Pregenerated sensors for TMEM219 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060538Ensembl transcript IDs: ENSMUST00000032926.12, ENSMUST00000119781.8, ENSMUST00000120007.8, ENSMUST00000121532.8, ENSMUST00000121612.4, ENSMUST00000134134.3, ENSMUST00000154174.2, ENSMUST00000177004.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAACTTGACCTGTACCTaGCAGCAGAGTGAGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPNLTCT*QQSEAQ Trigger: CTGCGCCTCACTCTGCTGTCAGGTACAGGTCAAGTT...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| 3UTR-3UTR TCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACTTGACCTGTACCTaGCAGCAGAGTGAGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKNLTCT*QQSEAQ Trigger: CTGCGCCTCACTCTGCTGTCAGGTACAGGTCAAGTT...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCGCCCTGCCTGGCAGCTaGCCATGGGGAGCAGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPALPGS*PWGAEG Trigger: CCCCTCTGCTCCCCATGGGCAGCTGCCAGGCAGGGC...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119781.8 ENSMUST00000120007.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACGCCCTGCCTGGCAGCTaGCCATGGGGAGCAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNALPGS*PWGAEG Trigger: CCCCTCTGCTCCCCATGGGCAGCTGCCAGGCAGGGC...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119781.8 ENSMUST00000120007.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCGGGTCTGGGCCTCCGTaGGGTGCCTGCTGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPGSGPP*GACWRT Trigger: TGTCCTCCAGCAGGCACCCCACGGAGGCCCAGACCC...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120007.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCGGCCAGTTGTGTGGGTaGGGAGGAAGCCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPGQLCG*GGSHQG Trigger: GCCTTGGTGGCTTCCTCCTCACCCACACAACTGGCC...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCCCTGGAGTCCTTCCTaGCGCCACTCTGGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPPWSPS*RHSGCD Trigger: GTCACAGCCAGAGTGGCGTCAGGAAGGACTCCAGGG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 51% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCCTCCGTGGGGTGCCTaGTGGAGGACAGTAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPPPWGA*WRTVRE Trigger: CTCCCTTACTGTCCTCCAGCAGGCACCCCACGGAGG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000120007.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGTTGTGCCCTGCCTaGCAGCTGCCCATGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPKLCPA*QLPMGS Trigger: GCTCCCCATGGGCAGCTGCCAGGCAGGGCACAACTT...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119781.8 ENSMUST00000120007.8 |
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| CDS-3UTR TCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGGGCCAGTTGTGTGGGTaGGGAGGAAGCCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKGQLCG*GGSHQG Trigger: GCCTTGGTGGCTTCCTCCTCACCCACACAACTGGCC...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACGGCCAGTTGTGTGGGTaGGGAGGAAGCCACCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNGQLCG*GGSHQG Trigger: GCCTTGGTGGCTTCCTCCTCACCCACACAACTGGCC...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCACGCCACTCTGGCTGTaGCAAGGACAGACTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPTPLWL*QGQTLR Trigger: CCGGAGAGTCTGTCCTTGTCACAGCCAGAGTGGCGT...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCCCTGGAGTCCTTCCTaGCGCCACTCTGGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKPWSPS*RHSGCD Trigger: GTCACAGCCAGAGTGGCGTCAGGAAGGACTCCAGGG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR GCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGTGGGCCTCCGTGGGGTaGCTGCTGGAGGACAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKWASVG*LLEDSK Trigger: CTTACTGTCCTCCAGCAGGCACCCCACGGAGGCCCA...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120007.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACAAGTTGTGCCCTGCCTaGCAGCTGCCCATGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNKLCPA*QLPMGS Trigger: GCTCCCCATGGGCAGCTGCCAGGCAGGGCACAACTT...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119781.8 ENSMUST00000120007.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACACGCCACTCTGGCTGTaGCAAGGACAGACTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNTPLWL*QGQTLR Trigger: CCGGAGAGTCTGTCCTTGTCACAGCCAGAGTGGCGT...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCAGAGCCAGCTCCTCTaGAGTAAGGAGCTCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPQSQLL*SKELGE Trigger: CTCACCGAGCTCCTTACTTCAGAGGAGCTGGCTCTG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCGGAGGCCAGTTGTGTaGGTGAGGAGGAAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKRRPVV*VRRKPP Trigger: TGGTGGCTTCCTCCTCACCCACACAACTGGCCTCCG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCCGTGGGGTGCCTGCTaGAGGACAGTAAGGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKPWGAC*RTVREN Trigger: GTTCTCCCTTACTGTCCTCCAGCAGGCACCCCACGG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120007.8 |
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| CDS-3UTR TCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCTTGCCACGTCCCTGTaGCTGTCTCATTCATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKLATSL*LSHSWG Trigger: GCCCCATGAATGAGACAGTCACAGGGACGTGGCAAG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACCTTGCCACGTCCCTGTaGCTGTCTCATTCATGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNLATSL*LSHSWG Trigger: GCCCCATGAATGAGACAGTCACAGGGACGTGGCAAG...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACCAGAGCCAGCTCCTCTaGAGTAAGGAGCTCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNQSQLL*SKELGE Trigger: CTCACCGAGCTCCTTACTTCAGAGGAGCTGGCTCTG...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCAGAGCCAGCTCCTCTaGAGTAAGGAGCTCGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKQSQLL*SKELGE Trigger: CTCACCGAGCTCCTTACTTCAGAGGAGCTGGCTCTG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR GCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCGGATGGAAGCAGACTaGAGTGGTACAGCAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPRMEAD*SGTAEE Trigger: CTCCTCTGCTGTACCACTGCAGTCTGCTTCCATCCG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCTCCTCACCCATCACTaGGCTCAGGGTAGCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPLLTHH*AQGSIS Trigger: GGAAATGCTACCCTGAGCCCAGTGATGGGTGAGGAG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACCGTGTTCTAGACCAGTaGAACTCTGGGCGCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNRVLDQ*NSGRGW Trigger: CCATCCGCGCCCAGAGTTCCACTGGTCTAGAACACG...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCGTGTTCTAGACCAGTaGAACTCTGGGCGCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKRVLDQ*NSGRGW Trigger: CCATCCGCGCCCAGAGTTCCACTGGTCTAGAACACG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCTCCAACTCCCTCCTCTaGGCAGGATATAGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPSNSLL*AGYRWL Trigger: CAACCACCTATATCCTGCTCAGAGGAGGGAGTTGGA...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR GCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCGGATGGAAGCAGACTaGAGTGGTACAGCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKRMEAD*SGTAEE Trigger: CTCCTCTGCTGTACCACTGCAGTCTGCTTCCATCCG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACGGCACAGACCAAAGGTaGGTGATGAGCCAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNGTDQR*VMSQTE Trigger: CTCTGTCTGGCTCATCACCCACCTTTGGTCTGTGCC...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGGGCACAGACCAAAGGTaGGTGATGAGCCAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKGTDQR*VMSQTE Trigger: CTCTGTCTGGCTCATCACCCACCTTTGGTCTGTGCC...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGGAAACCCAATCCTaGGGAATGTCAGGGCTACGG | + |
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Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPKETQS*GMSGLR Trigger: CCGTAGCCCTGACATTCCCCAGGATTGGGTTTCCTT...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCTCCTCACCCATCACTaGGCTCAGGGTAGCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKLLTHH*AQGSIS Trigger: GGAAATGCTACCCTGAGCCCAGTGATGGGTGAGGAG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACCTCCTCACCCATCACTaGGCTCAGGGTAGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNLLTHH*AQGSIS Trigger: GGAAATGCTACCCTGAGCCCAGTGATGGGTGAGGAG...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACTCCAACTCCCTCCTCTaGGCAGGATATAGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNSNSLL*AGYRWL Trigger: CAACCACCTATATCCTGCTCAGAGGAGGGAGTTGGA...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR TCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGTCCAACTCCCTCCTCTaGGCAGGATATAGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKSNSLL*AGYRWL Trigger: CAACCACCTATATCCTGCTCAGAGGAGGGAGTTGGA...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACGCAGCAGGATCAAAGTaGCACAGACCAAAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNAAGSK*HRPKVG Trigger: ACCCACCTTTGGTCTGTGCCACTTTGATCCTGCTGC...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGGCAGCAGGATCAAAGTaGCACAGACCAAAGGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKAAGSK*HRPKVG Trigger: ACCCACCTTTGGTCTGTGCCACTTTGATCCTGCTGC...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAAGGAAACCCAATCCTaGGGAATGTCAGGGCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKKETQS*GMSGLR Trigger: CCGTAGCCCTGACATTCCCCAGGATTGGGTTTCCTT...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACAAGGAAACCCAATCCTaGGGAATGTCAGGGCTACGG | + |
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Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNKETQS*GMSGLR Trigger: CCGTAGCCCTGACATTCCCCAGGATTGGGTTTCCTT...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCTCCGAAGTTCAAAGTaGTCAGTAAGCCGACGACGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPLRSSK*SVSRRR Trigger: ACGTCGTCGGCTTACTGACCACTTTGAACTTCGGAG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCGGGCACAGACTTAGCTaGCCAAAAGATCTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPGHRLS*PKDLKK Trigger: CTTCTTGAGATCTTTTGGCCAGCTAAGTCTGTGCCC...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACCTCCGAAGTTCAAAGTaGTCAGTAAGCCGACGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNLRSSK*SVSRRR Trigger: ACGTCGTCGGCTTACTGACCACTTTGAACTTCGGAG...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGGGGCACAGACTTAGCTaGCCAAAAGATCTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKGHRLS*PKDLKK Trigger: CTTCTTGAGATCTTTTGGCCAGCTAAGTCTGTGCCC...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACGGGCACAGACTTAGCTaGCCAAAAGATCTCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNGHRLS*PKDLKK Trigger: CTTCTTGAGATCTTTTGGCCAGCTAAGTCTGTGCCC...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACGGTTTTGTTTCTGTCTaGACCATCTCCGAAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNGFVSV*TISEVQ Trigger: TTGAACTTCGGAGATGGTCCAGACAGAAACAAAACC...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGGGTTTTGTTTCTGTCTaGACCATCTCCGAAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKGFVSV*TISEVQ Trigger: TTGAACTTCGGAGATGGTCCAGACAGAAACAAAACC...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCTTGGCTTGGAATGTTTaGGTTTTGTTTCTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPLAWNV*VLFLSG Trigger: TCCAGACAGAAACAAAACCCAAACATTCCAAGCCAA...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCCATGGATCTTGGCTTaGAATGTTTGGGTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPPWILA*NVWVLF Trigger: AAACAAAACCCAAACATTCCAAGCCAAGATCCATGG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGTTGGCTTGGAATGTTTaGGTTTTGTTTCTGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKLAWNV*VLFLSG Trigger: TCCAGACAGAAACAAAACCCAAACATTCCAAGCCAA...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACCCATGGATCTTGGCTTaGAATGTTTGGGTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNPWILA*NVWVLF Trigger: AAACAAAACCCAAACATTCCAAGCCAAGATCCATGG...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCCATGGATCTTGGCTTaGAATGTTTGGGTTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKPWILA*NVWVLF Trigger: AAACAAAACCCAAACATTCCAAGCCAAGATCCATGG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS TCA 90 bp | CCCAATCCTGGGGAATGTCAGGGCTACGGAGGCCAGTTGTGTGGGTaGGGAGGAAGCCACCAAGGCCCAGGCCAGAAAGGCCAAGGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PNPGECQGYGGQLCG*GGSHQGPGQKGQGA Trigger: TGCTCCTTGGCCTTTCTGGCCTGGGCCTTGGTGGCTTCCTCCTCACCCACACAACTGGCCTCCGTAGCCCTGACATTCCCCAGGATTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS CCA 90 bp | GCCAGCTCCTCTGAAGTAAGGAGCTCGGTGAGCACAAGGCGCTCGTaGCTCCAGACCCTGACACACTCCTCACCCATCACTGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSEVRSSVSTRRS*LQTLTHSSPITGLR Trigger: CCTGAGCCCAGTGATGGGTGAGGAGTGTGTCAGGGTCTGGAGCCACGAGCGCCTTGTGCTCACCGAGCTCCTTACTTCAGAGGAGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 |
||
| CDS CCA 90 bp | GAAACCCAATCCTGGGGAATGTCAGGGCTACGGAGGCCAGTTGTGTaGGTGAGGAGGAAGCCACCAAGGCCCAGGCCAGAAAGGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ETQSWGMSGLRRPVV*VRRKPPRPRPERPR Trigger: CCTTGGCCTTTCTGGCCTGGGCCTTGGTGGCTTCCTCCTCACCCACACAACTGGCCTCCGTAGCCCTGACATTCCCCAGGATTGGGTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS CCA 90 bp | TTGACCTGTACTGAAGTAAGGAGCTCGGTGAGCACAAGGCGCTCGTaGCTCCAGACCCTGACACACTCCTCACCCATCACTGGGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTCTEVRSSVSTRRS*LQTLTHSSPITGLR Trigger: CCTGAGCCCAGTGATGGGTGAGGAGTGTGTCAGGGTCTGGAGCCACGAGCGCCTTGTGCTCACCGAGCTCCTTACTTCAGTACAGGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154174.2 ENSMUST00000177004.8 |
||
| CDS TCA 90 bp | TCTGGACCATCTCCGAAGTTCAAAGTGGTCAGTAAGCCGACGACGTaGGGCCCTTGCCACGTCCCTGTGACTGTCTCATTCATGGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SGPSPKFKVVSKPTT*GPCHVPVTVSFMGH Trigger: GTGCCCCATGAATGAGACAGTCACAGGGACGTGGCAAGGGCCTCACGTCGTCGGCTTACTGACCACTTTGAACTTCGGAGATGGTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS TCA 90 bp | AAGTGGTCAGTAAGCCGACGACGTGAGGCCCTTGCCACGTCCCTGTaGCTGTCTCATTCATGGGGCACAGACTTAGCTGGCCAAAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: KWSVSRRREALATSL*LSHSWGTDLAGQKI Trigger: GATCTTTTGGCCAGCTAAGTCTGTGCCCCATGAATGAGACAGTCACAGGGACGTGGCAAGGGCCTCACGTCGTCGGCTTACTGACCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS TCA 90 bp | AATATAGGCAGGTCCCTGGAGTCCTTCCTGACGCCACTCTGGCTGTaGCAAGGACAGACTCTCCGGCAGAGGACCCTGTCAATCCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: NIGRSLESFLTPLWL*QGQTLRQRTLSILS Trigger: AGATAGGATTGACAGGGTCCTCTGCCGGAGAGTCTGTCCTTGTCACAGCCAGAGTGGCGTCAGGAAGGACTCCAGGGACCTGCCTATATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
||
| CDS CCA 90 bp | AGAAAGGCCAAGGAGCAGCAGGATCAAAGTGGCACAGACCAAAGGTaGGTGATGAGCCAGACAGAGATGCAAGTTGTGCCCTGCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RKAKEQQDQSGTDQR*VMSQTEMQVVPCLA Trigger: TGCCAGGCAGGGCACAACTTGCATCTCTGTCTGGCTCATCACCCACCTTTGGTCTGTGCCACTTTGATCCTGCTGCTCCTTGGCCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS TCA 90 bp | CTCACCCATCACTGGGCTCAGGGTAGCATTTCCAACTCCCTCCTCTaGGCAGGATATAGGTGGTTGGCTAGAGGGCAGGACTTTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTHHWAQGSISNSLL*AGYRWLARGQDFWN Trigger: GTTCCAAAAGTCCTGCCCTCTAGCCAACCACCTATATCCTGCTCAGAGGAGGGAGTTGGAAATGCTACCCTGAGCCCAGTGATGGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000154174.2 ENSMUST00000177004.8 |
||
| CDS CCA 90 bp | ATGTTTGGGTTTTGTTTCTGTCTGGACCATCTCCGAAGTTCAAAGTaGTCAGTAAGCCGACGACGTGAGGCCCTTGCCACGTCCCTGTGN | + |
|
Preference number: 5 (lower is better) Translates to: MFGFCFCLDHLRSSK*SVSRRREALATSLX Trigger: NCACAGGGACGTGGCAAGGGCCTCACGTCGTCGGCTTACTGACCACTTTGAACTTCGGAGATGGTCCAGACAGAAACAAAACCCAAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177004.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCGACGACGTGAGGCCCTaGCCACGTCCCTGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPDDVRP*PRPCDC Trigger: ACAGTCACAGGGACGTGGCAAGGGCCTCACGTCGTC...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS CCA 90 bp | CTCCGGCAGAGGACCCTGTCAATCCTATCTGACTACCATGGATCTTaGCTTGGAATGTTTGGGTTTTGTTTCTGTCTGGACCATCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LRQRTLSILSDYHGS*LGMFGFCFCLDHLR Trigger: TCGGAGATGGTCCAGACAGAAACAAAACCCAAACATTCCAAGCCAAGATCCATGGTAGTCAGATAGGATTGACAGGGTCCTCTGCCGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGGACGACGTGAGGCCCTaGCCACGTCCCTGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKDDVRP*PRPCDC Trigger: ACAGTCACAGGGACGTGGCAAGGGCCTCACGTCGTC...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS TCA 90 bp | GTGACAAGGACAGACTCTCCGGCAGAGGACCCTGTCAATCCTATCTaGCTACCATGGATCTTGGCTTGGAATGTTTGGGTTTTGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VTRTDSPAEDPVNPI*LPWILAWNVWVLFL Trigger: CAGAAACAAAACCCAAACATTCCAAGCCAAGATCCATGGTAGTCAGATAGGATTGACAGGGTCCTCTGCCGGAGAGTCTGTCCTTGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
||
| CDS CCA 90 bp | AGGGTAGCATTTCCAACTCCCTCCTCTGAGCAGGATATAGGTGGTTaGCTAGAGGGCAGGACTTTTGGAACACCACTAAAATATAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVAFPTPSSEQDIGG*LEGRTFGTPLKYRQ Trigger: CTGCCTATATTTTAGTGGTGTTCCAAAAGTCCTGCCCTCTAGCCAACCACCTATATCCTGCTCAGAGGAGGGAGTTGGAAATGCTACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCCTTGGCTTGGAATGTTaGGGTTTTGTTTCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSSSLFVIGLLNSEVGPLGLEC*GFVSVW Trigger: CCAGACAGAAACAAAACCCAAACATTCCAAGCCAAG...GGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGCTTGGCTTGGAATGTTaGGGTTTTGTTTCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSLFVIGLLNSEVGPKLGLEC*GFVSVW Trigger: CCAGACAGAAACAAAACCCAAACATTCCAAGCCAAG...CTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTTCACTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACACCATGGATCTTGGCTaGGAATGTTTGGGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLFVIGLLNSEVGPKNTMDLG*ECLGFV Trigger: AACAAAACCCAAACATTCCAAGCCAAGATCCATGGT...GTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAGTGAAGAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 |
||
| CDS TCA 72 bp | GGAGCAGAGGGGTCTGGGCCTCCGTGGGGTGCCTGCTaGAACAACATAAGGCACGGAGCCAGGAACTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAEGSGPPWGAC*NNIRHGARNSG Trigger: GCCCGAGTTCCTGGCTCCGTGCCTTATGTTGTTTCAGCAGGCACCCCACGGAGGCCCAGACCCCTCTGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134134.3 |
||
| CDS TCA 72 bp | GGGGAATGTCAGGGCTACGGAGGCCAGTTGTGTGGGTaGGGAGGAAGCCACCAAGGCCCAGGCCAGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GECQGYGGQLCG*GGSHQGPGQKG Trigger: GCCTTTCTGGCCTGGGCCTTGGTGGCTTCCTCCTCACCCACACAACTGGCCTCCGTAGCCCTGACATTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS TCA 72 bp | AGGTCCCTGGAGTCCTTCCTGACGCCACTCTGGCTGTaGCAAGGACAGACTCTCCGGCAGAGGACCCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLESFLTPLWL*QGQTLRQRTLS Trigger: TGACAGGGTCCTCTGCCGGAGAGTCTGTCCTTGTCACAGCCAGAGTGGCGTCAGGAAGGACTCCAGGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
||
| CDS TCA 72 bp | GTAAGCCGACGACGTGAGGCCCTTGCCACGTCCCTGTaGCTGTCTCATTCATGGGGCACAGACTTAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRRREALATSL*LSHSWGTDLAG Trigger: GCCAGCTAAGTCTGTGCCCCATGAATGAGACAGTCACAGGGACGTGGCAAGGGCCTCACGTCGTCGGCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS CCA 72 bp | ACTGAAGTAAGGAGCTCGGTGAGCACAAGGCGCTCGTaGCTCCAGACCCTGACACACTCCTCACCCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: TEVRSSVSTRRS*LQTLTHSSPIT Trigger: AGTGATGGGTGAGGAGTGTGTCAGGGTCTGGAGCCACGAGCGCCTTGTGCTCACCGAGCTCCTTACTTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154174.2 ENSMUST00000177004.8 |
||
| CDS TCA 72 bp | CACTGGGCTCAGGGTAGCATTTCCAACTCCCTCCTCTaGGCAGGATATAGGTGGTTGGCTAGAGGGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HWAQGSISNSLL*AGYRWLARGQD Trigger: GTCCTGCCCTCTAGCCAACCACCTATATCCTGCTCAGAGGAGGGAGTTGGAAATGCTACCCTGAGCCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000154174.2 ENSMUST00000177004.8 |
||
| CDS CCA 72 bp | CCAGGCCAGAAAGGCCAAGGAGCAGCAGGATCAAAGTaGCACAGACCAAAGGTGGGTGATGAGCCAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGQKGQGAAGSK*HRPKVGDEPDR Trigger: TCTGTCTGGCTCATCACCCACCTTTGGTCTGTGCCACTTTGATCCTGCTGCTCCTTGGCCTTTCTGGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
||
| CDS TCA 72 bp | TCTCCGAAGTTCAAAGTGGTCAGTAAGCCGACGACGTaGGGCCCTTGCCACGTCCCTGTGACTGTCTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SPKFKVVSKPTT*GPCHVPVTVSF Trigger: GAATGAGACAGTCACAGGGACGTGGCAAGGGCCTCACGTCGTCGGCTTACTGACCACTTTGAACTTCGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 |
||
| CDS TCA 72 bp | AAACTCAGAAGTGGGCCCCAAGAACTTGACCTGTACTaGAGTAAGGAGCTCGGTGAGCACAAGGCGCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: KLRSGPQELDLY*SKELGEHKALV Trigger: CACGAGCGCCTTGTGCTCACCGAGCTCCTTACTTCAGTACAGGTCAAGTTCTTGGGGCCCACTTCTGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154174.2 ENSMUST00000177004.8 |
||
| CDS CCA 72 bp | AAGGAGCAGCAGGATCAAAGTGGCACAGACCAAAGGTaGGTGATGAGCCAGACAGAGATGCAAGTTGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: KEQQDQSGTDQR*VMSQTEMQVVP Trigger: GGGCACAACTTGCATCTCTGTCTGGCTCATCACCCACCTTTGGTCTGTGCCACTTTGATCCTGCTGCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000134134.3 |
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| CDS CAA 90 bp | CTTTTTGTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACTaGACCTGTACTGAAGTAAGGAGCTCGGTGAGCACAAGGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LFVIGLLNSEVGPKN*TCTEVRSSVSTRRS Trigger: CGAGCGCCTTGTGCTCACCGAGCTCCTTACTTCAGTACAGGTCAAGTTCTTGGGGCCCACTTCTGAGTTTAGAAGACCTATTACAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000154174.2 ENSMUST00000177004.8 |
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| CDS CCA 72 bp | TTTCCAACTCCCTCCTCTGAGCAGGATATAGGTGGTTaGCTAGAGGGCAGGACTTTTGGAACACCACTAAAA | + |
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Preference number: 6 (lower is better) Translates to: FPTPSSEQDIGG*LEGRTFGTPLK Trigger: TTTTAGTGGTGTTCCAAAAGTCCTGCCCTCTAGCCAACCACCTATATCCTGCTCAGAGGAGGGAGTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
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| CDS CAA 90 bp | GGCAGAGGACCCTGTCAATCCTATCTGACTACCATGGATCTTGGCTaGGAATGTTTGGGTTTTGTTTCTGTCTGGACCATCTCCGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: GRGPCQSYLTTMDLG*ECLGFVSVWTISEV Trigger: AACTTCGGAGATGGTCCAGACAGAAACAAAACCCAAACATTCCAAGCCAAGATCCATGGTAGTCAGATAGGATTGACAGGGTCCTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
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| CDS CCA 72 bp | AGGACCCTGTCAATCCTATCTGACTACCATGGATCTTaGCTTGGAATGTTTGGGTTTTGTTTCTGTCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RTLSILSDYHGS*LGMFGFCFCLD Trigger: GTCCAGACAGAAACAAAACCCAAACATTCCAAGCCAAGATCCATGGTAGTCAGATAGGATTGACAGGGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000032926.12 ENSMUST00000119781.8 ENSMUST00000120007.8 ENSMUST00000121532.8 ENSMUST00000121612.4 ENSMUST00000134134.3 ENSMUST00000177004.8 |
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