Pregenerated sensors for TMEM216 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024667Ensembl transcript IDs: ENSMUST00000025569.9, ENSMUST00000059582.9, ENSMUST00000123788.8, ENSMUST00000145210.8, ENSMUST00000154383.2, ENSMUST00000236561.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCCACTGGCCTCAGGTAGGTGCTCAGCGCCCAAATGTCCGCACTaGGGAAAAACCACACAAACCTTTCCCAGGTTAGCTCGACCTACC | + |
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Preference number: 1 (lower is better) Translates to: VPLASGRCSAPKCPH*GKTTQTFPRLARPT Trigger: GGTAGGTCGAGCTAACCTGGGAAAGGTTTGTGTGGTTTTTCCTCAGTGCGGACATTTGGGCGCTGAGCACCTACCTGAGGCCAGTGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR CCA 90 bp | GTAGGACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTaGAAGCCAAACAAAACTAGAAGGTCCACACAAGGTGCTCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: VGQMYVHRVLWLRFC*KPNKTRRSTQGALA Trigger: GGCCAGAGCACCTTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTACATCTGTCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR CCA 90 bp | AAATGGGTTCTAGATCACCATCTCTTTGAGCAGGATGGGGGCAGGTaGAGCAGCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: KWVLDHHLFEQDGGR*SSVENTHWNQPKSP Trigger: TGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCTGCTCCACCTGCCCCCATCCTGCTCAAAGAGATGGTGATCTAGAACCCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000236561.2 |
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| 3UTR TCA 90 bp | AGCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCACCATTATaGGGCTCTCCATGGTCATGTAGGACAGATGTACGTGCACAGAGT | + |
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Preference number: 1 (lower is better) Translates to: SVENTHWNQPKSPPL*GSPWSCRTDVRAQS Trigger: ACTCTGTGCACGTACATCTGTCCTACATGACCATGGAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR GCA 90 bp | CATGTAGGACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTaGTGGAAGCCAAACAAAACTAGAAGGTCCACACAAGGTGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HVGQMYVHRVLWLRF*WKPNKTRRSTQGAL Trigger: CAGAGCACCTTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTACATCTGTCCTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR GCA 90 bp | GCCATTGCAGTTATCAAACAGTCCCGAGTCGCCAATGATGAGCGTTaGCGGGTCCTCATCTCCTCTCTTAAGGACTGTCTTCATGGCATA | + |
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Preference number: 1 (lower is better) Translates to: AIAVIKQSRVANDER*RVLISSLKDCLHGI Trigger: TATGCCATGAAGACAGTCCTTAAGAGAGGAGATGAGGACCCGGCAACGCTCATCATTGGCGACTCGGGACTGTTTGATAACTGCAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
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| 3UTR GCA 90 bp | CGAGACTATAGCTGTTACTCAGTTTTATACCTGCTATGTCTTCTTTaGCCATTTTACTATGGCTCTTTAGAACAGCTAGTCATTGATAAT | + |
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Preference number: 1 (lower is better) Translates to: RDYSCYSVLYLLCLL*PFYYGSLEQLVIDN Trigger: ATTATCAATGACTAGCTGTTCTAAAGAGCCATAGTAAAATGGGCAAAGAAGACATAGCAGGTATAAAACTGAGTAACAGCTATAGTCTCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCAGGTGGAGCAGCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCATTAGAAACACCAAGATaGGGACAGCCTTGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GGRWSSVENTHWNQPKSPLETPR*GQPCPS Trigger: GGAGGGGCAAGGCTGTCCCCATCTTGGTGTTTCTAA...TGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCTGCTCCACCTGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCAGGTGGAGCAGCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCACCCAAATGTCCGCACTaGGGAAAAACCACACAAACC | + |
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Preference number: 2 (lower is better) Translates to: GGRWSSVENTHWNQPKSPPKCPH*GKTTQT Trigger: GGTTTGTGTGGTTTTTCCTCAGTGCGGACATTTGGG...TGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCTGCTCCACCTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR GCA 90 bp | TACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTAGACTGGCCTCAGGTAGGTaGTCAGCGCCCAAATGTCCG | + |
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Preference number: 2 (lower is better) Translates to: YVHRVLWLRFCWKPNKTRLASGR*SAPKCP Trigger: CGGACATTTGGGCGCTGAGCACCTACCTGAGGCCAG...TCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAGATGGGGACAGCCTTaGCCCTCCCTACAACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: GQMYVHRVLWLRFCWKPNRWGQP*PSLQQK Trigger: CTTTTGTTGTAGGGAGGGGCAAGGCTGTCCCCATCT...GTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTACATCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR GCA 90 bp | GGATGGGGGCAGGTGGAGCAGCGTGGAGAACACACATTGGAATCAGCCCAAGAGCTGTGGCTCAGGTTCTaGTGGAAGCCAAACAAAACT | + |
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Preference number: 2 (lower is better) Translates to: GWGQVEQRGEHTLESAQELWLRF*WKPNKT Trigger: AGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAG...CTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCTGCTCCACCTGCCCCCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTAGAAGGAGATGGGGACAGCCTTaGCCCTCCCACTTTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: VHRVLWLRFCWKPNKTRRRWGQP*PSHFSP Trigger: TGGTGAAAAGTGGGAGGGGCAAGGCTGTCCCCATCT...CCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236561.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCAGTTATCAAACAGTCCCGAGTCGCCAATGATGAGCGTTGCCGGGTCCTCCCAAGTCATACAGTGTaGGTGCCAGTGGGAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: IAVIKQSRVANDERCRVLPSHTV*VPVGAL Trigger: AAGAGCTCCCACTGGCACCCACACTGTATGACTTGG...GAGGACCCGGCAACGCTCATCATTGGCGACTCGGGACTGTTTGATAACTGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
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| 3UTR CAA 90 bp | CCAAGTCATACAGTGTGGGTGCCAGTGGGAGCTCTTCTAGGTGAGTaGATTGACCTGGAGCAACACTCTCCACTTTTCACCAGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PSHTVWVPVGALLGE*IDLEQHSPLFTSVA Trigger: AGCCACACTGGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAATCAACTCACCTAGAAGAGCTCCCACTGGCACCCACACTGTATGACTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
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| 3UTR-3UTR TCA 90 bp | GGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCATGGTCATGTAGGACAGCCCAAATGTCCGCACTaGGGAAAAACCACACAAACC | + |
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Preference number: 2 (lower is better) Translates to: GISPRAHHYEALHGHVGQPKCPH*GKTTQT Trigger: GGTTTGTGTGGTTTTTCCTCAGTGCGGACATTTGGG...CTGTCCTACATGACCATGGAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR CAA 90 bp | CCTTGGCCTTTCCCTCCACCTTATCAGGGGATTACAGTGACGCCATaGAGACACTACTCACAGCCATTGCAGTTATCAAACAGTCCCGAG | + |
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Preference number: 2 (lower is better) Translates to: PWPFPPPYQGITVTP*RHYSQPLQLSNSPE Trigger: CTCGGGACTGTTTGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGCGTCACTGTAATCCCCTGATAAGGTGGAGGGAAAGGCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR-3UTR GCA 90 bp | TACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTAGAAGATGGGGACAGCCTTaGCCCTCCCTACAACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: YVHRVLWLRFCWKPNKTRRWGQP*PSLQQK Trigger: CTTTTGTTGTAGGGAGGGGCAAGGCTGTCCCCATCT...TCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCATGGTCATGTAGGATTAGAAACACCAAGATaGGGACAGCCTTGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: IGISPRAHHYEALHGHVGLETPR*GQPCPS Trigger: GGAGGGGCAAGGCTGTCCCCATCTTGGTGTTTCTAA...TCCTACATGACCATGGAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR CCA 90 bp | TGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTATTAGAAACACCAAGATaGGGACAGCCTTGCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CTCTECCGSGSAGSQTKLLETPR*GQPCPS Trigger: GGAGGGGCAAGGCTGTCCCCATCTTGGTGTTTCTAA...TAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR CAA 90 bp | TATCAGGGGATTACAGTGACGCCATTGAGACACTACTCACAGCCATaGCAGTTATCAAACAGTCCCGAGTCGCCAATGATGAGCGTTGCC | + |
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Preference number: 2 (lower is better) Translates to: YQGITVTPLRHYSQP*QLSNSPESPMMSVA Trigger: GGCAACGCTCATCATTGGCGACTCGGGACTGTTTGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGCGTCACTGTAATCCCCTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTAGAAGGTCCACCCAAATGTCCGCACTaGGGAAAAACCACACAAACC | + |
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Preference number: 2 (lower is better) Translates to: TECCGSGSAGSQTKLEGPPKCPH*GKTTQT Trigger: GGTTTGTGTGGTTTTTCCTCAGTGCGGACATTTGGG...TGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAGAACTTGAGATCATTAGGAAGCTGTTAGAAACACCAAGATGGGGACAGCTGGCCTCAGGTAGGTaGTCAGCGCCCAAATGTCCG | + |
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Preference number: 2 (lower is better) Translates to: RRELEIIRKLLETPRWGQLASGR*SAPKCP Trigger: CGGACATTTGGGCGCTGAGCACCTACCTGAGGCCAG...CTGTCCCCATCTTGGTGTTTCTAACAGCTTCCTAATGATCTCAAGTTCTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCATGGTCATGTAGGACACTTTTCACCAGTGTaGCTGAAGTACCAGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: IGISPRAHHYEALHGHVGHFSPV*LKYQMD Trigger: ATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTG...TCCTACATGACCATGGAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR CCA 90 bp | GACGCCATTGAGACACTACTCACAGCCATTGCAGTTATCAAACAGTCCCGAGTCCACTTTTCACCAGTGTaGCTGAAGTACCAGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: DAIETLLTAIAVIKQSRVHFSPV*LKYQMD Trigger: ATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTG...GACTCGGGACTGTTTGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGCGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTAGAAGGTCCACACTTTTCACCAGTGTaGCTGAAGTACCAGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: TECCGSGSAGSQTKLEGPHFSPV*LKYQMD Trigger: ATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTG...TGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR CCA 90 bp | CACCATTATGAGGCTCTCCATGGTCATGTAGGACAGATGTACGTGCACAGAGTGTGGCTCAGGTTCTGCTaGAAGCCAAACAAAACTAGA | + |
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Preference number: 2 (lower is better) Translates to: HHYEALHGHVGQMYVHRVWLRFC*KPNKTR Trigger: TCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCA...CACTCTGTGCACGTACATCTGTCCTACATGACCATGGAGAGCCTCATAATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCATGGTCATGTAGGATGGCTCAGGTTCTGCTaGAAGCCAAACAAAACTAGA | + |
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Preference number: 2 (lower is better) Translates to: IGISPRAHHYEALHGHVGWLRFC*KPNKTR Trigger: TCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCA...TCCTACATGACCATGGAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAAACAAAACTAGAAGGTCCACACAAGGTGCTCTGGCCATGATGACCACACACTTTTCACCAGTGTaGCTGAAGTACCAGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: KPNKTRRSTQGALAMMTTHFSPV*LKYQMD Trigger: ATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTG...TGTGGTCATCATGGCCAGAGCACCTTGTGTGGACCTTCTAGTTTTGTTTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAAACGAGACTATAGCTGTTACTCAGTTTTATACCTGCTATGTCTTCTTTGCGTCCAGCTTGGTTACTaGCTCTGCTCATCCTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: FKRDYSCYSVLYLLCLLCVQLGY*LCSSLA Trigger: GGCCAAGGATGAGCAGAGGCAGTAACCAAGCTGGAC...GCAAAGAAGACATAGCAGGTATAAAACTGAGTAACAGCTATAGTCTCGTTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTACTCAGTTTTATACCTGCTATGTCTTCTTTGCCCATTTTACTATGGCTCGCCTCTGCTCATCCTTaGCCTTTCCCTCCACCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LLLSFIPAMSSLPILLWLASAHP*PFPPPY Trigger: ATAAGGTGGAGGGAAAGGCCAAGGATGAGCAGAGGC...GAGCCATAGTAAAATGGGCAAAGAAGACATAGCAGGTATAAAACTGAGTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR-3UTR CCA 90 bp | TATATGTCAGCTTTCAAACGAGACTATAGCTGTTACTCAGTTTTATACCTGCTACCTGCATTCTCCTTTTaGTCCAGCTTGGTTACTGCC | + |
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Preference number: 2 (lower is better) Translates to: YMSAFKRDYSCYSVLYLLPAFSF*SSLVTA Trigger: GGCAGTAACCAAGCTGGACCAAAAGGAGAATGCAGG...TAGCAGGTATAAAACTGAGTAACAGCTATAGTCTCGTTTGAAAGCTGACATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGGTAATAAAAGTTGTGTTGTTTCTCCATTGTTGTCAGCCATTGCAGTTATCCACTTTTCACCAGTGTaGCTGAAGTACCAGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: LGNKSCVVSPLLSAIAVIHFSPV*LKYQMD Trigger: ATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTG...GATAACTGCAATGGCTGACAACAATGGAGAAACAACACAACTTTTATTACCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145210.8 |
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| 3UTR TCA 72 bp | GCCTCAGGTAGGTGCTCAGCGCCCAAATGTCCGCACTaGGGAAAAACCACACAAACCTTTCCCAGGTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: ASGRCSAPKCPH*GKTTQTFPRLA Trigger: AGCTAACCTGGGAAAGGTTTGTGTGGTTTTTCCTCAGTGCGGACATTTGGGCGCTGAGCACCTACCTGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR TCA 72 bp | GACAGCCTTGCCCCTCCCACTTTTCACCAGTGTGGCTaGAGTACCAGATGGATATGTGTTGTCACCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: DSLAPPTFHQCG*STRWICVVTSW Trigger: CCAGCTGGTGACAACACATATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTGGGAGGGGCAAGGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236561.2 |
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| 3UTR-3UTR CAA 90 bp | CCATGGTCATGTAGGACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGAAGATGGGGACAGCCTaGCCCCTCCCTACAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: PWSCRTDVRAQSAVAQVLKMGTA*PLPTTK Trigger: TTTTGTTGTAGGGAGGGGCAAGGCTGTCCCCATCTT...CAGAACCTGAGCCACAGCACTCTGTGCACGTACATCTGTCCTACATGACCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR CAA 90 bp | GAACACACATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCATGGTCAAGATGGGGACAGCCTaGCCCCTCCCTACAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: EHTLESAQEPTIMRLSMVKMGTA*PLPTTK Trigger: TTTTGTTGTAGGGAGGGGCAAGGCTGTCCCCATCTT...GACCATGGAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR-3UTR CAA 90 bp | GACTGTCTTCATGGCATAGAGGCCAAGTCATACAGTGTGGGTGCCAGTGGGAGCCCAGATGGATATGTGTaGTCACCAGCTGGAATTCTT | + |
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Preference number: 3 (lower is better) Translates to: DCLHGIEAKSYSVGASGSPDGYV*SPAGIL Trigger: AAGAATTCCAGCTGGTGACAACACATATCCATCTGG...GCTCCCACTGGCACCCACACTGTATGACTTGGCCTCTATGCCATGAAGACAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
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| 3UTR GCA 72 bp | AGGAAGCTGTTAGAAACACCAAGATGGGGACAGCCTTaGCCCTCCCTACAACAAAAGGAAAGAGTCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: RKLLETPRWGQP*PSLQQKERVSC Trigger: GCAGGAGACTCTTTCCTTTTGTTGTAGGGAGGGGCAAGGCTGTCCCCATCTTGGTGTTTCTAACAGCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
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| 3UTR GCA 72 bp | GTTATCAAACAGTCCCGAGTCGCCAATGATGAGCGTTaGCGGGTCCTCATCTCCTCTCTTAAGGACTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: VIKQSRVANDER*RVLISSLKDCL Trigger: AAGACAGTCCTTAAGAGAGGAGATGAGGACCCGGCAACGCTCATCATTGGCGACTCGGGACTGTTTGATAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
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| 3UTR CCA 72 bp | TTTTGGTCCAGCTTGGTTACTGCCTCTGCTCATCCTTaGCCTTTCCCTCCACCTTATCAGGGGATTACAGTG | + |
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Preference number: 3 (lower is better) Translates to: FWSSLVTASAHP*PFPPPYQGITV Trigger: CACTGTAATCCCCTGATAAGGTGGAGGGAAAGGCCAAGGATGAGCAGAGGCAGTAACCAAGCTGGACCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
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| 3UTR GCA 72 bp | CAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTaGTGGAAGCCAAACAAAACTAGAAGGTCCACACAA | + |
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Preference number: 3 (lower is better) Translates to: QMYVHRVLWLRF*WKPNKTRRSTQ Trigger: TTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTACATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| 3UTR CCA 72 bp | CTTGAGATCATTAGGAAGCTGTTAGAAACACCAAGATaGGGACAGCCTTGCCCCTCCCACTTTTCACCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LEIIRKLLETPR*GQPCPSHFSPV Trigger: CACTGGTGAAAAGTGGGAGGGGCAAGGCTGTCCCCATCTTGGTGTTTCTAACAGCTTCCTAATGATCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236561.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCGCACTGAGGAAAAACCACACAAACCTTTCCCAGGTTAGCTCGACCTACCACCCAGATGGATATGTGTaGTCACCAGCTGGAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SALRKNHTNLSQVSSTYHPDGYV*SPAGIL Trigger: AAGAATTCCAGCTGGTGACAACACATATCCATCTGG...GTGGTAGGTCGAGCTAACCTGGGAAAGGTTTGTGTGGTTTTTCCTCAGTGCGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
||
| 3UTR TCA 72 bp | AACACACATTGGAATCAGCCCAAGAGCCCACCATTATaGGGCTCTCCATGGTCATGTAGGACAGATGTACGT | + |
|
Preference number: 3 (lower is better) Translates to: NTHWNQPKSPPL*GSPWSCRTDVR Trigger: ACGTACATCTGTCCTACATGACCATGGAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| 3UTR CCA 72 bp | TTGACCTGGAGCAACACTCTCCACTTTTCACCAGTGTaGCTGAAGTACCAGATGGATATGTGTTGTCACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTWSNTLHFSPV*LKYQMDMCCHQ Trigger: CTGGTGACAACACATATCCATCTGGTACTTCAGCCACACTGGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATTGTTGTCAGCCATTGCAGTTATCAAACAGTCCCGAGTCGCCAATGATGCCAGATGGATATGTGTaGTCACCAGCTGGAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LHCCQPLQLSNSPESPMMPDGYV*SPAGIL Trigger: AAGAATTCCAGCTGGTGACAACACATATCCATCTGG...CATCATTGGCGACTCGGGACTGTTTGATAACTGCAATGGCTGACAACAATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145210.8 |
||
| 3UTR CCA 72 bp | CTTGAGATCATTAGGAAGCTGTTAGAAACACCAAGATaGGGACAGCCTTGCCCCTCCCTACAACAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LEIIRKLLETPR*GQPCPSLQQKE Trigger: TTCCTTTTGTTGTAGGGAGGGGCAAGGCTGTCCCCATCTTGGTGTTTCTAACAGCTTCCTAATGATCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
||
| 3UTR CCA 72 bp | GTCATTGATAATTTATCTCCCCCTGCATTCTCCTTTTaGTCCAGCTTGGTTACTGCCTCTGCTCATCCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VIDNLSPPAFSF*SSLVTASAHPW Trigger: CCAAGGATGAGCAGAGGCAGTAACCAAGCTGGACCAAAAGGAGAATGCAGGGGGAGATAAATTATCAATGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGGCCATGATGACCACAGAAGAGAACTTGAGATCATTAGGAAGCTGTTAGAACCAGATGGATATGTGTaGTCACCAGCTGGAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGHDDHRRELEIIRKLLEPDGYV*SPAGIL Trigger: AAGAATTCCAGCTGGTGACAACACATATCCATCTGG...TTCTAACAGCTTCCTAATGATCTCAAGTTCTCTTCTGTGGTCATCATGGCCAGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| 3UTR-3UTR CAA 90 bp | GTATGTACTAATTATAGGGCCACAAGTATATGTCAGCTTTCAAACGAGACTATATGCCTCTGCTCATCCTaGGCCTTTCCCTCCACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VCTNYRATSICQLSNETICLCSS*AFPSTL Trigger: TAAGGTGGAGGGAAAGGCCAAGGATGAGCAGAGGCA...TATAGTCTCGTTTGAAAGCTGACATATACTTGTGGCCCTATAATTAGTACATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGATGACCACAGAAGAGAACTTGAGATCATTAGGAAGCTGTTAGAAACACCACCAGATGGATATGTGTaGTCACCAGCTGGAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HDDHRRELEIIRKLLETPPDGYV*SPAGIL Trigger: AAGAATTCCAGCTGGTGACAACACATATCCATCTGG...TGGTGTTTCTAACAGCTTCCTAATGATCTCAAGTTCTCTTCTGTGGTCATCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| 3UTR GCA 72 bp | TCAAACGAGACTATAGCTGTTACTCAGTTTTATACCTaGTATGTCTTCTTTGCCCATTTTACTATGGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SNETIAVTQFYT*YVFFAHFTMAL Trigger: AAGAGCCATAGTAAAATGGGCAAAGAAGACATAGCAGGTATAAAACTGAGTAACAGCTATAGTCTCGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
||
| 3UTR CAA 72 bp | GGATGGGGGCAGGTGGAGCAGCGTGGAGAACACACATaGGAATCAGCCCAAGAGCCCACCATTATGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GWGQVEQRGEHT*ESAQEPTIMRL Trigger: GAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCTGCTCCACCTGCCCCCATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTGCCAGTGGGAGCTCTTCTAGGTGAGTTGATTGACCTGGAGCAACACAGGGGCATCTTTCGCTaGCAGAGGTTTCCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VWVPVGALLGELIDLEQHRGIFR*QRFPFV Trigger: TACAAAGGGAAACCTCTGCCAGCGAAAGATGCCCCT...GTGTTGCTCCAGGTCAATCAACTCACCTAGAAGAGCTCCCACTGGCACCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCAGCCATCATAGCGGATaGGAAGGTCAAGGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: AWRTHIGISPRAHHYEALSHHSG*EGQGHT Trigger: AGTGTGGCCTTGACCTTCCCATCCGCTATGATGGCT...GAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGAGCAGCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCACCATTAAGCCATCATAGCGGATaGGAAGGTCAAGGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: RWSSVENTHWNQPKSPPLSHHSG*EGQGHT Trigger: AGTGTGGCCTTGACCTTCCCATCCGCTATGATGGCT...TAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCTGCTCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| 3UTR CAA 72 bp | ACAGTGTGGGTGCCAGTGGGAGCTCTTCTAGGTGAGTaGATTGACCTGGAGCAACACTCTCCACTTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TVWVPVGALLGE*IDLEQHSPLFT Trigger: GGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAATCAACTCACCTAGAAGAGCTCCCACTGGCACCCACACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR TCA 90 bp | CCATGGTCATGTAGGACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTCAAGCAGCAGCTCTaGGCCACAAAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PWSCRTDVRAQSAVAQVLLKQQL*ATKEEQ Trigger: TTGCTCTTCTTTTGTGGCTCAGAGCTGCTGCTTGAG...CAGAACCTGAGCCACAGCACTCTGTGCACGTACATCTGTCCTACATGACCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAACTCAAGCAGCAGCTCTaGGCCACAAAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TDVRAQSAVAQVLLEAKQLKQQL*ATKEEQ Trigger: TTGCTCTTCTTTTGTGGCTCAGAGCTGCTGCTTGAG...TTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTACATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGTGAGTTGATTGACCTGGAGCAACACTCTCCACTTTTCACCAGTGTGGCTAGCCATCATAGCGGATaGGAAGGTCAAGGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: LGELIDLEQHSPLFTSVASHHSG*EGQGHT Trigger: AGTGTGGCCTTGACCTTCCCATCCGCTATGATGGCT...AGCCACACTGGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAATCAACTCACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR CCA 90 bp | TATGAGGCTCTCCATGGTCATGTAGGACAGATGTACGTGCACAGAGTGCTGTGGCATCCAGGACTAAGTTaGCTGTTGGGTACGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: YEALHGHVGQMYVHRVLWHPGLS*LLGTAT Trigger: TGTTGCCGTACCCAACAGCCAACTTAGTCCTGGATG...CCACAGCACTCTGTGCACGTACATCTGTCCTACATGACCATGGAGAGCCTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154383.2 |
||
| CDS-3UTR TCA 90 bp | TGTACGTGCACAGAGTGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTACTCAAGCAGCAGCTCTaGGCCACAAAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CTCTECCGSGSAGSQTKLLKQQL*ATKEEQ Trigger: TTGCTCTTCTTTTGTGGCTCAGAGCTGCTGCTTGAG...TAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCACTCTGTGCACGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR TCA 90 bp | TTGACCTGGAGCAACACTCTCCACTTTTCACCAGTGTGGCTGAAGTACCAGATGCTCAAGCAGCAGCTCTaGGCCACAAAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTWSNTLHFSPVWLKYQMLKQQL*ATKEEQ Trigger: TTGCTCTTCTTTTGTGGCTCAGAGCTGCTGCTTGAG...CATCTGGTACTTCAGCCACACTGGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAAGCCAAACAAAACTAGAAGGTCCACACAAGGTGCTCTGGCCATGATGCTCAAGCAGCAGCTCTaGGCCACAAAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CWKPNKTRRSTQGALAMMLKQQL*ATKEEQ Trigger: TTGCTCTTCTTTTGTGGCTCAGAGCTGCTGCTTGAG...CATCATGGCCAGAGCACCTTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAAGCCAAACAAAACTAGAAGGTCCACACAAGGTGCTCTGGCCATGATGAGGGGCATCTTTCGCTaGCAGAGGTTTCCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CWKPNKTRRSTQGALAMMRGIFR*QRFPFV Trigger: TACAAAGGGAAACCTCTGCCAGCGAAAGATGCCCCT...CATCATGGCCAGAGCACCTTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTAGAAGGTCCACACAAGAGGGGCATCTTTCGCTaGCAGAGGTTTCCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CCGSGSAGSQTKLEGPHKRGIFR*QRFPFV Trigger: TACAAAGGGAAACCTCTGCCAGCGAAAGATGCCCCT...CTTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAAACCACACAAACCTTTCCCAGGTTAGCTCGACCTACCACTTTTCACCAGAGCCATCATAGCGGATaGGAAGGTCAAGGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: GKTTQTFPRLARPTTFHQSHHSG*EGQGHT Trigger: AGTGTGGCCTTGACCTTCCCATCCGCTATGATGGCT...CTGGTGAAAAGTGGTAGGTCGAGCTAACCTGGGAAAGGTTTGTGTGGTTTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCTAGGTGAGTTGATTGACCTGGAGCAACACTCTCCACTTTTCACCAGTAGCCATCATAGCGGATaGGAAGGTCAAGGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: ALLGELIDLEQHSPLFTSSHHSG*EGQGHT Trigger: AGTGTGGCCTTGACCTTCCCATCCGCTATGATGGCT...ACTGGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAATCAACTCACCTAGAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR CCA 90 bp | TTGACCTGGAGCAACACTCTCCACTTTTCACCAGTGTGGCTGAAGTACCAGATGCATCCAGGACTAAGTTaGCTGTTGGGTACGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LTWSNTLHFSPVWLKYQMHPGLS*LLGTAT Trigger: TGTTGCCGTACCCAACAGCCAACTTAGTCCTGGATG...CATCTGGTACTTCAGCCACACTGGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGGTGAGTTGATTGACCTGGAGCAACACTCTCCACTTTTCACCAGTGTGAGGGGCATCTTTCGCTaGCAGAGGTTTCCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLGELIDLEQHSPLFTSVRGIFR*QRFPFV Trigger: TACAAAGGGAAACCTCTGCCAGCGAAAGATGCCCCT...CACACTGGTGAAAAGTGGAGAGTGTTGCTCCAGGTCAATCAACTCACCTAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTGCCAGTGGGAGCTCTTCTAGGTGAGTTGATTGACCTGGAGCAACACCGAAAAACAATCGTATaGCTTCAATGCCAAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VWVPVGALLGELIDLEQHRKTIV*LQCQDR Trigger: TCTATCTTGGCATTGAAGTCATACGATTGTTTTTCG...GTGTTGCTCCAGGTCAATCAACTCACCTAGAAGAGCTCCCACTGGCACCCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTGTTTCTCCATTGTTGTCAGCCATTGCAGTTATCAAACAGTCCCGAGTCGCTCAAGCAGCAGCTCTaGGCCACAAAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLFLHCCQPLQLSNSPESLKQQL*ATKEEQ Trigger: TTGCTCTTCTTTTGTGGCTCAGAGCTGCTGCTTGAG...CGACTCGGGACTGTTTGATAACTGCAATGGCTGACAACAATGGAGAAACAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145210.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCACCATTATGAGGCTCTCCGAAAAACAATCGTATaGCTTCAATGCCAAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWRTHIGISPRAHHYEALRKTIV*LQCQDR Trigger: TCTATCTTGGCATTGAAGTCATACGATTGTTTTTCG...GAGAGCCTCATAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAACTTGAGATCATTAGGAAGCTGTTAGAAACACCAAGATGGGGACAGCCTAGGGGCATCTTTCGCTaGCAGAGGTTTCCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RELEIIRKLLETPRWGQPRGIFR*QRFPFV Trigger: TACAAAGGGAAACCTCTGCCAGCGAAAGATGCCCCT...AGGCTGTCCCCATCTTGGTGTTTCTAACAGCTTCCTAATGATCTCAAGTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCCATGATGACCACAGAAGAGAACTTGAGATCATTAGGAAGCTGTTAGAAAGCCATCATAGCGGATaGGAAGGTCAAGGCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: SGHDDHRRELEIIRKLLESHHSG*EGQGHT Trigger: AGTGTGGCCTTGACCTTCCCATCCGCTATGATGGCT...TTCTAACAGCTTCCTAATGATCTCAAGTTCTCTTCTGTGGTCATCATGGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| 3UTR CAA 72 bp | ATTACAGTGACGCCATTGAGACACTACTCACAGCCATaGCAGTTATCAAACAGTCCCGAGTCGCCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: ITVTPLRHYSQP*QLSNSPESPMM Trigger: CATCATTGGCGACTCGGGACTGTTTGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGCGTCACTGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
||
| 3UTR CAA 72 bp | TTCCCTCCACCTTATCAGGGGATTACAGTGACGCCATaGAGACACTACTCACAGCCATTGCAGTTATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FPPPYQGITVTP*RHYSQPLQLSN Trigger: GTTTGATAACTGCAATGGCTGTGAGTAGTGTCTCAATGGCGTCACTGTAATCCCCTGATAAGGTGGAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123788.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTGGGAGCTCTTCTAGGTGAGTTGATTGACCTGGAGCAACACTCTCCACTTCGAAAAACAATCGTATaGCTTCAATGCCAAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVGALLGELIDLEQHSPLRKTIV*LQCQDR Trigger: TCTATCTTGGCATTGAAGTCATACGATTGTTTTTCG...AAGTGGAGAGTGTTGCTCCAGGTCAATCAACTCACCTAGAAGAGCTCCCACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTACAACAAAAGGAAAGAGTCTCCTGCTGATGATCCCGCTTTAAAGATGCGAAAAACAATCGTATaGCTTCAATGCCAAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPYNKRKESPADDPALKMRKTIV*LQCQDR Trigger: TCTATCTTGGCATTGAAGTCATACGATTGTTTTTCG...CATCTTTAAAGCGGGATCATCAGCAGGAGACTCTTTCCTTTTGTTGTAGGGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 |
||
| CDS-3UTR TCA 90 bp | CATGATGACCACAGAAGAGAACTTGAGATCATTAGGAAGCTGTTAGAAACACCACGAAAAACAATCGTATaGCTTCAATGCCAAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HDDHRRELEIIRKLLETPRKTIV*LQCQDR Trigger: TCTATCTTGGCATTGAAGTCATACGATTGTTTTTCG...TGGTGTTTCTAACAGCTTCCTAATGATCTCAAGTTCTCTTCTGTGGTCATCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| 3UTR CAA 72 bp | GTATTAGGTAATAAAAGTTGTGTTGTTTCTCCATTGTaGTCAGCCATTGCAGTTATCAAACAGTCCCGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGNKSCVVSPL*SAIAVIKQSRV Trigger: GACTCGGGACTGTTTGATAACTGCAATGGCTGACAACAATGGAGAAACAACACAACTTTTATTACCTAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145210.8 |
||
| 3UTR CAA 72 bp | GAAGTATTAGGTAATAAAAGTTGTGTTGTTTCTCCATaGTTGTCAGCCATTGCAGTTATCAAACAGTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EVLGNKSCVVSP*LSAIAVIKQSR Trigger: TCGGGACTGTTTGATAACTGCAATGGCTGACAACAATGGAGAAACAACACAACTTTTATTACCTAATACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145210.8 |
||
| CDS CCA 90 bp | CACGTAGGTCTGCAGCAGCAGGTAATAGGAAGCCATCATAGCGGATaGGAAGGTCAAGGCCACACTAATGCCAAGGGGCATCTTTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HVGLQQQVIGSHHSG*EGQGHTNAKGHLSL Trigger: CAGCGAAAGATGCCCCTTGGCATTAGTGTGGCCTTGACCTTCCCATCCGCTATGATGGCTTCCTATTACCTGCTGCTGCAGACCTACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000123788.8 ENSMUST00000145210.8 ENSMUST00000154383.2 ENSMUST00000236561.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTGCCAGTGGGAGCTCTTCTAGGTGAGTTGATTGACCTGGAGCAACACGGCAGAGGTTTCCCTTaGTACCGAAAAACAATCGTA | + |
|
Preference number: 5 (lower is better) Translates to: VWVPVGALLGELIDLEQHGRGFP*YRKTIV Trigger: TACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCC...GTGTTGCTCCAGGTCAATCAACTCACCTAGAAGAGCTCCCACTGGCACCCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000145210.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGAGCAGCGTGGAGAACACACATTGGAATCAGCCCAAGAGCCCACCATTATGGCAGAGGTTTCCCTTaGTACCGAAAAACAATCGTA | + |
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Preference number: 5 (lower is better) Translates to: GGAAWRTHIGISPRAHHYGRGFP*YRKTIV Trigger: TACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCC...ATAATGGTGGGCTCTTGGGCTGATTCCAATGTGTGTTCTCCACGCTGCTCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| CDS CCA 90 bp | GATGGGAAGGTCAAGGCCACACTAATGCCAAGGGGCATCTTTCGCTaGCAGAGGTTTCCCTTTGTACCGAAAAACAATCGTATGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: DGKVKATLMPRGIFR*QRFPFVPKNNRMTS Trigger: TGAAGTCATACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCCAGCGAAAGATGCCCCTTGGCATTAGTGTGGCCTTGACCTTCCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000123788.8 ENSMUST00000145210.8 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| CDS-3UTR CAA 90 bp | TGCTGTGGCTCAGGTTCTGCTGGAAGCCAAACAAAACTAGAAGGTCCACACAAGGGCAGAGGTTTCCCTTaGTACCGAAAAACAATCGTA | + |
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Preference number: 5 (lower is better) Translates to: CCGSGSAGSQTKLEGPHKGRGFP*YRKTIV Trigger: TACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCC...CTTGTGTGGACCTTCTAGTTTTGTTTGGCTTCCAGCAGAACCTGAGCCACAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| CDS-3UTR CAA 90 bp | GTGTTGTTTCTCCATTGTTGTCAGCCATTGCAGTTATCAAACAGTCCCGAGTCGGGCAGAGGTTTCCCTTaGTACCGAAAAACAATCGTA | + |
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Preference number: 5 (lower is better) Translates to: VLFLHCCQPLQLSNSPESGRGFP*YRKTIV Trigger: TACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCC...CGACTCGGGACTGTTTGATAACTGCAATGGCTGACAACAATGGAGAAACAACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145210.8 |
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| CDS-3UTR CAA 90 bp | ACAAGGTGCTCTGGCCATGATGACCACAGAAGAGAACTTGAGATCATTAGGAAGGGCAGAGGTTTCCCTTaGTACCGAAAAACAATCGTA | + |
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Preference number: 5 (lower is better) Translates to: TRCSGHDDHRRELEIIRKGRGFP*YRKTIV Trigger: TACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCC...CTTCCTAATGATCTCAAGTTCTCTTCTGTGGTCATCATGGCCAGAGCACCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| CDS CCA 72 bp | GATAGAGCAGCAGCATCACCACATCCAGGACTAAGTTaGCTGTTGGGTACGGCAACAGGAGCCCTTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: DRAAASPHPGLS*LLGTATGALCT Trigger: TGTACAAAGGGCTCCTGTTGCCGTACCCAACAGCCAACTTAGTCCTGGATGTGGTGATGCTGCTGCTCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000154383.2 |
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| CDS CCA 72 bp | GTCAAGGCCACACTAATGCCAAGGGGCATCTTTCGCTaGCAGAGGTTTCCCTTTGTACCGAAAAACAATCGT | + |
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Preference number: 6 (lower is better) Translates to: VKATLMPRGIFR*QRFPFVPKNNR Trigger: ACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCCAGCGAAAGATGCCCCTTGGCATTAGTGTGGCCTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025569.9 ENSMUST00000059582.9 ENSMUST00000123788.8 ENSMUST00000145210.8 ENSMUST00000154383.2 ENSMUST00000236561.2 |
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| CDS TCA 72 bp | GGCAGAGGTTTCCCTTTGTACCGAAAAACAATCGTATaGCTTCAATGCCAAGATAGAGCAGCAGCATCACCA | + |
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Preference number: 6 (lower is better) Translates to: GRGFPLYRKTIV*LQCQDRAAASP Trigger: TGGTGATGCTGCTGCTCTATCTTGGCATTGAAGTCATACGATTGTTTTTCGGTACAAAGGGAAACCTCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123788.8 ENSMUST00000154383.2 |
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