Pregenerated sensors for TMEM220 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050270Ensembl transcript IDs: ENSMUST00000061786.6, ENSMUST00000079077.12
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGTGCTCTGCCCACAGGTCAAGTGCTCGATAACAACCTGTGTATaGCCTGTTGGACTGTGTCACCCTACAGAGCTCTCCTCCCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: QVLCPQVKCSITTCV*PVGLCHPTELSSPV Trigger: CACAGGGGAGGAGAGCTCTGTAGGGTGACACAGTCCAACAGGGCATACACAGGTTGTTATCGAGCACTTGACCTGTGGGCAGAGCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR GCA 90 bp | TTGGTCACCCTGCCCACAGGTCAAGTGCTCTGCCCACAGGTCAAGTaGTCGATAACAACCTGTGTATGCCCTGTTGGACTGTGTCACCCT | + |
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Preference number: 1 (lower is better) Translates to: LVTLPTGQVLCPQVK*SITTCVCPVGLCHP Trigger: AGGGTGACACAGTCCAACAGGGCATACACAGGTTGTTATCGAGCACTTGACCTGTGGGCAGAGCACTTGACCTGTGGGCAGGGTGACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR CCA 90 bp | CTGCCCACAGGTCAAGTGCTCGATAACAACCTGTGTATGCCCTGTTaGACTGTGTCACCCTACAGAGCTCTCCTCCCCTGTGGTCACTTC | + |
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Preference number: 1 (lower is better) Translates to: LPTGQVLDNNLCMPC*TVSPYRALLPCGHF Trigger: GAAGTGACCACAGGGGAGGAGAGCTCTGTAGGGTGACACAGTCCAACAGGGCATACACAGGTTGTTATCGAGCACTTGACCTGTGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR CCA 90 bp | CATAGTGCTAAAGCTGGATTCAAACTCAAGTTTCTGCTCATTGCCTaGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: HSAKAGFKLKFLLIA*SSAVAEETSGDSAP Trigger: GGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGAATCCAGCTTTAGCACTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR GCA 90 bp | TTGCCCCATCACATAGTGCTAAAGCTGGATTCAAACTCAAGTTTCTaGTCATTGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LPHHIVLKLDSNSSF*SLPGPVLLQKRPLE Trigger: CTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGAATCCAGCTTTAGCACTATGTGATGGGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR TCA 90 bp | TATAGCCTCAGCCCCCTCTCACTCTTACTCCCTTTGGAACTCAAGTaGGCTTCATCTTCTCAGAGTGCCTTCAACAATAGTTTGGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: YSLSPLSLLLPLELK*ASSSQSAFNNSLVV Trigger: CACAACCAAACTATTGTTGAAGGCACTCTGAGAAGATGAAGCTCACTTGAGTTCCAAAGGGAGTAAGAGTGAGAGGGGGCTGAGGCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR TCA 90 bp | CATAGCGCCAGACCAACACCAACAGTCCATACCAAAATTTGCAGTTaGAGAAGATCCATACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: HSARPTPTVHTKICS*RRSIHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGATCTTCTTCAACTGCAAATTTTGGTATGGACTGTTGGTGTTGGTCTGGCGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACACGATCCCATGCACACTTAACTTTTCCTGGCAGTTGACTCCCCTGGTCCAGTGCTGTTaGAGAAGAGACCTCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: THTHTIPCTLNFSWQLTPLVQCC*RRDLWR Trigger: TCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAG...GGGAGTCAACTGCCAGGAAAAGTTAAGTGTGCATGGGATCGTGTGTGTGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTATAGCCTCAGCCCCCTCTCACTCTTACTCCCTTTGGAACTCAAGTGAGCAAGTTTCTGCTCATTaGCTGGTCCAGTGCTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: LVIASAPSHSYSLWNSSEQVSAH*LVQCCC Trigger: GCAACAGCACTGGACCAGGCAATGAGCAGAAACTTG...CTCACTTGAGTTCCAAAGGGAGTAAGAGTGAGAGGGGGCTGAGGCTATAACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGCCCACAGGTCAAGTGCTCTGCCCACAGGTCAAGTGCTCGATAACAACCATCCTACTTTATATGTaGGGAAATATGTACCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TLPTGQVLCPQVKCSITTILLYM*GNMYQE Trigger: CTCCTGGTACATATTTCCTCACATATAAAGTAGGAT...GGTTGTTATCGAGCACTTGACCTGTGGGCAGAGCACTTGACCTGTGGGCAGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGAGATTCGTGGGTTTGCCCCATCACATAGTGCTAAAGCTGGATTCAAACCAAGTTTCTGCTCATTaGCTGGTCCAGTGCTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: TRRFVGLPHHIVLKLDSNQVSAH*LVQCCC Trigger: GCAACAGCACTGGACCAGGCAATGAGCAGAAACTTG...GTTTGAATCCAGCTTTAGCACTATGTGATGGGGCAAACCCACGAATCTCCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR CCA 90 bp | ATGTACCAGGAGATTCGTGGGTTTGCCCCATCACATAGTGCTAAAGCTGGATTCTGCAGAAGAGACCTCTaGAGACTCAGCTCCCAATTC | + |
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Preference number: 2 (lower is better) Translates to: MYQEIRGFAPSHSAKAGFCRRDL*RLSSQF Trigger: GAATTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCA...GAATCCAGCTTTAGCACTATGTGATGGGGCAAACCCACGAATCTCCTGGTACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR CAA 90 bp | CATCACATAGTGCTAAAGCTGGATTCAAACTCAAGTTTCTGCTCATaGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: HHIVLKLDSNSSFCS*PGPVLLQKRPLETQ Trigger: CTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGAATCCAGCTTTAGCACTATGTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR GCA 90 bp | ATAGCCTCAGCCCCCTCTCACTCTTACTCCCTTTGGAACTCAAGTGAGCTTCATTCAAACTCAAGTTTCTaGTCATTGCCTGGTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: IASAPSHSYSLWNSSELHSNSSF*SLPGPV Trigger: CACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGA...ATGAAGCTCACTTGAGTTCCAAAGGGAGTAAGAGTGAGAGGGGGCTGAGGCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR CCA 90 bp | GTGGGTTTGCCCCATCACATAGTGCTAAAGCTGGATTCAAACTCAAGTTTCTGCTGCAGAAGAGACCTCTaGAGACTCAGCTCCCAATTC | + |
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Preference number: 2 (lower is better) Translates to: VGLPHHIVLKLDSNSSFCCRRDL*RLSSQF Trigger: GAATTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCA...GCAGAAACTTGAGTTTGAATCCAGCTTTAGCACTATGTGATGGGGCAAACCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR GCA 90 bp | TACTCCCTTTGGAACTCAAGTGAGCTTCATCTTCTCAGAGTGCCTTCAACAATACTGGTCCAGTGCTGTTaGAGAAGAGACCTCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YSLWNSSELHLLRVPSTILVQCC*RRDLWR Trigger: TCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAG...TATTGTTGAAGGCACTCTGAGAAGATGAAGCTCACTTGAGTTCCAAAGGGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR CCA 90 bp | TACTCCCTTTGGAACTCAAGTGAGCTTCATCTTCTCAGAGTGCCTTCAACAATATTTCTGCTCATTGCCTaGTCCAGTGCTGTTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YSLWNSSELHLLRVPSTIFLLIA*SSAVAE Trigger: TTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAA...TATTGTTGAAGGCACTCTGAGAAGATGAAGCTCACTTGAGTTCCAAAGGGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR TCA 90 bp | TTTCTACTTTCATTTGGTTCACCTGCCCTGGAATTTTTCTGGGTTCAGTACAGCATTAAGATTAGTTTTTaGACCTCCCTCCATGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: FLLSFGSPALEFFWVQYSIKISF*TSLHVS Trigger: GCTGACATGGAGGGAGGTTCAAAAACTAATCTTAAT...GCTGTACTGAACCCAGAAAAATTCCAGGGCAGGTGAACCAAATGAAAGTAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR TCA 90 bp | TTTGCTGTACATGAAATGAGGCAATCAGATCTCAGGGGCCAGTATTTAGCATTTATTAAGATTAGTTTTTaGACCTCCCTCCATGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: FAVHEMRQSDLRGQYLAFIKISF*TSLHVS Trigger: GCTGACATGGAGGGAGGTTCAAAAACTAATCTTAAT...AAATGCTAAATACTGGCCCCTGAGATCTGATTGCCTCATTTCATGTACAGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCCCCTGTGGTCACTTCAACATTCATTAAAAAGATGTATAGATTTCCATTTCATTTGGTTCACCTaGCCTGGAATTTTTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SPPLWSLQHSLKRCIDFHFIWFT*PGIFLG Trigger: ACCCAGAAAAATTCCAGGGCAGGTGAACCAAATGAA...ATGGAAATCTATACATCTTTTTAATGAATGTTGAAGTGACCACAGGGGAGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR-3UTR CCA 90 bp | TGGAATTTTTCTGGGTTCAGTACAGCTGAGCCAGTTAAGTACATTAAGATTAGTCACTCTTACTCCCTTTaGAACTCAAGTGAGCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: WNFSGFSTAEPVKYIKISHSYSL*NSSELH Trigger: ATGAAGCTCACTTGAGTTCCAAAGGGAGTAAGAGTG...ACTAATCTTAATGTACTTAACTGGCTCAGCTGTACTGAACCCAGAAAAATTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR GCA 72 bp | TGCCCACAGGTCAAGTGCTCGATAACAACCTGTGTATaGCCTGTTGGACTGTGTCACCCTACAGAGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: CPQVKCSITTCV*PVGLCHPTELS Trigger: GGAGAGCTCTGTAGGGTGACACAGTCCAACAGGGCATACACAGGTTGTTATCGAGCACTTGACCTGTGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR CCA 72 bp | GGTCAAGTGCTCGATAACAACCTGTGTATGCCCTGTTaGACTGTGTCACCCTACAGAGCTCTCCTCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GQVLDNNLCMPC*TVSPYRALLPC Trigger: ACAGGGGAGGAGAGCTCTGTAGGGTGACACAGTCCAACAGGGCATACACAGGTTGTTATCGAGCACTTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR-3UTR CAA 90 bp | ATGTACCAGGAGATTCGTGGGTTTGCCCCATCACATAGTGCTAAAGCTGGATTCCCTGGTCCAGTGCTGTaGCAGAAGAGACCTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: MYQEIRGFAPSHSAKAGFPGPVL*QKRPLE Trigger: CTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGG...GAATCCAGCTTTAGCACTATGTGATGGGGCAAACCCACGAATCTCCTGGTACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR GCA 72 bp | ACTCAAGTTTCTGCTCATTGCCTGGTCCAGTGCTGTTaGAGAAGAGACCTCTGGAGACTCAGCTCCCAATTC | + |
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Preference number: 3 (lower is better) Translates to: TQVSAHCLVQCC*RRDLWRLSSQF Trigger: GAATTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR CAA 90 bp | GTCACCCTGCCCACAGGTCAAGTGCTCTGCCCACAGGTCAAGTGCTCGATAACAAATTTCTACTTTCATTaGGTTCACCTGCCCTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: VTLPTGQVLCPQVKCSITNFYFH*VHLPWN Trigger: ATTCCAGGGCAGGTGAACCAAATGAAAGTAGAAATT...TGTTATCGAGCACTTGACCTGTGGGCAGAGCACTTGACCTGTGGGCAGGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR GCA 72 bp | ATTCAAACTCAAGTTTCTGCTCATTGCCTGGTCCAGTaGTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: IQTQVSAHCLVQ*CCRRDLWRLSS Trigger: GGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR CCA 72 bp | AAAGCTGGATTCAAACTCAAGTTTCTGCTCATTGCCTaGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: KAGFKLKFLLIA*SSAVAEETSGD Trigger: GTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGAATCCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR TCA 72 bp | AGCCCCCTCTCACTCTTACTCCCTTTGGAACTCAAGTaGGCTTCATCTTCTCAGAGTGCCTTCAACAATAGT | + |
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Preference number: 3 (lower is better) Translates to: SPLSLLLPLELK*ASSSQSAFNNS Trigger: ACTATTGTTGAAGGCACTCTGAGAAGATGAAGCTCACTTGAGTTCCAAAGGGAGTAAGAGTGAGAGGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR TCA 72 bp | GAGGCAATCAGATCTCAGGGGCCAGTATTTAGCATTTaGATACATAGCGCCAGACCAACACCAACAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: EAIRSQGPVFSI*IHSARPTPTVH Trigger: ATGGACTGTTGGTGTTGGTCTGGCGCTATGTATTCAAATGCTAAATACTGGCCCCTGAGATCTGATTGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR GCA 72 bp | CACATAGTGCTAAAGCTGGATTCAAACTCAAGTTTCTaGTCATTGCCTGGTCCAGTGCTGTTGCAGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: HIVLKLDSNSSF*SLPGPVLLQKR Trigger: TCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGAATCCAGCTTTAGCACTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR TCA 72 bp | AGACCAACACCAACAGTCCATACCAAAATTTGCAGTTaGAGAAGATCCATACACACACACACACACACACAC | + |
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Preference number: 3 (lower is better) Translates to: RPTPTVHTKICS*RRSIHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTATGGATCTTCTTCAACTGCAAATTTTGGTATGGACTGTTGGTGTTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| 3UTR TCA 72 bp | ACAGCTGAGCCAGTTAAGTACATTAAGATTAGTTTTTaGACCTCCCTCCATGTCAGCATGAGGCTGGTTATA | + |
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Preference number: 3 (lower is better) Translates to: TAEPVKYIKISF*TSLHVSMRLVI Trigger: TATAACCAGCCTCATGCTGACATGGAGGGAGGTTCAAAAACTAATCTTAATGTACTTAACTGGCTCAGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR-3UTR CAA 90 bp | TTCTACTTTCATTTGGTTCACCTGCCCTGGAATTTTTCTGGGTTCAGTACAGCTGCCTTCAACAATAGTTaGGTTGTGGTAACTAATGAG | + |
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Preference number: 3 (lower is better) Translates to: FYFHLVHLPWNFSGFSTAAFNNS*VVVTNE Trigger: CTCATTAGTTACCACAACCAAACTATTGTTGAAGGC...AGCTGTACTGAACCCAGAAAAATTCCAGGGCAGGTGAACCAAATGAAAGTAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR TCA 72 bp | ATTGGCAAGCAAAGTTTACATAATATTTGCTGTACATaGAATGAGGCAATCAGATCTCAGGGGCCAGTATTT | + |
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Preference number: 3 (lower is better) Translates to: IGKQSLHNICCT*NEAIRSQGPVF Trigger: AAATACTGGCCCCTGAGATCTGATTGCCTCATTTCATGTACAGCAAATATTATGTAAACTTTGCTTGCCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR TCA 90 bp | CATTGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCCAACGAAGAAAGCTGCCATaGGTGCGTTGCAGGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HCLVQCCCRRDLWRLSSQRRKLP*VRCRPA Trigger: GGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCG...TTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR TCA 90 bp | CACACACACACGATCCCATGCACACTTAACTTTTCCTGGCAGTTGACTCCCTGCCGAAGAAAGCTGCCATaGGTGCGTTGCAGGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HTHTIPCTLNFSWQLTPCRRKLP*VRCRPA Trigger: GGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCG...GCAGGGAGTCAACTGCCAGGAAAAGTTAAGTGTGCATGGGATCGTGTGTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR TCA 90 bp | TGCTCATTGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCGGGCCATCCATGCTGTaGCAATCACCAGGCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: CSLPGPVLLQKRPLETQLGPSML*QSPGQT Trigger: TGTCTGGCCTGGTGATTGTCACAGCATGGATGGCCC...GAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR GCA 90 bp | CTGGTTATAGCCTCAGCCCCCTCTCACTCTTACTCCCTTTGGAACTCAAGTGAGGAAAGCTGCCATGAGTaGGTTGCAGGCCCGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: LVIASAPSHSYSLWNSSEESCHE*VAGPPQ Trigger: TTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTC...CTCACTTGAGTTCCAAAGGGAGTAAGAGTGAGAGGGGGCTGAGGCTATAACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR GCA 90 bp | CATTGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCCAACACCACCCACAACTCTaGATCTGGATCGTTTACCTG | + |
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Preference number: 4 (lower is better) Translates to: HCLVQCCCRRDLWRLSSQHHPQL*IWIVYL Trigger: CAGGTAAACGATCCAGATGCAGAGTTGTGGGTGGTG...TTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR GCA 90 bp | CATTGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCCAAAAGCAGGGTAAGCACTaGTGGGATCATGTACACCAC | + |
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Preference number: 4 (lower is better) Translates to: HCLVQCCCRRDLWRLSSQKQGKH*WDHVHH Trigger: GTGGTGTACATGATCCCAGCAGTGCTTACCCTGCTT...TTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR TCA 90 bp | AGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCCAATTCTTATCTGACCACCTGGATTCTTGGATaGGCTGTGGCACAGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SAVAEETSGDSAPNSYLTTWILG*AVAQGH Trigger: ATGGCCCTGTGCCACAGCTCATCCAAGAATCCAGGT...GGTCAGATAAGAATTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR CCA 90 bp | CTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCCAATTCTTACAGGGTAAGCACTGCTaGGATCATGTACACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LVQCCCRRDLWRLSSQFLQGKHC*DHVHHH Trigger: GTGGTGGTGTACATGATCCCAGCAGTGCTTACCCTG...TAAGAATTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR CCA 90 bp | CTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCCAATTCTTATTCTTGGATGAGCTGTaGCACAGGGCCATCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LVQCCCRRDLWRLSSQFLFLDEL*HRAIHA Trigger: AGCATGGATGGCCCTGTGCCACAGCTCATCCAAGAA...TAAGAATTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR CCA 90 bp | ATAGCCTCAGCCCCCTCTCACTCTTACTCCCTTTGGAACTCAAGTGAGCTTCATTGTCTTGCAGTGAGTTaGCCAGGAGGACCGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: IASAPSHSYSLWNSSELHCLAVS*PGGPHL Trigger: GAGATGCGGTCCTCCTGGCCAACTCACTGCAAGACA...ATGAAGCTCACTTGAGTTCCAAAGGGAGTAAGAGTGAGAGGGGGCTGAGGCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR GCA 90 bp | TGTGAGGAAATATGTACCAGGAGATTCGTGGGTTTGCCCCATCACATAGTGCTAGAAAGCTGCCATGAGTaGGTTGCAGGCCCGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: CEEICTRRFVGLPHHIVLESCHE*VAGPPQ Trigger: TTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTC...TAGCACTATGTGATGGGGCAAACCCACGAATCTCCTGGTACATATTTCCTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR CCA 90 bp | TGTGAGGAAATATGTACCAGGAGATTCGTGGGTTTGCCCCATCACATAGTGCTATGTCTTGCAGTGAGTTaGCCAGGAGGACCGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: CEEICTRRFVGLPHHIVLCLAVS*PGGPHL Trigger: GAGATGCGGTCCTCCTGGCCAACTCACTGCAAGACA...TAGCACTATGTGATGGGGCAAACCCACGAATCTCCTGGTACATATTTCCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR CAA 72 bp | AACTCAAGTTTCTGCTCATTGCCTGGTCCAGTGCTGTaGCAGAAGAGACCTCTGGAGACTCAGCTCCCAATT | + |
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Preference number: 4 (lower is better) Translates to: NSSFCSLPGPVL*QKRPLETQLPI Trigger: AATTGGGAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR CAA 72 bp | GTGCTAAAGCTGGATTCAAACTCAAGTTTCTGCTCATaGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VLKLDSNSSFCS*PGPVLLQKRPL Trigger: CAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCAGAAACTTGAGTTTGAATCCAGCTTTAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR GCA 90 bp | ACCAGGAGATTCGTGGGTTTGCCCCATCACATAGTGCTAAAGCTGGATTCAAACACAGCAATAGCCAAGTaGATTCTTCCACCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TRRFVGLPHHIVLKLDSNTAIAK*ILPPPG Trigger: TCCAGGTGGTGGAAGAATGCACTTGGCTATTGCTGT...GTTTGAATCCAGCTTTAGCACTATGTGATGGGGCAAACCCACGAATCTCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR GCA 90 bp | ATGTACCAGGAGATTCGTGGGTTTGCCCCATCACATAGTGCTAAAGCTGGATTCACAGCAATAGCCAAGTaGATTCTTCCACCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: MYQEIRGFAPSHSAKAGFTAIAK*ILPPPG Trigger: TCCAGGTGGTGGAAGAATGCACTTGGCTATTGCTGT...GAATCCAGCTTTAGCACTATGTGATGGGGCAAACCCACGAATCTCCTGGTACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR TCA 90 bp | ATATTTGCTGTACATGAAATGAGGCAATCAGATCTCAGGGGCCAGTATTTAGCAACCTGGATTCTTGGATaGGCTGTGGCACAGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IFAVHEMRQSDLRGQYLATWILG*AVAQGH Trigger: ATGGCCCTGTGCCACAGCTCATCCAAGAATCCAGGT...TGCTAAATACTGGCCCCTGAGATCTGATTGCCTCATTTCATGTACAGCAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR GCA 90 bp | TTTCTACTTTCATTTGGTTCACCTGCCCTGGAATTTTTCTGGGTTCAGTACAGCAAGCAGGGTAAGCACTaGTGGGATCATGTACACCAC | + |
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Preference number: 4 (lower is better) Translates to: FLLSFGSPALEFFWVQYSKQGKH*WDHVHH Trigger: GTGGTGTACATGATCCCAGCAGTGCTTACCCTGCTT...GCTGTACTGAACCCAGAAAAATTCCAGGGCAGGTGAACCAAATGAAAGTAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR CCA 90 bp | TTAATTTCTACTTTCATTTGGTTCACCTGCCCTGGAATTTTTCTGGGTTCAGTATTCTTGGATGAGCTGTaGCACAGGGCCATCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LISTFIWFTCPGIFLGSVFLDEL*HRAIHA Trigger: AGCATGGATGGCCCTGTGCCACAGCTCATCCAAGAA...TACTGAACCCAGAAAAATTCCAGGGCAGGTGAACCAAATGAAAGTAGAAATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| 3UTR CAA 72 bp | CAGACCAACACCAACAGTCCATACCAAAATTTGCAGTaGAAGAAGATCCATACACACACACACACACACACA | + |
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Preference number: 4 (lower is better) Translates to: QTNTNSPYQNLQ*KKIHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTATGGATCTTCTTCAACTGCAAATTTTGGTATGGACTGTTGGTGTTGGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR GCA 90 bp | TTAATTTCTACTTTCATTTGGTTCACCTGCCCTGGAATTTTTCTGGGTTCAGTATGTCACCCACAACTCTaGATCTGGATCGTTTACCTG | + |
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Preference number: 4 (lower is better) Translates to: LISTFIWFTCPGIFLGSVCHPQL*IWIVYL Trigger: CAGGTAAACGATCCAGATGCAGAGTTGTGGGTGACA...TACTGAACCCAGAAAAATTCCAGGGCAGGTGAACCAAATGAAAGTAGAAATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079077.12 |
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| CDS GCA 90 bp | GTTTACCTGCACCACAGCGGCCAGGGCGAAGAAAGCTGCCATGAGTaGGTTGCAGGCCCGCCACAAGCCGGGAGCCCAAGTAGCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: VYLHHSGQGEESCHE*VAGPPQAGSPSSHC Trigger: GCAGTGGCTACTTGGGCTCCCGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGGTAAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS GCA 90 bp | ATCTGGATCGTTTACCTGCACCACAGCGGCCAGGGCGAAGAAAGCTaGCATGAGTGCGTTGCAGGCCCGCCACAAGCCGGGAGCCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: IWIVYLHHSGQGEES*HECVAGPPQAGSPS Trigger: ACTTGGGCTCCCGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGGTAAACGATCCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS CCA 90 bp | AAGCACTGCTGGGATCATGTACACCACCACCCACAACTCTGCATCTaGATCGTTTACCTGCACCACAGCGGCCAGGGCGAAGAAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: KHCWDHVHHHPQLCI*IVYLHHSGQGEESC Trigger: GCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGGTAAACGATCCAGATGCAGAGTTGTGGGTGGTGGTGTACATGATCCCAGCAGTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR CAA 90 bp | TGCTCATTGCCTGGTCCAGTGCTGTTGCAGAAGAGACCTCTGGAGACTCAGCTCCCACCACCTGGATTCTaGGATGAGCTGTGGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: CSLPGPVLLQKRPLETQLPPPGF*DELWHR Trigger: CCTGTGCCACAGCTCATCCAAGAATCCAGGTGGTGG...GAGCTGAGTCTCCAGAGGTCTCTTCTGCAACAGCACTGGACCAGGCAATGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS GCA 90 bp | ATCATGTACACCACCACCCACAACTCTGCATCTGGATCGTTTACCTaGACCACAGCGGCCAGGGCGAAGAAAGCTGCCATGAGTGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: IMYTTTHNSASGSFT*TTAARAKKAAMSAL Trigger: CAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGGTAAACGATCCAGATGCAGAGTTGTGGGTGGTGGTGTACATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS-3UTR CAA 90 bp | TACTCCCTTTGGAACTCAAGTGAGCTTCATCTTCTCAGAGTGCCTTCAACAATAGCTGCCATGAGTGCGTaGCAGGCCCGCCACAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: YSLWNSSELHLLRVPSTIAAMSA*QARHKP Trigger: CGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGC...TATTGTTGAAGGCACTCTGAGAAGATGAAGCTCACTTGAGTTCCAAAGGGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACGATCCCATGCACACTTAACTTTTCCTGGCAGTTGACTCCCCCACCACCTGGATTCTaGGATGAGCTGTGGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: THTHTIPCTLNFSWQLTPPPPGF*DELWHR Trigger: CCTGTGCCACAGCTCATCCAAGAATCCAGGTGGTGG...GGGAGTCAACTGCCAGGAAAAGTTAAGTGTGCATGGGATCGTGTGTGTGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS CCA 90 bp | TACACCACTGTCATGCCCGGTGTAGTCATGGGAAGTGGGAGTCGCTaGTATAAGCTCTCTCTGCAGAAAGACTTTCGTGTCACCCACAAC | + |
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Preference number: 5 (lower is better) Translates to: YTTVMPGVVMGSGSR*YKLSLQKDFRVTHN Trigger: GTTGTGGGTGACACGAAAGTCTTTCTGCAGAGAGAGCTTATACCAGCGACTCCCACTTCCCATGACTACACCGGGCATGACAGTGGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079077.12 |
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| CDS-3UTR CAA 90 bp | TGGAATTTTTCTGGGTTCAGTACAGCTGAGCCAGTTAAGTACATTAAGATTAGTGCTGCCATGAGTGCGTaGCAGGCCCGCCACAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: WNFSGFSTAEPVKYIKISAAMSA*QARHKP Trigger: CGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGC...ACTAATCTTAATGTACTTAACTGGCTCAGCTGTACTGAACCCAGAAAAATTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS-3UTR CAA 90 bp | ACCTGCCCTGGAATTTTTCTGGGTTCAGTACAGCTGAGCCAGTTAAGTACATTACTGTCTTGCAGTGAGTaGGCCAGGAGGACCGCATCT | + |
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Preference number: 5 (lower is better) Translates to: TCPGIFLGSVQLSQLSTLLSCSE*ARRTAS Trigger: AGATGCGGTCCTCCTGGCCAACTCACTGCAAGACAG...TAATGTACTTAACTGGCTCAGCTGTACTGAACCCAGAAAAATTCCAGGGCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS TCA 72 bp | CCTGCACCACAGCGGCCAGGGCGAAGAAAGCTGCCATaGGTGCGTTGCAGGCCCGCCACAAGCCGGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: PAPQRPGRRKLP*VRCRPATSREP Trigger: GGGCTCCCGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS CAA 90 bp | ACCTGCACCACAGCGGCCAGGGCGAAGAAAGCTGCCATGAGTGCGTaGCAGGCCCGCCACAAGCCGGGAGCCCAAGTAGCCACTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TCTTAARAKKAAMSA*QARHKPGAQVATAG Trigger: GCCAGCAGTGGCTACTTGGGCTCCCGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS GCA 72 bp | CACCACAGCGGCCAGGGCGAAGAAAGCTGCCATGAGTaGGTTGCAGGCCCGCCACAAGCCGGGAGCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: HHSGQGEESCHE*VAGPPQAGSPS Trigger: ACTTGGGCTCCCGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS CAA 72 bp | ACAGCGGCCAGGGCGAAGAAAGCTGCCATGAGTGCGTaGCAGGCCCGCCACAAGCCGGGAGCCCAAGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: TAARAKKAAMSA*QARHKPGAQVA Trigger: GGCTACTTGGGCTCCCGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS GCA 72 bp | GTTTACCTGCACCACAGCGGCCAGGGCGAAGAAAGCTaGCATGAGTGCGTTGCAGGCCCGCCACAAGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VYLHHSGQGEES*HECVAGPPQAG Trigger: CCCGGCTTGTGGCGGGCCTGCAACGCACTCATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGGTAAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS GCA 72 bp | ACCACCACCCACAACTCTGCATCTGGATCGTTTACCTaGACCACAGCGGCCAGGGCGAAGAAAGCTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: TTTHNSASGSFT*TTAARAKKAAM Trigger: CATGGCAGCTTTCTTCGCCCTGGCCGCTGTGGTGCAGGTAAACGATCCAGATGCAGAGTTGTGGGTGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061786.6 |
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| CDS TCA 72 bp | CTGCCTTCTTCCTCATTTAGGAGGTTCTGCTTTGCGTaGAGCAAGAAGTGGTACGCCAAGCCGCCAGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LPSSSFRRFCFA*SKKWYAKPPAH Trigger: GTGGGCTGGCGGCTTGGCGTACCACTTCTTGCTTCACGCAAAGCAGAACCTCCTAAATGAGGAAGAAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061786.6 ENSMUST00000079077.12 |
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| CDS CCA 72 bp | AAGAGGATTAAACCCAACAAGCAGGGTAAGCACTGCTaGGATCATGTACACCACTGTCATGCCCGGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: KRIKPNKQGKHC*DHVHHCHARCS Trigger: ACTACACCGGGCATGACAGTGGTGTACATGATCCCAGCAGTGCTTACCCTGCTTGTTGGGTTTAATCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079077.12 |
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