Pregenerated sensors for TMEM205 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040883Ensembl transcript IDs: ENSMUST00000046831.11, ENSMUST00000213698.2, ENSMUST00000214569.2, ENSMUST00000238930.2
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTGTCCCGCAGCTGGCGGTAGGGATCAGGGCCCTGGAAGTTGCCTaGCACCTCTGTCCCCAGGCCCCGCTCTTTCTCTATGCTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LVPQLAVGIRALEVA*HLCPQAPLFLYALQ Trigger: CTGCAGAGCATAGAGAAAGAGCGGGGCCTGGGGACAGAGGTGCCAGGCAACTTCCAGGGCCCTGATCCCTACCGCCAGCTGCGGGACAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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| CDS CCA 90 bp | ACAGGCCATGGTAGTGGTAGAACTTCCGGCGTAGAGCACTGTACTTaGGGTCCTTGTCCCGCAGCTGGCGGTAGGGATCAGGGCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: TGHGSGRTSGVEHCT*GPCPAAGGRDQGPG Trigger: TCCAGGGCCCTGATCCCTACCGCCAGCTGCGGGACAAGGACCCCAAGTACAGTGCTCTACGCCGGAAGTTCTACCACTACCATGGCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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| CDS GCA 90 bp | CAAGGCCCACAAGGCAGAGCCCATTGCTCAGCAGGCACCCCAGGTTaGAGAGGGAAGACAGGCCATGGTAGTGGTAGAACTTCCGGCGTA | + |
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Preference number: 5 (lower is better) Translates to: QGPQGRAHCSAGTPG*RGKTGHGSGRTSGV Trigger: TACGCCGGAAGTTCTACCACTACCATGGCCTGTCTTCCCTCTGCAACCTGGGGTGCCTGCTGAGCAATGGGCTCTGCCTTGTGGGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000238930.2 |
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| CDS CCA 90 bp | GCAGAGGTTGATGAAGGCACAGCCCAAGGAGACGTGAAAATAGACTaGGAAGACCTTGCTCTGCACCAGTCCAAATGTGTGCCGCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: AEVDEGTAQGDVKID*EDLALHQSKCVPRE Trigger: CTCCCGCGGCACACATTTGGACTGGTGCAGAGCAAGGTCTTCCCAGTCTATTTTCACGTCTCCTTGGGCTGTGCCTTCATCAACCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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| CDS GCA 72 bp | ACCTCTGTCCCCAGGCCCCGCTCTTTCTCTATGCTCTaGAGGGCCCGCATGACAGCCGTGGTGCGAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: TSVPRPRSFSML*RARMTAVVRAS Trigger: TGAGGCTCGCACCACGGCTGTCATGCGGGCCCTGCAGAGCATAGAGAAAGAGCGGGGCCTGGGGACAGAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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| CDS CCA 72 bp | GGTAGTGGTAGAACTTCCGGCGTAGAGCACTGTACTTaGGGTCCTTGTCCCGCAGCTGGCGGTAGGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: GSGRTSGVEHCT*GPCPAAGGRDQ Trigger: CTGATCCCTACCGCCAGCTGCGGGACAAGGACCCCAAGTACAGTGCTCTACGCCGGAAGTTCTACCACTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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| CDS GCA 72 bp | CAAGGCAGAGCCCATTGCTCAGCAGGCACCCCAGGTTaGAGAGGGAAGACAGGCCATGGTAGTGGTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: QGRAHCSAGTPG*RGKTGHGSGRT Trigger: AGTTCTACCACTACCATGGCCTGTCTTCCCTCTGCAACCTGGGGTGCCTGCTGAGCAATGGGCTCTGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000238930.2 |
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| CDS GCA 72 bp | AGCCCAAGGAGACGTGAAAATAGACTGGGAAGACCTTaGTCTGCACCAGTCCAAATGTGTGCCGCGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SPRRRENRLGRP*SAPVQMCAAGG Trigger: GCCTCCCGCGGCACACATTTGGACTGGTGCAGAGCAAGGTCTTCCCAGTCTATTTTCACGTCTCCTTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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| CDS CCA 72 bp | GACTTCCCACAGTGTGAGGTGAATCCAGGCTCGCTGTaGTGCCAAGATGCAGAGGTTGATGAAGGCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: DFPQCEVNPGSL*CQDAEVDEGTA Trigger: GGCTGTGCCTTCATCAACCTCTGCATCTTGGCACCACAGCGAGCCTGGATTCACCTCACACTGTGGGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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| CDS CCA 72 bp | GATGAAGGCACAGCCCAAGGAGACGTGAAAATAGACTaGGAAGACCTTGCTCTGCACCAGTCCAAATGTGTG | + |
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Preference number: 6 (lower is better) Translates to: DEGTAQGDVKID*EDLALHQSKCV Trigger: CACACATTTGGACTGGTGCAGAGCAAGGTCTTCCCAGTCTATTTTCACGTCTCCTTGGGCTGTGCCTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046831.11 ENSMUST00000213698.2 ENSMUST00000214569.2 ENSMUST00000238930.2 |
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