Pregenerated sensors for TMEM207 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091972Ensembl transcript IDs: ENSMUST00000165687.3
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACATCACTAGGGCCAGTGTTTCTTCCTGCCATCCCCTCCACTCTTTaGTCTGCTTGTTTCTACAGCAGGTCTCCAGGAATTTCAACTAAG | + |
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Preference number: 2 (lower is better) Translates to: TSLGPVFLPAIPSTL*SACFYSRSPGISTK Trigger: CTTAGTTGAAATTCCTGGAGACCTGCTGTAGAAACAAGCAGACAAAAGAGTGGAGGGGATGGCAGGAAGAAACACTGGCCCTAGTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGTCAAACTAATGCAAGTGTTTGCACCTATTTCTGCCTCCTTAAGAACTAAACTCCACTCTTTTGTCTaGTTGTTTCTACAGCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: EVKLMQVFAPISASLRTKLHSFV*LFLQQV Trigger: GACCTGCTGTAGAAACAAGCAGACAAAAGAGTGGAG...TTTAGTTCTTAAGGAGGCAGAAATAGGTGCAAACACTTGCATTAGTTTGACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| CDS-3UTR TCA 90 bp | CTCACTAAAACATCACTAGGGCCAGTGTTTCTTCCTGCCATCCCCTCCACTCTTTGCGTCTGGGAGGATTaGTTCCGCACCTTTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LTKTSLGPVFLPAIPSTLCVWED*FRTFSA Trigger: GGCTGAAAAGGTGCGGAATCAATCCTCCCAGACGCA...AAGAGTGGAGGGGATGGCAGGAAGAAACACTGGCCCTAGTGATGTTTTAGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| 3UTR CAA 72 bp | GGGCCAGTGTTTCTTCCTGCCATCCCCTCCACTCTTTaGTCTGCTTGTTTCTACAGCAGGTCTCCAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: GPVFLPAIPSTL*SACFYSRSPGI Trigger: AATTCCTGGAGACCTGCTGTAGAAACAAGCAGACAAAAGAGTGGAGGGGATGGCAGGAAGAAACACTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| CDS-3UTR GCA 90 bp | GCCAAAGAATTGTGCCTAAAATTCACTGTATATACAAATATAGCTGCTGCATCTACTTCCAGCCATTTCTaGACCATAAACAGGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: AKELCLKFTVYTNIAAASTSSHF*TINRIQ Trigger: TTGGATCCTGTTTATGGTGCAGAAATGGCTGGAAGT...AGATGCAGCAGCTATATTTGTATATACAGTGAATTTTAGGCACAATTCTTTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| CDS-3UTR CAA 90 bp | CTCACTAAAACATCACTAGGGCCAGTGTTTCTTCCTGCCATCCCCTCCACTCTTGCACAGTTCAGTGTTTaGAGTAGGATGGCAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: LTKTSLGPVFLPAIPSTLAQFSV*SRMADS Trigger: GGAATCTGCCATCCTACTCAAAACACTGAACTGTGC...AAGAGTGGAGGGGATGGCAGGAAGAAACACTGGCCCTAGTGATGTTTTAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| CDS TCA 90 bp | ATGGTGCGTCTGGGAGGATTGATTCCGCACCTTTTCAGCCAGCACTaGAGACAGAAAAGCACTACTCCACAAAGGAGAACCACTAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: MVRLGGLIPHLFSQH*RQKSTTPQRRTTKK Trigger: TTTCTTAGTGGTTCTCCTTTGTGGAGTAGTGCTTTTCTGTCTTCAGTGCTGGCTGAAAAGGTGCGGAATCAATCCTCCCAGACGCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| CDS TCA 72 bp | CAACAGCAAAAACAGCCATGGTGCGTCTGGGAGGATTaGTTCCGCACCTTTTCAGCCAGCACTGAAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: QQQKQPWCVWED*FRTFSASTEDR Trigger: TCTGTCTTCAGTGCTGGCTGAAAAGGTGCGGAATCAATCCTCCCAGACGCACCATGGCTGTTTTTGCTGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| CDS TCA 72 bp | GCACCAAAGCAGGGAGCAGAGCACAGTTCAGTGTTTTaGGTAGGATGGCAGATTCCAGATGTTGGACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: APKQGAEHSSVF*VGWQIPDVGLP Trigger: TGGAAGTCCAACATCTGGAATCTGCCATCCTACTCAAAACACTGAACTGTGCTCTGCTCCCTGCTTTGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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| CDS CAA 72 bp | AGCACCAAAGCAGGGAGCAGAGCACAGTTCAGTGTTTaGAGTAGGATGGCAGATTCCAGATGTTGGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: STKAGSRAQFSV*SRMADSRCWTS Trigger: GGAAGTCCAACATCTGGAATCTGCCATCCTACTCAAAACACTGAACTGTGCTCTGCTCCCTGCTTTGGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165687.3 |
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