Pregenerated sensors for TMEM208 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014856Ensembl transcript IDs: ENSMUST00000015000.12, ENSMUST00000098453.9, ENSMUST00000109372.3, ENSMUST00000126705.9, ENSMUST00000153146.9
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGTTCCTGGAGAATGTGGCGGCAGCAGAGACGGAGAAGCAGGCTaGTCTGGCCCAAGGCCGAGCGGAGACGCTGGCTGGAGCCACGGT | + |
|
Preference number: 1 (lower is better) Translates to: PVPGECGGSRDGEAG*SGPRPSGDAGWSHG Trigger: ACCGTGGCTCCAGCCAGCGTCTCCGCTCGGCCTTGGGCCAGAGCAGCCTGCTTCTCCGTCTCTGCTGCCGCCACATTCTCCAGGAACCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR CCA 90 bp | CATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTaGTGCAGGGGCTCCACTGTCTGCTGTGAACCAGGGGCCCAGCAC | + |
|
Preference number: 1 (lower is better) Translates to: HLPPLLSALSFLIEL*CRGSTVCCEPGAQH Trigger: GTGCTGGGCCCCTGGTTCACAGCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR GCA 90 bp | GATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAGGCCCTCACTaGTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGTGC | + |
|
Preference number: 1 (lower is better) Translates to: DPIIQAALALKLGPH*SRHGATQHNRANQC Trigger: GCACTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR GCA 90 bp | TGCTCAGGCAGAATCCAGCCGCTAAAGAAACCAACCCTTTTCATCTaGCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGT | + |
|
Preference number: 1 (lower is better) Translates to: CSGRIQPLKKPTLFI*RRSCRRCRFSLSSG Trigger: ACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTCTTTAGCGGCTGGATTCTGCCTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR TCA 90 bp | CTGGCTGGAGCCACGGTAGATGACACTGATGGATCATCAGGTGGGTaGTGCTCAGGCAGAATCCAGCCGCTAAAGAAACCAACCCTTTTC | + |
|
Preference number: 1 (lower is better) Translates to: LAGATVDDTDGSSGG*CSGRIQPLKKPTLF Trigger: GAAAAGGGTTGGTTTCTTTAGCGGCTGGATTCTGCCTGAGCATCACCCACCTGATGATCCATCAGTGTCATCTACCGTGGCTCCAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCCTCACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGTGCCCCAGCGCCCCAGCCCTaGGGCCGCTCACCTGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ALTAPGMGPRSITEPTSAPAPQP*GRSPEL Trigger: CAGCTCAGGTGAGCGGCCCCAGGGCTGGGGCGCTGG...GGCACTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126705.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCTGCTTTGGCCCTTAAACTAGGCCCTCACTGCTCCAGGCATGGGGCCACGCTGGGGCCGCTCACCTaGGCTGGCGATGGGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: QAALALKLGPHCSRHGATLGPLT*AGDGGH Trigger: GTGTCCCCCATCGCCAGCTCAGGTGAGCGGCCCCAG...CGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126705.9 |
||
| 3UTR CAA 90 bp | ACCCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATaGAGCTCTGGTGCAGGGGCTCCACTGTCTGCTGTGAACCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TLFICRRSCRRCRFS*SSGAGAPLSAVNQG Trigger: CCCCTGGTTCACAGCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR CAA 90 bp | AACCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATaGAGCTCTGGTGCAGGGGCTCCACTGTCTGCTGTGAACCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NLFICRRSCRRCRFS*SSGAGAPLSAVNQG Trigger: CCCCTGGTTCACAGCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR GCA 90 bp | TTACCCACAAAAGGTAAAGGGCCCGGCCTGGAGCCAGAAGCCAGAAGGACCAGAAACAGAGCCAACCAGTaGCCAGCAGCCTACAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LPTKGKGPGLEPEARRTRNRANQ*PAAYSL Trigger: GAGGCTGTAGGCTGCTGGGCACTGGTTGGCTCTGTT...TCTGGTCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTACCTTTTGTGGGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAACCAACCCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTAGGGGCTCCACTGTCTaGTGTGAACCAGGGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ETNPFHLPPLLSALSFLIRGSTV*CEPGAQ Trigger: CTGGGCCCCTGGTTCACAGCAGACAGTGGAGCCCCT...AATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTGGGATAAAGGGAGGCTaGCAAGGATGGTATGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PLLSALSFLIELWCRGSTGIKGG*QGWYVG Trigger: GCCAACATACCATCCTTGGCAGCCTCCCTTTATCCC...AGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126705.9 |
||
| 3UTR CAA 90 bp | GCTAAAGAAACCAACCCTTTTCATCTGCCGCCGCTCCTGTCGGCGTaGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AKETNPFHLPPLLSA*SFLIELWCRGSTVC Trigger: GCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTCTTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGAATCCAGCCGCTAAAGAAACCAACCCTTTTCATCTGCCGCCGCTCCTGTCGGTTGTCGTTTCTCATTaGGCTCTGGTGCAGGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QNPAAKETNPFHLPPLLSVVVSH*ALVQGL Trigger: GAGCCCCTGCACCAGAGCTCAATGAGAAACGACAAC...CGACAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTCTTTAGCGGCTGGATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCTCAGTTAAGGATGCTATAACCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTTGTCGTTTCTCATTaGGCTCTGGTGCAGGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ASVKDAITFSSAAAPVGVVVVSH*ALVQGL Trigger: GAGCCCCTGCACCAGAGCTCAATGAGAAACGACAAC...AACGCCGACAGGAGCGGCGGCAGATGAAAAGGTTATAGCATCCTTAACTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAGGCCCTCACTGCAACAGAGCCAACCAGTaGCCAGCAGCCTACAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: FSDPIIQAALALKLGPHCNRANQ*PAAYSL Trigger: GAGGCTGTAGGCTGCTGGGCACTGGTTGGCTCTGTT...GCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTACAGCCTCAGTTAAGGATGCTATAACCTTTTCATCTGCCGCCGCTCCTAAACAGCTGAGCACCTaGACAATGGCTGTCAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: QPTASVKDAITFSSAAAPKQLST*TMAVSR Trigger: CCTACTGACAGCCATTGTTCAGGTGCTCAGCTGTTT...AGGAGCGGCGGCAGATGAAAAGGTTATAGCATCCTTAACTGAGGCTGTAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR CAA 90 bp | CACATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTaGGCCCTTAAACTAGGCCCTCACTGCTCCAGGCATGGGGCCACG | + |
|
Preference number: 2 (lower is better) Translates to: HIRNYLFSDPIIQAA*ALKLGPHCSRHGAT Trigger: CGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTAAGAAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGATGGACTGTCCCACGTaGCTGTGTGTGCTTGCAACT | + |
|
Preference number: 2 (lower is better) Translates to: CKKSVVPVGTTISFPNSKMDCPT*LCVLAT Trigger: AGTTGCAAGCACACACAGGCACGTGGGACAGTCCAT...CTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTTCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| 3UTR-3UTR GCA 90 bp | CACATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAACAGAGCCAACCAGTaGCCAGCAGCCTACAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: HIRNYLFSDPIIQAALALNRANQ*PAAYSL Trigger: GAGGCTGTAGGCTGCTGGGCACTGGTTGGCTCTGTT...AAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAAAGGGGCTCCACTGTCTaGTGTGAACCAGGGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: IRNYLFSDPIIQAALALKRGSTV*CEPGAQ Trigger: CTGGGCCCCTGGTTCACAGCAGACAGTGGAGCCCCT...TTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTAAGAAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGGTTGGTTGTAACTCCTaGGATATGGGTTGGCGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CKKSVVPVGTTISFPNSKVGCNS*DMGWRV Trigger: AACCCGCCAACCCATATCCCAGGAGTTACAACCAAC...CTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTTCTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAAGTAAAGGGCCCGGCCTaGAGCCAGAAGCCAGAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: IRNYLFSDPIIQAALALKVKGPA*SQKPEG Trigger: TCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTAC...TTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR GCA 72 bp | GGAGAATGTGGCGGCAGCAGAGACGGAGAAGCAGGCTaGTCTGGCCCAAGGCCGAGCGGAGACGCTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GECGGSRDGEAG*SGPRPSGDAGW Trigger: CCAGCCAGCGTCTCCGCTCGGCCTTGGGCCAGAGCAGCCTGCTTCTCCGTCTCTGCTGCCGCCACATTCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGACGGAGAAGCAGGCTGCTCTGGCCCAAGGCCGAGCGGAGACGCTGGCTGCCGCTCCTGTCGGCGTaGTCGTTTCTCATTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QRRRSRLLWPKAERRRWLPLLSA*SFLIEL Trigger: GAGCTCAATGAGAAACGACAACGCCGACAGGAGCGG...CAGCCAGCGTCTCCGCTCGGCCTTGGGCCAGAGCAGCCTGCTTCTCCGTCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR GCA 72 bp | ATCCAGGCTGCTTTGGCCCTTAAACTAGGCCCTCACTaGTCCAGGCATGGGGCCACGCAGCATAACAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IQAALALKLGPH*SRHGATQHNRA Trigger: GGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR CAA 90 bp | CCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTCGTTGTCGTTTCTCATaGAGCTCTGGTGCAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PLLSALSFLIELWCRGSTRCRFS*SSGAGA Trigger: AGCCCCTGCACCAGAGCTCAATGAGAAACGACAACG...AGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR GCA 72 bp | TTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTGTCTaGTGTGAACCAGGGGCCCAGCACGTTTACCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: FLIELWCRGSTV*CEPGAQHVYPQ Trigger: TTGTGGGTAAACGTGCTGGGCCCCTGGTTCACAGCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAGTTAAGGATGCTATAACCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTCCGCTCCTGTCGGCGTaGTCGTTTCTCATTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ASVKDAITFSSAAAPVGVPLLSA*SFLIEL Trigger: GAGCTCAATGAGAAACGACAACGCCGACAGGAGCGG...AACGCCGACAGGAGCGGCGGCAGATGAAAAGGTTATAGCATCCTTAACTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTACTTTGACCAAGAACAGCGAGTTGGTTGTAACTCCTGGGATATGGGTTGGCCGTGCCTGTGTGTGCTaGCAACTGAGGGCAGTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CTLTKNSELVVTPGIWVGRACVC*QLRAVP Trigger: GGGCACTGCCCTCAGTTGCAAGCACACACAGGCACG...GCCAACCCATATCCCAGGAGTTACAACCAACTCGCTGTTCTTGGTCAAAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| 3UTR GCA 72 bp | AGAATCCAGCCGCTAAAGAAACCAACCCTTTTCATCTaGCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: RIQPLKKPTLFI*RRSCRRCRFSL Trigger: CAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTCTTTAGCGGCTGGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| 3UTR-3UTR CAA 90 bp | TATAACCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCATAATCCAGGCTGCTTaGGCCCTTAAACTAGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YNLFICRRSCRRCRFSLSIIQAA*ALKLGP Trigger: AGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTAT...GCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR CCA 72 bp | ACCAAGAACAGCGAGTTGGTTGTAACTCCTGGGATATaGGTTGGCGGGTTGGCAGAGGTATACCTAGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TKNSELVVTPGI*VGGLAEVYLVH Trigger: ATGCACTAGGTATACCTCTGCCAACCCGCCAACCCATATCCCAGGAGTTACAACCAACTCGCTGTTCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| 3UTR TCA 72 bp | GAAGCCAGAAGGACCAGATGTAGAGGGAGAAACAGCTaGGCACCTGAACAATGGCTGTCAGTAGGATCACAT | + |
|
Preference number: 3 (lower is better) Translates to: EARRTRCRGRNS*APEQWLSVGSH Trigger: ATGTGATCCTACTGACAGCCATTGTTCAGGTGCTCAGCTGTTTCTCCCTCTACATCTGGTCCTTCTGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | TGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTTGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRRSCRRCRFSLSSGAGACPAPC*GPCHHP Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...AGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | GCCCTCACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGTGCCGTTGTCGTTTCTCATTaGGCTCTGGTGCAGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALTAPGMGPRSITEPTSAVVVSH*ALVQGL Trigger: GAGCCCCTGCACCAGAGCTCAATGAGAAACGACAAC...GGCACTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| 3UTR CAA 72 bp | ATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATaGAGCTCTGGTGCAGGGGCTCCACTGTCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ICRRSCRRCRFS*SSGAGAPLSAV Trigger: CACAGCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | ATGGACTGTCCCACGTGCCTGTGTGTGCTTGCAACTGAGGGCAGTGCCCAGTGGTGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MDCPTCLCVLATEGSAQWCPAPC*GPCHHP Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...CCACTGGGCACTGCCCTCAGTTGCAAGCACACACAGGCACGTGGGACAGTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR GCA 90 bp | CTCACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGTGCCCAGCACTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTAPGMGPRSITEPTSAQHSAMP*SMLRSM Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGTG...CTGGGCACTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR CAA 72 bp | ACCAACCCTTTTCATCTGCCGCCGCTCCTGTCGGCGTaGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNPFHLPPLLSA*SFLIELWCRGS Trigger: GGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| CDS-3UTR GCA 90 bp | TGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTATCCTCAGAGAAGGATaGCCGAGCCATCGAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CRRSCRRCRFSLSSGAGAILREG*PSHRAH Trigger: ATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGAT...AGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR GCA 90 bp | ATGGACTGTCCCACGTGCCTGTGTGTGCTTGCAACTGAGGGCAGTGCCCAGTGGACACCACCGTTGACATaGCTCTCTCTTCAGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: MDCPTCLCVLATEGSAQWTPPLT*LSLQSP Trigger: CGGGCTCTGAAGAGAGAGGCATGTCAACGGTGGTGT...CCACTGGGCACTGCCCTCAGTTGCAAGCACACACAGGCACGTGGGACAGTCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR GCA 90 bp | CCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTCACTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSALSFLIELWCRGSTHSAMP*SMLRSM Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGTG...AGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR CCA 90 bp | GAAACCAACCCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGTAAAGGGCCCGGCCTaGAGCTCTGCCATGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETNPFHLPPLLSALSFLIVKGPA*SSAMPC Trigger: GCAGGGCATGGCAGAGCTCCAGGCCGGGCCCTTTAC...AATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| CDS-3UTR TCA 90 bp | CTAGGCCCTCACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGCATCCAGGCCCAGAATaGGGCAGAGGAATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPHCSRHGATQHNRANQHPGPE*GRGIEE Trigger: TTCTTCTATTCCTCTGCCTCATTCTGGGCCTGGATG...CTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFHLPPLLSALSFLIELWCPAPC*GPCHHP Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...CCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR GCA 90 bp | AGGGGCCCAGCACGTTTACCCACAAAAGGTAAAGGGCCCGGCCTGGAGCCAGAAATCCTCAGAGAAGGATaGCCGAGCCATCGAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGPARLPTKGKGPGLEPEILREG*PSHRAH Trigger: ATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGAT...TTCTGGCTCCAGGCCGGGCCCTTTACCTTTTGTGGGTAAACGTGCTGGGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR GCA 90 bp | AGAAACCAACCCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATCCCGGCCTGGAGCTCTaGCATGCCCTGCTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RNQPFSSAAAPVGVVVSHPGLEL*HALLHV Trigger: AACATGGAGCAGGGCATGGCAGAGCTCCAGGCCGGG...ATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| CDS-3UTR TCA 90 bp | TTGGCCCTTAAACTAGGCCCTCACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGGGAGAAACAGCTaGGCACCTGAACAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LALKLGPHCSRHGATQHNRGRNS*APEQWL Trigger: CAGCCATTGTTCAGGTGCTCAGCTGTTTCTCCCTCT...GTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAGTTTAAGGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCTTAAACTAGGCCCTCACTGCTCCAGGCATGGGGCCACGCAGCATAACATCCTCAGAGAAGGATaGCCGAGCCATCGAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LALKLGPHCSRHGATQHNILREG*PSHRAH Trigger: ATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGAT...GTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAGTTTAAGGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGAGCTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PFHLPPLLSALSFLIELWSSAMP*SMLRSM Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGCT...CCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGATGAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| CDS-3UTR CCA 90 bp | CACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGTGCCCAGCATCTGTTTCTTCCCTCTaGTACCCACTTTTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCSRHGATQHNRANQCPASVSSL*YPLFLW Trigger: CCAAAGGAAAAGTGGGTACCAGAGGGAAGAAACAGA...TGCTGGGCACTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR CCA 90 bp | AGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAGGCCCTCACTGCTCCGTAAAGGGCCCGGCCTaGAGCCAGAAGCCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SDPIIQAALALKLGPHCSVKGPA*SQKPEG Trigger: TCCTTCTGGCTTCTGGCTCCAGGCCGGGCCCTTTAC...GGAGCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR TCA 90 bp | TCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTGTCTCATCCAGGCCCAGAATaGGGCAGAGGAATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCRRCRFSLSSGAGAPLSHPGPE*GRGIEE Trigger: TTCTTCTATTCCTCTGCCTCATTCTGGGCCTGGATG...AGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | AGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAGGCCCTCACTGCTCCTGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SDPIIQAALALKLGPHCSCPAPC*GPCHHP Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...GGAGCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR CCA 90 bp | ATGGACTGTCCCACGTGCCTGTGTGTGCTTGCAACTGAGGGCAGTGCCCAGTGGTCTGTTTCTTCCCTCTaGTACCCACTTTTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDCPTCLCVLATEGSAQWSVSSL*YPLFLW Trigger: CCAAAGGAAAAGTGGGTACCAGAGGGAAGAAACAGA...CCACTGGGCACTGCCCTCAGTTGCAAGCACACACAGGCACGTGGGACAGTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGTCTGTTTCTTCCCTCTaGTACCCACTTTTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ICRRSCRRCRFSLSSGAGSVSSL*YPLFLW Trigger: CCAAAGGAAAAGTGGGTACCAGAGGGAAGAAACAGA...CCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| 3UTR CAA 72 bp | GAGTTGGTTGTAACTCCTGGGATATGGGTTGGCGGGTaGGCAGAGGTATACCTAGTGCATGGACTGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELVVTPGIWVGG*AEVYLVHGLSH Trigger: GTGGGACAGTCCATGCACTAGGTATACCTCTGCCAACCCGCCAACCCATATCCCAGGAGTTACAACCAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR TCA 90 bp | GCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTGTCTGCTGTGAACATCCAGGCCCAGAATaGGGCAGAGGAATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALSFLIELWCRGSTVCCEHPGPE*GRGIEE Trigger: TTCTTCTATTCCTCTGCCTCATTCTGGGCCTGGATG...TTCACAGCAGACAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCAGTTAAGGATGCTATAACCTTTTCATCTGCCGCCGCTCCTGTCGGCGTTCATCCAGGCCCAGAATaGGGCAGAGGAATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASVKDAITFSSAAAPVGVHPGPE*GRGIEE Trigger: TTCTTCTATTCCTCTGCCTCATTCTGGGCCTGGATG...AACGCCGACAGGAGCGGCGGCAGATGAAAAGGTTATAGCATCCTTAACTGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR CCA 90 bp | CTAAGGCCTGCCCCTTCCACACTGTTTAGTTGTGAGTCTTGGGCTGTGTGGGCCTCTGTTTCTTCCCTCTaGTACCCACTTTTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRPAPSTLFSCESWAVWASVSSL*YPLFLW Trigger: CCAAAGGAAAAGTGGGTACCAGAGGGAAGAAACAGA...GGCCCACACAGCCCAAGACTCACAACTAAACAGTGTGGAAGGGGCAGGCCTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126705.9 |
||
| CDS-3UTR TCA 90 bp | CGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTCCACTGTCCGAAGGTAAAACTTaGGAGTTTCTTTGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSCRRCRFSLSSGAGAPLSEGKT*EFLCSL Trigger: AAGAGAACAAAGAAACTCTCAAGTTTTACCTTCGGA...CAGTGGAGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR GCA 90 bp | TGTACTTTGACCAAGAACAGCGAGTTGGTTGTAACTCCTGGGATATGGGTTGGCACCTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CTLTKNSELVVTPGIWVGTSAMP*SMLRSM Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGGT...GCCAACCCATATCCCAGGAGTTACAACCAACTCGCTGTTCTTGGTCAAAGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR CCA 90 bp | TGTAAGAAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGTCAGAGCCCGGTTCCTaGAGAATGTGGCGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKKSVVPVGTTISFPNSKSEPGS*RMWRQQ Trigger: CTGCTGCCGCCACATTCTCCAGGAACCGGGCTCTGA...CTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTTCTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR GCA 90 bp | AGCCACATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCAGGGGCTCCACTGTCTaGTGTGAACCAGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHIRNYLFSDPIIQAALARGSTV*CEPGAQ Trigger: CTGGGCCCCTGGTTCACAGCAGACAGTGGAGCCCCT...GGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAATGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGGATCTTGGTTCCTGGAGAATGTaGCGGCAGCAGAGACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVVPVGTTISFPNSKDLGSWRM*RQQRRR Trigger: TCTCCGTCTCTGCTGCCGCCACATTCTCCAGGAACC...AAGATCCTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR TCA 90 bp | TGTACTTTGACCAAGAACAGCGAGTTGGTTGTAACTCCTGGGATATGGGTTGGCCATCCAGGCCCAGAATaGGGCAGAGGAATAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTLTKNSELVVTPGIWVGHPGPE*GRGIEE Trigger: TTCTTCTATTCCTCTGCCTCATTCTGGGCCTGGATG...GCCAACCCATATCCCAGGAGTTACAACCAACTCGCTGTTCTTGGTCAAAGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR TCA 90 bp | AAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGGATCTTGGATCATCAGGTGGGTaGTGCTCAGGCAGAATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVVPVGTTISFPNSKDLGSSGG*CSGRIQ Trigger: CTGGATTCTGCCTGAGCATCACCCACCTGATGATCC...AAGATCCTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR TCA 90 bp | AGGCAGAATCCAGCCGCTAAAGAAACCAACCCTTTTCATCTGCCGCCGCTCCTGTCCGAAGGTAAAACTTaGGAGTTTCTTTGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQNPAAKETNPFHLPPLLSEGKT*EFLCSL Trigger: AAGAGAACAAAGAAACTCTCAAGTTTTACCTTCGGA...CAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTCTTTAGCGGCTGGATTCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| CDS-3UTR GCA 90 bp | TGTAAGAAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGATCCTCAGAGAAGGATaGCCGAGCCATCGAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CKKSVVPVGTTISFPNSKILREG*PSHRAH Trigger: ATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGAT...CTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTTCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR CCA 90 bp | TTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAGGCCCTCACTGCTCTGTTTCTTCCCTCTaGTACCCACTTTTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSDPIIQAALALKLGPHCSVSSL*YPLFLW Trigger: CCAAAGGAAAAGTGGGTACCAGAGGGAAGAAACAGA...GCAGTGAGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | CGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTATGCCCTGCTCCATGTTaGGGTCCATGCCACCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNYLFSDPIIQAALALKLCPAPC*GPCHHP Trigger: TGGATGGTGGCATGGACCTCAACATGGAGCAGGGCA...TAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR GCA 90 bp | TATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAGGCCCTATCCTCAGAGAAGGATaGCCGAGCCATCGAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLFSDPIIQAALALKLGPILREG*PSHRAH Trigger: ATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGAT...AGGGCCTAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGGATCTTAAAGAAACCAACCTCTaGCATGCCCTGCTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVVPVGTTISFPNSKDLKETNL*HALLHV Trigger: AACATGGAGCAGGGCATGGCAGAGGTTGGTTTCTTT...AAGATCCTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR GCA 90 bp | CACATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTATCACATCCTTAAGGTaGTCTGCCATGCCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HIRNYLFSDPIIQAALALITSLR*SAMPCS Trigger: GGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGAT...AAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR GCA 90 bp | ATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAATGCTCTGCCATGCCCTaGTCCATGTTGAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IRNYLFSDPIIQAALALKCSAMP*SMLRSM Trigger: CATGGACCTCAACATGGAGCAGGGCATGGCAGAGCA...TTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR TCA 90 bp | CGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAAAACAGCTGAGCACCTaGACAATGGCTGTCAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNYLFSDPIIQAALALKLKQLST*TMAVSR Trigger: CCTACTGACAGCCATTGTTCAGGTGCTCAGCTGTTT...TAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR GCA 90 bp | CGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAACTAATCCTTAAGGTGCTCTaGCATGCCCTGCTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RNYLFSDPIIQAALALKLILKVL*HALLHV Trigger: AACATGGAGCAGGGCATGGCAGAGCACCTTAAGGAT...TAGTTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR GCA 90 bp | ATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAATATAACCTTTTCATCTaGCGCCGCTCCTGTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: IRNYLFSDPIIQAALALKYNLFI*RRSCRR Trigger: ACGCCGACAGGAGCGGCGGCAGATGAAAAGGTTATA...TTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR TCA 90 bp | TGTAAGAAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGTCCGAAGGTAAAACTTaGGAGTTTCTTTGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CKKSVVPVGTTISFPNSKSEGKT*EFLCSL Trigger: AAGAGAACAAAGAAACTCTCAAGTTTTACCTTCGGA...CTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTTCTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR TCA 90 bp | CACATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTTCCGAAGGTAAAACTTaGGAGTTTCTTTGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIRNYLFSDPIIQAALALSEGKT*EFLCSL Trigger: AAGAGAACAAAGAAACTCTCAAGTTTTACCTTCGGA...AAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR TCA 90 bp | ATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCTTAAATCCGAAGGTAAAACTTaGGAGTTTCTTTGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IRNYLFSDPIIQAALALKSEGKT*EFLCSL Trigger: AAGAGAACAAAGAAACTCTCAAGTTTTACCTTCGGA...TTTAAGGGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS GCA 90 bp | GTGTGCCACCCTGGGCTGGACTTGGGTCAGACACCACCGTTGACATaGCTCTCTCTTCAGAGCCCGGTTCCTGGAGAATGTGGCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VCHPGLDLGQTPPLT*LSLQSPVPGECGGS Trigger: GCTGCCGCCACATTCTCCAGGAACCGGGCTCTGAAGAGAGAGGCATGTCAACGGTGGTGTCTGACCCAAGTCCAGCCCAGGGTGGCACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS TCA 90 bp | GGCATGTGTGCCACCCTGGGCTGGACTTGGGTCAGACACCACCGTTaGCATGCCTCTCTCTTCAGAGCCCGGTTCCTGGAGAATGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GMCATLGWTWVRHHR*HASLFRARFLENVA Trigger: CGCCACATTCTCCAGGAACCGGGCTCTGAAGAGAGAGGCATGTCAACGGTGGTGTCTGACCCAAGTCCAGCCCAGGGTGGCACACATGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR CAA 90 bp | CACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGTGCCCAGCAATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HCSRHGATQHNRANQCPAMPCSM*RSMPPS Trigger: GGATGGTGGCATGGACCTCAACATGGAGCAGGGCAT...TGCTGGGCACTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR CAA 90 bp | TGCCGCCGCTCCTGTCGGCGTTGTCGTTTCTCATTGAGCTCTGGTGCAGGGGCTATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CRRSCRRCRFSLSSGAGAMPCSM*RSMPPS Trigger: GGATGGTGGCATGGACCTCAACATGGAGCAGGGCAT...AGCCCCTGCACCAGAGCTCAATGAGAAACGACAACGCCGACAGGAGCGGCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR CAA 90 bp | GCCCTCACTGCTCCAGGCATGGGGCCACGCAGCATAACAGAGCCAACCAGTGCCCGTTGTCGTTTCTCATaGAGCTCTGGTGCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALTAPGMGPRSITEPTSARCRFS*SSGAGA Trigger: AGCCCCTGCACCAGAGCTCAATGAGAAACGACAACG...GGCACTGGTTGGCTCTGTTATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS-3UTR CAA 90 bp | GCTTTGGCCCTTAAACTAGGCCCTCACTGCTCCAGGCATGGGGCCACGCAGCATATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALALKLGPHCSRHGATQHMPCSM*RSMPPS Trigger: GGATGGTGGCATGGACCTCAACATGGAGCAGGGCAT...ATGCTGCGTGGCCCCATGCCTGGAGCAGTGAGGGCCTAGTTTAAGGGCCAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015000.12 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS GCA 90 bp | GAGGTCCATGCCACCATCCATCAAGGACCCATCCTCAGAGAAGGATaGCCGAGCCATCGAGCTCATAGAGTGGTAGCTGGCCCCGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: EVHATIHQGPILREG*PSHRAHRVVAGPVH Trigger: GTGTACGGGGCCAGCTACCACTCTATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGATGGGTCCTTGATGGATGGTGGCATGGACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000015000.12 ENSMUST00000098453.9 ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAATCCAGCCGCTAAAGAAACCAACCCTTTTCATCTGCCGCCGCTCCTGATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RQNPAAKETNPFHLPPLLMPCSM*RSMPPS Trigger: GGATGGTGGCATGGACCTCAACATGGAGCAGGGCAT...CAGGAGCGGCGGCAGATGAAAAGGGTTGGTTTCTTTAGCGGCTGGATTCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| CDS TCA 90 bp | CTGGCTGGAGCCACGGTAGATGACACTGATGGATCATCAGGTGGGTaGTGCTCAGGCAGAATCCAGCCGCTAAAGAAACCAACCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAGATVDDTDGSSGG*CSGRIQPLKKPTSA Trigger: GGCAGAGGTTGGTTTCTTTAGCGGCTGGATTCTGCCTGAGCATCACCCACCTGATGATCCATCAGTGTCATCTACCGTGGCTCCAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS GCA 90 bp | TCAGGCAGAATCCAGCCGCTAAAGAAACCAACCTCTGCCATGCCCTaGTCCATGTTGAGGTCCATGCCACCATCCATCAAGGACCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRIQPLKKPTSAMP*SMLRSMPPSIKDPS Trigger: GGATGGGTCCTTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGGTTGGTTTCTTTAGCGGCTGGATTCTGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS GCA 90 bp | TGGGTGATGCTCAGGCAGAATCCAGCCGCTAAAGAAACCAACCTCTaGCATGCCCTGCTCCATGTTGAGGTCCATGCCACCATCCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: WVMLRQNPAAKETNL*HALLHVEVHATIHQ Trigger: TTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGGTTGGTTTCTTTAGCGGCTGGATTCTGCCTGAGCATCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR CAA 90 bp | TGTACTTTGACCAAGAACAGCGAGTTGGTTGTAACTCCTGGGATATGGGTTGGCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CTLTKNSELVVTPGIWVGMPCSM*RSMPPS Trigger: GGATGGTGGCATGGACCTCAACATGGAGCAGGGCAT...GCCAACCCATATCCCAGGAGTTACAACCAACTCGCTGTTCTTGGTCAAAGTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCTGTTGTGCCTGTTGGGACAACTATCTCCTTCCCTAACTCTAAGGATCTTCACCCTGGGCTGGACTaGGGTCAGACACCACCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KSVVPVGTTISFPNSKDLHPGLD*GQTPPL Trigger: CAACGGTGGTGTCTGACCCAAGTCCAGCCCAGGGTG...AAGATCCTTAGAGTTAGGGAAGGAGATAGTTGTCCCAACAGGCACAACAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS-3UTR CAA 90 bp | AGCCACATTCGAAACTATTTATTTAGTGATCCTATAATCCAGGCTGCTTTGGCCCCGCTCCTGTCGGCGTaGTCGTTTCTCATTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHIRNYLFSDPIIQAALAPLLSA*SFLIEL Trigger: GAGCTCAATGAGAAACGACAACGCCGACAGGAGCGG...GGCCAAAGCAGCCTGGATTATAGGATCACTAAATAAATAGTTTCGAATGTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS TCA 72 bp | GCCACCCTGGGCTGGACTTGGGTCAGACACCACCGTTaGCATGCCTCTCTCTTCAGAGCCCGGTTCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATLGWTWVRHHR*HASLFRARFLE Trigger: CTCCAGGAACCGGGCTCTGAAGAGAGAGGCATGTCAACGGTGGTGTCTGACCCAAGTCCAGCCCAGGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS CAA 72 bp | TGCCACCCTGGGCTGGACTTGGGTCAGACACCACCGTaGACATGCCTCTCTCTTCAGAGCCCGGTTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CHPGLDLGQTPP*TCLSLQSPVPG Trigger: TCCAGGAACCGGGCTCTGAAGAGAGAGGCATGTCAACGGTGGTGTCTGACCCAAGTCCAGCCCAGGGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS CAA 90 bp | AGGCATGTGTGCCACCCTGGGCTGGACTTGGGTCAGACACCACCGTaGACATGCCTCTCTCTTCAGAGCCCGGTTCCTGGAGAATGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RHVCHPGLDLGQTPP*TCLSLQSPVPGECG Trigger: GCCACATTCTCCAGGAACCGGGCTCTGAAGAGAGAGGCATGTCAACGGTGGTGTCTGACCCAAGTCCAGCCCAGGGTGGCACACATGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS CCA 72 bp | ACCGTTGACATGCCTCTCTCTTCAGAGCCCGGTTCCTaGAGAATGTGGCGGCAGCAGAGACGGAGAAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TVDMPLSSEPGS*RMWRQQRRRSR Trigger: CCTGCTTCTCCGTCTCTGCTGCCGCCACATTCTCCAGGAACCGGGCTCTGAAGAGAGAGGCATGTCAACGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS CAA 90 bp | AAGGTAAAGGGCCCGGCCTGGAGCTCTGCCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCCATCAAGGACCCATCCTCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KVKGPAWSSAMPCSM*RSMPPSIKDPSSEK Trigger: CTTCTCTGAGGATGGGTCCTTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGCTCCAGGCCGGGCCCTTTACCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109372.3 |
||
| CDS GCA 72 bp | GCCACCATCCATCAAGGACCCATCCTCAGAGAAGGATaGCCGAGCCATCGAGCTCATAGAGTGGTAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATIHQGPILREG*PSHRAHRVVAG Trigger: GCCAGCTACCACTCTATGAGCTCGATGGCTCGGGCATCCTTCTCTGAGGATGGGTCCTTGATGGATGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015000.12 ENSMUST00000098453.9 ENSMUST00000109372.3 ENSMUST00000126705.9 ENSMUST00000153146.9 |
||
| CDS GCA 72 bp | CCTGGGCTGGACTTGGGTCAGACACCACCGTTGACATaGCTCTCTCTTCAGAGCCCGGTTCCTGGAGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PGLDLGQTPPLT*LSLQSPVPGEC Trigger: ACATTCTCCAGGAACCGGGCTCTGAAGAGAGAGGCATGTCAACGGTGGTGTCTGACCCAAGTCCAGCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS GCA 72 bp | CTCAGGCAGAATCCAGCCGCTAAAGAAACCAACCTCTaGCATGCCCTGCTCCATGTTGAGGTCCATGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: LRQNPAAKETNL*HALLHVEVHAT Trigger: GGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGGTTGGTTTCTTTAGCGGCTGGATTCTGCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS CAA 72 bp | ACATCCTTAAGGTGCTCTGCCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCCATCAAGGACCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TSLRCSAMPCSM*RSMPPSIKDPS Trigger: GGATGGGTCCTTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGCACCTTAAGGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||
| CDS CAA 90 bp | ATCCAGCCGCTAAAGAAACCAACCTCTGCCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCCATCAAGGACCCATCCTCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IQPLKKPTSAMPCSM*RSMPPSIKDPSSEK Trigger: CTTCTCTGAGGATGGGTCCTTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGGTTGGTTTCTTTAGCGGCTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS CAA 72 bp | CTAAAGAAACCAACCTCTGCCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCCATCAAGGACCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LKKPTSAMPCSM*RSMPPSIKDPS Trigger: GGATGGGTCCTTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGGTTGGTTTCTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098453.9 |
||
| CDS CAA 90 bp | AGTAGGATCACATCCTTAAGGTGCTCTGCCATGCCCTGCTCCATGTaGAGGTCCATGCCACCATCCATCAAGGACCCATCCTCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRITSLRCSAMPCSM*RSMPPSIKDPSSEK Trigger: CTTCTCTGAGGATGGGTCCTTGATGGATGGTGGCATGGACCTCAACATGGAGCAGGGCATGGCAGAGCACCTTAAGGATGTGATCCTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015000.12 |
||