Pregenerated sensors for TMEM213 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029829

Ensembl transcript IDs: ENSMUST00000031851.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGGACCAGGCTGAAGAGGAGGGCGGCCTGCGGGGCAGAGGTGAGGTaGCCAGGGTTTCGGAGGAAGACACCTGACTGGGCCATGTTGCTG	+
Preference number: 5 (lower is better) Translates to: RTRLKRRAACGAEVR*PGFRRKTPDWAMLL Trigger: CAGCAACATGGCCCAGTCAGGTGTCTTCCTCCGAAACCCTGGGCACCTCACCTCTGCCCCGCAGGCCGCCCTCCTCTTCAGCCTGGTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS CCA 90 bp	CTCAGGGTTGAGTTGCTGCTGCTGGTTTCTGTACCGCAGGATAAGTaGAAGGAGGTGAGGACCAGGCTGAAGAGGAGGGCGGCCTGCGGG	+
Preference number: 5 (lower is better) Translates to: LRVELLLLVSVPQDK*KEVRTRLKRRAACG Trigger: CCCGCAGGCCGCCCTCCTCTTCAGCCTGGTCCTCACCTCCTTCCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTCAACCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS CAA 90 bp	TGCTCCAGGGTCCCGGGGTCTGGGTGGTGTGCACTCAGGGTTGAGTaGCTGCTGCTGGTTTCTGTACCGCAGGATAAGTGGAAGGAGGTG	+
Preference number: 6 (lower is better) Translates to: CSRVPGSGWCALRVE*LLLVSVPQDKWKEV Trigger: CACCTCCTTCCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTCAACCCTGAGTGCACACCACCCAGACCCCGGGACCCTGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS CAA 90 bp	CACACTGCTCCAGGGTCCCGGGGTCTGGGTGGTGTGCACTCAGGGTaGAGTTGCTGCTGCTGGTTTCTGTACCGCAGGATAAGTGGAAGG	+
Preference number: 6 (lower is better) Translates to: HTAPGSRGLGGVHSG*SCCCWFLYRRISGR Trigger: CCTTCCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTCAACCCTGAGTGCACACCACCCAGACCCCGGGACCCTGGAGCAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS CAA 72 bp	GTCCCGGGGTCTGGGTGGTGTGCACTCAGGGTTGAGTaGCTGCTGCTGGTTTCTGTACCGCAGGATAAGTGG	+
Preference number: 6 (lower is better) Translates to: VPGSGWCALRVE*LLLVSVPQDKW Trigger: CCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTCAACCCTGAGTGCACACCACCCAGACCCCGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS GCA 72 bp	CGGGGTCTGGGTGGTGTGCACTCAGGGTTGAGTTGCTaGTGCTGGTTTCTGTACCGCAGGATAAGTGGAAGG	+
Preference number: 6 (lower is better) Translates to: RGLGGVHSGLSC*CWFLYRRISGR Trigger: CCTTCCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTCAACCCTGAGTGCACACCACCCAGACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS GCA 72 bp	TCCCGGGGTCTGGGTGGTGTGCACTCAGGGTTGAGTTaGTGCTGCTGGTTTCTGTACCGCAGGATAAGTGGA	+
Preference number: 6 (lower is better) Translates to: SRGLGGVHSGLS*CCWFLYRRISG Trigger: TCCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTCAACCCTGAGTGCACACCACCCAGACCCCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS CCA 72 bp	GAGTTGCTGCTGCTGGTTTCTGTACCGCAGGATAAGTaGAAGGAGGTGAGGACCAGGCTGAAGAGGAGGGCG	+
Preference number: 6 (lower is better) Translates to: ELLLLVSVPQDK*KEVRTRLKRRA Trigger: CGCCCTCCTCTTCAGCCTGGTCCTCACCTCCTTCCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031851.5
CDS GCA 72 bp	GGTCTGGGTGGTGTGCACTCAGGGTTGAGTTGCTGCTaGTGGTTTCTGTACCGCAGGATAAGTGGAAGGAGG	+
Preference number: 6 (lower is better) Translates to: GLGGVHSGLSCC*WFLYRRISGRR Trigger: CCTCCTTCCACTTATCCTGCGGTACAGAAACCAGCAGCAGCAACTCAACCCTGAGTGCACACCACCCAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031851.5