Pregenerated sensors for TMEM215 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046593Ensembl transcript IDs: ENSMUST00000049655.3, ENSMUST00000179526.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTGTGGTGTAGCATTTGAGATTGTCCCACCTGGGACTGAGTGGTaGAAACTGGCCAGTGTGCAGACCAATCCGTCCCCATTCCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: FCGVAFEIVPPGTEW*KLASVQTNPSPFLL Trigger: CAAGAGGAATGGGGACGGATTGGTCTGCACACTGGCCAGTTTCCACCACTCAGTCCCAGGTGGGACAATCTCAAATGCTACACCACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR CCA 90 bp | AGTTTCTGTGGTGTAGCATTTGAGATTGTCCCACCTGGGACTGAGTaGTGGAAACTGGCCAGTGTGCAGACCAATCCGTCCCCATTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SFCGVAFEIVPPGTE*WKLASVQTNPSPFL Trigger: GAGGAATGGGGACGGATTGGTCTGCACACTGGCCAGTTTCCACCACTCAGTCCCAGGTGGGACAATCTCAAATGCTACACCACAGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR GCA 90 bp | CTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATaGCCCCAACATGCCTATTTACATGAGTATCAGGCACCAGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: LSLPSVLNSPYFPKL*PQHAYLHEYQAPEV Trigger: GACCTCTGGTGCCTGATACTCATGTAAATAGGCATGTTGGGGGCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR CCA 90 bp | GTTTCTAACAGTGTGAAGGCTGTTGGAGCACAGATTCTCTTTCCTTaGGAGCTGAGTATAGCAATGTGTCTGTCAACATGGGACCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: VSNSVKAVGAQILFP*ELSIAMCLSTWDPC Trigger: ACAAGGGTCCCATGTTGACAGACACATTGCTATACTCAGCTCCCAAGGAAAGAGAATCTGTGCTCCAACAGCCTTCACACTGTTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR GCA 90 bp | CTTGTAGTCTCATACTTTAAAAGGGATACAGTAATTCCTAGTACATaGCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACA | + |
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Preference number: 1 (lower is better) Translates to: LVVSYFKRDTVIPST*LPEMLEVLCKICLT Trigger: TGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTACTAGGAATTACTGTATCCCTTTTAAAGTATGAGACTACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR GCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTCAGGCACCAGAGGTCTaGACCCCCATCACATACCGT | + |
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Preference number: 2 (lower is better) Translates to: VHASQKCWRYFVKFVLQTQAPEV*TPITYR Trigger: ACGGTATGTGATGGGGGTGCAGACCTCTGGTGCCTG...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCACTCCAAAACCCATCCCATATCAGGAGGATTCACCTATTCTATCTTGATTCAGTTTCTAACAGTGTaGAGGCTGTTGGAGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: PHSKTHPISGGFTYSILIQFLTV*RLLEHR Trigger: TCTGTGCTCCAACAGCCTTCACACTGTTAGAAACTG...AATCAAGATAGAATAGGTGAATCCTCCTGATATGGGATGGGTTTTGGAGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCACATGCCTATTTACATaGGTATCAGGCACCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCTCLFT*VSGTRG Trigger: ACCTCTGGTGCCTGATACTCATGTAAATAGGCATGT...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR CCA 90 bp | GTAACATACAGTTTCTGTGGTGTAGCATTTGAGATTGTCCCACCTGGGACTGAGGCCTCCCAGAAATGCTaGAGGTACTTTGTAAAATTT | + |
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Preference number: 2 (lower is better) Translates to: VTYSFCGVAFEIVPPGTEASQKC*RYFVKF Trigger: AAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGC...CTCAGTCCCAGGTGGGACAATCTCAAATGCTACACCACAGAAACTGTATGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR-3UTR TCA 90 bp | AAATTGCTTACAGTGACAAACACAACAGGGGAAACTTTCTGCTTTCAAGACAGACAGTTTCTAACAGTGTaGAGGCTGTTGGAGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: KLLTVTNTTGETFCFQDRQFLTV*RLLEHR Trigger: TCTGTGCTCCAACAGCCTTCACACTGTTAGAAACTG...TCTGTCTTGAAAGCAGAAAGTTTCCCCTGTTGTGTTTGTCACTGTAAGCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR-3UTR CCA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCCAGATTCTCTTTCCTTaGGAGCTGAGTATAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCQILFP*ELSIAM Trigger: CATTGCTATACTCAGCTCCCAAGGAAAGAGAATCTG...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCATTGCATTCTCATCATGGTTGGGGGAGGGGCGCTGTTGAACAAATGTATACAGCAAGCACTTTTTaGGCTGTTTTACAAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: VSLHSHHGWGRGAVEQMYTASTF*AVLQSN Trigger: ATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGT...ATACATTTGTTCAACAGCGCCCCTCCCCCAACCATGATGAGAATGCAATGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTGCTTACAGTGACAAACACAACAGGGGAAACTTTCTGCTTTCAAGACAGACAGATTCTCTTTCCTTaGGAGCTGAGTATAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: KLLTVTNTTGETFCFQDRQILFP*ELSIAM Trigger: CATTGCTATACTCAGCTCCCAAGGAAAGAGAATCTG...TCTGTCTTGAAAGCAGAAAGTTTCCCCTGTTGTGTTTGTCACTGTAAGCAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR-3UTR TCA 90 bp | TCATACAAAGTTTTCATAGAGCTCAGGACTAATGGATTGACTTGTAGTCTCATAACATGCCTATTTACATaGGTATCAGGCACCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: SYKVFIELRTNGLTCSLITCLFT*VSGTRG Trigger: ACCTCTGGTGCCTGATACTCATGTAAATAGGCATGT...TATGAGACTACAAGTCAATCCATTAGTCCTGAGCTCTATGAAAACTTTGTATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR GCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTTACTTCCCTAAACTATaGCCCCAACATGCCTATTTA | + |
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Preference number: 2 (lower is better) Translates to: VHASQKCWRYFVKFVLQTYFPKL*PQHAYL Trigger: TAAATAGGCATGTTGGGGGCATAGTTTAGGGAAGTA...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR GCA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTTACTTCCCTAAACTATaGCCCCAACATGCCTATTTA | + |
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Preference number: 2 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFYFPKL*PQHAYL Trigger: TAAATAGGCATGTTGGGGGCATAGTTTAGGGAAGTA...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATTAGGATTTTTAAGAGCATAATCCTTAAGAGAGGACAGTTGCCACACTTAACAGCAAGCACTTTTTaGGCTGTTTTACAAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: RIRIFKSIILKRGQLPHLTASTF*AVLQSN Trigger: ATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGT...TAAGTGTGGCAACTGTCCTCTCTTAAGGATTATGCTCTTAAAAATCCTAATTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR CCA 72 bp | GTAGCATTTGAGATTGTCCCACCTGGGACTGAGTGGTaGAAACTGGCCAGTGTGCAGACCAATCCGTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VAFEIVPPGTEW*KLASVQTNPSP Trigger: TGGGGACGGATTGGTCTGCACACTGGCCAGTTTCCACCACTCAGTCCCAGGTGGGACAATCTCAAATGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR CCA 72 bp | GGTGTAGCATTTGAGATTGTCCCACCTGGGACTGAGTaGTGGAAACTGGCCAGTGTGCAGACCAATCCGTCC | + |
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Preference number: 3 (lower is better) Translates to: GVAFEIVPPGTE*WKLASVQTNPS Trigger: GGACGGATTGGTCTGCACACTGGCCAGTTTCCACCACTCAGTCCCAGGTGGGACAATCTCAAATGCTACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR TCA 72 bp | CACCCCCATCACATACCGTGCCAGTTTCTAACAGTGTaGAGGCTGTTGGAGCACAGATTCTCTTTCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: HPHHIPCQFLTV*RLLEHRFSFLG Trigger: CCCAAGGAAAGAGAATCTGTGCTCCAACAGCCTTCACACTGTTAGAAACTGGCACGGTATGTGATGGGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR CAA 90 bp | GTAACATACAGTTTCTGTGGTGTAGCATTTGAGATTGTCCCACCTGGGACTGAGGGGGGAGGGGCGCTGTaGAACAAATGTATAAATGAC | + |
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Preference number: 3 (lower is better) Translates to: VTYSFCGVAFEIVPPGTEGGGAL*NKCIND Trigger: GTCATTTATACATTTGTTCAACAGCGCCCCTCCCCC...CTCAGTCCCAGGTGGGACAATCTCAAATGCTACACCACAGAAACTGTATGTTAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR CCA 72 bp | AGTGTGAAGGCTGTTGGAGCACAGATTCTCTTTCCTTaGGAGCTGAGTATAGCAATGTGTCTGTCAACATGG | + |
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Preference number: 3 (lower is better) Translates to: SVKAVGAQILFP*ELSIAMCLSTW Trigger: CCATGTTGACAGACACATTGCTATACTCAGCTCCCAAGGAAAGAGAATCTGTGCTCCAACAGCCTTCACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR GCA 72 bp | CCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATaGCCCCAACATGCCTATTTACATGAGTATCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PSVLNSPYFPKL*PQHAYLHEYQA Trigger: TGCCTGATACTCATGTAAATAGGCATGTTGGGGGCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCACTCCAAAACCCATCCCATATCAGGAGGATTCACCTATTCTATCTTGATTGACAGCAAGCACTTTTaGGGCTGTTTTACAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: PHSKTHPISGGFTYSILIDSKHF*GCFTKQ Trigger: TTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTC...AATCAAGATAGAATAGGTGAATCCTCCTGATATGGGATGGGTTTTGGAGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR-3UTR CAA 90 bp | TCATACAAAGTTTTCATAGAGCTCAGGACTAATGGATTGACTTGTAGTCTCATAGACAGCAAGCACTTTTaGGGCTGTTTTACAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SYKVFIELRTNGLTCSLIDSKHF*GCFTKQ Trigger: TTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTC...TATGAGACTACAAGTCAATCCATTAGTCCTGAGCTCTATGAAAACTTTGTATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| 3UTR TCA 72 bp | AAAATAGCTAATTACTTTAAATCAGTACTTGACCTGTaGCTTGGAAATGGGACTCTGTGCACACATGTACAC | + |
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Preference number: 3 (lower is better) Translates to: KIANYFKSVLDL*LGNGTLCTHVH Trigger: GTGTACATGTGTGCACAGAGTCCCATTTCCAAGTCACAGGTCAAGTACTGATTTAAAGTAATTAGCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| 3UTR GCA 72 bp | TCATACTTTAAAAGGGATACAGTAATTCCTAGTACATaGCTCCCAGAAATGCTGGAGGTACTTTGTAAAATT | + |
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Preference number: 3 (lower is better) Translates to: SYFKRDTVIPST*LPEMLEVLCKI Trigger: AATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTACTAGGAATTACTGTATCCCTTTTAAAGTATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR GCA 90 bp | GTAACATACAGTTTCTGTGGTGTAGCATTTGAGATTGTCCCACCTGGGACTGAGGGTCCCTGTGGGAGCTaGTTGCCTCTGAGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VTYSFCGVAFEIVPPGTEGPCGS*LPLRPA Trigger: GGCAGGCCTCAGAGGCAAGCAGCTCCCACAGGGACC...CTCAGTCCCAGGTGGGACAATCTCAAATGCTACACCACAGAAACTGTATGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| CDS-3UTR CCA 90 bp | GTTTCATTGCATTCTCATCATGGTTGGGGGAGGGGCGCTGTTGAACAAATGTATCTCACCTGGTCCCTGTaGGAGCTGCTTGCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSHHGWGRGAVEQMYLTWSL*ELLASE Trigger: CTCAGAGGCAAGCAGCTCCCACAGGGACCAGGTGAG...ATACATTTGTTCAACAGCGCCCCTCCCCCAACCATGATGAGAATGCAATGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CCA 90 bp | GTTTCATTGCATTCTCATCATGGTTGGGGGAGGGGCGCTGTTGAACAAATGTATAGCCTTCGGTTTTCCTaGCCAGAGCAATGGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: VSLHSHHGWGRGAVEQMYSLRFS*PEQWRR Trigger: TCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCT...ATACATTTGTTCAACAGCGCCCCTCCCCCAACCATGATGAGAATGCAATGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CCA 90 bp | GTAACATACAGTTTCTGTGGTGTAGCATTTGAGATTGTCCCACCTGGGACTGAGCCCAGGCTGAGCACTTaGCATCCAAGGCACTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VTYSFCGVAFEIVPPGTEPRLST*HPRHCR Trigger: CCTACAGTGCCTTGGATGCCAAGTGCTCAGCCTGGG...CTCAGTCCCAGGTGGGACAATCTCAAATGCTACACCACAGAAACTGTATGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| CDS-3UTR GCA 90 bp | GTTTCATTGCATTCTCATCATGGTTGGGGGAGGGGCGCTGTTGAACAAATGTATTCTCTGGCCACTTGGTaGAGCCTTCGGTTTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSHHGWGRGAVEQMYSLATW*SLRFSW Trigger: CCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGA...ATACATTTGTTCAACAGCGCCCCTCCCCCAACCATGATGAGAATGCAATGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR GCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTGGTCCCTGTGGGAGCTaGTTGCCTCTGAGGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VHASQKCWRYFVKFVLQTGPCGS*LPLRPA Trigger: GGCAGGCCTCAGAGGCAAGCAGCTCCCACAGGGACC...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CCA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCTGCCTGGTAGGCAGATaGCTGGCCCGATGGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCCLVGR*LARWPT Trigger: TGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCA...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CCA 90 bp | CAGGTAAGACTTGCTGAGCCCAAACAACATTCGTCTGTCTCCTCACGTCTAAAATCCTGCCGCCCACTCTaGACTAGACTCTGGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: QVRLAEPKQHSSVSSRLKSCRPL*TRLWHS Trigger: AGAATGCCAGAGTCTAGTCCAGAGTGGGCGGCAGGA...TTTTAGACGTGAGGAGACAGACGAATGTTGTTTGGGCTCAGCAAGTCTTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| CDS-3UTR CCA 90 bp | AAATTGCTTACAGTGACAAACACAACAGGGGAAACTTTCTGCTTTCAAGACAGATCCTGGCCAGAGCAATaGCGGCGATGCCTGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: KLLTVTNTTGETFCFQDRSWPEQ*RRCLVG Trigger: GCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGA...TCTGTCTTGAAAGCAGAAAGTTTCCCCTGTTGTGTTTGTCACTGTAAGCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| CDS-3UTR CCA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCCCCAGGCTGAGCACTTaGCATCCAAGGCACTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCPRLST*HPRHCR Trigger: CCTACAGTGCCTTGGATGCCAAGTGCTCAGCCTGGG...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR GCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTGAGCAATGGCGGCGATaGCTGGTAGGCAGATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VHASQKCWRYFVKFVLQTEQWRR*LVGRWL Trigger: CAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTC...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR GCA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCTCTCTGGCCACTTGGTaGAGCCTTCGGTTTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCSLATW*SLRFSW Trigger: CCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGA...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR GCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTGGGGCACAAAGAAGATaGTGTCCTCGGGCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VHASQKCWRYFVKFVLQTGAQRR*CPRAQG Trigger: GCCCTGAGCCCGAGGACAGCATCTTCTTTGTGCCCC...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CCA 90 bp | CCTCACTCCAAAACCCATCCCATATCAGGAGGATTCACCTATTCTATCTTGATTCCACTTCCTTGTCCTTaGGCTTCCGGAAGCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PHSKTHPISGGFTYSILIPLPCP*ASGSRV Trigger: TACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGTGG...AATCAAGATAGAATAGGTGAATCCTCCTGATATGGGATGGGTTTTGGAGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CCA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCAGCCATCCAGGTATCTaGATGTCTCTTCCTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCSHPGI*MSLPAA Trigger: GGCGGCAGGAAGAGACATCCAGATACCTGGATGGCT...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CCA 90 bp | CCTCACTCCAAAACCCATCCCATATCAGGAGGATTCACCTATTCTATCTTGATTAGCCATCCAGGTATCTaGATGTCTCTTCCTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: PHSKTHPISGGFTYSILISHPGI*MSLPAA Trigger: GGCGGCAGGAAGAGACATCCAGATACCTGGATGGCT...AATCAAGATAGAATAGGTGAATCCTCCTGATATGGGATGGGTTTTGGAGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR TCA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTAGACCAGGAAAACACTaGCCAGGGCCACCACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFRPGKH*PGPPPA Trigger: GGCTGGTGGTGGCCCTGGTCAGTGTTTTCCTGGTCT...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR GCA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTGGGGCACAAAGAAGATaGTGTCCTCGGGCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFGAQRR*CPRAQG Trigger: GCCCTGAGCCCGAGGACAGCATCTTCTTTGTGCCCC...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CCA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTTGCCTGGTAGGCAGATaGCTGGCCCGATGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFCLVGR*LARWPT Trigger: TGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCA...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTAGCCTTCGGTTTTCCTaGCCAGAGCAATGGCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VHASQKCWRYFVKFVLQTSLRFS*PEQWRR Trigger: TCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCT...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR TCA 90 bp | TCATACAAAGTTTTCATAGAGCTCAGGACTAATGGATTGACTTGTAGTCTCATAAGACCAGGAAAACACTaGCCAGGGCCACCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYKVFIELRTNGLTCSLIRPGKH*PGPPPA Trigger: GGCTGGTGGTGGCCCTGGTCAGTGTTTTCCTGGTCT...TATGAGACTACAAGTCAATCCATTAGTCCTGAGCTCTATGAAAACTTTGTATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR GCA 90 bp | TCATACAAAGTTTTCATAGAGCTCAGGACTAATGGATTGACTTGTAGTCTCATAGAGCAATGGCGGCGATaGCTGGTAGGCAGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYKVFIELRTNGLTCSLIEQWRR*LVGRWL Trigger: CAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTC...TATGAGACTACAAGTCAATCCATTAGTCCTGAGCTCTATGAAAACTTTGTATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CCA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTAGATGGCTGGCCCGATaGCCAACAGAGGGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFRWLAR*PTEGCS Trigger: GGAACATCCCTCTGTTGGCCATCGGGCCAGCCATCT...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CCA 90 bp | AGAATTAGGATTTTTAAGAGCATAATCCTTAAGAGAGGACAGTTGCCACACTTACTCACCTGGTCCCTGTaGGAGCTGCTTGCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIRIFKSIILKRGQLPHLLTWSL*ELLASE Trigger: CTCAGAGGCAAGCAGCTCCCACAGGGACCAGGTGAG...TAAGTGTGGCAACTGTCCTCTCTTAAGGATTATGCTCTTAAAAATCCTAATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS-3UTR CCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTTCCTGCCGCCCACTCTaGACTAGACTCTGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHASQKCWRYFVKFVLQTSCRPL*TRLWHS Trigger: AGAATGCCAGAGTCTAGTCCAGAGTGGGCGGCAGGA...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CCA 90 bp | AGAATTAGGATTTTTAAGAGCATAATCCTTAAGAGAGGACAGTTGCCACACTTAAGATGGCTGGCCCGATaGCCAACAGAGGGATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RIRIFKSIILKRGQLPHLRWLAR*PTEGCS Trigger: GGAACATCCCTCTGTTGGCCATCGGGCCAGCCATCT...TAAGTGTGGCAACTGTCCTCTCTTAAGGATTATGCTCTTAAAAATCCTAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS-3UTR CCA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTCAGACTATTGTCTCGTaGTCCCACCTGCCTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFQTIVS*SHLPWL Trigger: GAGCCAAGGCAGGTGGGACCACGAGACAATAGTCTG...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR TCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTTGTAGGAGCAAACGATaGTACTGTCCTGGGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VHASQKCWRYFVKFVLQTCRSKR*YCPGAQ Trigger: TTGTGCCCCAGGACAGTATCATCGTTTGCTCCTACA...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CCA 90 bp | AGAATTAGGATTTTTAAGAGCATAATCCTTAAGAGAGGACAGTTGCCACACTTACCACTTCCTTGTCCTTaGGCTTCCGGAAGCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RIRIFKSIILKRGQLPHLPLPCP*ASGSRV Trigger: TACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGTGG...TAAGTGTGGCAACTGTCCTCTCTTAAGGATTATGCTCTTAAAAATCCTAATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS-3UTR CCA 90 bp | TCATACAAAGTTTTCATAGAGCTCAGGACTAATGGATTGACTTGTAGTCTCATACAGACTATTGTCTCGTaGTCCCACCTGCCTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYKVFIELRTNGLTCSLIQTIVS*SHLPWL Trigger: GAGCCAAGGCAGGTGGGACCACGAGACAATAGTCTG...TATGAGACTACAAGTCAATCCATTAGTCCTGAGCTCTATGAAAACTTTGTATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| 3UTR CAA 72 bp | CCCAAACAACATTCGTCTGTCTCCTCACGTCTAAAATaGCTTACAGTGACAAACACAACAGGGGAAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKQHSSVSSRLK*LTVTNTTGETF Trigger: GAAAGTTTCCCCTGTTGTGTTTGTCACTGTAAGCAATTTTAGACGTGAGGAGACAGACGAATGTTGTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS-3UTR GCA 90 bp | AGAATTAGGATTTTTAAGAGCATAATCCTTAAGAGAGGACAGTTGCCACACTTACTTGCCTCTGAGGCCTaGCTTCTTAGCCAGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RIRIFKSIILKRGQLPHLLASEA*LLSQFI Trigger: GATGAACTGGCTAAGAAGGCAGGCCTCAGAGGCAAG...TAAGTGTGGCAACTGTCCTCTCTTAAGGATTATGCTCTTAAAAATCCTAATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS-3UTR CCA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTACGATGATACTGTCCTaGGGCACAAAGAAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHASQKCWRYFVKFVLQTTMILS*GTKKML Trigger: CAGCATCTTCTTTGTGCCCCAGGACAGTATCATCGT...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR TCA 90 bp | AGAATTAGGATTTTTAAGAGCATAATCCTTAAGAGAGGACAGTTGCCACACTTATGTAGGAGCAAACGATaGTACTGTCCTGGGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RIRIFKSIILKRGQLPHLCRSKR*YCPGAQ Trigger: TTGTGCCCCAGGACAGTATCATCGTTTGCTCCTACA...TAAGTGTGGCAACTGTCCTCTCTTAAGGATTATGCTCTTAAAAATCCTAATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
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| CDS-3UTR CCA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTACGATGATACTGTCCTaGGGCACAAAGAAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFTMILS*GTKKML Trigger: CAGCATCTTCTTTGTGCCCCAGGACAGTATCATCGT...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| 3UTR CAA 72 bp | AGGATTTTTAAGAGCATAATCCTTAAGAGAGGACAGTaGCCACACTTAAGAATCAACAGGGCTGGATTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIFKSIILKRGQ*PHLRINRAGFK Trigger: TTTAAATCCAGCCCTGTTGATTCTTAAGTGTGGCAACTGTCCTCTCTTAAGGATTATGCTCTTAAAAATCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS CCA 90 bp | CCAGAGCAATGGCGGCGATGCCTGGTAGGCAGATGGCTGGCCCGATaGCCAACAGAGGGATGTTCCCCAGAGTTTCCCCCTTCATGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PEQWRRCLVGRWLAR*PTEGCSPEFPPSCQ Trigger: CTGGCATGAAGGGGGAAACTCTGGGGAACATCCCTCTGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS CCA 90 bp | CGGTTTTCCTGGCCAGAGCAATGGCGGCGATGCCTGGTAGGCAGATaGCTGGCCCGATGGCCAACAGAGGGATGTTCCCCAGAGTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RFSWPEQWRRCLVGR*LARWPTEGCSPEFP Trigger: GGGAAACTCTGGGGAACATCCCTCTGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 90 bp | TCTCTGGCCACTTGGTGCAGCCTTCGGTTTTCCTGGCCAGAGCAATaGCGGCGATGCCTGGTAGGCAGATGGCTGGCCCGATGGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: SLATWCSLRFSWPEQ*RRCLVGRWLARWPT Trigger: TGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS GCA 90 bp | ACTTGGTGCAGCCTTCGGTTTTCCTGGCCAGAGCAATGGCGGCGATaGCTGGTAGGCAGATGGCTGGCCCGATGGCCAACAGAGGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TWCSLRFSWPEQWRR*LVGRWLARWPTEGC Trigger: ACATCCCTCTGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS GCA 90 bp | GTAACGGAGCTGGCCATAGGCACCTCACCTGGTCCCTGTGGGAGCTaGTTGCCTCTGAGGCCTGCCTTCTTAGCCAGTTCATCCGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTELAIGTSPGPCGS*LPLRPAFLASSSEL Trigger: GAGCTCGGATGAACTGGCTAAGAAGGCAGGCCTCAGAGGCAAGCAGCTCCCACAGGGACCAGGTGAGGTGCCTATGGCCAGCTCCGTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 90 bp | AGAGTAGCTCATTCTCTGGCCACTTGGTGCAGCCTTCGGTTTTCCTaGCCAGAGCAATGGCGGCGATGCCTGGTAGGCAGATGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RVAHSLATWCSLRFS*PEQWRRCLVGRWLA Trigger: GGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS GCA 90 bp | AGGGTAACTTGCGGACCCAGAGTAGCTCATTCTCTGGCCACTTGGTaGAGCCTTCGGTTTTCCTGGCCAGAGCAATGGCGGCGATGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RVTCGPRVAHSLATW*SLRFSWPEQWRRCL Trigger: CAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCAAGTTACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 90 bp | AGCAGGGTAACTTGCGGACCCAGAGTAGCTCATTCTCTGGCCACTTaGTGCAGCCTTCGGTTTTCCTGGCCAGAGCAATGGCGGCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SRVTCGPRVAHSLAT*CSLRFSWPEQWRRC Trigger: GCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCAAGTTACCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 90 bp | CCCAGGCTGAGCACTTGGCATCCAAGGCACTGTAGGCGAGGGAACTaGCCGAGGGGCAATAGCCATCCAGGTATCTGGATGTCTCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRLSTWHPRHCRRGN*PRGNSHPGIWMSLP Trigger: AGGAAGAGACATCCAGATACCTGGATGGCTATTGCCCCTCGGCCAGTTCCCTCGCCTACAGTGCCTTGGATGCCAAGTGCTCAGCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 90 bp | CCAGGTCTGATGGGGTCCTCAGGAGTTCCACCACTTCCTTGTCCTTaGGCTTCCGGAAGCAGGGTAACTTGCGGACCCAGAGTAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGLMGSSGVPPLPCP*ASGSRVTCGPRVAH Trigger: ATGAGCTACTCTGGGTCCGCAAGTTACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGTGGTGGAACTCCTGAGGACCCCATCAGACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 90 bp | TGTAGGCGAGGGAACTGGCCGAGGGGCAATAGCCATCCAGGTATCTaGATGTCTCTTCCTGCCGCCCACTCTGGACTAGACTCTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: CRRGNWPRGNSHPGI*MSLPAAHSGLDSGI Trigger: AATGCCAGAGTCTAGTCCAGAGTGGGCGGCAGGAAGAGACATCCAGATACCTGGATGGCTATTGCCCCTCGGCCAGTTCCCTCGCCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 90 bp | AGGTATCTGGATGTCTCTTCCTGCCGCCCACTCTGGACTAGACTCTaGCATTCTCCTTCCTCTGTAGGAGTGGGGGTAGTAACGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RYLDVSSCRPLWTRL*HSPSSVGVGVVTEL Trigger: CAGCTCCGTTACTACCCCCACTCCTACAGAGGAAGGAGAATGCCAGAGTCTAGTCCAGAGTGGGCGGCAGGAAGAGACATCCAGATACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CAA 90 bp | CAGGTAAGACTTGCTGAGCCCAAACAACATTCGTCTGTCTCCTCACGTCTAAAACCCTGTGGGAGCTGCTaGCCTCTGAGGCCTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVRLAEPKQHSSVSSRLKPCGSC*PLRPAF Trigger: GAAGGCAGGCCTCAGAGGCAAGCAGCTCCCACAGGG...TTTTAGACGTGAGGAGACAGACGAATGTTGTTTGGGCTCAGCAAGTCTTACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS-3UTR CAA 90 bp | GTTTCATTGCATTCTCATCATGGTTGGGGGAGGGGCGCTGTTGAACAAATGTATCGGAAGCAGGGTAACTaGCGGACCCAGAGTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLHSHHGWGRGAVEQMYRKQGN*RTQSSS Trigger: TGAGCTACTCTGGGTCCGCAAGTTACCCTGCTTCCG...ATACATTTGTTCAACAGCGCCCCTCCCCCAACCATGATGAGAATGCAATGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CAA 90 bp | CCTCACTCCAAAACCCATCCCATATCAGGAGGATTCACCTATTCTATCTTGATTCGGAAGCAGGGTAACTaGCGGACCCAGAGTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PHSKTHPISGGFTYSILIRKQGN*RTQSSS Trigger: TGAGCTACTCTGGGTCCGCAAGTTACCCTGCTTCCG...AATCAAGATAGAATAGGTGAATCCTCCTGATATGGGATGGGTTTTGGAGTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CAA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCGTGGTCCCACCTGCCTaGGCTCTGGTTGATGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCVVPPA*ALVDVA Trigger: TGCTACATCAACCAGAGCCAAGGCAGGTGGGACCAC...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS-3UTR CAA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCTCATCCGAGCTCCCTTaGCCTGACTCCAGGTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCSSELP*PDSRSD Trigger: ATCAGACCTGGAGTCAGGCAAAGGGAGCTCGGATGA...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CAA 90 bp | TCATACAAAGTTTTCATAGAGCTCAGGACTAATGGATTGACTTGTAGTCTCATACCCTGTGGGAGCTGCTaGCCTCTGAGGCCTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SYKVFIELRTNGLTCSLIPCGSC*PLRPAF Trigger: GAAGGCAGGCCTCAGAGGCAAGCAGCTCCCACAGGG...TATGAGACTACAAGTCAATCCATTAGTCCTGAGCTCTATGAAAACTTTGTATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTACTGTCTCTTCCCAGTGTCCTTAATTCTCCGTACTTCCCTAAACTATGCTCATTCTCTGGCCACTaGGTGCAGCCTTCGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLSLPSVLNSPYFPKLCSFSGH*VQPSVF Trigger: GAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGA...GCATAGTTTAGGGAAGTACGGAGAATTAAGGACACTGGGAAGAGACAGTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCATTGCATTCTCATCATGGTTGGGGGAGGGGCGCTGTTGAACAAATGTATGTCATAGGGGCTGTTTaGCTTGTAGGAGCAAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: VSLHSHHGWGRGAVEQMYVIGAV*LVGAND Trigger: ATCGTTTGCTCCTACAAGCAAAACAGCCCCTATGAC...ATACATTTGTTCAACAGCGCCCCTCCCCCAACCATGATGAGAATGCAATGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CAA 90 bp | TTACCTGACAGCAAGCACTTTTTGGGCTGTTTTACAAAGCAATCAACATTGTTTGTGGTCCCACCTGCCTaGGCTCTGGTTGATGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPDSKHFLGCFTKQSTLFVVPPA*ALVDVA Trigger: TGCTACATCAACCAGAGCCAAGGCAGGTGGGACCAC...AAACAATGTTGATTGCTTTGTAAAACAGCCCAAAAAGTGCTTGCTGTCAGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS-3UTR CAA 90 bp | AAATTGCTTACAGTGACAAACACAACAGGGGAAACTTTCTGCTTTCAAGACAGATCATTCTCTGGCCACTaGGTGCAGCCTTCGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLLTVTNTTGETFCFQDRSFSGH*VQPSVF Trigger: GAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGA...TCTGTCTTGAAAGCAGAAAGTTTCCCCTGTTGTGTTTGTCACTGTAAGCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049655.3 |
||
| CDS-3UTR CAA 90 bp | GTACATGCCTCCCAGAAATGCTGGAGGTACTTTGTAAAATTTGTCTTACAAACTGTCATAGGGGCTGTTTaGCTTGTAGGAGCAAACGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHASQKCWRYFVKFVLQTVIGAV*LVGAND Trigger: ATCGTTTGCTCCTACAAGCAAAACAGCCCCTATGAC...AGTTTGTAAGACAAATTTTACAAAGTACCTCCAGCATTTCTGGGAGGCATGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS CCA 72 bp | TGGCCAGAGCAATGGCGGCGATGCCTGGTAGGCAGATaGCTGGCCCGATGGCCAACAGAGGGATGTTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPEQWRRCLVGR*LARWPTEGCSP Trigger: TGGGGAACATCCCTCTGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS GCA 72 bp | AGCCTTCGGTTTTCCTGGCCAGAGCAATGGCGGCGATaGCTGGTAGGCAGATGGCTGGCCCGATGGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SLRFSWPEQWRR*LVGRWLARWPT Trigger: TGTTGGCCATCGGGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
||
| CDS CCA 72 bp | ACTTGGTGCAGCCTTCGGTTTTCCTGGCCAGAGCAATaGCGGCGATGCCTGGTAGGCAGATGGCTGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: TWCSLRFSWPEQ*RRCLVGRWLAR Trigger: TCGGGCCAGCCATCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS GCA 72 bp | CTGGCCATAGGCACCTCACCTGGTCCCTGTGGGAGCTaGTTGCCTCTGAGGCCTGCCTTCTTAGCCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LAIGTSPGPCGS*LPLRPAFLASS Trigger: TGAACTGGCTAAGAAGGCAGGCCTCAGAGGCAAGCAGCTCCCACAGGGACCAGGTGAGGTGCCTATGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS GCA 72 bp | TGCGGACCCAGAGTAGCTCATTCTCTGGCCACTTGGTaGAGCCTTCGGTTTTCCTGGCCAGAGCAATGGCGG | + |
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Preference number: 6 (lower is better) Translates to: CGPRVAHSLATW*SLRFSWPEQWR Trigger: CCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 72 bp | CATTCTCTGGCCACTTGGTGCAGCCTTCGGTTTTCCTaGCCAGAGCAATGGCGGCGATGCCTGGTAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HSLATWCSLRFS*PEQWRRCLVGR Trigger: TCTGCCTACCAGGCATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 72 bp | GGGAACTGGCCGAGGGGCAATAGCCATCCAGGTATCTaGATGTCTCTTCCTGCCGCCCACTCTGGACTAGAC | + |
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Preference number: 6 (lower is better) Translates to: GNWPRGNSHPGI*MSLPAAHSGLD Trigger: GTCTAGTCCAGAGTGGGCGGCAGGAAGAGACATCCAGATACCTGGATGGCTATTGCCCCTCGGCCAGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 90 bp | CCTGACTCCAGGTCTGATGGGGTCCTCAGGAGTTCCACCACTTCCTaGTCCTTGGGCTTCCGGAAGCAGGGTAACTTGCGGACCCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: PDSRSDGVLRSSTTS*SLGFRKQGNLRTQS Trigger: ACTCTGGGTCCGCAAGTTACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGTGGTGGAACTCCTGAGGACCCCATCAGACCTGGAGTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 90 bp | AAGCAGGGTAACTTGCGGACCCAGAGTAGCTCATTCTCTGGCCACTaGGTGCAGCCTTCGGTTTTCCTGGCCAGAGCAATGGCGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: KQGNLRTQSSSFSGH*VQPSVFLARAMAAM Trigger: CATCGCCGCCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCAAGTTACCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 90 bp | TTGCCTCTGAGGCCTGCCTTCTTAGCCAGTTCATCCGAGCTCCCTTaGCCTGACTCCAGGTCTGATGGGGTCCTCAGGAGTTCCACCACT | + |
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Preference number: 6 (lower is better) Translates to: LPLRPAFLASSSELP*PDSRSDGVLRSSTT Trigger: AGTGGTGGAACTCCTGAGGACCCCATCAGACCTGGAGTCAGGCAAAGGGAGCTCGGATGAACTGGCTAAGAAGGCAGGCCTCAGAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 72 bp | ATGGGGTCCTCAGGAGTTCCACCACTTCCTTGTCCTTaGGCTTCCGGAAGCAGGGTAACTTGCGGACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: MGSSGVPPLPCP*ASGSRVTCGPR Trigger: TCTGGGTCCGCAAGTTACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGTGGTGGAACTCCTGAGGACCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 72 bp | AGCACTTGGCATCCAAGGCACTGTAGGCGAGGGAACTaGCCGAGGGGCAATAGCCATCCAGGTATCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: STWHPRHCRRGN*PRGNSHPGIWM Trigger: CATCCAGATACCTGGATGGCTATTGCCCCTCGGCCAGTTCCCTCGCCTACAGTGCCTTGGATGCCAAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 72 bp | AGGTCTGATGGGGTCCTCAGGAGTTCCACCACTTCCTaGTCCTTGGGCTTCCGGAAGCAGGGTAACTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: RSDGVLRSSTTS*SLGFRKQGNLR Trigger: CCGCAAGTTACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGTGGTGGAACTCCTGAGGACCCCATCAGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 72 bp | AGGCCTGCCTTCTTAGCCAGTTCATCCGAGCTCCCTTaGCCTGACTCCAGGTCTGATGGGGTCCTCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RPAFLASSSELP*PDSRSDGVLRS Trigger: ACTCCTGAGGACCCCATCAGACCTGGAGTCAGGCAAAGGGAGCTCGGATGAACTGGCTAAGAAGGCAGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 90 bp | AGTTCCACCACTTCCTTGTCCTTGGGCTTCCGGAAGCAGGGTAACTaGCGGACCCAGAGTAGCTCATTCTCTGGCCACTTGGTGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSTTSLSLGFRKQGN*RTQSSSFSGHLVQP Trigger: AGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCAAGTTACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGTGGTGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CCA 72 bp | ACTTGCGGACCCAGAGTAGCTCATTCTCTGGCCACTTaGTGCAGCCTTCGGTTTTCCTGGCCAGAGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: TCGPRVAHSLAT*CSLRFSWPEQW Trigger: CCATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 72 bp | AACTTGCGGACCCAGAGTAGCTCATTCTCTGGCCACTaGGTGCAGCCTTCGGTTTTCCTGGCCAGAGCAATG | + |
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Preference number: 6 (lower is better) Translates to: NLRTQSSSFSGH*VQPSVFLARAM Trigger: CATTGCTCTGGCCAGGAAAACCGAAGGCTGCACCAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 72 bp | ACTTCCTTGTCCTTGGGCTTCCGGAAGCAGGGTAACTaGCGGACCCAGAGTAGCTCATTCTCTGGCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: TSLSLGFRKQGN*RTQSSSFSGHL Trigger: CAAGTGGCCAGAGAATGAGCTACTCTGGGTCCGCAAGTTACCCTGCTTCCGGAAGCCCAAGGACAAGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS TCA 72 bp | CTATTGTCTCGTGGTCCCACCTGCCTTGGCTCTGGTTaGTGTAGCAACAGTATCTGTCATAGGGGCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LLSRGPTCLGSG*CSNSICHRGCF Trigger: AAAACAGCCCCTATGACAGATACTGTTGCTACATCAACCAGAGCCAAGGCAGGTGGGACCACGAGACAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 90 bp | TTGGCTCTGGTTGATGTAGCAACAGTATCTGTCATAGGGGCTGTTTaGCTTGTAGGAGCAAACGATGATACTGTCCTGGGGCACAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LALVDVATVSVIGAV*LVGANDDTVLGHKE Trigger: TTCTTTGTGCCCCAGGACAGTATCATCGTTTGCTCCTACAAGCAAAACAGCCCCTATGACAGATACTGTTGCTACATCAACCAGAGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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| CDS CAA 72 bp | GTTGATGTAGCAACAGTATCTGTCATAGGGGCTGTTTaGCTTGTAGGAGCAAACGATGATACTGTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VDVATVSVIGAV*LVGANDDTVLG Trigger: CCCCAGGACAGTATCATCGTTTGCTCCTACAAGCAAAACAGCCCCTATGACAGATACTGTTGCTACATCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049655.3 ENSMUST00000179526.2 |
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