Pregenerated sensors for TMEM200C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095407Ensembl transcript IDs: ENSMUST00000178545.3, ENSMUST00000233019.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GAACGTAATTCAAGGATAATATTCTGCAGCTCTTTGGATATTGAATaGTTTCCTCGGACCTGTCCACAGGGGAATCGGGGTAGGGTGGGT | + |
Preference number: 1 (lower is better) Translates to: ERNSRIIFCSSLDIE*FPRTCPQGNRGRVG Trigger: ACCCACCCTACCCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATATTATCCTTGAATTACGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR GCA 90 bp | TGTACTTGGTCTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTaGTGGCGCCCTCTGGTCTTCACATACCCTGGTAGCAAAATTCAA | + |
Preference number: 1 (lower is better) Translates to: CTWSCEFKNVTIQCS*WRPLVFTYPGSKIQ Trigger: TTGAATTTTGCTACCAGGGTATGTGAAGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAGACCAAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR CCA 90 bp | ACTTGGTCTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTaGCGCCCTCTGGTCTTCACATACCCTGGTAGCAAAATTCAAATA | + |
Preference number: 1 (lower is better) Translates to: TWSCEFKNVTIQCSC*RPLVFTYPGSKIQI Trigger: TATTTGAATTTTGCTACCAGGGTATGTGAAGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAGACCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR GCA 90 bp | AGTTATCTACAGGAAGCTTGTGAACGTAATTCAAGGATAATATTCTaGAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAG | + |
Preference number: 1 (lower is better) Translates to: SYLQEACERNSRIIF*SSLDIEWFPRTCPQ Trigger: CTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATATTATCCTTGAATTACGTTCACAAGCTTCCTGTAGATAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR GCA 90 bp | AGAAAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTaGAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACAAGCAG | + |
Preference number: 1 (lower is better) Translates to: RKFNSKRIDTNSSRL*KRAEIKSLLFLYKQ Trigger: CTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR-3UTR TCA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTCAGCTCTTTGGATATTaGATGGTTTCCTCGGACCTG | + |
Preference number: 2 (lower is better) Translates to: LVSLRMSQSSVVAGALWSQLFGY*MVSSDL Trigger: CAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTG...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR CAA 90 bp | GACACAAACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTaGTTATTCCTTTACAAGCAGCTACGGATGAAGTCAGCAGCAGAG | + |
Preference number: 2 (lower is better) Translates to: DTNSSRLCKRAEIKS*LFLYKQLRMKSAAE Trigger: CTCTGCTGCTGACTTCATCCGTAGCTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR-3UTR CCA 90 bp | AAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTGCAAGAGGGCAGAAGCTGGGCGGGGCTaGACAAAGAAAAATAGGAGT | + |
Preference number: 2 (lower is better) Translates to: KFNSKRIDTNSSRLCKRAEAGRG*TKKNRS Trigger: ACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC...TGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR-3UTR CCA 90 bp | AAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTGCAAGAGGGCATCTTTGGATATTGAATaGTTTCCTCGGACCTGTCCA | + |
Preference number: 2 (lower is better) Translates to: KFNSKRIDTNSSRLCKRASLDIE*FPRTCP Trigger: TGGACAGGTCCGAGGAAACCATTCAATATCCAAAGA...TGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR-3UTR CCA 90 bp | ATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTTATTCTGCAGCTCTTTaGATATTGAATGGTTTCCTC | + |
Preference number: 2 (lower is better) Translates to: IHLVFIERTITIGRKKTTYSAAL*ILNGFL Trigger: GAGGAAACCATTCAATATCCAAAGAGCTGCAGAATA...AGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR GCA 72 bp | TCTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTaGTGGCGCCCTCTGGTCTTCACATACCCTGGTAGC | + |
Preference number: 3 (lower is better) Translates to: SCEFKNVTIQCS*WRPLVFTYPGS Trigger: GCTACCAGGGTATGTGAAGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR-3UTR CAA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTGCAGCTCTTTGGATATaGAATGGTTTCCTCGGACCT | + |
Preference number: 3 (lower is better) Translates to: LVSLRMSQSSVVAGALWSAALWI*NGFLGP Trigger: AGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGC...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR CCA 72 bp | TGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTaGCGCCCTCTGGTCTTCACATACCCTGGTAGCAAA | + |
Preference number: 3 (lower is better) Translates to: CEFKNVTIQCSC*RPLVFTYPGSK Trigger: TTTGCTACCAGGGTATGTGAAGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR-3UTR CAA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTATATTCTGCAGCTCTTaGGATATTGAATGGTTTCCT | + |
Preference number: 3 (lower is better) Translates to: LVSLRMSQSSVVAGALWSIFCSS*DIEWFP Trigger: AGGAAACCATTCAATATCCAAAGAGCTGCAGAATAT...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR GCA 72 bp | CAGGAAGCTTGTGAACGTAATTCAAGGATAATATTCTaGAGCTCTTTGGATATTGAATGGTTTCCTCGGACC | + |
Preference number: 3 (lower is better) Translates to: QEACERNSRIIF*SSLDIEWFPRT Trigger: GGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATATTATCCTTGAATTACGTTCACAAGCTTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | TGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAATCGGGGTAGGGTGGGCCAGGCCGCGTACCTaGGGGTCCTGGGCAAGCGGC | + |
Preference number: 4 (lower is better) Translates to: WILNGFLGPVHRGIGVGWARPRT*GSWASG Trigger: GCCGCTTGCCCAGGACCCGCAGGTACGCGGCCTGGC...CCACCCTACCCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | TGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAATCGGGGTAGGGTGGCGAGGGAGCTGGTGGTaGTCTGGCGCCCCCAACTCC | + |
Preference number: 4 (lower is better) Translates to: WILNGFLGPVHRGIGVGWRGSWW*SGAPNS Trigger: GGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCG...CCACCCTACCCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GGAGCGAGGGAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGGCTCCGCCCTAGTTaGCCCTGGACTGGGACCCTC | + |
Preference number: 4 (lower is better) Translates to: GAREAGRGWTKKNRSKVQRLRPS*PWTGTL Trigger: GAGGGTCCCAGTCCAGGGCCAACTAGGGCGGAGCCT...CTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTCCCTCGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | GGAGCGAGGGAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGCGCAGCAGCAGCTGCTaGCAGATCTTTGGCGCGGAG | + |
Preference number: 4 (lower is better) Translates to: GAREAGRGWTKKNRSKVQRSSSC*QIFGAE Trigger: CTCCGCGCCAAAGATCTGGCAGCAGCTGCTGCTGCG...CTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTCCCTCGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR TCA 90 bp | TGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAATCGGGGTAGGGTGGCATTGCTGCTGTTGCTaGTGGCCCCAATGCGATGGC | + |
Preference number: 4 (lower is better) Translates to: WILNGFLGPVHRGIGVGWHCCCC*WPQCDG Trigger: GCCATCGCATTGGGGCCATCAGCAACAGCAGCAATG...CCACCCTACCCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR TCA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTTGGACAGCGCGGAGATaGAGCCAGGTCCGGCGGGGA | + |
Preference number: 4 (lower is better) Translates to: LVSLRMSQSSVVAGALWSWTARR*SQVRRG Trigger: TCCCCGCCGGACCTGGCTTCATCTCCGCGCTGTCCA...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTCCTGCCCCCTGGCGGTaGGTGCTGTCTTCGCGCCCT | + |
Preference number: 4 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCPAPWR*VLSSRP Trigger: AGGGCGCGAAGACAGCACGCACCGCCAGGGGGCAGG...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTTCCAGCCCAGTGGGGTaGGGCCATGAACCCCTGGCC | + |
Preference number: 4 (lower is better) Translates to: LVSLRMSQSSVVAGALWSSSPVG*GHEPLA Trigger: GGCCAGGGGTTCATGGCCCCACCCCACTGGGCTGGA...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTGGGCTCGGGCGACGGTaGAGCCCGATAGTCCGGGAG | + |
Preference number: 4 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCGLGRR*SPIVRE Trigger: CTCCCGGACTATCGGGCTCCACCGTCGCCCGAGCCC...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR TCA 90 bp | GGAGCGAGGGAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGTCCCACAAAGGGCAATaGGCCCCGAGATGGAGCACA | + |
Preference number: 4 (lower is better) Translates to: GAREAGRGWTKKNRSKVQSHKGQ*APRWST Trigger: TGTGCTCCATCTCGGGGCTCATTGCCCTTTGTGGGA...CTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTCCCTCGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GCAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAATCGGGCTCTGTTGGCGGCGTTaGCTTTTGGCCAGTAGCCCA | + |
Preference number: 4 (lower is better) Translates to: AALWILNGFLGPVHRGIGLCWRR*LLASSP Trigger: TGGGCTACTGGCCAAAAGCCAACGCCGCCAACAGAG...CCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTCCACGAGGGAGCTGGTaGTGCTCTGGCGCCCCCAAC | + |
Preference number: 4 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCPRGSW*CSGAPN Trigger: GTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGG...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTACCCCTGGCCAGCATTaGAGCAGCCCCAAAGGCGTC | + |
Preference number: 4 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCTPGQH*SSPKGV Trigger: GACGCCTTTGGGGCTGCTGCAATGCTGGCCAGGGGT...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | CTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACAAGCAGCTACGGATGCCCGCGCAGCTGCCTaGCTTCAGCTCCAGGCCTCG | + |
Preference number: 4 (lower is better) Translates to: LQEGRNKKLVIPLQAATDARAAA*LQLQAS Trigger: CGAGGCCTGGAGCTGAAGCCAGGCAGCTGCGCGGGC...ATCCGTAGCTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTTTGTGGCCGCCCTGCCCCCTaGCGGTGCGTGCTGTCTTCG | + |
Preference number: 4 (lower is better) Translates to: IWFSSNVQSPSDVKRRLCGRPAP*RCVLSS Trigger: CGAAGACAGCACGCACCGCCAGGGGGCAGGGCGGCC...ACAAAGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTAGTCCGGGAGCCCACTaGTGCTGCGGCGCCGCCAGG | + |
Preference number: 4 (lower is better) Translates to: IHLVFIERTITIGRKKTTSPGAH*CCGAAR Trigger: CCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACT...AGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTTGCGCTCGAGGAGGGTaGGGGCTCGGGCGACGGTGG | + |
Preference number: 4 (lower is better) Translates to: IHLVFIERTITIGRKKTTCARGG*GLGRRW Trigger: CCACCGTCGCCCGAGCCCCCACCCTCCTCGAGCGCA...AGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | GGAGCGAGGGAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGCACAGCTTCAGTTTaGCTTTCACCACCACCACGT | + |
Preference number: 4 (lower is better) Translates to: GAREAGRGWTKKNRSKVQSTASV*LSPPPR Trigger: ACGTGGTGGTGGTGAAAGGCAAACTGAAGCTGTGCT...CTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTCCCTCGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | CTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACAAGCAGCTACGGATCAGAGCCCGCGCAGCTaGCTGGCTTCAGCTCCAGGC | + |
Preference number: 4 (lower is better) Translates to: LQEGRNKKLVIPLQAATDQSPRS*LASAPG Trigger: GCCTGGAGCTGAAGCCAGGCAGCTGCGCGGGCTCTG...ATCCGTAGCTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | ATATTCTGCAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAGCGCTCGCGGTAGATaGTGTACACGGCCTCTGTCA | + |
Preference number: 4 (lower is better) Translates to: IFCSSLDIEWFPRTCPQGSARGR*CTRPLS Trigger: TGACAGAGGCCGTGTACAGCATCTACCGCGAGCGCT...CCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | TGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAATCGGGGTAGGGTGGTCCTTGTTTGTAAACTaGCTCTGCACAGACAGAGGC | + |
Preference number: 4 (lower is better) Translates to: WILNGFLGPVHRGIGVGWSLFVN*LCTDRG Trigger: GCCTCTGTCTGTGCAGAGGCAGTTTACAAACAAGGA...CCACCCTACCCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | TGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAATCGGGGTAGGGTGGAGAGTGGCTCTTGGCTaGGTTTTTGTTGCCATTGCT | + |
Preference number: 4 (lower is better) Translates to: WILNGFLGPVHRGIGVGWRVALG*VFVAIA Trigger: AGCAATGGCAACAAAAACCCAGCCAAGAGCCACTCT...CCACCCTACCCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GGAGCGAGGGAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGTCCCAGAGTGGCTCTTaGCTGGGTTTTTGTTGCCAT | + |
Preference number: 4 (lower is better) Translates to: GAREAGRGWTKKNRSKVQSQSGS*LGFCCH Trigger: ATGGCAACAAAAACCCAGCCAAGAGCCACTCTGGGA...CTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTCCCTCGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACCGTACCTGCGGGTCCTaGGCAAGCGGCCGCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYRTCGS*ASGRPA Trigger: GGCAGGGCGGCCGCTTGCCCAGGACCCGCAGGTACG...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR TCA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACGGGGACCCTGCCTCCTaGGTCTCACCGCTGCCTCCG | + |
Preference number: 4 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYGDPAS*VSPLPP Trigger: CGGAGGCAGCGGTGAGACTCAGGAGGCAGGGTCCCC...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTCCACGGCCATGGCTATaGCCACCAATAGCACTAGGA | + |
Preference number: 4 (lower is better) Translates to: LVSLRMSQSSVVAGALWSPRPWL*PPIALG Trigger: TCCTAGTGCTATTGGTGGGCATAGCCATGGCCGTGG...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTTTGGCGCGGAGACTGTaGACGTCGATGACAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: LVSLRMSQSSVVAGALWSLARRL*TSMTVE Trigger: TTCCACTGTCATCGACGTGCACAGTCTCCGCGCCAA...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GATCTTTTAATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAACCCCCAACTCCCGGTTaGGCTGCAGGGCGCCGGGCT | + |
Preference number: 4 (lower is better) Translates to: DLLIHLVFIERTITIGRKPPTPG*AAGRRA Trigger: AGCCCGGCGCCCTGCAGCCCAACCGGGAGTTGGGGG...TTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTATTAAAAGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | AAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTGCAAGAGGGCAGGTCCAGTTCTCCCCTaGGGAGATCCCGGGAGCCGC | + |
Preference number: 4 (lower is better) Translates to: KFNSKRIDTNSSRLCKRAGPVLP*GDPGSR Trigger: GCGGCTCCCGGGATCTCCCCAGGGGAGAACTGGACC...TGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTCAATGCGATGGCTACTaGCCACAGGCAGTAACTGCT | + |
Preference number: 4 (lower is better) Translates to: LVSLRMSQSSVVAGALWSQCDGY*PQAVTA Trigger: AGCAGTTACTGCCTGTGGGCAGTAGCCATCGCATTG...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | ATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTTTGTTCCCCGGGAGGTCTATaGCAGCTGCAGCTTGCGCCC | + |
Preference number: 4 (lower is better) Translates to: IWFSSNVQSPSDVKRRLCSPGGL*QLQLAP Trigger: GGGCGCAAGCTGCAGCTGGCATAGACCTCCCGGGGA...ACAAAGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTTTGTGGGGCCATGAACCCCTaGCCAGCATTGCAGCAGCCC | + |
Preference number: 4 (lower is better) Translates to: IWFSSNVQSPSDVKRRLCGAMNP*PALQQP Trigger: GGGCTGCTGCAATGCTGGCCAGGGGTTCATGGCCCC...ACAAAGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GATCTTTTAATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAGCCCACGAGGGAGCTaGTGGTGCTCTGGCGCCCCC | + |
Preference number: 4 (lower is better) Translates to: DLLIHLVFIERTITIGRKSPRGS*WCSGAP Trigger: GGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCT...TTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTATTAAAAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATATTCTGCAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAGTCTAGCCTTTTCTTaGCCACCACATCCACGACCG | + |
Preference number: 4 (lower is better) Translates to: IFCSSLDIEWFPRTCPQGSLAFS*PPHPRP Trigger: CGGTCGTGGATGTGGTGGCCAAGAAAAGGCTAGACT...CCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATATTCTGCAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGGGGGTCTTCTACTCCTaGGGTGTGAGACCTGGAAAT | + |
Preference number: 4 (lower is better) Translates to: IFCSSLDIEWFPRTCPQGGVFYS*GVRPGN Trigger: ATTTCCAGGTCTCACACCCCAGGAGTAGAAGACCCC...CCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATAT 50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR TCA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTCCGCGTTGGCGCAAATaGAGAGGAAGATGCCTATAC | + |
Preference number: 4 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCPRWRK*RGRCLY Trigger: GTATAGGCATCTTCCTCTTCATTTGCGCCAACGCGG...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | CTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACAAGCAGCTACGGATCTGTCCCGATCCCCTTaGAAGGGCAACAGGGCGAAG | + |
Preference number: 4 (lower is better) Translates to: LQEGRNKKLVIPLQAATDLSRSP*KGNRAK Trigger: CTTCGCCCTGTTGCCCTTGCAAGGGGATCGGGACAG...ATCCGTAGCTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | GATCTTTTAATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAACGCCCTAGTTGGCCCTaGACTGGGACCCTCGGGGGA | + |
Preference number: 4 (lower is better) Translates to: DLLIHLVFIERTITIGRKRPSWP*TGTLGG Trigger: TCCCCCGAGGGTCCCAGTCCAGGGCCAACTAGGGCG...TTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTATTAAAAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTTGTAGCCCTTATTGCTaGTGGACTGGTCATCCGACT | + |
Preference number: 4 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCCSPYC*WTGHPT Trigger: AGTCGGATGACCAGTCCAGCAGCAATAAGGGCTACA...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACCCACAGAACTGGAGTTaGCACCCCCTGGGGTCCCAG | + |
Preference number: 4 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYPQNWS*HPLGSQ Trigger: CTGGGACCCCAGGGGGTGCCAACTCCAGTTCTGTGG...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACGGAAGAGGAGGTGGCTaGAGATCTTGCAGGAGGCGG | + |
Preference number: 4 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYGRGGG*RSCRRR Trigger: CCGCCTCCTGCAAGATCTGCAGCCACCTCCTCTTCC...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTTTGTCCTGGGGTCCCAGAGTaGCTCTTGGCTGGGTTTTTG | + |
Preference number: 4 (lower is better) Translates to: IWFSSNVQSPSDVKRRLCPGVPE*LLAGFL Trigger: CAAAAACCCAGCCAAGAGCCACTCTGGGACCCCAGG...ACAAAGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTAGAAGCCCACCGACGTaGAGGAGGAAGAGGAAGAGG | + |
Preference number: 4 (lower is better) Translates to: IHLVFIERTITIGRKKTTRSPPT*RRKRKR Trigger: CCTCTTCCTCTTCCTCCTCCACGTCGGTGGGCTTCT...AGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACCAGGCAGTAACTGCTTaGTCCCACCTCTGTTGGCGG | + |
Preference number: 4 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYQAVTA*SHLCWR Trigger: CCGCCAACAGAGGTGGGAGCAAGCAGTTACTGCCTG...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | GATCTTTTAATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAGAGGTCTATGCCAGCTaGAGCTTGCGCCCTCCGAGT | + |
Preference number: 4 (lower is better) Translates to: DLLIHLVFIERTITIGRKEVYAS*SLRPPS Trigger: ACTCGGAGGGCGCAAGCTGCAGCTGGCATAGACCTC...TTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTATTAAAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR GCA 90 bp | AAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTGCAAGAGGGCAGGGTGTAGCCCTTATTaGTGCTGGACTGGTCATCCG | + |
Preference number: 4 (lower is better) Translates to: KFNSKRIDTNSSRLCKRAGCSPY*CWTGHP Trigger: CGGATGACCAGTCCAGCAGCAATAAGGGCTACACCC...TGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACAGCCCACCACGGCCATaGCTATGCCCACCAATAGCA | + |
Preference number: 4 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYSPPRP*LCPPIA Trigger: TGCTATTGGTGGGCATAGCCATGGCCGTGGTGGGCT...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR TCA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACGACTGTGCACGTCGATaGCAGTGGAATAGAGGTCCC | + |
Preference number: 4 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYDCARR*QWNRGP Trigger: GGGACCTCTATTCCACTGTCATCGACGTGCACAGTC...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CCA 90 bp | ATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTAGCCCTTATTGCTGCTaGACTGGTCATCCGACTGAG | + |
Preference number: 4 (lower is better) Translates to: IHLVFIERTITIGRKKTTSPYCC*TGHPTE Trigger: CTCAGTCGGATGACCAGTCCAGCAGCAATAAGGGCT...AGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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3UTR CAA 72 bp | TCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTaGTTATTCCTTTACAAGCAGCTACGGATGAAGTCA | + |
Preference number: 4 (lower is better) Translates to: SSRLCKRAEIKS*LFLYKQLRMKS Trigger: TGACTTCATCCGTAGCTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | CGCCGCCAGGCCGCGTACCTGCGGGTCCTGGGCAAGCGGCCGCCCTaGCCCCTGGCGGTGCGTGCTGTCTTCGCGCCCTCGGGCTCCCCG | + |
Preference number: 5 (lower is better) Translates to: RRQAAYLRVLGKRPP*PLAVRAVFAPSGSP Trigger: CGGGGAGCCCGAGGGCGCGAAGACAGCACGCACCGCCAGGGGGCAGGGCGGCCGCTTGCCCAGGACCCGCAGGTACGCGGCCTGGCGGCG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | AGTCCGGGAGCCCACTGGTGCTGCGGCGCCGCCAGGCCGCGTACCTaGGGGTCCTGGGCAAGCGGCCGCCCTGCCCCCTGGCGGTGCGTG | + |
Preference number: 5 (lower is better) Translates to: SPGAHWCCGAARPRT*GSWASGRPAPWRCV Trigger: CACGCACCGCCAGGGGGCAGGGCGGCCGCTTGCCCAGGACCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | AGGCCGCGTACCTGCGGGTCCTGGGCAAGCGGCCGCCCTGCCCCCTaGCGGTGCGTGCTGTCTTCGCGCCCTCGGGCTCCCCGGGCTCGC | + |
Preference number: 5 (lower is better) Translates to: RPRTCGSWASGRPAP*RCVLSSRPRAPRAR Trigger: GCGAGCCCGGGGAGCCCGAGGGCGCGAAGACAGCACGCACCGCCAGGGGGCAGGGCGGCCGCTTGCCCAGGACCCGCAGGTACGCGGCCT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | GCCCACTGGTGCTGCGGCGCCGCCAGGCCGCGTACCTGCGGGTCCTaGGCAAGCGGCCGCCCTGCCCCCTGGCGGTGCGTGCTGTCTTCG | + |
Preference number: 5 (lower is better) Translates to: AHWCCGAARPRTCGS*ASGRPAPWRCVLSS Trigger: CGAAGACAGCACGCACCGCCAGGGGGCAGGGCGGCCGCTTGCCCAGGACCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | GCTCGGGCGACGGTGGAGCCCGATAGTCCGGGAGCCCACTGGTGCTaGGGCGCCGCCAGGCCGCGTACCTGCGGGTCCTGGGCAAGCGGC | + |
Preference number: 5 (lower is better) Translates to: ARATVEPDSPGAHWC*GAARPRTCGSWASG Trigger: GCCGCTTGCCCAGGACCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACTATCGGGCTCCACCGTCGCCCGAGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | GGGGCTCGGGCGACGGTGGAGCCCGATAGTCCGGGAGCCCACTGGTaGTGCGGCGCCGCCAGGCCGCGTACCTGCGGGTCCTGGGCAAGC | + |
Preference number: 5 (lower is better) Translates to: GARATVEPDSPGAHW*CGAARPRTCGSWAS Trigger: GCTTGCCCAGGACCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACTATCGGGCTCCACCGTCGCCCGAGCCCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | GTGGGGGCTCGGGCGACGGTGGAGCCCGATAGTCCGGGAGCCCACTaGTGCTGCGGCGCCGCCAGGCCGCGTACCTGCGGGTCCTGGGCA | + |
Preference number: 5 (lower is better) Translates to: VGARATVEPDSPGAH*CCGAARPRTCGSWA Trigger: TGCCCAGGACCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACTATCGGGCTCCACCGTCGCCCGAGCCCCCAC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | ACAGGGCGAAGGCGCTCAGCGAGGAGCCCACGAGGGAGCTGGTGGTaGTCTGGCGCCCCCAACTCCCGGTTGGGCTGCAGGGCGCCGGGC | + |
Preference number: 5 (lower is better) Translates to: TGRRRSARSPRGSWW*SGAPNSRLGCRAPG Trigger: GCCCGGCGCCCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAGCGCCTTCGCCCTGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | GCGAAGGCGCTCAGCGAGGAGCCCACGAGGGAGCTGGTGGTGCTCTaGCGCCCCCAACTCCCGGTTGGGCTGCAGGGCGCCGGGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: AKALSEEPTRELVVL*RPQLPVGLQGAGLL Trigger: CAGCAGCCCGGCGCCCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAGCGCCTTCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | GCAACAGGGCGAAGGCGCTCAGCGAGGAGCCCACGAGGGAGCTGGTaGTGCTCTGGCGCCCCCAACTCCCGGTTGGGCTGCAGGGCGCCG | + |
Preference number: 5 (lower is better) Translates to: ATGRRRSARSPRGSW*CSGAPNSRLGCRAP Trigger: CGGCGCCCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAGCGCCTTCGCCCTGTTGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | AGGGCAACAGGGCGAAGGCGCTCAGCGAGGAGCCCACGAGGGAGCTaGTGGTGCTCTGGCGCCCCCAACTCCCGGTTGGGCTGCAGGGCG | + |
Preference number: 5 (lower is better) Translates to: RATGRRRSARSPRGS*WCSGAPNSRLGCRA Trigger: CGCCCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAGCGCCTTCGCCCTGTTGCCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS TCA 90 bp | CACGGCCTCTGTCAGACTTGGGGGCTCCCGTGGACAGCGCGGAGATaGAGCCAGGTCCGGCGGGGACCCTGCCTCCTGAGTCTCACCGCT | + |
Preference number: 5 (lower is better) Translates to: HGLCQTWGLPWTARR*SQVRRGPCLLSLTA Trigger: AGCGGTGAGACTCAGGAGGCAGGGTCCCCGCCGGACCTGGCTTCATCTCCGCGCTGTCCACGGGAGCCCCCAAGTCTGACAGAGGCCGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | CTGCAGCTTGCGCCCTCCGAGTCCCCGTCTCTGTCCCGATCCCCTTaGAAGGGCAACAGGGCGAAGGCGCTCAGCGAGGAGCCCACGAGG | + |
Preference number: 5 (lower is better) Translates to: LQLAPSESPSLSRSP*KGNRAKALSEEPTR Trigger: CCTCGTGGGCTCCTCGCTGAGCGCCTTCGCCCTGTTGCCCTTGCAAGGGGATCGGGACAGAGACGGGGACTCGGAGGGCGCAAGCTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | CTGTGGTCCGGCGATGGCCAGCCCTACTGGAGCGCTCGCGGTAGATaGTGTACACGGCCTCTGTCAGACTTGGGGGCTCCCGTGGACAGC | + |
Preference number: 5 (lower is better) Translates to: LWSGDGQPYWSARGR*CTRPLSDLGAPVDS Trigger: GCTGTCCACGGGAGCCCCCAAGTCTGACAGAGGCCGTGTACAGCATCTACCGCGAGCGCTCCAGTAGGGCTGGCCATCGCCGGACCACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | CTGCAGATCTTGCAGGAGGCGGACTCCAGGGCCCGCCCACAGAACTaGAGTTGGCACCCCCTGGGGTCCCAGAGTGGCTCTTGGCTGGGT | + |
Preference number: 5 (lower is better) Translates to: LQILQEADSRARPQN*SWHPLGSQSGSWLG Trigger: ACCCAGCCAAGAGCCACTCTGGGACCCCAGGGGGTGCCAACTCCAGTTCTGTGGGCGGGCCCTGGAGTCCGCCTCCTGCAAGATCTGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | CCGCAGCCACCGCGGCAACTGTGGTCCGGCGATGGCCAGCCCTACTaGAGCGCTCGCGGTAGATGCTGTACACGGCCTCTGTCAGACTTG | + |
Preference number: 5 (lower is better) Translates to: PQPPRQLWSGDGQPY*SARGRCCTRPLSDL Trigger: CAAGTCTGACAGAGGCCGTGTACAGCATCTACCGCGAGCGCTCCAGTAGGGCTGGCCATCGCCGGACCACAGTTGCCGCGGTGGCTGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | CATTGCAGCAGCCCCAAAGGCGTCCGCAGAGCCCGCGCAGCTGCCTaGCTTCAGCTCCAGGCCTCGAGATTGCACGTAGCTGAGAAAGCC | + |
Preference number: 5 (lower is better) Translates to: HCSSPKGVRRARAAA*LQLQASRLHVAEKA Trigger: GGCTTTCTCAGCTACGTGCAATCTCGAGGCCTGGAGCTGAAGCCAGGCAGCTGCGCGGGCTCTGCGGACGCCTTTGGGGCTGCTGCAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | TGCCCACAGGCAGTAACTGCTTGCTCCCACCTCTGTTGGCGGCGTTaGCTTTTGGCCAGTAGCCCACCACGGCCATGGCTATGCCCACCA | + |
Preference number: 5 (lower is better) Translates to: CPQAVTACSHLCWRR*LLASSPPRPWLCPP Trigger: TGGTGGGCATAGCCATGGCCGTGGTGGGCTACTGGCCAAAAGCCAACGCCGCCAACAGAGGTGGGAGCAAGCAGTTACTGCCTGTGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | TGTAAACTGCCTCTGCACAGACAGAGGCTCCGCCCTAGTTGGCCCTaGACTGGGACCCTCGGGGGAGCTGTGCTCAGTACTGGGATCTGT | + |
Preference number: 5 (lower is better) Translates to: CKLPLHRQRLRPSWP*TGTLGGAVLSTGIC Trigger: ACAGATCCCAGTACTGAGCACAGCTCCCCCGAGGGTCCCAGTCCAGGGCCAACTAGGGCGGAGCCTCTGTCTGTGCAGAGGCAGTTTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 90 bp | CTTGTTTGTAAACTGCCTCTGCACAGACAGAGGCTCCGCCCTAGTTaGCCCTGGACTGGGACCCTCGGGGGAGCTGTGCTCAGTACTGGG | + |
Preference number: 5 (lower is better) Translates to: LVCKLPLHRQRLRPS*PWTGTLGGAVLSTG Trigger: CCCAGTACTGAGCACAGCTCCCCCGAGGGTCCCAGTCCAGGGCCAACTAGGGCGGAGCCTCTGTCTGTGCAGAGGCAGTTTACAAACAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | GGAGCGAGGGAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAACCCCTGGCCAGCATaGCAGCAGCCCCAAAGGCGT | + |
Preference number: 5 (lower is better) Translates to: GAREAGRGWTKKNRSKVQNPWPA*QQPQRR Trigger: ACGCCTTTGGGGCTGCTGCAATGCTGGCCAGGGGTT...CTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTCCCTCGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS TCA 90 bp | CAGAGTGGCTCTTGGCTGGGTTTTTGTTGCCATTGCTGCTGTTGCTaGTGGCCCCAATGCGATGGCTACTGCCCACAGGCAGTAACTGCT | + |
Preference number: 5 (lower is better) Translates to: QSGSWLGFCCHCCCC*WPQCDGYCPQAVTA Trigger: AGCAGTTACTGCCTGTGGGCAGTAGCCATCGCATTGGGGCCATCAGCAACAGCAGCAATGGCAACAAAAACCCAGCCAAGAGCCACTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 90 bp | GACCTGGAAATGAGGAAGAGTTTCTCCTTGTTTGTAAACTGCCTCTaGACAGACAGAGGCTCCGCCCTAGTTGGCCCTGGACTGGGACCC | + |
Preference number: 5 (lower is better) Translates to: DLEMRKSFSLFVNCL*TDRGSALVGPGLGP Trigger: GGGTCCCAGTCCAGGGCCAACTAGGGCGGAGCCTCTGTCTGTGCAGAGGCAGTTTACAAACAAGGAGAAACTCTTCCTCATTTCCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | CTTGTGAGTTTAAGAATGTCACAATCCAGTGTAGTTGCTGGCGCCCTCTGGTCTTATGCCAGCTGCAGCTaGCGCCCTCCGAGTCCCCGT | + |
Preference number: 5 (lower is better) Translates to: LVSLRMSQSSVVAGALWSYASCS*RPPSPR Trigger: ACGGGGACTCGGAGGGCGCAAGCTGCAGCTGGCATA...AGACCAGAGGGCGCCAGCAACTACACTGGATTGTGACATTCTTAAACTCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS TCA 90 bp | CCATGGCTATGCCCACCAATAGCACTAGGATCCCACAAAGGGCAATaGGCCCCGAGATGGAGCACAGCTTCAGTTTGCCTTTCACCACCA | + |
Preference number: 5 (lower is better) Translates to: PWLCPPIALGSHKGQ*APRWSTASVCLSPP Trigger: TGGTGGTGAAAGGCAAACTGAAGCTGTGCTCCATCTCGGGGCTCATTGCCCTTTGTGGGATCCTAGTGCTATTGGTGGGCATAGCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | GCAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAATCGGGTTGGCTGGGTTTTTGTaGCCATTGCTGCTGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: AALWILNGFLGPVHRGIGLAGFL*PLLLLL Trigger: CAGCAACAGCAGCAATGGCAACAAAAACCCAGCCAA...CCCGATTCCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | ATATTCTGCAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGTTCTTGGCTTTCCTCTaGCGCTTAGGGACCTGGCTG | + |
Preference number: 5 (lower is better) Translates to: IFCSSLDIEWFPRTCPQGFLAFL*RLGTWL Trigger: CAGCCAGGTCCCTAAGCGCAAGAGGAAAGCCAAGAA...CCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTACAGGCAGTAACTGCTaGCTCCCACCTCTGTTGGCG | + |
Preference number: 5 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCTGSNC*LPPLLA Trigger: CGCCAACAGAGGTGGGAGCAAGCAGTTACTGCCTGT...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | GAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGAGTTACTGTCTCCAGGCCTCGAGATaGCACGTAGCTGAGAAAGCC | + |
Preference number: 5 (lower is better) Translates to: EAGRGWTKKNRSKVQSYCLQASR*HVAEKA Trigger: GGCTTTCTCAGCTACGTGCAATCTCGAGGCCTGGAG...ACAGTAACTCTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | GGAGCGAGGGAAGCTGGGCGGGGCTGGACAAAGAAAAATAGGAGTAAAGTACAGTTTTTACGCCTCTTCTaGGCTTTCCTCTTGCGCTTA | + |
Preference number: 5 (lower is better) Translates to: GAREAGRGWTKKNRSKVQFLRLF*AFLLRL Trigger: TAAGCGCAAGAGGAAAGCCAAGAAGAGGCGTAAAAA...CTGTACTTTACTCCTATTTTTCTTTGTCCAGCCCCGCCCAGCTTCCCTCGCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | AAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTGCAAGAGGGCATGGCGGCGTTGGCTTTaGGCCAGTAGCCCACCACGG | + |
Preference number: 5 (lower is better) Translates to: KFNSKRIDTNSSRLCKRAWRRWL*ASSPPR Trigger: CCGTGGTGGGCTACTGGCCAAAAGCCAACGCCGCCA...TGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | AACTCTTCTAGACTCTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACCGGCCTCTGTCAGACTaGGGGGCTCCCGTGGACAGC | + |
Preference number: 5 (lower is better) Translates to: NSSRLCKRAEIKSLLFLYRPLSD*GAPVDS Trigger: GCTGTCCACGGGAGCCCCCAAGTCTGACAGAGGCCG...GTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAGAGTCTAGAAGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | CTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACAAGCAGCTACGGATGTCCCAGAGTGGCTCTaGGCTGGGTTTTTGTTGCCA | + |
Preference number: 5 (lower is better) Translates to: LQEGRNKKLVIPLQAATDVPEWL*AGFLLP Trigger: TGGCAACAAAAACCCAGCCAAGAGCCACTCTGGGAC...ATCCGTAGCTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | ATATTCTGCAGCTCTTTGGATATTGAATGGTTTCCTCGGACCTGTCCACAGGGGAGGAAGAGTTTCTCCTaGTTTGTAAACTGCCTCTGC | + |
Preference number: 5 (lower is better) Translates to: IFCSSLDIEWFPRTCPQGRKSFS*FVNCLC Trigger: GCAGAGGCAGTTTACAAACAAGGAGAAACTCTTCCT...CCCCTGTGGACAGGTCCGAGGAAACCATTCAATATCCAAAGAGCTGCAGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | AAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTGCAAGAGGGCAGAGCACAGCTTCAGTTaGCCTTTCACCACCACCACG | + |
Preference number: 5 (lower is better) Translates to: KFNSKRIDTNSSRLCKRAEHSFS*PFTTTT Trigger: CGTGGTGGTGGTGAAAGGCAAACTGAAGCTGTGCTC...TGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | AAGTTCAATTCTAAGAGAATTGACACAAACTCTTCTAGACTCTGCAAGAGGGCATTGCCATTGCTGCTGTaGCTGATGGCCCCAATGCGA | + |
Preference number: 5 (lower is better) Translates to: KFNSKRIDTNSSRLCKRALPLLL*LMAPMR Trigger: TCGCATTGGGGCCATCAGCAACAGCAGCAATGGCAA...TGCCCTCTTGCAGAGTCTAGAAGAGTTTGTGTCAATTCTCTTAGAATTGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | CTGCAAGAGGGCAGAAATAAAAAGCTTGTTATTCCTTTACAAGCAGCTACGGATGGGTTTTTGTTGCCATaGCTGCTGTTGCTGATGGCC | + |
Preference number: 5 (lower is better) Translates to: LQEGRNKKLVIPLQAATDGFLLP*LLLLMA Trigger: GGCCATCAGCAACAGCAGCAATGGCAACAAAAACCC...ATCCGTAGCTGCTTGTAAAGGAATAACAAGCTTTTTATTTCTGCCCTCTTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | ATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTTCATGGAGCACCGCGTaGGCGCAAATGAAGAGGAAG | + |
Preference number: 5 (lower is better) Translates to: IHLVFIERTITIGRKKTTSWSTA*AQMKRK Trigger: CTTCCTCTTCATTTGCGCCAACGCGGTGCTCCATGA...AGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS-3UTR CAA 90 bp | ATACATTTGGTTTTCATCGAACGTACAATCACCATCGGACGTAAAAAGACGACTCTCTTGGCTGGGTTTTaGTTGCCATTGCTGCTGTTG | + |
Preference number: 5 (lower is better) Translates to: IHLVFIERTITIGRKKTTLLAGF*LPLLLL Trigger: CAACAGCAGCAATGGCAACAAAAACCCAGCCAAGAG...AGTCGTCTTTTTACGTCCGATGGTGATTGTACGTTCGATGAAAACCAAATGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | TGGTGGTGCTCTGGCGCCCCCAACTCCCGGTTGGGCTaGAGGGCGCCGGGCTGCTGCCGCCGCTGGCAGCCG | + |
Preference number: 6 (lower is better) Translates to: WWCSGAPNSRLG*RAPGCCRRWQP Trigger: CGGCTGCCAGCGGCGGCAGCAGCCCGGCGCCCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | GGAGCTGGTGGTGCTCTGGCGCCCCCAACTCCCGGTTaGGCTGCAGGGCGCCGGGCTGCTGCCGCCGCTGGC | + |
Preference number: 6 (lower is better) Translates to: GAGGALAPPTPG*AAGRRAAAAAG Trigger: GCCAGCGGCGGCAGCAGCCCGGCGCCCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | ACCTGCGGGTCCTGGGCAAGCGGCCGCCCTGCCCCCTaGCGGTGCGTGCTGTCTTCGCGCCCTCGGGCTCCC | + |
Preference number: 6 (lower is better) Translates to: TCGSWASGRPAP*RCVLSSRPRAP Trigger: GGGAGCCCGAGGGCGCGAAGACAGCACGCACCGCCAGGGGGCAGGGCGGCCGCTTGCCCAGGACCCGCAGGT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CGGGCGACGGTGGAGCCCGATAGTCCGGGAGCCCACTaGTGCTGCGGCGCCGCCAGGCCGCGTACCTGCGGG | + |
Preference number: 6 (lower is better) Translates to: RATVEPDSPGAH*CCGAARPRTCG Trigger: CCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACTATCGGGCTCCACCGTCGCCCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | GCGACGGTGGAGCCCGATAGTCCGGGAGCCCACTGGTaGTGCGGCGCCGCCAGGCCGCGTACCTGCGGGTCC | + |
Preference number: 6 (lower is better) Translates to: ATVEPDSPGAHW*CGAARPRTCGS Trigger: GGACCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACTATCGGGCTCCACCGTCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | ACGGTGGAGCCCGATAGTCCGGGAGCCCACTGGTGCTaGGGCGCCGCCAGGCCGCGTACCTGCGGGTCCTGG | + |
Preference number: 6 (lower is better) Translates to: TVEPDSPGAHWC*GAARPRTCGSW Trigger: CCAGGACCCGCAGGTACGCGGCCTGGCGGCGCCGCAGCACCAGTGGGCTCCCGGACTATCGGGCTCCACCGT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CTCAGCGAGGAGCCCACGAGGGAGCTGGTGGTGCTCTaGCGCCCCCAACTCCCGGTTGGGCTGCAGGGCGCC | + |
Preference number: 6 (lower is better) Translates to: LSEEPTRELVVL*RPQLPVGLQGA Trigger: GGCGCCCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | GGGCGAAGGCGCTCAGCGAGGAGCCCACGAGGGAGCTaGTGGTGCTCTGGCGCCCCCAACTCCCGGTTGGGC | + |
Preference number: 6 (lower is better) Translates to: GRRRSARSPRGS*WCSGAPNSRLG Trigger: GCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAGCGCCTTCGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CTCTGCGCTCGAGGAGGGTGGGGGCTCGGGCGACGGTaGAGCCCGATAGTCCGGGAGCCCACTGGTGCTGCG | + |
Preference number: 6 (lower is better) Translates to: LCARGGWGLGRR*SPIVREPTGAA Trigger: CGCAGCACCAGTGGGCTCCCGGACTATCGGGCTCCACCGTCGCCCGAGCCCCCACCCTCCTCGAGCGCAGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | AGGCGCTCAGCGAGGAGCCCACGAGGGAGCTGGTGGTaGTCTGGCGCCCCCAACTCCCGGTTGGGCTGCAGG | + |
Preference number: 6 (lower is better) Translates to: RRSARSPRGSWW*SGAPNSRLGCR Trigger: CCTGCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAGCGCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | CCCGGGAGCCGCGTTCCCCGGGAGGTCTATGCCAGCTaGAGCTTGCGCCCTCCGAGTCCCCGTCTCTGTCCC | + |
Preference number: 6 (lower is better) Translates to: PGSRVPREVYAS*SLRPPSPRLCP Trigger: GGGACAGAGACGGGGACTCGGAGGGCGCAAGCTGCAGCTGGCATAGACCTCCCGGGGAACGCGGCTCCCGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CGAAGGCGCTCAGCGAGGAGCCCACGAGGGAGCTGGTaGTGCTCTGGCGCCCCCAACTCCCGGTTGGGCTGC | + |
Preference number: 6 (lower is better) Translates to: RRRSARSPRGSW*CSGAPNSRLGC Trigger: GCAGCCCAACCGGGAGTTGGGGGCGCCAGAGCACCACCAGCTCCCTCGTGGGCTCCTCGCTGAGCGCCTTCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CCCGGAGGTCGGTCAGGCTCAGGTCCAGTTCTCCCCTaGGGAGATCCCGGGAGCCGCGTTCCCCGGGAGGTC | + |
Preference number: 6 (lower is better) Translates to: PGGRSGSGPVLP*GDPGSRVPREV Trigger: GACCTCCCGGGGAACGCGGCTCCCGGGATCTCCCCAGGGGAGAACTGGACCTGAGCCTGACCGACCTCCGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS TCA 72 bp | GGAGATGAAGCCAGGTCCGGCGGGGACCCTGCCTCCTaGGTCTCACCGCTGCCTCCGTCCAGCCCAGTGGGG | + |
Preference number: 6 (lower is better) Translates to: GDEARSGGDPAS*VSPLPPSSPVG Trigger: CCCCACTGGGCTGGACGGAGGCAGCGGTGAGACTCAGGAGGCAGGGTCCCCGCCGGACCTGGCTTCATCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | GCCGCGTTCCCCGGGAGGTCTATGCCAGCTGCAGCTTaGGCCCTCCGAGTCCCCGTCTCTGTCCCGATCCCC | + |
Preference number: 6 (lower is better) Translates to: AAFPGRSMPAAA*ALRVPVSVPIP Trigger: GGGGATCGGGACAGAGACGGGGACTCGGAGGGCGCAAGCTGCAGCTGGCATAGACCTCCCGGGGAACGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | GGGAGATCCCGGGAGCCGCGTTCCCCGGGAGGTCTATaGCAGCTGCAGCTTGCGCCCTCCGAGTCCCCGTCT | + |
Preference number: 6 (lower is better) Translates to: GRSREPRSPGGL*QLQLAPSESPS Trigger: AGACGGGGACTCGGAGGGCGCAAGCTGCAGCTGGCATAGACCTCCCGGGGAACGCGGCTCCCGGGATCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 90 bp | GCTGCAGCTTGCGCCCTCCGAGTCCCCGTCTCTGTCCCGATCCCCTaGCAAGGGCAACAGGGCGAAGGCGCTCAGCGAGGAGCCCACGAG | + |
Preference number: 6 (lower is better) Translates to: AAACALRVPVSVPIP*QGQQGEGAQRGAHE Trigger: CTCGTGGGCTCCTCGCTGAGCGCCTTCGCCCTGTTGCCCTTGCAAGGGGATCGGGACAGAGACGGGGACTCGGAGGGCGCAAGCTGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | GCGCCCTCCGAGTCCCCGTCTCTGTCCCGATCCCCTTaGAAGGGCAACAGGGCGAAGGCGCTCAGCGAGGAG | + |
Preference number: 6 (lower is better) Translates to: APSESPSLSRSP*KGNRAKALSEE Trigger: CTCCTCGCTGAGCGCCTTCGCCCTGTTGCCCTTGCAAGGGGATCGGGACAGAGACGGGGACTCGGAGGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | GGAGGCGGACTCCAGGGCCCGCCCACAGAACTGGAGTaGGCACCCCCTGGGGTCCCAGAGTGGCTCTTGGCT | + |
Preference number: 6 (lower is better) Translates to: GGGLQGPPTELE*APPGVPEWLLA Trigger: AGCCAAGAGCCACTCTGGGACCCCAGGGGGTGCCAACTCCAGTTCTGTGGGCGGGCCCTGGAGTCCGCCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | AGCCGCGTTCCCCGGGAGGTCTATGCCAGCTGCAGCTaGCGCCCTCCGAGTCCCCGTCTCTGTCCCGATCCC | + |
Preference number: 6 (lower is better) Translates to: SRVPREVYASCS*RPPSPRLCPDP Trigger: GGGATCGGGACAGAGACGGGGACTCGGAGGGCGCAAGCTGCAGCTGGCATAGACCTCCCGGGGAACGCGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS TCA 72 bp | TGTCAGACTTGGGGGCTCCCGTGGACAGCGCGGAGATaGAGCCAGGTCCGGCGGGGACCCTGCCTCCTGAGT | + |
Preference number: 6 (lower is better) Translates to: CQTWGLPWTARR*SQVRRGPCLLS Trigger: ACTCAGGAGGCAGGGTCCCCGCCGGACCTGGCTTCATCTCCGCGCTGTCCACGGGAGCCCCCAAGTCTGACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | TTGCAGGAGGCGGACTCCAGGGCCCGCCCACAGAACTaGAGTTGGCACCCCCTGGGGTCCCAGAGTGGCTCT | + |
Preference number: 6 (lower is better) Translates to: LQEADSRARPQN*SWHPLGSQSGS Trigger: AGAGCCACTCTGGGACCCCAGGGGGTGCCAACTCCAGTTCTGTGGGCGGGCCCTGGAGTCCGCCTCCTGCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CCTCCTGAGTCTCACCGCTGCCTCCGTCCAGCCCAGTaGGGTGGGGCCATGAACCCCTGGCCAGCATTGCAG | + |
Preference number: 6 (lower is better) Translates to: PPESHRCLRPAQ*GGAMNPWPALQ Trigger: CTGCAATGCTGGCCAGGGGTTCATGGCCCCACCCCACTGGGCTGGACGGAGGCAGCGGTGAGACTCAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CCGCGGCAACTGTGGTCCGGCGATGGCCAGCCCTACTaGAGCGCTCGCGGTAGATGCTGTACACGGCCTCTG | + |
Preference number: 6 (lower is better) Translates to: PRQLWSGDGQPY*SARGRCCTRPL Trigger: CAGAGGCCGTGTACAGCATCTACCGCGAGCGCTCCAGTAGGGCTGGCCATCGCCGGACCACAGTTGCCGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | TGCGCCCTCCGAGTCCCCGTCTCTGTCCCGATCCCCTaGCAAGGGCAACAGGGCGAAGGCGCTCAGCGAGGA | + |
Preference number: 6 (lower is better) Translates to: CALRVPVSVPIP*QGQQGEGAQRG Trigger: TCCTCGCTGAGCGCCTTCGCCCTGTTGCCCTTGCAAGGGGATCGGGACAGAGACGGGGACTCGGAGGGCGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 90 bp | CGCAGAGCCCGCGCAGCTGCCTGGCTTCAGCTCCAGGCCTCGAGATaGCACGTAGCTGAGAAAGCCATTGAGCGGCGCTGCCCCGTGGGA | + |
Preference number: 6 (lower is better) Translates to: RRARAAAWLQLQASR*HVAEKAIERRCPVG Trigger: TCCCACGGGGCAGCGCCGCTCAATGGCTTTCTCAGCTACGTGCAATCTCGAGGCCTGGAGCTGAAGCCAGGCAGCTGCGCGGGCTCTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | GGCGATGGCCAGCCCTACTGGAGCGCTCGCGGTAGATaGTGTACACGGCCTCTGTCAGACTTGGGGGCTCCC | + |
Preference number: 6 (lower is better) Translates to: GDGQPYWSARGR*CTRPLSDLGAP Trigger: GGGAGCCCCCAAGTCTGACAGAGGCCGTGTACAGCATCTACCGCGAGCGCTCCAGTAGGGCTGGCCATCGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | AGCCCCAAAGGCGTCCGCAGAGCCCGCGCAGCTGCCTaGCTTCAGCTCCAGGCCTCGAGATTGCACGTAGCT | + |
Preference number: 6 (lower is better) Translates to: SPKGVRRARAAA*LQLQASRLHVA Trigger: AGCTACGTGCAATCTCGAGGCCTGGAGCTGAAGCCAGGCAGCTGCGCGGGCTCTGCGGACGCCTTTGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 90 bp | TACTGGAGCGCTCGCGGTAGATGCTGTACACGGCCTCTGTCAGACTaGGGGGCTCCCGTGGACAGCGCGGAGATGAAGCCAGGTCCGGCG | + |
Preference number: 6 (lower is better) Translates to: YWSARGRCCTRPLSD*GAPVDSAEMKPGPA Trigger: CGCCGGACCTGGCTTCATCTCCGCGCTGTCCACGGGAGCCCCCAAGTCTGACAGAGGCCGTGTACAGCATCTACCGCGAGCGCTCCAGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CCTCTGCACAGACAGAGGCTCCGCCCTAGTTGGCCCTaGACTGGGACCCTCGGGGGAGCTGTGCTCAGTACT | + |
Preference number: 6 (lower is better) Translates to: PLHRQRLRPSWP*TGTLGGAVLST Trigger: AGTACTGAGCACAGCTCCCCCGAGGGTCCCAGTCCAGGGCCAACTAGGGCGGAGCCTCTGTCTGTGCAGAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | AAACTGCCTCTGCACAGACAGAGGCTCCGCCCTAGTTaGCCCTGGACTGGGACCCTCGGGGGAGCTGTGCTC | + |
Preference number: 6 (lower is better) Translates to: KLPLHRQRLRPS*PWTGTLGGAVL Trigger: GAGCACAGCTCCCCCGAGGGTCCCAGTCCAGGGCCAACTAGGGCGGAGCCTCTGTCTGTGCAGAGGCAGTTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | CCAGGGCCCGCCCACAGAACTGGAGTTGGCACCCCCTaGGGTCCCAGAGTGGCTCTTGGCTGGGTTTTTGTT | + |
Preference number: 6 (lower is better) Translates to: PGPAHRTGVGTP*GPRVALGWVFV Trigger: AACAAAAACCCAGCCAAGAGCCACTCTGGGACCCCAGGGGGTGCCAACTCCAGTTCTGTGGGCGGGCCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | GCTCGCGGTAGATGCTGTACACGGCCTCTGTCAGACTaGGGGGCTCCCGTGGACAGCGCGGAGATGAAGCCA | + |
Preference number: 6 (lower is better) Translates to: ARGRCCTRPLSD*GAPVDSAEMKP Trigger: TGGCTTCATCTCCGCGCTGTCCACGGGAGCCCCCAAGTCTGACAGAGGCCGTGTACAGCATCTACCGCGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | AGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGTGGCTaGAGATCTTGCAGGAGGCGGACTCCAGGGCCCGCC | + |
Preference number: 6 (lower is better) Translates to: RGRGRGRGRGGG*RSCRRRTPGPA Trigger: GGCGGGCCCTGGAGTCCGCCTCCTGCAAGATCTGCAGCCACCTCCTCTTCCTCTTCCTCTTCCTCTTCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | ACTGCTTGCTCCCACCTCTGTTGGCGGCGTTGGCTTTaGGCCAGTAGCCCACCACGGCCATGGCTATGCCCA | + |
Preference number: 6 (lower is better) Translates to: TACSHLCWRRWL*ASSPPRPWLCP Trigger: TGGGCATAGCCATGGCCGTGGTGGGCTACTGGCCAAAAGCCAACGCCGCCAACAGAGGTGGGAGCAAGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | GCAGTAACTGCTTGCTCCCACCTCTGTTGGCGGCGTTaGCTTTTGGCCAGTAGCCCACCACGGCCATGGCTA | + |
Preference number: 6 (lower is better) Translates to: AVTACSHLCWRR*LLASSPPRPWL Trigger: TAGCCATGGCCGTGGTGGGCTACTGGCCAAAAGCCAACGCCGCCAACAGAGGTGGGAGCAAGCAGTTACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | CAATGCGATGGCTACTGCCCACAGGCAGTAACTGCTTaGTCCCACCTCTGTTGGCGGCGTTGGCTTTTGGCC | + |
Preference number: 6 (lower is better) Translates to: QCDGYCPQAVTA*SHLCWRRWLLA Trigger: GGCCAAAAGCCAACGCCGCCAACAGAGGTGGGAGCAAGCAGTTACTGCCTGTGGGCAGTAGCCATCGCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | CCAATGCGATGGCTACTGCCCACAGGCAGTAACTGCTaGCTCCCACCTCTGTTGGCGGCGTTGGCTTTTGGC | + |
Preference number: 6 (lower is better) Translates to: PMRWLLPTGSNC*LPPLLAALAFG Trigger: GCCAAAAGCCAACGCCGCCAACAGAGGTGGGAGCAAGCAGTTACTGCCTGTGGGCAGTAGCCATCGCATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | CTAGTTGGCCCTGGACTGGGACCCTCGGGGGAGCTGTaGTCAGTACTGGGATCTGTAACATCCTCACAGTCT | + |
Preference number: 6 (lower is better) Translates to: LVGPGLGPSGEL*SVLGSVTSSQS Trigger: AGACTGTGAGGATGTTACAGATCCCAGTACTGAGCACAGCTCCCCCGAGGGTCCCAGTCCAGGGCCAACTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 90 bp | GTCCCAGAGTGGCTCTTGGCTGGGTTTTTGTTGCCATTGCTGCTGTaGCTGATGGCCCCAATGCGATGGCTACTGCCCACAGGCAGTAAC | + |
Preference number: 6 (lower is better) Translates to: VPEWLLAGFLLPLLL*LMAPMRWLLPTGSN Trigger: GTTACTGCCTGTGGGCAGTAGCCATCGCATTGGGGCCATCAGCAACAGCAGCAATGGCAACAAAAACCCAGCCAAGAGCCACTCTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CCA 72 bp | TTGCCATTGCTGCTGTTGCTGATGGCCCCAATGCGATaGCTACTGCCCACAGGCAGTAACTGCTTGCTCCCA | + |
Preference number: 6 (lower is better) Translates to: LPLLLLLMAPMR*LLPTGSNCLLP Trigger: TGGGAGCAAGCAGTTACTGCCTGTGGGCAGTAGCCATCGCATTGGGGCCATCAGCAACAGCAGCAATGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | CCTTTCACCACCACCACGTCGTTTTTACGCCTCTTCTaGGCTTTCCTCTTGCGCTTAGGGACCTGGCTGGGG | + |
Preference number: 6 (lower is better) Translates to: PFTTTTSFLRLF*AFLLRLGTWLG Trigger: CCCCAGCCAGGTCCCTAAGCGCAAGAGGAAAGCCAAGAAGAGGCGTAAAAACGACGTGGTGGTGGTGAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178545.3 ENSMUST00000233019.2 |
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CDS TCA 72 bp | TCTTGGCTGGGTTTTTGTTGCCATTGCTGCTGTTGCTaGTGGCCCCAATGCGATGGCTACTGCCCACAGGCA | + |
Preference number: 6 (lower is better) Translates to: SWLGFCCHCCCC*WPQCDGYCPQA Trigger: TGCCTGTGGGCAGTAGCCATCGCATTGGGGCCATCAGCAACAGCAGCAATGGCAACAAAAACCCAGCCAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | TGGCTCTTGGCTGGGTTTTTGTTGCCATTGCTGCTGTaGCTGATGGCCCCAATGCGATGGCTACTGCCCACA | + |
Preference number: 6 (lower is better) Translates to: WLLAGFLLPLLL*LMAPMRWLLPT Trigger: TGTGGGCAGTAGCCATCGCATTGGGGCCATCAGCAACAGCAGCAATGGCAACAAAAACCCAGCCAAGAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 72 bp | GTCCCAGAGTGGCTCTTGGCTGGGTTTTTGTTGCCATaGCTGCTGTTGCTGATGGCCCCAATGCGATGGCTA | + |
Preference number: 6 (lower is better) Translates to: VPEWLLAGFLLP*LLLLMAPMRWL Trigger: TAGCCATCGCATTGGGGCCATCAGCAACAGCAGCAATGGCAACAAAAACCCAGCCAAGAGCCACTCTGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS TCA 72 bp | TGCCCACCAATAGCACTAGGATCCCACAAAGGGCAATaGGCCCCGAGATGGAGCACAGCTTCAGTTTGCCTT | + |
Preference number: 6 (lower is better) Translates to: CPPIALGSHKGQ*APRWSTASVCL Trigger: AAGGCAAACTGAAGCTGTGCTCCATCTCGGGGCTCATTGCCCTTTGTGGGATCCTAGTGCTATTGGTGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 90 bp | ATCCCACAAAGGGCAATGAGCCCCGAGATGGAGCACAGCTTCAGTTaGCCTTTCACCACCACCACGTCGTTTTTACGCCTCTTCTTGGCT | + |
Preference number: 6 (lower is better) Translates to: IPQRAMSPEMEHSFS*PFTTTTSFLRLFLA Trigger: AGCCAAGAAGAGGCGTAAAAACGACGTGGTGGTGGTGAAAGGCAAACTGAAGCTGTGCTCCATCTCGGGGCTCATTGCCCTTTGTGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS CAA 90 bp | TGCTCAGTACTGGGATCTGTAACATCCTCACAGTCTAGCCTTTTCTaGGCCACCACATCCACGACCGACTCTACAGAGGTGTCAGCCTCC | + |
Preference number: 6 (lower is better) Translates to: CSVLGSVTSSQSSLF*ATTSTTDSTEVSAS Trigger: GGAGGCTGACACCTCTGTAGAGTCGGTCGTGGATGTGGTGGCCAAGAAAAGGCTAGACTGTGAGGATGTTACAGATCCCAGTACTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |
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CDS GCA 72 bp | ATGAGGAAGAGTTTCTCCTTGTTTGTAAACTGCCTCTaGACAGACAGAGGCTCCGCCCTAGTTGGCCCTGGA | + |
Preference number: 6 (lower is better) Translates to: MRKSFSLFVNCL*TDRGSALVGPG Trigger: TCCAGGGCCAACTAGGGCGGAGCCTCTGTCTGTGCAGAGGCAGTTTACAAACAAGGAGAAACTCTTCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178545.3 |