Pregenerated sensors for TMEM211 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066964Ensembl transcript IDs: ENSMUST00000086615.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTTTAGAGCAGTGGTCCCTGGGGGCTGGTCCTGGCTCAAAGTTTaGGGGTACAGTGTCTGTCTTGGAGGGAAGACATGGCCGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KFRAVVPGGWSWLKV*GYSVCLGGKTWPQE Trigger: CTCCTGCGGCCATGTCTTCCCTCCAAGACAGACACTGTACCCTCAAACTTTGAGCCAGGACCAGCCCCCAGGGACCACTGCTCTAAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CCA 90 bp | AGGGTCCTGAGCCCCACCCAGCTGGGAGCAGCTTCCAGCACACAATaGGTCATAACTCATGGCAAATCAAAGTCCTTCATGACACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: RVLSPTQLGAASSTQ*VITHGKSKSFMTPP Trigger: TGGGGGTGTCATGAAGGACTTTGATTTGCCATGAGTTATGACCCATTGTGTGCTGGAAGCTGCTCCCAGCTGGGTGGGGCTCAGGACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR TCA 90 bp | TCTATTCATCAGTTCTTTACTTACATGGACTGTGGGAAAGGGTCCTaGGCCCCACCCAGCTGGGAGCAGCTTCCAGCACACAATGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SIHQFFTYMDCGKGS*APPSWEQLPAHNGS Trigger: TGACCCATTGTGTGCTGGAAGCTGCTCCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CCA 90 bp | CACAGTTTTCTCCTCTATTCATCAGTTCTTTACTTACATGGACTGTaGGAAAGGGTCCTGAGCCCCACCCAGCTGGGAGCAGCTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: HSFLLYSSVLYLHGL*ERVLSPTQLGAASS Trigger: GCTGGAAGCTGCTCCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAACTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CCA 90 bp | GAAGCAGCACAGTTTTCTCCTCTATTCATCAGTTCTTTACTTACATaGACTGTGGGAAAGGGTCCTGAGCCCCACCCAGCTGGGAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: EAAQFSPLFISSLLT*TVGKGPEPHPAGSS Trigger: GCTGCTCCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAACTGTGCTGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CCA 90 bp | AAACTTCTTCCAGGTGACTCTGGATCTGGATCAAGTTTAGAGCAGTaGTCCCTGGGGGCTGGTCCTGGCTCAAAGTTTGAGGGTACAGTG | + |
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Preference number: 1 (lower is better) Translates to: KLLPGDSGSGSSLEQ*SLGAGPGSKFEGTV Trigger: CACTGTACCCTCAAACTTTGAGCCAGGACCAGCCCCCAGGGACCACTGCTCTAAACTTGATCCAGATCCAGAGTCACCTGGAAGAAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTTTACTTACATGGACTGTGGGAAAGGGTCCTGAGCCCCACCCAGCTGGGAAAGGGAAACTGACTTaGCTGAGGTCACACAGCATG | + |
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Preference number: 2 (lower is better) Translates to: SSLLTWTVGKGPEPHPAGKGKLT*LRSHSM Trigger: CATGCTGTGTGACCTCAGGCAAGTCAGTTTCCCTTT...CCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAACAAACTTCTTCCAGGTGACTCTGGATCTGGATCAAGTTTAGAGCAGTGGAATCAAAGTCCTTCATaGCACCCCCACAAAGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: PNKLLPGDSGSGSSLEQWNQSPS*HPHKVG Trigger: GCCTACTTTGTGGGGGTGTCATGAAGGACTTTGATT...CCACTGCTCTAAACTTGATCCAGATCCAGAGTCACCTGGAAGAAGTTTGTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTTCTCCTCTATTCATCAGTTCTTTACTTACATGGACTGTGGGAAAGGGTGCTTCCAGCACACAATaGGTCATAACTCATGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: QFSPLFISSLLTWTVGKGASSTQ*VITHGK Trigger: TTTGCCATGAGTTATGACCCATTGTGTGCTGGAAGC...ACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTTCTCCTCTATTCATCAGTTCTTTACTTACATGGACTGTGGGAAAGGGTATGGGTCATAACTCATaGCAAATCAAAGTCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: QFSPLFISSLLTWTVGKGMGHNS*QIKVLH Trigger: ATGAAGGACTTTGATTTGCCATGAGTTATGACCCAT...ACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CCA 72 bp | TCCAGGGCACAGTCCATCATGGTGGGGGAGACTAGGTaGCAGGCGCTTGCAGCAGCTGGTCATGCCATATCC | + |
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Preference number: 3 (lower is better) Translates to: SRAQSIMVGETR*QALAAAGHAIS Trigger: GGATATGGCATGACCAGCTGCTGCAAGCGCCTGCCACCTAGTCTCCCCCACCATGATGGACTGTGCCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR TCA 72 bp | GCAGTGGTCCCTGGGGGCTGGTCCTGGCTCAAAGTTTaGGGGTACAGTGTCTGTCTTGGAGGGAAGACATGG | + |
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Preference number: 3 (lower is better) Translates to: AVVPGGWSWLKV*GYSVCLGGKTW Trigger: CCATGTCTTCCCTCCAAGACAGACACTGTACCCTCAAACTTTGAGCCAGGACCAGCCCCCAGGGACCACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR TCA 72 bp | CAGTTCTTTACTTACATGGACTGTGGGAAAGGGTCCTaGGCCCCACCCAGCTGGGAGCAGCTTCCAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: QFFTYMDCGKGS*APPSWEQLPAH Trigger: GTGTGCTGGAAGCTGCTCCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CCA 72 bp | CCAGGTGACTCTGGATCTGGATCAAGTTTAGAGCAGTaGTCCCTGGGGGCTGGTCCTGGCTCAAAGTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: PGDSGSGSSLEQ*SLGAGPGSKFE Trigger: CTCAAACTTTGAGCCAGGACCAGCCCCCAGGGACCACTGCTCTAAACTTGATCCAGATCCAGAGTCACCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR TCA 72 bp | GAAAGTCTCTCACTGGCATGCCCGGAGACTGCTTTCTaGGGTGATTCCTGGTCCTGTCACGGTGACAATCAA | + |
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Preference number: 3 (lower is better) Translates to: ESLSLACPETAF*GDSWSCHGDNQ Trigger: TTGATTGTCACCGTGACAGGACCAGGAATCACCTCAGAAAGCAGTCTCCGGGCATGCCAGTGAGAGACTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CCA 72 bp | GGGAGCAGCTTCCAGCACACAATGGGTCATAACTCATaGCAAATCAAAGTCCTTCATGACACCCCCACAAAG | + |
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Preference number: 3 (lower is better) Translates to: GSSFQHTMGHNS*QIKVLHDTPTK Trigger: CTTTGTGGGGGTGTCATGAAGGACTTTGATTTGCCATGAGTTATGACCCATTGTGTGCTGGAAGCTGCTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR TCA 72 bp | TACAAACAAGATGATCCCCAACAAACTTCTTCCAGGTaGCTCTGGATCTGGATCAAGTTTAGAGCAGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: YKQDDPQQTSSR*LWIWIKFRAVV Trigger: GACCACTGCTCTAAACTTGATCCAGATCCAGAGTCACCTGGAAGAAGTTTGTTGGGGATCATCTTGTTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTTTCTCCTCTATTCATCAGTTCTTTACTTACATGGACTGTGGGAAAGGGTATTGTTGTTTGTCTTTaGCTTTCCCTGGGTGACACT | + |
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Preference number: 3 (lower is better) Translates to: QFSPLFISSLLTWTVGKGIVVCL*LSLGDT Trigger: AGTGTCACCCAGGGAAAGCAAAAGACAAACAACAAT...ACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR TCA 90 bp | AGTTCTTTACTTACATGGACTGTGGGAAAGGGTCCTGAGCCCCACCCAGCTGGGGGCCAGACATGCCGGTaGGAGAGAGTCCCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSLLTWTVGKGPEPHPAGGQTCR*ERVPEQ Trigger: CTGCTCTGGGACTCTCTCTCACCGGCATGTCTGGCC...CCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR TCA 90 bp | AGTTCTTTACTTACATGGACTGTGGGAAAGGGTCCTGAGCCCCACCCAGCTGGGGGCCAGTGCCCAGGCTaGGAGGAGAAGAGCGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SSLLTWTVGKGPEPHPAGGQCPG*EEKSAD Trigger: ATCAGCGCTCTTCTCCTCTCAGCCTGGGCACTGGCC...CCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR GCA 90 bp | TCCCTGGGGGCTGGTCCTGGCTCAAAGTTTGAGGGTACAGTGTCTGTCTTGGAGGGAGAAGGGGACGGCTaGTCTCTGGACTGTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLGAGPGSKFEGTVSVLEGEGDG*SLDCGH Trigger: GTGACCACAGTCCAGAGAGCAGCCGTCCCCTTCTCC...CTCCAAGACAGACACTGTACCCTCAAACTTTGAGCCAGGACCAGCCCCCAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| 3UTR CAA 72 bp | AGCAGTGGTCCCTGGGGGCTGGTCCTGGCTCAAAGTTaGAGGGTACAGTGTCTGTCTTGGAGGGAAGACATG | + |
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Preference number: 4 (lower is better) Translates to: SSGPWGLVLAQS*RVQCLSWREDM Trigger: CATGTCTTCCCTCCAAGACAGACACTGTACCCTCAAACTTTGAGCCAGGACCAGCCCCCAGGGACCACTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CCA 90 bp | ACTTGCCTGAGGTCACACAGCATGGTAGCAGATAAGGTGGGATATGAACCTGAGGGGACGGCTGCTCTCTaGACTGTGGTCACTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TCLRSHSMVADKVGYEPEGTAAL*TVVTCH Trigger: GTGGCAAGTGACCACAGTCCAGAGAGCAGCCGTCCC...CTCAGGTTCATATCCCACCTTATCTGCTACCATGCTGTGTGACCTCAGGCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CCA 90 bp | AGTTCTTTACTTACATGGACTGTGGGAAAGGGTCCTGAGCCCCACCCAGCTGGGGATTTCTTTGGCAAATaGGGAAGCCAGAGTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSLLTWTVGKGPEPHPAGDFFGK*GSQSGW Trigger: CCAGCCACTCTGGCTTCCCCATTTGCCAAAGAAATC...CCCAGCTGGGTGGGGCTCAGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CCA 90 bp | GGGAAACTGACTTGCCTGAGGTCACACAGCATGGTAGCAGATAAGGTGGGATATCCAGCAGTCACCTGGTaGCCAGGAGCAGTAGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: GKLTCLRSHSMVADKVGYPAVTW*PGAVGK Trigger: TTTACCTACTGCTCCTGGCCACCAGGTGACTGCTGG...ATATCCCACCTTATCTGCTACCATGCTGTGTGACCTCAGGCAAGTCAGTTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CCA 90 bp | ACTTGCCTGAGGTCACACAGCATGGTAGCAGATAAGGTGGGATATGAACCTGAGCCTTCCAGGCCAAGCTaGGCATGTCCTTCAATGACC | + |
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Preference number: 4 (lower is better) Translates to: TCLRSHSMVADKVGYEPEPSRPS*ACPSMT Trigger: GGTCATTGAAGGACATGCCCAGCTTGGCCTGGAAGG...CTCAGGTTCATATCCCACCTTATCTGCTACCATGCTGTGTGACCTCAGGCAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGGGCTGGTCCTGGCTCAAAGTTTGAGGGTACAGTGTCTGTCTTGGAGCTTCACAGATTTCTTTaGCAAATGGGGAAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SLGAGPGSKFEGTVSVLELHRFL*QMGKPE Trigger: CTCTGGCTTCCCCATTTGCCAAAGAAATCTGTGAAG...CTCCAAGACAGACACTGTACCCTCAAACTTTGAGCCAGGACCAGCCCCCAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CCA 90 bp | GGGAAACTGACTTGCCTGAGGTCACACAGCATGGTAGCAGATAAGGTGGGATATATTCTGGCACAAGGATaGCTCTCTGAGTCTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: GKLTCLRSHSMVADKVGYILAQG*LSESHW Trigger: CCAGTGAGACTCAGAGAGCCATCCTTGTGCCAGAAT...ATATCCCACCTTATCTGCTACCATGCTGTGTGACCTCAGGCAAGTCAGTTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CCA 90 bp | TTTTCTCCTCTATTCATCAGTTCTTTACTTACATGGACTGTGGGAAAGGGTCCTGAGGAGGAAAGGCTCTaGAACCAGGCGGGGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: FSPLFISSLLTWTVGKGPEEERL*NQAGEM Trigger: CATCTCCCCCGCCTGGTTCCAGAGCCTTTCCTCCTC...AGGACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS GCA 90 bp | GGAAAAACCAGCAGACCTACAAGCATGGAGACTGCTGCTGCCGCCTaGACCACCGGTGTCGGACCAAAGCCCGTCCTGGCAAACAACCTT | + |
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Preference number: 5 (lower is better) Translates to: GKTSRPTSMETAAAA*TTGVGPKPVLANNL Trigger: AAGGTTGTTTGCCAGGACGGGCTTTGGTCCGACACCGGTGGTGCAGGCGGCAGCAGCAGTCTCCATGCTTGTAGGTCTGCTGGTTTTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS GCA 90 bp | TGGCACAAGGATGGCTCTCTGAGTCTCACTGGAGAAGGGGACGGCTaGTCTCTGGACTGTGGTCACTTGCCACCTGATGACAAGCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: WHKDGSLSLTGEGDG*SLDCGHLPPDDKQA Trigger: AGCCTGCTTGTCATCAGGTGGCAAGTGACCACAGTCCAGAGAGCAGCCGTCCCCTTCTCCAGTGAGACTCAGAGAGCCATCCTTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS CCA 90 bp | GCCAGCCTCCCAGAAGTGTTGCAGCTGAGACCTTCCAGGCCAAGCTaGGCATGTCCTTCAATGACCCAAAGGTCACACAGCTTTGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: ASLPEVLQLRPSRPS*ACPSMTQRSHSFGS Trigger: GGAACCAAAGCTGTGTGACCTTTGGGTCATTGAAGGACATGCCCAGCTTGGCCTGGAAGGTCTCAGCTGCAACACTTCTGGGAGGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS CCA 90 bp | GGCATGCTCCGCTGTGGTACATGGAGGAGCCTTCACAGATTTCTTTaGCAAATGGGGAAGCCAGAGTGGCTGGAAAAACCAGCAGACCTA | + |
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Preference number: 5 (lower is better) Translates to: GMLRCGTWRSLHRFL*QMGKPEWLEKPADL Trigger: TAGGTCTGCTGGTTTTTCCAGCCACTCTGGCTTCCCCATTTGCCAAAGAAATCTGTGAAGGCTCCTCCATGTACCACAGCGGAGCATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CAA 90 bp | ACTTGCCTGAGGTCACACAGCATGGTAGCAGATAAGGTGGGATATGAACCTGAGAGCCTCCCAGAAGTGTaGCAGCTGAGACCTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TCLRSHSMVADKVGYEPESLPEV*QLRPSR Trigger: CCTGGAAGGTCTCAGCTGCAACACTTCTGGGAGGCT...CTCAGGTTCATATCCCACCTTATCTGCTACCATGCTGTGTGACCTCAGGCAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CAA 90 bp | AGTTTAGAGCAGTGGTCCCTGGGGGCTGGTCCTGGCTCAAAGTTTGAGGGTACACCTTCACAGATTTCTTaGGCAAATGGGGAAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SLEQWSLGAGPGSKFEGTPSQIS*ANGEAR Trigger: TCTGGCTTCCCCATTTGCCAAAGAAATCTGTGAAGG...TGTACCCTCAAACTTTGAGCCAGGACCAGCCCCCAGGGACCACTGCTCTAAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CAA 90 bp | CAGTTTTCTCCTCTATTCATCAGTTCTTTACTTACATGGACTGTGGGAAAGGGTCTGGACTGTGGTCACTaGCCACCTGATGACAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QFSPLFISSLLTWTVGKGLDCGH*PPDDKQ Trigger: CTGCTTGTCATCAGGTGGCAAGTGACCACAGTCCAG...ACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS-3UTR CAA 90 bp | CAGTTTTCTCCTCTATTCATCAGTTCTTTACTTACATGGACTGTGGGAAAGGGTAAAGGTCACACAGCTTaGGTTCCAGCAGTCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: QFSPLFISSLLTWTVGKGKGHTA*VPAVTW Trigger: CCAGGTGACTGCTGGAACCAAAGCTGTGTGACCTTT...ACCCTTTCCCACAGTCCATGTAAGTAAAGAACTGATGAATAGAGGAGAAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS GCA 72 bp | AGCAGACCTACAAGCATGGAGACTGCTGCTGCCGCCTaGACCACCGGTGTCGGACCAAAGCCCGTCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SRPTSMETAAAA*TTGVGPKPVLA Trigger: TGCCAGGACGGGCTTTGGTCCGACACCGGTGGTGCAGGCGGCAGCAGCAGTCTCCATGCTTGTAGGTCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS CCA 72 bp | CCAGAGTGGCTGGAAAAACCAGCAGACCTACAAGCATaGAGACTGCTGCTGCCGCCTGCACCACCGGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: PEWLEKPADLQA*RLLLPPAPPVS Trigger: CGACACCGGTGGTGCAGGCGGCAGCAGCAGTCTCCATGCTTGTAGGTCTGCTGGTTTTTCCAGCCACTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS GCA 72 bp | TGGAAAAACCAGCAGACCTACAAGCATGGAGACTGCTaGTGCCGCCTGCACCACCGGTGTCGGACCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: WKNQQTYKHGDC*CRLHHRCRTKA Trigger: GGCTTTGGTCCGACACCGGTGGTGCAGGCGGCAGCAGCAGTCTCCATGCTTGTAGGTCTGCTGGTTTTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS GCA 72 bp | GGCTGGAAAAACCAGCAGACCTACAAGCATGGAGACTaGTGCTGCCGCCTGCACCACCGGTGTCGGACCAAA | + |
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Preference number: 6 (lower is better) Translates to: GWKNQQTYKHGD*CCRLHHRCRTK Trigger: TTTGGTCCGACACCGGTGGTGCAGGCGGCAGCAGCAGTCTCCATGCTTGTAGGTCTGCTGGTTTTTCCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS GCA 72 bp | GAGAAGGGGACGGCTGCTCTCTGGACTGTGGTCACTTaGCACCTGATGACAAGCAGGCTGGTCAGGACCATG | + |
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Preference number: 6 (lower is better) Translates to: EKGTAALWTVVT*HLMTSRLVRTM Trigger: CATGGTCCTGACCAGCCTGCTTGTCATCAGGTGGCAAGTGACCACAGTCCAGAGAGCAGCCGTCCCCTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS GCA 72 bp | GATGGCTCTCTGAGTCTCACTGGAGAAGGGGACGGCTaGTCTCTGGACTGTGGTCACTTGCCACCTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: DGSLSLTGEGDG*SLDCGHLPPDD Trigger: GTCATCAGGTGGCAAGTGACCACAGTCCAGAGAGCAGCCGTCCCCTTCTCCAGTGAGACTCAGAGAGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS CCA 72 bp | AGCCCCAGCTCAGCCGGCATGCTCCGCTGTGGTACATaGAGGAGCCTTCACAGATTTCTTTGGCAAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: SPSSAGMLRCGT*RSLHRFLWQMG Trigger: CCCCATTTGCCAAAGAAATCTGTGAAGGCTCCTCCATGTACCACAGCGGAGCATGCCGGCTGAGCTGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS CCA 72 bp | CCAGAAGTGTTGCAGCTGAGACCTTCCAGGCCAAGCTaGGCATGTCCTTCAATGACCCAAAGGTCACACAGC | + |
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Preference number: 6 (lower is better) Translates to: PEVLQLRPSRPS*ACPSMTQRSHS Trigger: GCTGTGTGACCTTTGGGTCATTGAAGGACATGCCCAGCTTGGCCTGGAAGGTCTCAGCTGCAACACTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS CAA 90 bp | CGGCATGCTCCGCTGTGGTACATGGAGGAGCCTTCACAGATTTCTTaGGCAAATGGGGAAGCCAGAGTGGCTGGAAAAACCAGCAGACCT | + |
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Preference number: 6 (lower is better) Translates to: RHAPLWYMEEPSQIS*ANGEARVAGKTSRP Trigger: AGGTCTGCTGGTTTTTCCAGCCACTCTGGCTTCCCCATTTGCCAAAGAAATCTGTGAAGGCTCCTCCATGTACCACAGCGGAGCATGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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| CDS CCA 72 bp | CGCTGTGGTACATGGAGGAGCCTTCACAGATTTCTTTaGCAAATGGGGAAGCCAGAGTGGCTGGAAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: RCGTWRSLHRFL*QMGKPEWLEKP Trigger: TGGTTTTTCCAGCCACTCTGGCTTCCCCATTTGCCAAAGAAATCTGTGAAGGCTCCTCCATGTACCACAGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086615.3 |
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