGGCCCAATGCATGGGACACGGC...GTGCTGGGGATAGAACCCTTTAGGTCCAAAATGTGAATAACTTGTCAGAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS-3UTR CAA 90 bp | CTTCACAAAGGCTCCAACACTGACATACTTCCCATAAATGAGGCAGAAGCAGCAGCCGTGTCCCATGCATaGGGCCCACTCGCATACACC | + |
|
Preference number: 5 (lower is better) Translates to: LHKGSNTDILPINEAEAAAVSHA*GPLAYT Trigger: GGTGTATGCGAGTGGGCCCAATGCATGGGACACGGC...TGCTGCTTCTGCCTCATTTATGGGAAGTATGTCAGTGTTGGAGCCTTTGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGAGCGTCACCATGTTCCAGTTGGTGCTGTTGTTGTAACGCATCAGGTTTCCAATTTCCAGAACTaGGCAGGCTTTCCGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAERHHVPVGAVVVTHQVSNFQN*AGFPKA Trigger: GGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGA...AACCTGATGCGTTACAACAACAGCACCAACTGGAACATGGTGACGCTCTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139030.2 |
||
| CDS CCA 72 bp | CTCCGCTCCACGTCCATGACAACGCCACCGGACCCGTaGTACTGCTTCATGTCCGTCTCGGCCCCCGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRSTSMTTPPDP*YCFMSVSAPVG Trigger: GCCGACGGGGGCCGAGACGGACATGAAGCAGTACCACGGGTCCGGTGGCGTTGTCATGGACGTGGAGCGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105907.9 ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS TCA 72 bp | CCACGCAGTAGGGGAAGCGGCTCCGCTCCACGTCCATaGCAACGCCACCGGACCCGTGGTACTGCTTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSRGSGSAPRP*QRHRTRGTASC Trigger: ACATGAAGCAGTACCACGGGTCCGGTGGCGTTGTCATGGACGTGGAGCGGAGCCGCTTCCCCTACTGCGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105907.9 ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS GCA 72 bp | TCCACGTCCATGACAACGCCACCGGACCCGTGGTACTaGTTCATGTCCGTCTCGGCCCCCGTCGGCGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: STSMTTPPDPWY*FMSVSAPVGVS Trigger: AGAAACGCCGACGGGGGCCGAGACGGACATGAAGCAGTACCACGGGTCCGGTGGCGTTGTCATGGACGTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000105907.9 ENSMUST00000137622.8 ENSMUST00000139030.2 |
||
| CDS CCA 72 bp | TCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCATGTTGTCTTCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SHTPVRGPISRT*QAFRRPCCLRE Trigger: CTCACGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139030.2 |
||
| CDS CAA 72 bp | CTCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTaGGCAGGCTTTCCGAAGGCCATGTTGTCTTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LAYTCPGSNFQN*AGFPKAMLSSE Trigger: TTCGGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
||
| CDS CCA 72 bp | TCGCATACACCTGTCCGGGGTCCAATTTCCAGAACTTaGCAGGCTTTCCGAAGGCCATGTTGTCTTCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SHTPVRGPISRT*QAFRRPCCLPK Trigger: TTTCGGAAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105907.9 |
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