Pregenerated sensors for TMEM221 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043664Ensembl transcript IDs: ENSMUST00000052072.8
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCGCATCTCCTCAGGGAGTGCCGGGGAGTTGAAGTCTAAGACTTaGGCCTTCTTCCAGGAACATGGGAGTGGGGTCACGAGACCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VRISSGSAGELKSKT*AFFQEHGSGVTRPG Trigger: CCCAGGTCTCGTGACCCCACTCCCATGTTCCTGGAAGAAGGCTCAAGTCTTAGACTTCAACTCCCCGGCACTCCCTGAGGAGATGCGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR TCA 90 bp | GAGACACACTCAGCCTTGGACCCACAGCCAAACTCCAGCCATCCCTaGAAGCCCCTGGGCTTAGGCTGCTCTGAGCTCCACAGTCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: ETHSALDPQPNSSHP*KPLGLGCSELHSQG Trigger: ACCTTGACTGTGGAGCTCAGAGCAGCCTAAGCCCAGGGGCTTTCAGGGATGGCTGGAGTTTGGCTGTGGGTCCAAGGCTGAGTGTGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR TCA 90 bp | ACCACCTCTGGGCATGTTAGTGTGCAGTTTCCAGGTTGGCTTCAGTaGGGTGGGACAGCCTACCCTAAAGGTGGCAGCATCAGCCCATGG | + |
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Preference number: 1 (lower is better) Translates to: TTSGHVSVQFPGWLQ*GGTAYPKGGSISPW Trigger: CCATGGGCTGATGCTGCCACCTTTAGGGTAGGCTGTCCCACCTCACTGAAGCCAACCTGGAAACTGCACACTAACATGCCCAGAGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR TCA 90 bp | GGCAGCTTTCATCCCCCTCTCTGCTTCTTGACTGAGGAGGTCACATaGCCTGCCGTCTCCTGTTCCTTTGCTGCCATGATGAACCACACC | + |
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Preference number: 1 (lower is better) Translates to: GSFHPPLCFLTEEVT*PAVSCSFAAMMNHT Trigger: GGTGTGGTTCATCATGGCAGCAAAGGAACAGGAGACGGCAGGTCATGTGACCTCCTCAGTCAAGAAGCAGAGAGGGGGATGAAAGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR CCA 90 bp | GTTACAGATAAGGAAACAGACACAGCAAGGAGACACACTCAGCCTTaGACCCACAGCCAAACTCCAGCCATCCCTGAAAGCCCCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VTDKETDTARRHTQP*THSQTPAIPESPWA Trigger: AGCCCAGGGGCTTTCAGGGATGGCTGGAGTTTGGCTGTGGGTCCAAGGCTGAGTGTGTCTCCTTGCTGTGTCTGTTTCCTTATCTGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTCTTCCATTCCCTAAGGAGGCAGACTCCTGCTTCACACGTGTGCCAGCGGGAGTGCCGGGGAGTTaGAGTCTAAGACTTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: GPLPFPKEADSCFTRVPAGVPGS*SLRLEP Trigger: AGGCTCAAGTCTTAGACTTCAACTCCCCGGCACTCC...CGCTGGCACACGTGTGAAGCAGGAGTCTGCCTCCTTAGGGAATGGAAGAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCTAAAGGTGGCAGCATCAGCCCATGGACTGCAGGGATCTGAGGGCAGCTTTGGGCTTAGGCTGCTCTaGGCTCCACAGTCAAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: TLKVAASAHGLQGSEGSFGLRLL*APQSRF Trigger: GAACCTTGACTGTGGAGCTCAGAGCAGCCTAAGCCC...AAAGCTGCCCTCAGATCCCTGCAGTCCATGGGCTGATGCTGCCACCTTTAGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTCCATTCCCTAAGGAGGCAGACTCCTGCTTCACACGTGTGCCAGCGACACTGGGCATGTTAGTGTaGAGTTTCCAGGTTGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PLPFPKEADSCFTRVPATLGMLV*SFQVGF Trigger: GAAGCCAACCTGGAAACTGCACACTAACATGCCCAG...TGTCGCTGGCACACGTGTGAAGCAGGAGTCTGCCTCCTTAGGGAATGGAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATTGTCAACCCAAGCAGATCTAGACTCACTTTAGAGACCACCTCTGGGCATCCAGGAACATGGGAGTaGGGTCACGAGACCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LIVNPSRSRLTLETTSGHPGTWE*GHETWV Trigger: CACCCAGGTCTCGTGACCCCACTCCCATGTTCCTGG...ATGCCCAGAGGTGGTCTCTAAAGTGAGTCTAGATCTGCTTGGGTTGACAATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGGCAGCATCAGCCCATGGACTGCAGGGATCTGAGGGCAGCTTTCATCCCTGTGACAGAAATAATTaGCTAAGACACACAGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: KVAASAHGLQGSEGSFHPCDRNN*LRHTVE Trigger: CTCAACTGTGTGTCTTAGTCAATTATTTCTGTCACA...GGGATGAAAGCTGCCCTCAGATCCCTGCAGTCCATGGGCTGATGCTGCCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATTGTCAACCCAAGCAGATCTAGACTCACTTTAGAGACCACCTCTGGGCATTTGAAGTCTAAGACTTaGGCCTTCTTCCAGGAACAT | + |
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Preference number: 2 (lower is better) Translates to: LIVNPSRSRLTLETTSGHLKSKT*AFFQEH Trigger: ATGTTCCTGGAAGAAGGCTCAAGTCTTAGACTTCAA...ATGCCCAGAGGTGGTCTCTAAAGTGAGTCTAGATCTGCTTGGGTTGACAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR CAA 90 bp | TCAGCCTGCAGCTGGGAGCCAGTTAGTCTTTGCTTCCTAAGTGTCTaGGTCACAGCAACAATACAAGTAGGATACATGGCTAATGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: SACSWEPVSLCFLSV*VTATIQVGYMANVN Trigger: ATTTACATTAGCCATGTATCCTACTTGTATTGTTGCTGTGACCAAGACACTTAGGAAGCAAAGACTAACTGGCTCCCAGCTGCAGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR TCA 72 bp | TCCTCAGGGAGTGCCGGGGAGTTGAAGTCTAAGACTTaGGCCTTCTTCCAGGAACATGGGAGTGGGGTCACG | + |
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Preference number: 3 (lower is better) Translates to: SSGSAGELKSKT*AFFQEHGSGVT Trigger: CGTGACCCCACTCCCATGTTCCTGGAAGAAGGCTCAAGTCTTAGACTTCAACTCCCCGGCACTCCCTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR TCA 72 bp | GGGCATGTTAGTGTGCAGTTTCCAGGTTGGCTTCAGTaGGGTGGGACAGCCTACCCTAAAGGTGGCAGCATC | + |
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Preference number: 3 (lower is better) Translates to: GHVSVQFPGWLQ*GGTAYPKGGSI Trigger: GATGCTGCCACCTTTAGGGTAGGCTGTCCCACCTCACTGAAGCCAACCTGGAAACTGCACACTAACATGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR GCA 72 bp | CATTCCCTAAGGAGGCAGACTCCTGCTTCACACGTGTaGCAGCGACAGCAGGTTAACACTGATTGTCAACCC | + |
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Preference number: 3 (lower is better) Translates to: HSLRRQTPASHV*QRQQVNTDCQP Trigger: GGGTTGACAATCAGTGTTAACCTGCTGTCGCTGGCACACGTGTGAAGCAGGAGTCTGCCTCCTTAGGGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR GCA 72 bp | GGGGGTTCAGCCTGCAGCTGGGAGCCAGTTAGTCTTTaGTTCCTAAGTGTCTTGGTCACAGCAACAATACAA | + |
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Preference number: 3 (lower is better) Translates to: GGSACSWEPVSL*FLSVLVTATIQ Trigger: TTGTATTGTTGCTGTGACCAAGACACTTAGGAAGCAAAGACTAACTGGCTCCCAGCTGCAGGCTGAACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR-3UTR CAA 90 bp | CTGATTGTCAACCCAAGCAGATCTAGACTCACTTTAGAGACCACCTCTGGGCATTGCTTCCTAAGTGTCTaGGTCACAGCAACAATACAA | + |
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Preference number: 3 (lower is better) Translates to: LIVNPSRSRLTLETTSGHCFLSV*VTATIQ Trigger: TTGTATTGTTGCTGTGACCAAGACACTTAGGAAGCA...ATGCCCAGAGGTGGTCTCTAAAGTGAGTCTAGATCTGCTTGGGTTGACAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR GCA 90 bp | CAGCAAGGAGACACACTCAGCCTTGGACCCACAGCCAAACTCCAGCCATCCCTGAAGCTCCGCGCGCCCTaGCTGGAGCTGGAACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QQGDTLSLGPTAKLQPSLKLRAP*LELEQQ Trigger: CTGCTGTTCCAGCTCCAGGCAGGGCGCGCGGAGCTT...CAGGGATGGCTGGAGTTTGGCTGTGGGTCCAAGGCTGAGTGTGTCTCCTTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTTTCCAGGTTGGCTTCAGTGAGGTGGGACAGCCTACCCTAAAGGTGGCATCCGCGCGCCCTGCCTaGAGCTGGAACAGCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CSFQVGFSEVGQPTLKVASARPA*SWNSSC Trigger: GCAGCTGCTGTTCCAGCTCCAGGCAGGGCGCGCGGA...TGCCACCTTTAGGGTAGGCTGTCCCACCTCACTGAAGCCAACCTGGAAACTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR TCA 90 bp | CTGGGCTTAGGCTGCTCTGAGCTCCACAGTCAAGGTTCAAATGTCCGCATCTCCGAACAGGCCAAGCGCTaGGTGCCTGAGGAGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: LGLGCSELHSQGSNVRISEQAKR*VPEEAA Trigger: TGCCGCCTCCTCAGGCACTCAGCGCTTGGCCTGTTC...GGAGATGCGGACATTTGAACCTTGACTGTGGAGCTCAGAGCAGCCTAAGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR GCA 90 bp | CCTACCCTAAAGGTGGCAGCATCAGCCCATGGACTGCAGGGATCTGAGGGCAGCGATGGATGCAGCTGCTaGGCCAGCCTCGATCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: PTLKVAASAHGLQGSEGSDGCSC*ASLDLE Trigger: TTCGAGATCGAGGCTGGCGCAGCAGCTGCATCCATC...GCTGCCCTCAGATCCCTGCAGTCCATGGGCTGATGCTGCCACCTTTAGGGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR TCA 90 bp | TGCAGCTGGGAGCCAGTTAGTCTTTGCTTCCTAAGTGTCTTGGTCACAGCAACAAACTCGGCGCCCAGGTaGCCACAGAGCGCGGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSWEPVSLCFLSVLVTATNSAPR*PQSAAS Trigger: GCTCGCCGCGCTCTGTGGTCACCTGGGCGCCGAGTT...TGTTGCTGTGACCAAGACACTTAGGAAGCAAAGACTAACTGGCTCCCAGCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTTTCCAGGTTGGCTTCAGTGAGGTGGGACAGCCTACCCTAAAGGTGGCAAGGCCAAGCGCTGAGTaGCTGAGGAGGCGGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CSFQVGFSEVGQPTLKVARPSAE*LRRRQS Trigger: TGACTGCCGCCTCCTCAGGCACTCAGCGCTTGGCCT...TGCCACCTTTAGGGTAGGCTGTCCCACCTCACTGAAGCCAACCTGGAAACTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR CCA 90 bp | TGCTCTGAGCTCCACAGTCAAGGTTCAAATGTCCGCATCTCCTCAGGGAGTGCCGGAGACCCCGACGAGTaGCCTGAACAGCCCGGAACA | + |
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Preference number: 4 (lower is better) Translates to: CSELHSQGSNVRISSGSAGDPDE*PEQPGT Trigger: TGTTCCGGGCTGTTCAGGCCACTCGTCGGGGTCTCC...GGCACTCCCTGAGGAGATGCGGACATTTGAACCTTGACTGTGGAGCTCAGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR GCA 90 bp | TGCTCTGAGCTCCACAGTCAAGGTTCAAATGTCCGCATCTCCTCAGGGAGTGCCCAGGATGGATGCAGCTaGTGCGCCAGCCTCGATCTC | + |
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Preference number: 4 (lower is better) Translates to: CSELHSQGSNVRISSGSAQDGCS*CASLDL Trigger: GAGATCGAGGCTGGCGCAGCAGCTGCATCCATCCTG...GGCACTCCCTGAGGAGATGCGGACATTTGAACCTTGACTGTGGAGCTCAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCTTAGGCTGCTCTGAGCTCCACAGTCAAGGTTCAAATGTCCGCATCTCCCACCTGAACCCAGGATaGATGCAGCTGCTGCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGLGCSELHSQGSNVRISHLNPG*MQLLRQ Trigger: CTGGCGCAGCAGCTGCATCCATCCTGGGTTCAGGTG...GGAGATGCGGACATTTGAACCTTGACTGTGGAGCTCAGAGCAGCCTAAGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR CCA 90 bp | CCTACCCTAAAGGTGGCAGCATCAGCCCATGGACTGCAGGGATCTGAGGGCAGCAGTCACAGCCCCTATTaGGGTCTCCGTTTCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: PTLKVAASAHGLQGSEGSSHSPY*GLRFLI Trigger: GATGAGGAAACGGAGACCCCAATAGGGGCTGTGACT...GCTGCCCTCAGATCCCTGCAGTCCATGGGCTGATGCTGCCACCTTTAGGGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR TCA 90 bp | ACCCTAAAGGTGGCAGCATCAGCCCATGGACTGCAGGGATCTGAGGGCAGCTTTAAATGGGACCCTTGGTaGGTCACAGCCCCTATTGGG | + |
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Preference number: 4 (lower is better) Translates to: TLKVAASAHGLQGSEGSFKWDPW*VTAPIG Trigger: CCCAATAGGGGCTGTGACTCACCAAGGGTCCCATTT...AAAGCTGCCCTCAGATCCCTGCAGTCCATGGGCTGATGCTGCCACCTTTAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR CCA 90 bp | CTGGGCTTAGGCTGCTCTGAGCTCCACAGTCAAGGTTCAAATGTCCGCATCTCCCTCATCTTCAAAGGATaGTGGAGACAGCTCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LGLGCSELHSQGSNVRISLIFKG*WRQLPE Trigger: CTCCGGGAGCTGTCTCCACCATCCTTTGAAGATGAG...GGAGATGCGGACATTTGAACCTTGACTGTGGAGCTCAGAGCAGCCTAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR CCA 90 bp | TGCAGTTTCCAGGTTGGCTTCAGTGAGGTGGGACAGCCTACCCTAAAGGTGGCACTCTGCAACCAGATTTaGAGTCTTCTGAAGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CSFQVGFSEVGQPTLKVALCNQI*SLLKAG Trigger: CCCGGCCTTCAGAAGACTCCAAATCTGGTTGCAGAG...TGCCACCTTTAGGGTAGGCTGTCCCACCTCACTGAAGCCAACCTGGAAACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS-3UTR TCA 90 bp | AGTCTTTGCTTCCTAAGTGTCTTGGTCACAGCAACAATACAAGTAGGATACATGCAAGCGCTGAGTGCCTaGGGAGGCGGCAGTCATACA | + |
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Preference number: 4 (lower is better) Translates to: SLCFLSVLVTATIQVGYMQALSA*GGGSHT Trigger: TGTATGACTGCCGCCTCCTCAGGCACTCAGCGCTTG...CATGTATCCTACTTGTATTGTTGCTGTGACCAAGACACTTAGGAAGCAAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| 3UTR CAA 72 bp | AGCTGGGAGCCAGTTAGTCTTTGCTTCCTAAGTGTCTaGGTCACAGCAACAATACAAGTAGGATACATGGCT | + |
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Preference number: 4 (lower is better) Translates to: SWEPVSLCFLSV*VTATIQVGYMA Trigger: AGCCATGTATCCTACTTGTATTGTTGCTGTGACCAAGACACTTAGGAAGCAAAGACTAACTGGCTCCCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 90 bp | TCCGACCTGCCCGGCCCCGGCCCGCGTGCCAACTCGGCGCCCAGGTaGCCACAGAGCGCGGCGAGCAGCAAGCAGCTAAGCCCGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: SDLPGPGPRANSAPR*PQSAASSKQLSPRT Trigger: GGTCCTCGGGCTTAGCTGCTTGCTGCTCGCCGCGCTCTGTGGTCACCTGGGCGCCGAGTTGGCACGCGGGCCGGGGCCGGGCAGGTCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 90 bp | ACCACAGAGCGCGGCGAGCAGCAAGCAGCTAAGCCCGAGGACCTGTaGCAGCGCGGCCAGCGCGGTCGCCAGCGGCAGCAATGCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TTERGEQQAAKPEDL*QRGQRGRQRQQCPS Trigger: GCTGGGGCATTGCTGCCGCTGGCGACCGCGCTGGCCGCGCTGGCACAGGTCCTCGGGCTTAGCTGCTTGCTGCTCGCCGCGCTCTGTGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 90 bp | GCAGTCATACAGAAACCAGTCCGACCTGCCCGGCCCCGGCCCGCGTaGCAACTCGGCGCCCAGGTGACCACAGAGCGCGGCGAGCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: AVIQKPVRPARPRPA*QLGAQVTTERGEQQ Trigger: TTGCTGCTCGCCGCGCTCTGTGGTCACCTGGGCGCCGAGTTGGCACGCGGGCCGGGGCCGGGCAGGTCGGACTGGTTTCTGTATGACTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 90 bp | AGTAGACGGAGACCCCACAGCAGAACAGGCCAAGCGCTGAGTGCCTaGGGAGGCGGCAGTCATACAGAAACCAGTCCGACCTGCCCGGCC | + |
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Preference number: 5 (lower is better) Translates to: SRRRPHSRTGQALSA*GGGSHTETSPTCPA Trigger: GGCCGGGCAGGTCGGACTGGTTTCTGTATGACTGCCGCCTCCTCAGGCACTCAGCGCTTGGCCTGTTCTGCTGTGGGGTCTCCGTCTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 90 bp | CCTGAACAGCCCGGAACAGGGTGTGCGTCATTATCGCCACCAGGATaGGGGCACCTGAACCCAGGATGGATGCAGCTGCTGCGCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: PEQPGTGCASLSPPG*GHLNPGWMQLLRQP Trigger: AGGCTGGCGCAGCAGCTGCATCCATCCTGGGTTCAGGTGCCCTCATCCTGGTGGCGATAATGACGCACACCCTGTTCCGGGCTGTTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 90 bp | TCAAAGGATGGTGGAGACAGCTCCCGGAGACCCCGACGAGTGGCCTaGACAGCCCGGAACAGGGTGTGCGTCATTATCGCCACCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: SKDGGDSSRRPRRVA*TARNRVCVIIATRM Trigger: CATCCTGGTGGCGATAATGACGCACACCCTGTTCCGGGCTGTTCAGGCCACTCGTCGGGGTCTCCGGGAGCTGTCTCCACCATCCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS CCA 90 bp | CATCTTCAAAGGATGGTGGAGACAGCTCCCGGAGACCCCGACGAGTaGCCTGAACAGCCCGGAACAGGGTGTGCGTCATTATCGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: HLQRMVETAPGDPDE*PEQPGTGCASLSPP Trigger: TGGTGGCGATAATGACGCACACCCTGTTCCGGGCTGTTCAGGCCACTCGTCGGGGTCTCCGGGAGCTGTCTCCACCATCCTTTGAAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 90 bp | CTCATCCTGCGGGGGCTGAGCTCTGCAACCAGATTTGGAGTCTTCTaGAGGCCGGGCCGGCTCATCTTCAAAGGATGGTGGAGACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LILRGLSSATRFGVF*RPGRLIFKGWWRQL Trigger: GAGCTGTCTCCACCATCCTTTGAAGATGAGCCGGCCCGGCCTTCAGAAGACTCCAAATCTGGTTGCAGAGCTCAGCCCCCGCAGGATGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS CCA 90 bp | TCTCCGTTTCCTCATCCTGCGGGGGCTGAGCTCTGCAACCAGATTTaGAGTCTTCTGAAGGCCGGGCCGGCTCATCTTCAAAGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: SPFPHPAGAELCNQI*SLLKAGPAHLQRMV Trigger: CACCATCCTTTGAAGATGAGCCGGCCCGGCCTTCAGAAGACTCCAAATCTGGTTGCAGAGCTCAGCCCCCGCAGGATGAGGAAACGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 72 bp | CCCGGCCCCGGCCCGCGTGCCAACTCGGCGCCCAGGTaGCCACAGAGCGCGGCGAGCAGCAAGCAGCTAAGC | + |
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Preference number: 6 (lower is better) Translates to: PGPGPRANSAPR*PQSAASSKQLS Trigger: GCTTAGCTGCTTGCTGCTCGCCGCGCTCTGTGGTCACCTGGGCGCCGAGTTGGCACGCGGGCCGGGGCCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 72 bp | AGCTCCGCGCGCCCTGCCTGGAGCTGGAACAGCAGCTaGGCAGCCAGCGCGACCAGCACCGCGGCCGGGATG | + |
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Preference number: 6 (lower is better) Translates to: SSARPAWSWNSS*AASATSTAAGM Trigger: CATCCCGGCCGCGGTGCTGGTCGCGCTGGCTGCGCAGCTGCTGTTCCAGCTCCAGGCAGGGCGCGCGGAGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 72 bp | CCCGTCGGTGCGTACGCGCCGAAGCTCCGCGCGCCCTaGCTGGAGCTGGAACAGCAGCTGCGCAGCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PVGAYAPKLRAP*LELEQQLRSQR Trigger: GCGCTGGCTGCGCAGCTGCTGTTCCAGCTCCAGGCAGGGCGCGCGGAGCTTCGGCGCGTACGCACCGACGGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 72 bp | CAGAAACCAGTCCGACCTGCCCGGCCCCGGCCCGCGTaGCAACTCGGCGCCCAGGTGACCACAGAGCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: QKPVRPARPRPA*QLGAQVTTERG Trigger: GCCGCGCTCTGTGGTCACCTGGGCGCCGAGTTGGCACGCGGGCCGGGGCCGGGCAGGTCGGACTGGTTTCTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 72 bp | GCTGCGCAGCCAGCGCGACCAGCACCGCGGCCGGGATaGCCAGTAGGGTCATCGCGGCCAGTACCCGACCTC | + |
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Preference number: 6 (lower is better) Translates to: AAQPARPAPRPG*PVGSSRPVPDL Trigger: GAGGTCGGGTACTGGCCGCGATGACCCTACTGGGCATCCCGGCCGCGGTGCTGGTCGCGCTGGCTGCGCAGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 72 bp | GGGTCTCCGTTTCCTCATCCTGCGGGGGCTGAGCTCTaGAACCAGATTTGGAGTCTTCTGAAGGCCGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GSPFPHPAGAEL*NQIWSLLKAGP Trigger: CGGCCCGGCCTTCAGAAGACTCCAAATCTGGTTGCAGAGCTCAGCCCCCGCAGGATGAGGAAACGGAGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS CCA 72 bp | AGGATGGTGGAGACAGCTCCCGGAGACCCCGACGAGTaGCCTGAACAGCCCGGAACAGGGTGTGCGTCATTA | + |
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Preference number: 6 (lower is better) Translates to: RMVETAPGDPDE*PEQPGTGCASL Trigger: TAATGACGCACACCCTGTTCCGGGCTGTTCAGGCCACTCGTCGGGGTCTCCGGGAGCTGTCTCCACCATCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 72 bp | AGACCCCACAGCAGAACAGGCCAAGCGCTGAGTGCCTaGGGAGGCGGCAGTCATACAGAAACCAGTCCGACC | + |
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Preference number: 6 (lower is better) Translates to: RPHSRTGQALSA*GGGSHTETSPT Trigger: GGTCGGACTGGTTTCTGTATGACTGCCGCCTCCTCAGGCACTCAGCGCTTGGCCTGTTCTGCTGTGGGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 72 bp | CCCGGAACAGGGTGTGCGTCATTATCGCCACCAGGATaGGGGCACCTGAACCCAGGATGGATGCAGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGTGCASLSPPG*GHLNPGWMQLL Trigger: CAGCAGCTGCATCCATCCTGGGTTCAGGTGCCCTCATCCTGGTGGCGATAATGACGCACACCCTGTTCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS GCA 72 bp | ACGGAGACCCCACAGCAGAACAGGCCAAGCGCTGAGTaGCTGAGGAGGCGGCAGTCATACAGAAACCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TETPQQNRPSAE*LRRRQSYRNQS Trigger: GGACTGGTTTCTGTATGACTGCCGCCTCCTCAGGCACTCAGCGCTTGGCCTGTTCTGCTGTGGGGTCTCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS CCA 72 bp | CGCCAGCCTCGATCTCGAACAGCAGCAGGGCATAGATaGCCAGTGCTGCTAAGTAGACGGAGACCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: RQPRSRTAAGHR*PVLLSRRRPHS Trigger: GCTGTGGGGTCTCCGTCTACTTAGCAGCACTGGCCATCTATGCCCTGCTGCTGTTCGAGATCGAGGCTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 72 bp | GTAGACGGAGACCCCACAGCAGAACAGGCCAAGCGCTaGGTGCCTGAGGAGGCGGCAGTCATACAGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: VDGDPTAEQAKR*VPEEAAVIQKP Trigger: TGGTTTCTGTATGACTGCCGCCTCCTCAGGCACTCAGCGCTTGGCCTGTTCTGCTGTGGGGTCTCCGTCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 72 bp | CGGGGGCTGAGCTCTGCAACCAGATTTGGAGTCTTCTaGAGGCCGGGCCGGCTCATCTTCAAAGGATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RGLSSATRFGVF*RPGRLIFKGWW Trigger: CCACCATCCTTTGAAGATGAGCCGGCCCGGCCTTCAGAAGACTCCAAATCTGGTTGCAGAGCTCAGCCCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS CCA 72 bp | CCTCATCCTGCGGGGGCTGAGCTCTGCAACCAGATTTaGAGTCTTCTGAAGGCCGGGCCGGCTCATCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PHPAGAELCNQI*SLLKAGPAHLQ Trigger: TTGAAGATGAGCCGGCCCGGCCTTCAGAAGACTCCAAATCTGGTTGCAGAGCTCAGCCCCCGCAGGATGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS CCA 72 bp | TCAGAAATGGGACCCTTGGTGAGTCACAGCCCCTATTaGGGTCTCCGTTTCCTCATCCTGCGGGGGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SEMGPLVSHSPY*GLRFLILRGLS Trigger: GCTCAGCCCCCGCAGGATGAGGAAACGGAGACCCCAATAGGGGCTGTGACTCACCAAGGGTCCCATTTCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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| CDS TCA 72 bp | CCTATTGGGGTCTCCGTTTCCTCATCCTGCGGGGGCTaGGCTCTGCAACCAGATTTGGAGTCTTCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PIGVSVSSSCGG*ALQPDLESSEG Trigger: GCCTTCAGAAGACTCCAAATCTGGTTGCAGAGCTCAGCCCCCGCAGGATGAGGAAACGGAGACCCCAATAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052072.8 |
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