Pregenerated sensors for TMEM204 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024168Ensembl transcript IDs: ENSMUST00000024984.7, ENSMUST00000153745.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCATACTGCCTCATTCCCTGTCTCGGCTTCTAGTCTCCACCTTTaGAACTCACATGACGTGAAGCCATGCTCTGCCTGGCCAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: AHTASFPVSASSLHL*NSHDVKPCSAWPRK Trigger: CTTCCTTGGCCAGGCAGAGCATGGCTTCACGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCGAGACAGGGAATGAGGCAGTATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| 3UTR TCA 90 bp | ATGAAACCGGTACCACCTGGTAAGGTCTGGTTGTCAGACCCTTCATaGAAAGATTCCTGGATGTCCTGCTTCGTAAAAGTCACTGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: MKPVPPGKVWLSDPS*KDSWMSCFVKVTGD Trigger: ATCCCCAGTGACTTTTACGAAGCAGGACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACCTTACCAGGTGGTACCGGTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| 3UTR TCA 90 bp | CAAACAATCAGGAGTAAAACGTACGCTCTTAACCTGACTCTGGCATaGAACCGGTACCACCTGGTAAGGTCTGGTTGTCAGACCCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: QTIRSKTYALNLTLA*NRYHLVRSGCQTLH Trigger: ATGAAGGGTCTGACAACCAGACCTTACCAGGTGGTACCGGTTTCATGCCAGAGTCAGGTTAAGAGCGTACGTTTTACTCCTGATTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGTAAGGTCTGGTTGTCAGACCCTTCATGAAAAGATTCCTGGATGTCCTGCTCTCACCCCACACCTCTaGACAAGCAGGGCCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LVRSGCQTLHEKIPGCPALTPHL*TSRAWS Trigger: GCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAG...AGCAGGACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACCTTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGGTTGTCAGACCCTTCATGAAAAGATTCCTGGATGTCCTGCTTCGTAAAAACCCCAAATGGAGGTaGAGAGCAAGGTGCCCATAC | + |
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Preference number: 2 (lower is better) Translates to: GLVVRPFMKRFLDVLLRKNPKWR*RARCPY Trigger: GTATGGGCACCTTGCTCTCCACCTCCATTTGGGGTT...TTTACGAAGCAGGACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| 3UTR CCA 72 bp | CCCGGACTCACCCCACACCTCTGCACAAGCAGGGCCTaGAGCAGTCTACCGATTTCTAGACTACAGCGTTAT | + |
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Preference number: 3 (lower is better) Translates to: PGLTPHLCTSRA*SSLPISRLQRY Trigger: ATAACGCTGTAGTCTAGAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| 3UTR TCA 72 bp | CGGCTTCTAGTCTCCACCTTTGAAACTCACATGACGTaGAGCCATGCTCTGCCTGGCCAAGGAAGATCGTGT | + |
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Preference number: 3 (lower is better) Translates to: RLLVSTFETHMT*SHALPGQGRSC Trigger: ACACGATCTTCCTTGGCCAGGCAGAGCATGGCTTCACGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| 3UTR TCA 72 bp | AGGAGTAAAACGTACGCTCTTAACCTGACTCTGGCATaGAACCGGTACCACCTGGTAAGGTCTGGTTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: RSKTYALNLTLA*NRYHLVRSGCQ Trigger: CTGACAACCAGACCTTACCAGGTGGTACCGGTTTCATGCCAGAGTCAGGTTAAGAGCGTACGTTTTACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| 3UTR TCA 72 bp | GTACCACCTGGTAAGGTCTGGTTGTCAGACCCTTCATaGAAAGATTCCTGGATGTCCTGCTTCGTAAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: VPPGKVWLSDPS*KDSWMSCFVKV Trigger: GACTTTTACGAAGCAGGACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACCTTACCAGGTGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR TCA 90 bp | AGCCCGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGAGCACTGGGACTCTGGTaGCATCAGGGGCAGGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SPDSPHTSAQAGPGAVYRALGLW*HQGQAR Trigger: ACGGGCCTGCCCCTGATGTCACCAGAGTCCCAGTGC...TCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | CGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGATTTCGACGATCACCCGGGGTaGCATGCAGTCCTCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: RTHPTPLHKQGLEQSTDFDDHPG*HAVLPP Trigger: CGGAGGGAGGACTGCATGGCACCCCGGGTGATCGTC...GAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | AGCCCGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGAGCTTGCCAGCTGGAATaGAGCAGCCATTGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SPDSPHTSAQAGPGAVYRACQLE*SSHCLL Trigger: GAGGAGGCAATGGCTGCTGCATTCCAGCTGGCAAGC...TCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | CGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGATTTCTCACCCGGGGTGCCATaGAGTCCTCCCTCCGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: RTHPTPLHKQGLEQSTDFSPGVP*SPPSGE Trigger: TTCACCGGAGGGAGGACTGCATGGCACCCCGGGTGA...GAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR CCA 90 bp | AGCCCGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGACAACAAGTGCAGCTGTaGCCACCAGGTTGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SPDSPHTSAQAGPGAVYRQQVQL*PPGCRH Trigger: GTGCCTGCAACCTGGTGGCCACAGCTGCACTTGTTG...TCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR CCA 90 bp | CGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGATTTCTTGCAGCCGCCAGGGTaGCCAGAAGGCAGGCACCAA | + |
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Preference number: 4 (lower is better) Translates to: RTHPTPLHKQGLEQSTDFLQPPG*PEGRHQ Trigger: TTGGTGCCTGCCTTCTGGCCACCCTGGCGGCTGCAA...GAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR CCA 90 bp | CGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGATTTCGCCTCCTCCCAGCACTaGGACTCTGGTGACATCAGG | + |
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Preference number: 4 (lower is better) Translates to: RTHPTPLHKQGLEQSTDFASSQH*DSGDIR Trigger: CCTGATGTCACCAGAGTCCCAGTGCTGGGAGGAGGC...GAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR CCA 90 bp | GGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGATTTCTTTGCAGCCGCCAGGGTaGCCAGAAGGCAGGCACCAA | + |
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Preference number: 4 (lower is better) Translates to: GLTPHLCTSRAWSSLPISLQPPG*PEGRHQ Trigger: TTGGTGCCTGCCTTCTGGCCACCCTGGCGGCTGCAA...AGAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR TCA 90 bp | ATAGGTAGCCCGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCGAAGAATGTTCCAGATaGGCATTGCAGCCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: IGSPDSPHTSAQAGPGAVEECSR*ALQPPG Trigger: CCCTGGCGGCTGCAATGCTCATCTGGAACATTCTTC...GACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCGGGCTACCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | ATAGGTAGCCCGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCCTGACCCACAACAAGTaGAGCTGTGGCCACCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: IGSPDSPHTSAQAGPGAVLTHNK*SCGHQV Trigger: AACCTGGTGGCCACAGCTGCACTTGTTGTGGGTCAG...GACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCGGGCTACCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR CCA 90 bp | CCCCAAATGGAGGTGGAGAGCAAGGTGCCCATACTGCCTCATTCCCTGTCTCGGCCACCAGCACAGCGGTaGCCACAAGCTTCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PQMEVESKVPILPHSLSRPPAQR*PQASGE Trigger: CTCTCCAGAAGCTTGTGGCCACCGCTGTGCTGGTGG...CCGAGACAGGGAATGAGGCAGTATGGGCACCTTGCTCTCCACCTCCATTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CCA 90 bp | CCCCAAATGGAGGTGGAGAGCAAGGTGCCCATACTGCCTCATTCCCTGTCTCGGGCCTCCTCCCAGCACTaGGACTCTGGTGACATCAGG | + |
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Preference number: 4 (lower is better) Translates to: PQMEVESKVPILPHSLSRASSQH*DSGDIR Trigger: CCTGATGTCACCAGAGTCCCAGTGCTGGGAGGAGGC...CCGAGACAGGGAATGAGGCAGTATGGGCACCTTGCTCTCCACCTCCATTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CCA 90 bp | ATAGGTAGCCCGGACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCACGAAGCTTGCCAGCTaGAATGCAGCAGCCATTGCC | + |
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Preference number: 4 (lower is better) Translates to: IGSPDSPHTSAQAGPGAVTKLAS*NAAAIA Trigger: GGCAATGGCTGCTGCATTCCAGCTGGCAAGCTTCGT...GACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTCCGGGCTACCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR TCA 90 bp | CGTGAAGCCATGCTCTGCCTGGCCAAGGAAGATCGTGTCAGAAGTAGGATGACAGCACTGGGACTCTGGTaGCATCAGGGGCAGGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: REAMLCLAKEDRVRSRMTALGLW*HQGQAR Trigger: ACGGGCCTGCCCCTGATGTCACCAGAGTCCCAGTGC...TGTCATCCTACTTCTGACACGATCTTCCTTGGCCAGGCAGAGCATGGCTTCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | CTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGATTTCTAGACTGTGGCCACCAGGTTaGAGGCACGCATCATGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LTPHLCTSRAWSSLPISRLWPPG*RHASCQ Trigger: TTGACATGATGCGTGCCTGCAACCTGGTGGCCACAG...TCTAGAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR GCA 90 bp | GACTCACCCCACACCTCTGCACAAGCAGGGCCTGGAGCAGTCTACCGATTTCTACTGACCCACAACAAGTaGAGCTGTGGCCACCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: DSPHTSAQAGPGAVYRFLLTHNK*SCGHQV Trigger: AACCTGGTGGCCACAGCTGCACTTGTTGTGGGTCAG...TAGAAATCGGTAGACTGCTCCAGGCCCTGCTTGTGCAGAGGTGTGGGGTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTCATTCCCTGTCTCGGCTTCTAGTCTCCACCTTTGAAACTCACATGACGTCACCCGGGGTGCCATaGAGTCCTCCCTCCGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LPHSLSRLLVSTFETHMTSPGVP*SPPSGE Trigger: TTCACCGGAGGGAGGACTGCATGGCACCCCGGGTGA...CGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCGAGACAGGGAATGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | GAAGCCATGCTCTGCCTGGCCAAGGAAGATCGTGTCAGAAGTAGGATGACACAAGAATGCAGCAGCCATTaGCTCCTCCCAGCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: EAMLCLAKEDRVRSRMTQECSSH*LLPALG Trigger: TCCCAGTGCTGGGAGGAGGCAATGGCTGCTGCATTC...TTGTGTCATCCTACTTCTGACACGATCTTCCTTGGCCAGGCAGAGCATGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | CTGCCTCATTCCCTGTCTCGGCTTCTAGTCTCCACCTTTGAAACTCACATGACGGCTTGCCAGCTGGAATaGAGCAGCCATTGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPHSLSRLLVSTFETHMTACQLE*SSHCLL Trigger: GAGGAGGCAATGGCTGCTGCATTCCAGCTGGCAAGC...CGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCGAGACAGGGAATGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR GCA 90 bp | TACCACCTGGTAAGGTCTGGTTGTCAGACCCTTCATGAAAAGATTCCTGGATGTGACGATCACCCGGGGTaGCATGCAGTCCTCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: YHLVRSGCQTLHEKIPGCDDHPG*HAVLPP Trigger: CGGAGGGAGGACTGCATGGCACCCCGGGTGATCGTC...ACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACCTTACCAGGTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CCA 90 bp | CTGCCTCATTCCCTGTCTCGGCTTCTAGTCTCCACCTTTGAAACTCACATGACGGTGCCTCGGGACTCCTaGAAACCTGCTGATTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LPHSLSRLLVSTFETHMTVPRDS*KPADSE Trigger: CTCGGAATCAGCAGGTTTCCAGGAGTCCCGAGGCAC...CGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCGAGACAGGGAATGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CCA 90 bp | CGTGAAGCCATGCTCTGCCTGGCCAAGGAAGATCGTGTCAGAAGTAGGATGACAACGAAGCTTGCCAGCTaGAATGCAGCAGCCATTGCC | + |
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Preference number: 4 (lower is better) Translates to: REAMLCLAKEDRVRSRMTTKLAS*NAAAIA Trigger: GGCAATGGCTGCTGCATTCCAGCTGGCAAGCTTCGT...TGTCATCCTACTTCTGACACGATCTTCCTTGGCCAGGCAGAGCATGGCTTCACG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR TCA 90 bp | CTGCCTCATTCCCTGTCTCGGCTTCTAGTCTCCACCTTTGAAACTCACATGACGGAAGAATGTTCCAGATaGGCATTGCAGCCGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LPHSLSRLLVSTFETHMTEECSR*ALQPPG Trigger: CCCTGGCGGCTGCAATGCTCATCTGGAACATTCTTC...CGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCGAGACAGGGAATGAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR CCA 90 bp | CTGGTAAGGTCTGGTTGTCAGACCCTTCATGAAAAGATTCCTGGATGTCCTGCTCCGTCCTCCAGCGTCTaGTACACCCAATTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LVRSGCQTLHEKIPGCPAPSSSV*YTQLGV Trigger: CACCCCCAATTGGGTGTACCAGACGCTGGAGGACGG...AGCAGGACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACCTTACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR TCA 90 bp | GAAGCCATGCTCTGCCTGGCCAAGGAAGATCGTGTCAGAAGTAGGATGACACAATGTCAAACTGTAGTTTaGCGGTGCCTCGGGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: EAMLCLAKEDRVRSRMTQCQTVV*RCLGTP Trigger: AGGAGTCCCGAGGCACCGTCAAACTACAGTTTGACA...TTGTGTCATCCTACTTCTGACACGATCTTCCTTGGCCAGGCAGAGCATGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CCA 90 bp | AACCGGTACCACCTGGTAAGGTCTGGTTGTCAGACCCTTCATGAAAAGATTCCTCAACAAGTGCAGCTGTaGCCACCAGGTTGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: NRYHLVRSGCQTLHEKIPQQVQL*PPGCRH Trigger: GTGCCTGCAACCTGGTGGCCACAGCTGCACTTGTTG...AGGAATCTTTTCATGAAGGGTCTGACAACCAGACCTTACCAGGTGGTACCGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR GCA 90 bp | GGTCTGGTTGTCAGACCCTTCATGAAAAGATTCCTGGATGTCCTGCTTCGTAAAGGGGGTGAAGGCTGCTaGGTTGTTGAGGATGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GLVVRPFMKRFLDVLLRKGGEGC*VVEDEG Trigger: TCCCTCATCCTCAACAACGCAGCAGCCTTCACCCCC...TTTACGAAGCAGGACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR TCA 90 bp | CTAGACTACAGCGTTATAGTGGTTATTCATAGAGAAAGTCCCTATAAGGGTGCTCAGTCCTCCCTCCGGTaGAGAATGTTCCAGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: LDYSVIVVIHRESPYKGAQSSLR*RMFQMS Trigger: GCTCATCTGGAACATTCTTCACCGGAGGGAGGACTG...AGCACCCTTATAGGGACTTTCTCTATGAATAACCACTATAACGCTGTAGTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS TCA 90 bp | CCCGGGGTGCCATGCAGTCCTCCCTCCGGTGAAGAATGTTCCAGATaGGCATTGCAGCCGCCAGGGTGGCCAGAAGGCAGGCACCAATGT | + |
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Preference number: 5 (lower is better) Translates to: PGVPCSPPSGEECSR*ALQPPGWPEGRHQC Trigger: ACATTGGTGCCTGCCTTCTGGCCACCCTGGCGGCTGCAATGCTCATCTGGAACATTCTTCACCGGAGGGAGGACTGCATGGCACCCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS TCA 90 bp | CGGCTGATGACGATCACCCGGGGTGCCATGCAGTCCTCCCTCCGGTaGAGAATGTTCCAGATGAGCATTGCAGCCGCCAGGGTGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: RLMTITRGAMQSSLR*RMFQMSIAAARVAR Trigger: TCTGGCCACCCTGGCGGCTGCAATGCTCATCTGGAACATTCTTCACCGGAGGGAGGACTGCATGGCACCCCGGGTGATCGTCATCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS TCA 90 bp | CACAGTCATGGGTGTCCACCTGCCCAGTTCGAGTCCCAGGGCTTGTaGCTCCCTTACCCCTGTCCACCAGCCAGCAAGACTTCCACAGCC | + |
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Preference number: 5 (lower is better) Translates to: HSHGCPPAQFESQGL*LPYPCPPASKTSTA Trigger: GGCTGTGGAAGTCTTGCTGGCTGGTGGACAGGGGTAAGGGAGTCACAAGCCCTGGGACTCGAACTGGGCAGGTGGACACCCATGACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS TCA 90 bp | GGTGACATCAGGGGCAGGCCCGTTAGCCCAAGGATGAAGGTGATCTaGCCCACAACAAGTGCAGCTGTGGCCACCAGGTTGCAGGCACGC | + |
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Preference number: 5 (lower is better) Translates to: GDIRGRPVSPRMKVI*PTTSAAVATRLQAR Trigger: GCGTGCCTGCAACCTGGTGGCCACAGCTGCACTTGTTGTGGGTCAGATCACCTTCATCCTTGGGCTAACGGGCCTGCCCCTGATGTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS CCA 90 bp | GACTTCCACAGCCCCACACTCCGCTTGCGTCCGTCCTCCAGCGTCTaGTACACCCAATTGGGGGTGAAGGCTGCTGCGTTGTTGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: DFHSPTLRLRPSSSV*YTQLGVKAAALLRM Trigger: CATCCTCAACAACGCAGCAGCCTTCACCCCCAATTGGGTGTACCAGACGCTGGAGGACGGACGCAAGCGGAGTGTGGGGCTGTGGAAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS GCA 90 bp | GATTCCGAGCCCCATCCTAGAACCTCACAGTCATGGGTGTCCACCTaGCCAGTTCGAGTCCCAGGGCTTGTGACTCCCTTACCCCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: DSEPHPRTSQSWVST*PVRVPGLVTPLPLS Trigger: GGACAGGGGTAAGGGAGTCACAAGCCCTGGGACTCGAACTGGGCAGGTGGACACCCATGACTGTGAGGTTCTAGGATGGGGCTCGGAATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS CCA 90 bp | TGGAAACCTGCTGATTCCGAGCCCCATCCTAGAACCTCACAGTCATaGGTGTCCACCTGCCCAGTTCGAGTCCCAGGGCTTGTGACTCCC | + |
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Preference number: 5 (lower is better) Translates to: WKPADSEPHPRTSQS*VSTCPVRVPGLVTP Trigger: GGGAGTCACAAGCCCTGGGACTCGAACTGGGCAGGTGGACACCCATGACTGTGAGGTTCTAGGATGGGGCTCGGAATCAGCAGGTTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS GCA 90 bp | GCGAAACCGTGCAGTGAGAGAACGGCTGATGACGATCACCCGGGGTaGCATGCAGTCCTCCCTCCGGTGAAGAATGTTCCAGATGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: AKPCSERTADDDHPG*HAVLPPVKNVPDEH Trigger: ATGCTCATCTGGAACATTCTTCACCGGAGGGAGGACTGCATGGCACCCCGGGTGATCGTCATCAGCCGTTCTCTCACTGCACGGTTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS-3UTR CAA 90 bp | CTGGTAAGGTCTGGTTGTCAGACCCTTCATGAAAAGATTCCTGGATGTCCTGCTAGCCCCACACTCCGCTaGCGTCCGTCCTCCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: LVRSGCQTLHEKIPGCPASPTLR*RPSSSV Trigger: GACGCTGGAGGACGGACGCAAGCGGAGTGTGGGGCT...AGCAGGACATCCAGGAATCTTTTCATGAAGGGTCTGACAACCAGACCTTACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CAA 90 bp | CCCCAAATGGAGGTGGAGAGCAAGGTGCCCATACTGCCTCATTCCCTGTCTCGGATGTCAAACTGTAGTTaGACGGTGCCTCGGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: PQMEVESKVPILPHSLSRMSNCS*TVPRDS Trigger: GGAGTCCCGAGGCACCGTCAAACTACAGTTTGACAT...CCGAGACAGGGAATGAGGCAGTATGGGCACCTTGCTCTCCACCTCCATTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CAA 90 bp | CTGCCTCATTCCCTGTCTCGGCTTCTAGTCTCCACCTTTGAAACTCACATGACGAAGGCTGCTGCGTTGTaGAGGATGAGGGAGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: LPHSLSRLLVSTFETHMTKAAAL*RMRETR Trigger: CCTGGTCTCCCTCATCCTCAACAACGCAGCAGCCTT...CGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCGAGACAGGGAATGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS-3UTR CAA 90 bp | CTGCCTCATTCCCTGTCTCGGCTTCTAGTCTCCACCTTTGAAACTCACATGACGGTGAAGGCTGCTGCGTaGTTGAGGATGAGGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: LPHSLSRLLVSTFETHMTVKAAA*LRMRET Trigger: GGTCTCCCTCATCCTCAACAACGCAGCAGCCTTCAC...CGTCATGTGAGTTTCAAAGGTGGAGACTAGAAGCCGAGACAGGGAATGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS CCA 72 bp | AGCCCCACACTCCGCTTGCGTCCGTCCTCCAGCGTCTaGTACACCCAATTGGGGGTGAAGGCTGCTGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: SPTLRLRPSSSV*YTQLGVKAAAL Trigger: CAACGCAGCAGCCTTCACCCCCAATTGGGTGTACCAGACGCTGGAGGACGGACGCAAGCGGAGTGTGGGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS CAA 90 bp | CCCACACTCCGCTTGCGTCCGTCCTCCAGCGTCTGGTACACCCAATaGGGGGTGAAGGCTGCTGCGTTGTTGAGGATGAGGGAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: PTLRLRPSSSVWYTQ*GVKAAALLRMRETR Trigger: CCTGGTCTCCCTCATCCTCAACAACGCAGCAGCCTTCACCCCCAATTGGGTGTACCAGACGCTGGAGGACGGACGCAAGCGGAGTGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS TCA 72 bp | GGGTGTCCACCTGCCCAGTTCGAGTCCCAGGGCTTGTaGCTCCCTTACCCCTGTCCACCAGCCAGCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: GCPPAQFESQGL*LPYPCPPASKT Trigger: AGTCTTGCTGGCTGGTGGACAGGGGTAAGGGAGTCACAAGCCCTGGGACTCGAACTGGGCAGGTGGACACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS GCA 72 bp | CCAGCCAGCAAGACTTCCACAGCCCCACACTCCGCTTaGGTCCGTCCTCCAGCGTCTGGTACACCCAATTGG | + |
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Preference number: 6 (lower is better) Translates to: PASKTSTAPHSA*VRPPASGTPNW Trigger: CCAATTGGGTGTACCAGACGCTGGAGGACGGACGCAAGCGGAGTGTGGGGCTGTGGAAGTCTTGCTGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS TCA 72 bp | CCATGCAGTCCTCCCTCCGGTGAAGAATGTTCCAGATaGGCATTGCAGCCGCCAGGGTGGCCAGAAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PCSPPSGEECSR*ALQPPGWPEGR Trigger: CCTGCCTTCTGGCCACCCTGGCGGCTGCAATGCTCATCTGGAACATTCTTCACCGGAGGGAGGACTGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS TCA 72 bp | ACGATCACCCGGGGTGCCATGCAGTCCTCCCTCCGGTaGAGAATGTTCCAGATGAGCATTGCAGCCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TITRGAMQSSLR*RMFQMSIAAAR Trigger: CCTGGCGGCTGCAATGCTCATCTGGAACATTCTTCACCGGAGGGAGGACTGCATGGCACCCCGGGTGATCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS GCA 72 bp | CAGCGTCTGGTACACCCAATTGGGGGTGAAGGCTGCTaGGTTGTTGAGGATGAGGGAGACCAGGGCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: QRLVHPIGGEGC*VVEDEGDQGHQ Trigger: CTGGTGGCCCTGGTCTCCCTCATCCTCAACAACGCAGCAGCCTTCACCCCCAATTGGGTGTACCAGACGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS CAA 72 bp | CGCTTGCGTCCGTCCTCCAGCGTCTGGTACACCCAATaGGGGGTGAAGGCTGCTGCGTTGTTGAGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: RLRPSSSVWYTQ*GVKAAALLRMR Trigger: CCTCATCCTCAACAACGCAGCAGCCTTCACCCCCAATTGGGTGTACCAGACGCTGGAGGACGGACGCAAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS CAA 72 bp | ACCAGCCAGCAAGACTTCCACAGCCCCACACTCCGCTaGCGTCCGTCCTCCAGCGTCTGGTACACCCAATTG | + |
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Preference number: 6 (lower is better) Translates to: TSQQDFHSPTLR*RPSSSVWYTQL Trigger: CAATTGGGTGTACCAGACGCTGGAGGACGGACGCAAGCGGAGTGTGGGGCTGTGGAAGTCTTGCTGGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS TCA 72 bp | AGGGGCAGGCCCGTTAGCCCAAGGATGAAGGTGATCTaGCCCACAACAAGTGCAGCTGTGGCCACCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RGRPVSPRMKVI*PTTSAAVATRL Trigger: CAACCTGGTGGCCACAGCTGCACTTGTTGTGGGTCAGATCACCTTCATCCTTGGGCTAACGGGCCTGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS CCA 72 bp | GCTGATTCCGAGCCCCATCCTAGAACCTCACAGTCATaGGTGTCCACCTGCCCAGTTCGAGTCCCAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ADSEPHPRTSQS*VSTCPVRVPGL Trigger: AAGCCCTGGGACTCGAACTGGGCAGGTGGACACCCATGACTGTGAGGTTCTAGGATGGGGCTCGGAATCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS GCA 72 bp | CCCCATCCTAGAACCTCACAGTCATGGGTGTCCACCTaGCCAGTTCGAGTCCCAGGGCTTGTGACTCCCTTA | + |
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Preference number: 6 (lower is better) Translates to: PHPRTSQSWVST*PVRVPGLVTPL Trigger: TAAGGGAGTCACAAGCCCTGGGACTCGAACTGGGCAGGTGGACACCCATGACTGTGAGGTTCTAGGATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024984.7 |
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| CDS TCA 72 bp | TGTAAGGGCCAATTCTGTAGAAGGTCACCAGTCCGATaGCCAGCACGAAGCTTGCCAGCTGGAATGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CKGQFCRRSPVR*PARSLPAGMQQ Trigger: CTGCTGCATTCCAGCTGGCAAGCTTCGTGCTGGTCATCGGACTGGTGACCTTCTACAGAATTGGCCCTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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| CDS CCA 72 bp | AGGCACCAATGTTCAGGTAGCAAGACCAAGATAAGTTaGTGTAAGGGCCAATTCTGTAGAAGGTCACCAGTC | + |
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Preference number: 6 (lower is better) Translates to: RHQCSGSKTKIS*CKGQFCRRSPV Trigger: GACTGGTGACCTTCTACAGAATTGGCCCTTACACCAACTTATCTTGGTCTTGCTACCTGAACATTGGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024984.7 ENSMUST00000153745.2 |
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