Pregenerated sensors for TMEM200A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049420Ensembl transcript IDs: ENSMUST00000066049.7, ENSMUST00000218232.2, ENSMUST00000219338.2, ENSMUST00000219651.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTaGGATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SRVPLQKEDVCVNTG*DSRMLFLQMCPFCS Trigger: GGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR TCA 90 bp | TTTTATAGTAAAATATTGAGCTTAGTCTATTATAACACACAGGCTTaGGCTTCTACGAAGCAGGGTGCCTCTCCAGAAGGAAGATGTCTG | + |
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Preference number: 1 (lower is better) Translates to: FYSKILSLVYYNTQA*ASTKQGASPEGRCL Trigger: CAGACATCTTCCTTCTGGAGAGGCACCCTGCTTCGTAGAAGCTCAAGCCTGTGTGTTATAATAGACTAAGCTCAATATTTTACTATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR TCA 90 bp | AGAAAATCCCATCTTAAGACTGCACTCTCTCTCATTTATGTCTATTaGGTATTAGACCTGAGTTTAACACTTCTTGTCCACACTTTGGTA | + |
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Preference number: 1 (lower is better) Translates to: RKSHLKTALSLIYVY*VLDLSLTLLVHTLV Trigger: TACCAAAGTGTGGACAAGAAGTGTTAAACTCAGGTCTAATACTCAATAGACATAAATGAGAGAGAGTGCAGTCTTAAGATGGGATTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGTGCTCACAGAGGCCAGAAGAGAGTGTTAGATCCCCTGAAACCGGAGTTTCCAAGAACAGCCAATaGTCTCTCTTAACTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: AWCSQRPEESVRSPETGVSKNSQ*SLLTAE Trigger: CTCAGCAGTTAAGAGAGAGCATTGGCTGTTCTTGGA...AACTCCGGTTTCAGGGGATCTAACACTCTCTTCTGGCCTCTGTGAGCACCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTTGTAAGTGCACCATATaGATGCCTGGTGCTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: SRVPLQKEDVCVNTGWDSCKCTI*MPGAHR Trigger: TCTGTGAGCACCAGGCATGCATATGGTGCACTTACA...AGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCTCTTTGCTCCTTAGGTaGCGTTCTCTCTGCGCATGT | + |
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Preference number: 2 (lower is better) Translates to: LQMTVSHHVGAGNKIRILSLLLR*RSLCAC Trigger: ACATGCGCAGAGAGAACGCCACCTAAGGAGCAAAGA...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTAGAGCCACCACGTGGGTaGAGGGAACAAAATCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLEPPRG*REQNQN Trigger: ATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTC...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTGTTCCTTCTAGTGACTaGAATAGGAATGTTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: SRVPLQKEDVCVNTGWDSVPSSD*NRNVHK Trigger: TTTGTGAACATTCCTATTGCAGTCACTAGAAGGAAC...AGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACGAAGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGTTCCTTCTAGTGACTaGAATAGGAATGTTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: STKQGASPEGRCLCKHRLVPSSD*NRNVHK Trigger: TTTGTGAACATTCCTATTGCAGTCACTAGAAGGAAC...CAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCTTCGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR GCA 90 bp | AAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCATTAGACAGTGCACCATATGCATaGCTGGTGCTCACAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KCLGFGKNQQNFLSIPLDSAPYA*LVLTEA Trigger: GGCCTCTGTGAGCACCAGGCATGCATATGGTGCACT...GTCTAATGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCATTAGACCTCTCTCTTAACTGCTaGGACACTCTTCCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: KCLGFGKNQQNFLSIPLDLSLNC*DTLPGP Trigger: GGGTCCTGGAAGAGTGTCTCAGCAGTTAAGAGAGAG...GTCTAATGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR CCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCTACCTCCAAGGAAAATaGTCAGTGGTAAAAATAAAC | + |
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Preference number: 2 (lower is better) Translates to: LQMTVSHHVGAGNKIRILYLQGK*SVVKIN Trigger: GTTTATTTTTACCACTGACCATTTTCCTTGGAGGTA...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCCCGCACTTTCTGTACTaGCTACTTCCCTCTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCPHFLY*LLPSMK Trigger: CTTCATAGAGGGAAGTAGCCAGTACAGAAAGTGCGG...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTACAGATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACACCATTTCTAACACGCTaGCATTTGAGTTTAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: NLQICREKEPIHTAIFITPFLTR*HLSLKG Trigger: GCCTTTTAAACTCAAATGTCAGCGTGTTAGAAATGG...TGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGATCTGTAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCACCGCACTTTCTGTACTaGCTACTTCCCTCTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: VHKCLGFGKNQQNFLSIPPHFLY*LLPSMK Trigger: CTTCATAGAGGGAAGTAGCCAGTACAGAAAGTGCGG...TGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR TCA 90 bp | GACAATTTAAGATATTTGATAACCACAACCCTCAAAACTTGTCCCACCAGGAGACTGGACAACAGCAAGTaGCTAGATGTTAGATGCAAA | + |
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Preference number: 2 (lower is better) Translates to: DNLRYLITTTLKTCPTRRLDNSK*LDVRCK Trigger: TTTGCATCTAACATCTAGTCACTTGCTGTTGTCCAG...TCTCCTGGTGGGACAAGTTTTGAGGGTTGTGGTTATCAAATATCTTAAATTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCATCCAAGAACAGCCAATaGTCTCTCTTAACTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VHKCLGFGKNQQNFLSIPSKNSQ*SLLTAE Trigger: CTCAGCAGTTAAGAGAGAGCATTGGCTGTTCTTGGA...TGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATTACCTCCAAGGAAAATaGTCAGTGGTAAAAATAAAC | + |
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Preference number: 2 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDYLQGK*SVVKIN Trigger: GTTTATTTTTACCACTGACCATTTTCCTTGGAGGTA...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATCCATTTCTAACACGCTaGCATTTGAGTTTAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNPFLTR*HLSLKG Trigger: GCCTTTTAAACTCAAATGTCAGCGTGTTAGAAATGG...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR TCA 90 bp | GACAATTTAAGATATTTGATAACCACAACCCTCAAAACTTGTCCCACCAGGAGAGCCAAGTTCTTAATATaGATGCAGGTATTTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: DNLRYLITTTLKTCPTRRAKFLI*MQVFCI Trigger: GATGCAAAATACCTGCATTCATATTAAGAACTTGGC...TCTCCTGGTGGGACAAGTTTTGAGGGTTGTGGTTATCAAATATCTTAAATTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCAGCCAAGTTCTTAATATaGATGCAGGTATTTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: VHKCLGFGKNQQNFLSIPAKFLI*MQVFCI Trigger: GATGCAAAATACCTGCATTCATATTAAGAACTTGGC...TGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCACACAACCCTCAAAACTaGTCCCACCAGGAGAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: VHKCLGFGKNQQNFLSIPHNPQN*SHQERV Trigger: GACTCTCTCCTGGTGGGACAAGTTTTGAGGGTTGTG...TGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR TCA 72 bp | AAAATATTGAGCTTAGTCTATTATAACACACAGGCTTaGGCTTCTACGAAGCAGGGTGCCTCTCCAGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: KILSLVYYNTQA*ASTKQGASPEG Trigger: TCCTTCTGGAGAGGCACCCTGCTTCGTAGAAGCTCAAGCCTGTGTGTTATAATAGACTAAGCTCAATATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR CCA 72 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTaGGATTCTAGGATGCTATTCTTACAAATGTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PLQKEDVCVNTG*DSRMLFLQMCP Trigger: AGGACACATTTGTAAGAATAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCACCAGGAGAGAGTCTTaGGAGTTAGTGGAAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCTRRES*ELVEGF Trigger: AAAGCCTTCCACTAACTCCAAAGACTCTCTCCTGGT...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR GCA 72 bp | GATTCTGAGGCTCTAAAGTTACAGCTAGTTGCTTTTTaGTATTTATCTCTAAACCATGGACTTCTCCACCAT | + |
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Preference number: 3 (lower is better) Translates to: DSEALKLQLVAF*YLSLNHGLLHH Trigger: ATGGTGGAGAAGTCCATGGTTTAGAGATAAATAGCAAAAAGCAACTAGCTGTAACTTTAGAGCCTCAGAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR TCA 72 bp | CATCTTAAGACTGCACTCTCTCTCATTTATGTCTATTaGGTATTAGACCTGAGTTTAACACTTCTTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: HLKTALSLIYVY*VLDLSLTLLVH Trigger: GTGGACAAGAAGTGTTAAACTCAGGTCTAATACTCAATAGACATAAATGAGAGAGAGTGCAGTCTTAAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | ACTTCTTGTCCACACTTTGGTACCCCGCACTTTCTGTACTGGCTACTTCCCTCTCGGGGCCAGCTCGGGTaGTTCCTTTGTTCTGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: TSCPHFGTPHFLYWLLPSRGQLG*FLCSAC Trigger: GCACGCAGAACAAAGGAAGCACCCGAGCTGGCCCCG...AGAGGGAAGTAGCCAGTACAGAAAGTGCGGGGTACCAAAGTGTGGACAAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGTGCTCACAGAGGCCAGAAGAGAGTGTTAGATCCCCTGAAACCGGAGTTCCAGCACTCCCAGAATaGGGAAAAAGCCAGATGGAG | + |
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Preference number: 4 (lower is better) Translates to: AWCSQRPEESVRSPETGVPALPE*GKSQME Trigger: CTCCATCTGGCTTTTTCCTCATTCTGGGAGTGCTGG...AACTCCGGTTTCAGGGGATCTAACACTCTCTTCTGGCCTCTGTGAGCACCAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCATAGCAACGGGGGCATaGGGTGCCCCAGGCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LQMTVSHHVGAGNKIRILIATGA*GAPGSY Trigger: GTAAGAGCCTGGGGCACCTCATGCCCCCGTTGCTAT...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | GCCTGGTGCTCACAGAGGCCAGAAGAGAGTGTTAGATCCCCTGAAACCGGAGTTTCGGAATGTAGATGCTaGTCAAAGAAGCGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: AWCSQRPEESVRSPETGVSECRC*SKKRTT Trigger: GGTGGTGCGCTTCTTTGAGCAGCATCTACATTCCGA...AACTCCGGTTTCAGGGGATCTAACACTCTCTTCTGGCCTCTGTGAGCACCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTAAGGAGGCCAAGGTGGTaGCAGCCAGCCTGGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLRRPRW*QPAWMH Trigger: GTGCATCCAGGCTGGCTGCCACCACCTTGGCCTCCT...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | AGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTACCAGAGCTCGGCAGTaGGACCACGAGGGAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: SRVPLQKEDVCVNTGWDSTRARQ*DHEGIH Trigger: ATGGATTCCCTCGTGGTCCCACTGCCGAGCTCTGGT...AGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTAGCTGTTCCGCATCCCTaGGAAGGAGGCCAAGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLAVPHP*EGGQGG Trigger: ACCACCTTGGCCTCCTTCTCAGGGATGCGGAACAGC...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | AGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTTATACCCTTTGCTGTTaGTCCGATCCAACCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRVPLQKEDVCVNTGWDSYTLCC*SDPTGA Trigger: GGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATA...AGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTTGTCCACACTTTGGTACCCCGCACTTTCTGTACTGGCTACTTCCCTCTTGTCATCGGTGGCCTTaGCTGGAGGTGGATAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: TSCPHFGTPHFLYWLLPSCHRWP*LEVDKG Trigger: GCCTTTATCCACCTCCAGCCAAGGCCACCGATGACA...AGAGGGAAGTAGCCAGTACAGAAAGTGCGGGGTACCAAAGTGTGGACAAGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCTGGCCTTGTCATCGGTaGCCTTGGCTGGAGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LQMTVSHHVGAGNKIRILWPCHR*PWLEVD Trigger: ATCCACCTCCAGCCAAGGCCACCGATGACAAGGCCA...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | ACTTCTTGTCCACACTTTGGTACCCCGCACTTTCTGTACTGGCTACTTCCCTCTTTCCTTTGTTCTGCGTaGACGGTGAGTGTGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TSCPHFGTPHFLYWLLPSFLCSA*TVSVEG Trigger: TCCTTCCACACTCACCGTGCACGCAGAACAAAGGAA...AGAGGGAAGTAGCCAGTACAGAAAGTGCGGGGTACCAAAGTGTGGACAAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCATCGGTGGCCTTGGCTaGAGGTGGATAAAGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LQMTVSHHVGAGNKIRILIGGLG*RWIKAK Trigger: TTTGGCCTTTATCCACCTCCAGCCAAGGCCACCGAT...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTACCTGCTTCTGCTCCTTaGGTCTCAGAGTGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLPASAP*VSECGC Trigger: ACATCCACACTCTGAGACTCAAGGAGCAGAAGCAGG...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAGAGAGTGAGAAAACAAAAATCTCACGTGATAACCTACAGATCTGCAGGATAGCAACGGGGGCATaGGGTGCCCCAGGCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LSESEKTKISRDNLQICRIATGA*GAPGSY Trigger: GTAAGAGCCTGGGGCACCTCATGCCCCCGTTGCTAT...CCTGCAGATCTGTAGGTTATCACGTGAGATTTTTGTTTTCTCACTCTCTGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCCCATTTGCCTGCTTCTaGTCCTTGAGTCTCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: LQMTVSHHVGAGNKIRILPFACF*SLSLRV Trigger: CACTCTGAGACTCAAGGAGCAGAAGCAGGCAAATGG...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATTGTGTTGCTGAGACCTaGCAGAGTCCTGCCGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDCVAET*QSPAAS Trigger: TGAAGCGGCAGGACTCTGCCAGGTCTCAGCAACACA...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATCCACTTGGGTCTCATTaGTGGACAGCGTGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDPLGSH*WTAWSL Trigger: CAGAGACCACGCTGTCCACCAATGAGACCCAAGTGG...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | AACCTACAGATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACATGGCCTTGTCATCGGTaGCCTTGGCTGGAGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLQICREKEPIHTAIFITWPCHR*PWLEVD Trigger: ATCCACCTCCAGCCAAGGCCACCGATGACAAGGCCA...TGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGATCTGTAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | AACCTACAGATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACAACCAGAGCTCGGCAGTaGGACCACGAGGGAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLQICREKEPIHTAIFITTRARQ*DHEGIH Trigger: ATGGATTCCCTCGTGGTCCCACTGCCGAGCTCTGGT...TGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGATCTGTAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| 3UTR CAA 72 bp | ACAACCCTCAAAACTTGTCCCACCAGGAGAGAGTCTTaGGAGTTAGTGGAAGGCTTTCCAGCACAGGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTLKTCPTRRES*ELVEGFPAQGK Trigger: TTTACCCTGTGCTGGAAAGCCTTCCACTAACTCCAAAGACTCTCTCCTGGTGGGACAAGTTTTGAGGGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATTTGTCGCGGTTCTCATaGAGAATGGCATTGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDLSRFS*RMALAQ Trigger: CTGCGCCAATGCCATTCTTCATGAGAACCGCGACAA...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTAAACACAGGTTGGGATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCGCTGTTCCGCATCCCTaGGAAGGAGGCCAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGWDSRMLFLQMCPFAVPHP*EGGQGG Trigger: ACCACCTTGGCCTCCTTCTCAGGGATGCGGAACAGC...GAAAGGACACATTTGTAAGAATAGCATCCTAGAATCCCAACCTGTGTTTACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR GCA 90 bp | AACCTACAGATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACATATACCCTTTGCTGTTaGTCCGATCCAACCGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NLQICREKEPIHTAIFITYTLCC*SDPTGA Trigger: GGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATA...TGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGATCTGTAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCTTGAGTCTCAGAGTGTaGATGTCGATGACTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQMTVSHHVGAGNKIRILLSLRV*MSMTVE Trigger: CTCCACAGTCATCGACATCCACACTCTGAGACTCAA...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATAGGAGGCCAAGGTGGTaGCAGCCAGCCTGGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNRRPRW*QPAWMH Trigger: GTGCATCCAGGCTGGCTGCCACCACCTTGGCCTCCT...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATATCGGTGGCCTTGGCTaGAGGTGGATAAAGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDIGGLG*RWIKAK Trigger: TTTGGCCTTTATCCACCTCCAGCCAAGGCCACCGAT...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACAGAGTTAACCTGTCATCGGTGGCCTTaGCTGGAGGTGGATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ICREKEPIHTAIFITELTCHRWP*LEVDKG Trigger: GCCTTTATCCACCTCCAGCCAAGGCCACCGATGACA...GGTTAACTCTGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTTATCCCTCATGTGGATaGTTTTGGTTTCTTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVPLQKEDVCVNTGWDSYPSCG*FWFLCR Trigger: GCGACAAAGAAACCAAAATCATCCACATGAGGGATA...AGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACAGAGTTAACCCCTGCTTCTGCTCCTTaGGTCTCAGAGTGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ICREKEPIHTAIFITELTPASAP*VSECGC Trigger: ACATCCACACTCTGAGACTCAAGGAGCAGAAGCAGG...GGTTAACTCTGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | AACCTACAGATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACATGTCTGCGACCTCAGTaGTGCTGTCTATACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLQICREKEPIHTAIFITCLRPQ*CCLYWA Trigger: AGCCCAGTATAGACAGCATCACTGAGGTCGCAGACA...TGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGATCTGTAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTATCTGCGTCAATGAAGTaGTCCTTCTGGGGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLSASMK*SFWGQY Trigger: ATATTGGCCCCAGAAGGAGCACTTCATTGACGCAGA...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR GCA 90 bp | TCAGAAAATCCCATCTTAAGACTGCACTCTCTCTCATTTATGTCTATTGAGTATCGGGGCCAGCTCGGGTaGTTCCTTTGTTCTGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SENPILRLHSLSFMSIEYRGQLG*FLCSAC Trigger: GCACGCAGAACAAAGGAAGCACCCGAGCTGGCCCCG...ATACTCAATAGACATAAATGAGAGAGAGTGCAGTCTTAAGATGGGATTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | GTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCAAGAAGGAGGCCAAGGTaGTGGCAGCCAGCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VHKCLGFGKNQQNFLSIPRRRPR*WQPAWM Trigger: CATCCAGGCTGGCTGCCACCACCTTGGCCTCCTTCT...TGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | CTTTCAGAGAGTGAGAAAACAAAAATCTCACGTGATAACCTACAGATCTGCAGGCCAGCACTCCCAGAATaGGGAAAAAGCCAGATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSESEKTKISRDNLQICRPALPE*GKSQME Trigger: CTCCATCTGGCTTTTTCCTCATTCTGGGAGTGCTGG...CCTGCAGATCTGTAGGTTATCACGTGAGATTTTTGTTTTCTCACTCTCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCTATCCCTCATGTGGATaGTTTTGGTTTCTTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LQMTVSHHVGAGNKIRILYPSCG*FWFLCR Trigger: GCGACAAAGAAACCAAAATCATCCACATGAGGGATA...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGAGAGTGAGAAAACAAAAATCTCACGTGATAACCTACAGATCTGCAGGTGTCTGCGACCTCAGTaGTGCTGTCTATACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSESEKTKISRDNLQICRCLRPQ*CCLYWA Trigger: AGCCCAGTATAGACAGCATCACTGAGGTCGCAGACA...CCTGCAGATCTGTAGGTTATCACGTGAGATTTTTGTTTTCTCACTCTCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTAAACACAGGTTGGGATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCAACGTGACAGCAGGCTaGAAGGACTCACCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVNTGWDSRMLFLQMCPFNVTAG*KDSPEL Trigger: GAGCTCTGGTGAGTCCTTTCAGCCTGCTGTCACGTT...GAAAGGACACATTTGTAAGAATAGCATCCTAGAATCCCAACCTGTGTTTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCAACGTGACAGCAGGCTaGAAGGACTCACCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCNVTAG*KDSPEL Trigger: GAGCTCTGGTGAGTCCTTTCAGCCTGCTGTCACGTT...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTATCTAGGGATTTGGAGTaGGAAGAGAGCAAATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLSRDLE*EESKCK Trigger: CTTGCATTTGCTCTCTTCTCACTCCAAATCCCTAGA...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTATTATCGGAATGTAGATaGTGCTCAAAGAAGCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLLSECR*CSKKRT Trigger: GGTGCGCTTCTTTGAGCAGCATCTACATTCCGATAA...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | AACCTACAGATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACACCATTTGCCTGCTTCTaGTCCTTGAGTCTCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLQICREKEPIHTAIFITPFACF*SLSLRV Trigger: CACTCTGAGACTCAAGGAGCAGAAGCAGGCAAATGG...TGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGATCTGTAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATGTCTCATATACCCTTTaGTGTTGCTCCGATCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDVSYTL*CCSDPT Trigger: GGTTGGATCGGAGCAACAGCAAAGGGTATATGAGAC...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | AACCTACAGATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACATGGTGTCACACTTCTTaGAGCTGCTGGCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLQICREKEPIHTAIFITWCHTS*SCWPCH Trigger: ATGACAAGGCCAGCAGCTCCAAGAAGTGTGACACCA...TGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGATCTGTAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | AAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCATTAGACTGCCGATGCCCATGGTaGACGGGCCAAGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KCLGFGKNQQNFLSIPLDCRCPW*TGQASS Trigger: TGAAGATGCTTGGCCCGTTCACCATGGGCATCGGCA...GTCTAATGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | TCAGAAAATCCCATCTTAAGACTGCACTCTCTCTCATTTATGTCTATTGAGTATTGCCGATGCCCATGGTaGACGGGCCAAGCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SENPILRLHSLSFMSIEYCRCPW*TGQASS Trigger: TGAAGATGCTTGGCCCGTTCACCATGGGCATCGGCA...ATACTCAATAGACATAAATGAGAGAGAGTGCAGTCTTAAGATGGGATTTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR TCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATGAAAGCACTGATGGATaGCGACACAATCGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDESTDG*RHNRFG Trigger: ACCAAATCGATTGTGTCGTCATCCATCAGTGCTTTC...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | ACTTCTTGTCCACACTTTGGTACCCCGCACTTTCTGTACTGGCTACTTCCCTCTGAGGAAAAAGCCAGATaGAGAATAAAGTCGGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSCPHFGTPHFLYWLLPSEEKAR*RIKSDF Trigger: AAAATCCGACTTTATTCTCCATCTGGCTTTTTCCTC...AGAGGGAAGTAGCCAGTACAGAAAGTGCGGGGTACCAAAGTGTGGACAAGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATCCACTTGGGTCTCATTaGTGGACAGCGTGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNPLGSH*WTAWSL Trigger: CAGAGACCACGCTGTCCACCAATGAGACCCAAGTGG...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR GCA 90 bp | GACAATTTAAGATATTTGATAACCACAACCCTCAAAACTTGTCCCACCAGGAGATCGGAATGTAGATGCTaGTCAAAGAAGCGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: DNLRYLITTTLKTCPTRRSECRC*SKKRTT Trigger: GGTGGTGCGCTTCTTTGAGCAGCATCTACATTCCGA...TCTCCTGGTGGGACAAGTTTTGAGGGTTGTGGTTATCAAATATCTTAAATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR GCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATGCCAAACTGTCTTCTTaGAGCTCCCGGAGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNAKLSS*SSRRQE Trigger: CTCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGC...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR GCA 90 bp | GACAATTTAAGATATTTGATAACCACAACCCTCAAAACTTGTCCCACCAGGAGATTCCTTTGTTCTGCGTaGACGGTGAGTGTGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DNLRYLITTTLKTCPTRRFLCSA*TVSVEG Trigger: TCCTTCCACACTCACCGTGCACGCAGAACAAAGGAA...TCTCCTGGTGGGACAAGTTTTGAGGGTTGTGGTTATCAAATATCTTAAATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAAAATCCCATCTTAAGACTGCACTCTCTCTCATTTATGTCTATTGAGTATTGTGTTGCTGAGACCTaGCAGAGTCCTGCCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SENPILRLHSLSFMSIEYCVAET*QSPAAS Trigger: TGAAGCGGCAGGACTCTGCCAGGTCTCAGCAACACA...ATACTCAATAGACATAAATGAGAGAGAGTGCAGTCTTAAGATGGGATTTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | GTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCACTGGGTAGCAGGCAGTaGGCTGAGGTTAATGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHKCLGFGKNQQNFLSIPLGSRQ*AEVNVL Trigger: CAACACATTAACCTCAGCCCACTGCCTGCTACCCAG...TGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATCTGGGTAGCAGGCAGTaGGCTGAGGTTAATGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNLGSRQ*AEVNVL Trigger: CAACACATTAACCTCAGCCCACTGCCTGCTACCCAG...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CCA 90 bp | GACAATTTAAGATATTTGATAACCACAACCCTCAAAACTTGTCCCACCAGGAGATGGTGTCACACTTCTTaGAGCTGCTGGCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNLRYLITTTLKTCPTRRWCHTS*SCWPCH Trigger: ATGACAAGGCCAGCAGCTCCAAGAAGTGTGACACCA...TCTCCTGGTGGGACAAGTTTTGAGGGTTGTGGTTATCAAATATCTTAAATTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGAGAGTGAGAAAACAAAAATCTCACGTGATAACCTACAGATCTGCAGGTCTAGGGATTTGGAGTaGGAAGAGAGCAAATGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSESEKTKISRDNLQICRSRDLE*EESKCK Trigger: CTTGCATTTGCTCTCTTCTCACTCCAAATCCCTAGA...CCTGCAGATCTGTAGGTTATCACGTGAGATTTTTGTTTTCTCACTCTCTGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR GCA 90 bp | AAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCATTAGACGCCAAACTGTCTTCTTaGAGCTCCCGGAGACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLGFGKNQQNFLSIPLDAKLSS*SSRRQE Trigger: CTCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGC...GTCTAATGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCGAAAGCACTGATGGATaGCGACACAATCGATTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCESTDG*RHNRFG Trigger: ACCAAATCGATTGTGTCGTCATCCATCAGTGCTTTC...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATGTTGTTATGAGATCTTaGGATCATGAGAAGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDVVMRS*DHEKFL Trigger: GAGAAACTTCTCATGATCTCAAGATCTCATAACAAC...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR GCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTCTGCGTCAATGAAGTaGTCCTTCTGGGGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNSASMK*SFWGQY Trigger: ATATTGGCCCCAGAAGGAGCACTTCATTGACGCAGA...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTGAGTCTCAGAGTGTaGATGTCGATGACTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNLSLRV*MSMTVE Trigger: CTCCACAGTCATCGACATCCACACTCTGAGACTCAA...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCAATGCAAGGATGTGTTaGAGCCAAACTGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCNARMC*SQTVFL Trigger: CAAGAAGACAGTTTGGCTCCAACACATCCTTGCATT...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| 3UTR CAA 72 bp | CAATTTAAGATATTTGATAACCACAACCCTCAAAACTaGTCCCACCAGGAGAGAGTCTTTGGAGTTAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFKIFDNHNPQN*SHQERVFGVSG Trigger: TCCACTAACTCCAAAGACTCTCTCCTGGTGGGACAAGTTTTGAGGGTTGTGGTTATCAAATATCTTAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCCTAAGTCTAGGGATTTaGAGTGAGAAGAGAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCLSLGI*SEKRAN Trigger: ATTTGCTCTCTTCTCACTCCAAATCCCTAGACTTAG...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCGAGATCTTGAGATCATaGGAAGTTTCTCTTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCEILRS*EVSLYW Trigger: CCAATAAAGAGAAACTTCTCATGATCTCAAGATCTC...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CCA 90 bp | AAATGTTTAGGCTTTGGGAAAAACCAGCAAAATTTCCTGAGTATTCCATTAGACAATGCAAGGATGTGTTaGAGCCAAACTGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCLGFGKNQQNFLSIPLDNARMC*SQTVFL Trigger: CAAGAAGACAGTTTGGCTCCAACACATCCTTGCATT...GTCTAATGGAATACTCAGGAAATTTTGCTGGTTTTTCCCAAAGCCTAAACATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR TCA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATGAGATCTTGAGATCATaGGAAGTTTCTCTTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNEILRS*EVSLYW Trigger: CCAATAAAGAGAAACTTCTCATGATCTCAAGATCTC...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS GCA 90 bp | AGAAGGAGGCCAAGGTGGTGGCAGCCAGCCTGGATGCACAGGGGCTaGCGTTCTGCTTCACTTCTGTGTCTCCCAGCAAGCCTGCGTATA | + |
|
Preference number: 5 (lower is better) Translates to: RRRPRWWQPAWMHRG*RSASLLCLPASLRI Trigger: TATACGCAGGCTTGCTGGGAGACACAGAAGTGAAGCAGAACGGCAGCCCCTGTGCATCCAGGCTGGCTGCCACCACCTTGGCCTCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219651.2 |
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| CDS GCA 90 bp | CTCCGATCCAACCGGGGCCAGCTCGGGTGCTTCCTTTGTTCTGCGTaGACGGTGAGTGTGGAAGGACCTCTGTCTAAGTCTAGGGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRSNRGQLGCFLCSA*TVSVEGPLSKSRDL Trigger: CAAATCCCTAGACTTAGACAGAGGTCCTTCCACACTCACCGTGCACGCAGAACAAAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS GCA 90 bp | ATATACCCTTTGCTGTTGCTCCGATCCAACCGGGGCCAGCTCGGGTaGTTCCTTTGTTCTGCGTGCACGGTGAGTGTGGAAGGACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IYPLLLLRSNRGQLG*FLCSACTVSVEGPL Trigger: CAGAGGTCCTTCCACACTCACCGTGCACGCAGAACAAAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CCA 90 bp | TGCTCAAAGAAGCGCACCACCACACCGCCCTGGTTCCGAACCACTTaGGTCTCATTGGTGGACAGCGTGGTCTCTGCGTCAATGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSKKRTTTPPWFRTT*VSLVDSVVSASMKC Trigger: GCACTTCATTGACGCAGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTTCTTTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS GCA 90 bp | AGAAGAGAGCAAATGCAAGGATGTGTTGGAGCCAAACTGTCTTCTTaGAGCTCCCGGAGACAAGAGCTGTCCAGTCCCGGGGCCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RREQMQGCVGAKLSS*SSRRQELSSPGAQS Trigger: GCTCTGGGCCCCGGGACTGGACAGCTCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGCTCCAACACATCCTTGCATTTGCTCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CCA 90 bp | AGAATAAAGTCGGATTTTCCCACGGACCACCACAACATCTGCTCGTaGGCGCCGTCTGACGGGTTTCTGATCCTGGGTAGCAGGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RIKSDFPTDHHNICS*APSDGFLILGSRQW Trigger: CCACTGCCTGCTACCCAGGATCAGAAACCCGTCAGACGGCGCCCACGAGCAGATGTTGTGGTGGTCCGTGGGAAAATCCGACTTTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS CCA 90 bp | TCGGAATGTAGATGCTGCTCAAAGAAGCGCACCACCACACCGCCCTaGTTCCGAACCACTTGGGTCTCATTGGTGGACAGCGTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SECRCCSKKRTTTPP*FRTTWVSLVDSVVS Trigger: AGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTTCTTTGAGCAGCATCTACATTCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS GCA 90 bp | AGATGGAGAATAAAGTCGGATTTTCCCACGGACCACCACAACATCTaGTCGTGGGCGCCGTCTGACGGGTTTCTGATCCTGGGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWRIKSDFPTDHHNI*SWAPSDGFLILGSR Trigger: CCTGCTACCCAGGATCAGAAACCCGTCAGACGGCGCCCACGAGCAGATGTTGTGGTGGTCCGTGGGAAAATCCGACTTTATTCTCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS GCA 90 bp | CTGGTTCCGAACCACTTGGGTCTCATTGGTGGACAGCGTGGTCTCTaGGTCAATGAAGTGCTCCTTCTGGGGCCAATATCCAAGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVPNHLGLIGGQRGL*VNEVLLLGPISKDC Trigger: GCAGTCCTTGGATATTGGCCCCAGAAGGAGCACTTCATTGACGCAGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS GCA 90 bp | CCCATGGTGAACGGGCCAAGCATCTTCATCTTATCGGAATGTAGATaGTGCTCAAAGAAGCGCACCACCACACCGCCCTGGTTCCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: PMVNGPSIFILSECR*CSKKRTTTPPWFRT Trigger: GGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTTCTTTGAGCAGCATCTACATTCCGATAAGATGAAGATGCTTGGCCCGTTCACCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS GCA 90 bp | CCATCGGGTCCTCTTTGTTCTCCAGTCTCATATACCCTTTGCTGTTaGTCCGATCCAACCGGGGCCAGCTCGGGTGCTTCCTTTGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSGPLCSPVSYTLCC*SDPTGASSGASFVL Trigger: CAGAACAAAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS GCA 90 bp | ACCGATCCATCGGGTCCTCTTTGTTCTCCAGTCTCATATACCCTTTaGTGTTGCTCCGATCCAACCGGGGCCAGCTCGGGTGCTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TDPSGPLCSPVSYTL*CCSDPTGASSGASF Trigger: AAAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGATGGATCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS TCA 90 bp | AAGAGCTGTCCAGTCCCGGGGCCCAGAGCCACAGAGGACTTGTATTaGCTAGATAGGGACTCCCCAACGGAATTGTTCCTTGGGAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: KSCPVPGPRATEDLY*LDRDSPTELFLGSN Trigger: GTTACTCCCAAGGAACAATTCCGTTGGGGAGTCCCTATCTAGTCAATACAAGTCCTCTGTGGCTCTGGGCCCCGGGACTGGACAGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS GCA 90 bp | ATGGTGAACGGGCCAAGCATCTTCATCTTATCGGAATGTAGATGCTaGTCAAAGAAGCGCACCACCACACCGCCCTGGTTCCGAACCACT | + |
|
Preference number: 5 (lower is better) Translates to: MVNGPSIFILSECRC*SKKRTTTPPWFRTT Trigger: AGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTTCTTTGAGCAGCATCTACATTCCGATAAGATGAAGATGCTTGGCCCGTTCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS CCA 90 bp | TCATTGGTGGACAGCGTGGTCTCTGCGTCAATGAAGTGCTCCTTCTaGGGCCAATATCCAAGGACTGCCATGGCGATTCCTATGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLVDSVVSASMKCSF*GQYPRTAMAIPMMD Trigger: GTCCATCATAGGAATCGCCATGGCAGTCCTTGGATATTGGCCCCAGAAGGAGCACTTCATTGACGCAGAGACCACGCTGTCCACCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS-3UTR CAA 90 bp | TCTACGAAGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGCCTGCTTCTGCTCCTaGAGTCTCAGAGTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: STKQGASPEGRCLCKHRLACFCS*SLRVWM Trigger: CATCCACACTCTGAGACTCAAGGAGCAGAAGCAGGC...CAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCTTCGTAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | GCCTGGTGCTCACAGAGGCCAGAAGAGAGTGTTAGATCCCCTGAAACCGGAGTTTCCATCGGGTCCTCTTaGTTCTCCAGTCTCATATAC | + |
|
Preference number: 5 (lower is better) Translates to: AWCSQRPEESVRSPETGVSIGSS*FSSLIY Trigger: GTATATGAGACTGGAGAACAAAGAGGACCCGATGGA...AACTCCGGTTTCAGGGGATCTAACACTCTCTTCTGGCCTCTGTGAGCACCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTTGTCCACACTTTGGTACCCCGCACTTTCTGTACTGGCTACTTCCCTCTTTGGTGTCACACTTCTaGGAGCTGCTGGCCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSCPHFGTPHFLYWLLPSLVSHF*ELLALS Trigger: TGACAAGGCCAGCAGCTCCAAGAAGTGTGACACCAA...AGAGGGAAGTAGCCAGTACAGAAAGTGCGGGGTACCAAAGTGTGGACAAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCAGCCAAACTGTCTTCTaGCAGCTCCCGGAGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQMTVSHHVGAGNKIRILSQTVF*QLPETR Trigger: TCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGCT...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS GCA 90 bp | GAGGGAATCCATGGAAAGATTCCTGGACCTAGTTTTGAGGTTGTCTaGGACCTCAGTGATGCTGTCTATACTGGGCTCGTCAATGACACA | + |
|
Preference number: 5 (lower is better) Translates to: EGIHGKIPGPSFEVV*DLSDAVYTGLVNDT Trigger: TGTGTCATTGACGAGCCCAGTATAGACAGCATCACTGAGGTCGCAGACAACCTCAAAACTAGGTCCAGGAATCTTTCCATGGATTCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTTGTCCACACTTTGGTACCCCGCACTTTCTGTACTGGCTACTTCCCTCTTCCATCGGGTCCTCTTaGTTCTCCAGTCTCATATAC | + |
|
Preference number: 5 (lower is better) Translates to: TSCPHFGTPHFLYWLLPSSIGSS*FSSLIY Trigger: GTATATGAGACTGGAGAACAAAGAGGACCCGATGGA...AGAGGGAAGTAGCCAGTACAGAAAGTGCGGGGTACCAAAGTGTGGACAAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS TCA 90 bp | ACGGTGAGTGTGGAAGGACCTCTGTCTAAGTCTAGGGATTTGGAGTaGGAAGAGAGCAAATGCAAGGATGTGTTGGAGCCAAACTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVSVEGPLSKSRDLE*EESKCKDVLEPNCL Trigger: AAGACAGTTTGGCTCCAACACATCCTTGCATTTGCTCTCTTCTCACTCCAAATCCCTAGACTTAGACAGAGGTCCTTCCACACTCACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATGCTGAGGTTAATGTGTaGCTGAGACCTGGCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDAEVNV*LRPGRV Trigger: GACTCTGCCAGGTCTCAGCAACACATTAACCTCAGC...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | TTACAGATGACTGTGAGCCACCACGTGGGTGCAGGGAACAAAATCAGAATTCTCGACGACACAATCGATTaGGTGTCACACTTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQMTVSHHVGAGNKIRILDDTID*VSHFLE Trigger: CTCCAAGAAGTGTGACACCAAATCGATTGTGTCGTC...GAGAATTCTGATTTTGTTCCCTGCACCCACGTGGTGGCTCACAGTCATCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | ATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACAGAGTTAACCAGCCAAACTGTCTTCTaGCAGCTCCCGGAGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICREKEPIHTAIFITELTSQTVF*QLPETR Trigger: TCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGCT...GGTTAACTCTGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | GACAATTTAAGATATTTGATAACCACAACCCTCAAAACTTGTCCCACCAGGAGAGCCTGCTTCTGCTCCTaGAGTCTCAGAGTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: DNLRYLITTTLKTCPTRRACFCS*SLRVWM Trigger: CATCCACACTCTGAGACTCAAGGAGCAGAAGCAGGC...TCTCCTGGTGGGACAAGTTTTGAGGGTTGTGGTTATCAAATATCTTAAATTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | ACTTCTTGTCCACACTTTGGTACCCCGCACTTTCTGTACTGGCTACTTCCCTCTGTTCCTCGCTTCAAGTaGTTACTCAAAAACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TSCPHFGTPHFLYWLLPSVPRFK*LLKNSS Trigger: TGATGAGTTTTTGAGTAACAACTTGAAGCGAGGAAC...AGAGGGAAGTAGCCAGTACAGAAAGTGCGGGGTACCAAAGTGTGGACAAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | TCTACGAAGCAGGGTGCCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGTTCCTCGCTTCAAGTaGTTACTCAAAAACTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: STKQGASPEGRCLCKHRLVPRFK*LLKNSS Trigger: TGATGAGTTTTTGAGTAACAACTTGAAGCGAGGAAC...CAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGGCACCCTGCTTCGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCTTGGTGTCACACTTCTaGGAGCTGCTGGCCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCLVSHF*ELLALS Trigger: TGACAAGGCCAGCAGCTCCAAGAAGTGTGACACCAA...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | CCTCTCCAGAAGGAAGATGTCTGTGTAAACACAGGTTGGGATTCTAGGATGCTAAAATGCAAGGATGTGTaGGAGCCAAACTGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLQKEDVCVNTGWDSRMLKCKDV*EPNCLL Trigger: AAGAAGACAGTTTGGCTCCAACACATCCTTGCATTT...TAGCATCCTAGAATCCCAACCTGTGTTTACACAGACATCTTCCTTCTGGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS-3UTR CAA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATGCTGAGGTTAATGTGTaGCTGAGACCTGGCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNAEVNV*LRPGRV Trigger: GACTCTGCCAGGTCTCAGCAACACATTAACCTCAGC...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAATCCCATCTTAAGACTGCACTCTCTCTCATTTATGTCTATTGAGTATCTGGTTCCGAACCACTaGGGTCTCATTGGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SENPILRLHSLSFMSIEYLVPNH*GLIGGQ Trigger: CTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAG...ATACTCAATAGACATAAATGAGAGAGAGTGCAGTCTTAAGATGGGATTTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTGGAAGGCTTTCCAGCACAGGGTAAATCACAAGGCAGTTTATCAAGCGATAAATGCAAGGATGTGTaGGAGCCAAACTGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVEGFPAQGKSQGSLSSDKCKDV*EPNCLL Trigger: AAGAAGACAGTTTGGCTCCAACACATCCTTGCATTT...ATCGCTTGATAAACTGCCTTGTGATTTACCCTGTGCTGGAAAGCCTTCCACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAAAATCCCATCTTAAGACTGCACTCTCTCTCATTTATGTCTATTGAGTATATATACCCTTTGCTGTaGCTCCGATCCAACCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SENPILRLHSLSFMSIEYIYPLL*LRSNRG Trigger: GCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATAT...ATACTCAATAGACATAAATGAGAGAGAGTGCAGTCTTAAGATGGGATTTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTAAACACAGGTTGGGATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCAGTCTCATATACCCTTaGCTGTTGCTCCGATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CVNTGWDSRMLFLQMCPFSLIYP*LLLRSN Trigger: GTTGGATCGGAGCAACAGCAAAGGGTATATGAGACT...GAAAGGACACATTTGTAAGAATAGCATCCTAGAATCCCAACCTGTGTTTACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATGACGACACAATCGATTaGGTGTCACACTTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNDDTID*VSHFLE Trigger: CTCCAAGAAGTGTGACACCAAATCGATTGTGTCGTC...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGCAGGGAAAAGGAACCCATACATACAGCCATCTTCATTACAGAGTTAACCACACAGTTATTAAGCTaGATCACAGGTAGCGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ICREKEPIHTAIFITELTTQLLS*ITGSVK Trigger: TTTCACGCTACCTGTGATCAAGCTTAATAACTGTGT...GGTTAACTCTGTAATGAAGATGGCTGTATGTATGGGTTCCTTTTCCCTGCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCAATAGGAATGTTCACAAATGTTTAGGCTTTGGGAAAAACCAGCAAAATAGTCTCATATACCCTTaGCTGTTGCTCCGATCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DCNRNVHKCLGFGKNQQNSLIYP*LLLRSN Trigger: GTTGGATCGGAGCAACAGCAAAGGGTATATGAGACT...ATTTTGCTGGTTTTTCCCAAAGCCTAAACATTTGTGAACATTCCTATTGCAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTAGGATGCTATTCTTACAAATGTGTCCTTTCTGTTCCTTCTAGTGACTGCACACAGTTATTAAGCTaGATCACAGGTAGCGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILGCYSYKCVLSVPSSDCTQLLS*ITGSVK Trigger: TTTCACGCTACCTGTGATCAAGCTTAATAACTGTGT...GCAGTCACTAGAAGGAACAGAAAGGACACATTTGTAAGAATAGCATCCTAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS GCA 72 bp | CCAAGGTGGTGGCAGCCAGCCTGGATGCACAGGGGCTaGCGTTCTGCTTCACTTCTGTGTCTCCCAGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRWWQPAWMHRG*RSASLLCLPAS Trigger: GCTTGCTGGGAGACACAGAAGTGAAGCAGAACGGCAGCCCCTGTGCATCCAGGCTGGCTGCCACCACCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219651.2 |
||
| CDS CCA 72 bp | TCCCTGAGAAGGAGGCCAAGGTGGTGGCAGCCAGCCTaGATGCACAGGGGCTGCCGTTCTGCTTCACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRRRPRWWQPA*MHRGCRSASLL Trigger: CAGAAGTGAAGCAGAACGGCAGCCCCTGTGCATCCAGGCTGGCTGCCACCACCTTGGCCTCCTTCTCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219651.2 |
||
| CDS CAA 72 bp | GAAGCGCACCACCACACCGCCCTGGTTCCGAACCACTaGGGTCTCATTGGTGGACAGCGTGGTCTCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: EAHHHTALVPNH*GLIGGQRGLCV Trigger: GACGCAGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS CAA 72 bp | GCTCCGATCCAACCGGGGCCAGCTCGGGTGCTTCCTTaGTTCTGCGTGCACGGTGAGTGTGGAAGGACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: APIQPGPARVLP*FCVHGECGRTS Trigger: AGAGGTCCTTCCACACTCACCGTGCACGCAGAACAAAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS TCA 72 bp | TGGGTAGCAGGCAGTGGGCTGAGGTTAATGTGTTGCTaGGACCTGGCAGAGTCCTGCCGCTTCAAGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: WVAGSGLRLMCC*DLAESCRFKAA Trigger: GGCGGCCTTGAAGCGGCAGGACTCTGCCAGGTCTCAGCAACACATTAACCTCAGCCCACTGCCTGCTACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS CCA 72 bp | AAGCGCACCACCACACCGCCCTGGTTCCGAACCACTTaGGTCTCATTGGTGGACAGCGTGGTCTCTGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: KRTTTPPWFRTT*VSLVDSVVSAS Trigger: TGACGCAGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS GCA 72 bp | TTGCTGTTGCTCCGATCCAACCGGGGCCAGCTCGGGTaGTTCCTTTGTTCTGCGTGCACGGTGAGTGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLRSNRGQLG*FLCSACTVSVE Trigger: TTCCACACTCACCGTGCACGCAGAACAAAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CCA 72 bp | TCGGATTTTCCCACGGACCACCACAACATCTGCTCGTaGGCGCCGTCTGACGGGTTTCTGATCCTGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SDFPTDHHNICS*APSDGFLILGS Trigger: GCTACCCAGGATCAGAAACCCGTCAGACGGCGCCCACGAGCAGATGTTGTGGTGGTCCGTGGGAAAATCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS CAA 90 bp | AAGCGCACCACCACACCGCCCTGGTTCCGAACCACTTGGGTCTCATaGGTGGACAGCGTGGTCTCTGCGTCAATGAAGTGCTCCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KRTTTPPWFRTTWVS*VDSVVSASMKCSFW Trigger: CCAGAAGGAGCACTTCATTGACGCAGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS CAA 90 bp | CTGCTCAAAGAAGCGCACCACCACACCGCCCTGGTTCCGAACCACTaGGGTCTCATTGGTGGACAGCGTGGTCTCTGCGTCAATGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLKEAHHHTALVPNH*GLIGGQRGLCVNEV Trigger: CACTTCATTGACGCAGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTTCTTTGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS TCA 72 bp | ACAACATCTGCTCGTGGGCGCCGTCTGACGGGTTTCTaGTCCTGGGTAGCAGGCAGTGGGCTGAGGTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: TTSARGRRLTGF*SWVAGSGLRLM Trigger: CATTAACCTCAGCCCACTGCCTGCTACCCAGGATCAGAAACCCGTCAGACGGCGCCCACGAGCAGATGTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS GCA 72 bp | AACCGGGGCCAGCTCGGGTGCTTCCTTTGTTCTGCGTaGACGGTGAGTGTGGAAGGACCTCTGTCTAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NRGQLGCFLCSA*TVSVEGPLSKS Trigger: AGACTTAGACAGAGGTCCTTCCACACTCACCGTGCACGCAGAACAAAGGAAGCACCCGAGCTGGCCCCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CCA 72 bp | AGATGCTGCTCAAAGAAGCGCACCACCACACCGCCCTaGTTCCGAACCACTTGGGTCTCATTGGTGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCCSKKRTTTPP*FRTTWVSLVDS Trigger: GCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGTGGTGCGCTTCTTTGAGCAGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS CAA 72 bp | ACCACACCGCCCTGGTTCCGAACCACTTGGGTCTCATaGGTGGACAGCGTGGTCTCTGCGTCAATGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TTPPWFRTTWVS*VDSVVSASMKC Trigger: GCACTTCATTGACGCAGAGACCACGCTGTCCACCAATGAGACCCAAGTGGTTCGGAACCAGGGCGGTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS CAA 90 bp | GAGAAGAGAGCAAATGCAAGGATGTGTTGGAGCCAAACTGTCTTCTaGCAGCTCCCGGAGACAAGAGCTGTCCAGTCCCGGGGCCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EKRANARMCWSQTVF*QLPETRAVQSRGPE Trigger: CTCTGGGCCCCGGGACTGGACAGCTCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGCTCCAACACATCCTTGCATTTGCTCTCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS GCA 72 bp | CCTCTTTGTTCTCCAGTCTCATATACCCTTTGCTGTTaGTCCGATCCAACCGGGGCCAGCTCGGGTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLCSPVSYTLCC*SDPTGASSGAS Trigger: GGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS GCA 72 bp | TCGGGTCCTCTTTGTTCTCCAGTCTCATATACCCTTTaGTGTTGCTCCGATCCAACCGGGGCCAGCTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGPLCSPVSYTL*CCSDPTGASSG Trigger: ACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CCA 72 bp | GACAGCAGGCTGAAAGGACTCACCAGAGCTCGGCAGTaGGACCACGAGGGAATCCATGGAAAGATTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: DSRLKGLTRARQ*DHEGIHGKIPG Trigger: TCCAGGAATCTTTCCATGGATTCCCTCGTGGTCCCACTGCCGAGCTCTGGTGAGTCCTTTCAGCCTGCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CAA 72 bp | ATCGGGTCCTCTTTGTTCTCCAGTCTCATATACCCTTaGCTGTTGCTCCGATCCAACCGGGGCCAGCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: IGSSLFSSLIYP*LLLRSNRGQLG Trigger: CCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CAA 90 bp | AACCGATCCATCGGGTCCTCTTTGTTCTCCAGTCTCATATACCCTTaGCTGTTGCTCCGATCCAACCGGGGCCAGCTCGGGTGCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: NRSIGSSLFSSLIYP*LLLRSNRGQLGCFL Trigger: AAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGATGGATCGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS TCA 72 bp | GGGTCTCATTGGTGGACAGCGTGGTCTCTGCGTCAATaGAGTGCTCCTTCTGGGGCCAATATCCAAGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: GSHWWTAWSLRQ*SAPSGANIQGL Trigger: CAGTCCTTGGATATTGGCCCCAGAAGGAGCACTTCATTGACGCAGAGACCACGCTGTCCACCAATGAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS TCA 72 bp | CCAGTCCCGGGGCCCAGAGCCACAGAGGACTTGTATTaGCTAGATAGGGACTCCCCAACGGAATTGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PVPGPRATEDLY*LDRDSPTELFL Trigger: AAGGAACAATTCCGTTGGGGAGTCCCTATCTAGTCAATACAAGTCCTCTGTGGCTCTGGGCCCCGGGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS GCA 72 bp | ATAAAGTCGGATTTTCCCACGGACCACCACAACATCTaGTCGTGGGCGCCGTCTGACGGGTTTCTGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IKSDFPTDHHNI*SWAPSDGFLIL Trigger: CAGGATCAGAAACCCGTCAGACGGCGCCCACGAGCAGATGTTGTGGTGGTCCGTGGGAAAATCCGACTTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS GCA 72 bp | GTGTCTCCCAGCAAGCCTGCGTATAGGCCATTTGCCTaGTTCTGCTCCTTGAGTCTCAGAGTGTGGATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VSPSKPAYRPFA*FCSLSLRVWMS Trigger: CGACATCCACACTCTGAGACTCAAGGAGCAGAAGCAGGCAAATGGCCTATACGCAGGCTTGCTGGGAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219651.2 |
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| CDS GCA 72 bp | CAAATGCAAGGATGTGTTGGAGCCAAACTGTCTTCTTaGAGCTCCCGGAGACAAGAGCTGTCCAGTCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QMQGCVGAKLSS*SSRRQELSSPG Trigger: CCCGGGACTGGACAGCTCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGCTCCAACACATCCTTGCATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CCA 72 bp | GACAGCGTGGTCTCTGCGTCAATGAAGTGCTCCTTCTaGGGCCAATATCCAAGGACTGCCATGGCGATTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DSVVSASMKCSF*GQYPRTAMAIP Trigger: AGGAATCGCCATGGCAGTCCTTGGATATTGGCCCCAGAAGGAGCACTTCATTGACGCAGAGACCACGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
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| CDS CAA 72 bp | GCAAATGCAAGGATGTGTTGGAGCCAAACTGTCTTCTaGCAGCTCCCGGAGACAAGAGCTGTCCAGTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ANARMCWSQTVF*QLPETRAVQSR Trigger: CCGGGACTGGACAGCTCTTGTCTCCGGGAGCTGCAAGAAGACAGTTTGGCTCCAACACATCCTTGCATTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 72 bp | TCCTCTTTGTTCTCCAGTCTCATATACCCTTTGCTGTaGCTCCGATCCAACCGGGGCCAGCTCGGGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSLFSSLIYPLL*LRSNRGQLGCF Trigger: GAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 90 bp | TCCATCGGGTCCTCTTTGTTCTCCAGTCTCATATACCCTTTGCTGTaGCTCCGATCCAACCGGGGCCAGCTCGGGTGCTTCCTTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SIGSSLFSSLIYPLL*LRSNRGQLGCFLCS Trigger: AGAACAAAGGAAGCACCCGAGCTGGCCCCGGTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS GCA 72 bp | TCATTGGTGGACAGCGTGGTCTCTGCGTCAATGAAGTaGTCCTTCTGGGGCCAATATCCAAGGACTGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SLVDSVVSASMK*SFWGQYPRTAM Trigger: CATGGCAGTCCTTGGATATTGGCCCCAGAAGGAGCACTTCATTGACGCAGAGACCACGCTGTCCACCAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS GCA 72 bp | AACGGGCCAAGCATCTTCATCTTATCGGAATGTAGATaGTGCTCAAAGAAGCGCACCACCACACCGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NGPSIFILSECR*CSKKRTTTPPW Trigger: CCAGGGCGGTGTGGTGGTGCGCTTCTTTGAGCAGCATCTACATTCCGATAAGATGAAGATGCTTGGCCCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219338.2 ENSMUST00000219651.2 |
||
| CDS GCA 72 bp | CCCAGCAAGCCTGCGTATAGGCCATTTGCCTGCTTCTaGTCCTTGAGTCTCAGAGTGTGGATGTCGATGACT | + |
|
Preference number: 6 (lower is better) Translates to: PSKPAYRPFACF*SLSLRVWMSMT Trigger: AGTCATCGACATCCACACTCTGAGACTCAAGGAGCAGAAGCAGGCAAATGGCCTATACGCAGGCTTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 ENSMUST00000219651.2 |
||
| CDS CAA 90 bp | AAAGCACTGATGGATGACGACACAATCGATTTGGTGTCACACTTCTaGGAGCTGCTGGCCTTGTCATCGGTGGCCTTGGCTGGAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KALMDDDTIDLVSHF*ELLALSSVALAGGG Trigger: TCCACCTCCAGCCAAGGCCACCGATGACAAGGCCAGCAGCTCCAAGAAGTGTGACACCAAATCGATTGTGTCGTCATCCATCAGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS TCA 72 bp | AGACAGAGACTGCACTGTCAGATAGCAACGGGGGCATaGGGTGCCCCAGGCTCTTACTTTCAGTCAACATCA | + |
|
Preference number: 6 (lower is better) Translates to: RQRLHCQIATGA*GAPGSYFQSTS Trigger: TGATGTTGACTGAAAGTAAGAGCCTGGGGCACCTCATGCCCCCGTTGCTATCTGACAGTGCAGTCTCTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 90 bp | ATCACAGGTAGCGTGAAAGCACTGATGGATGACGACACAATCGATTaGGTGTCACACTTCTTGGAGCTGCTGGCCTTGTCATCGGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ITGSVKALMDDDTID*VSHFLELLALSSVA Trigger: GGCCACCGATGACAAGGCCAGCAGCTCCAAGAAGTGTGACACCAAATCGATTGTGTCGTCATCCATCAGTGCTTTCACGCTACCTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 90 bp | AGTGGGACCACGAGGGAATCCATGGAAAGATTCCTGGACCTAGTTTaGAGGTTGTCTGCGACCTCAGTGATGCTGTCTATACTGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SGTTRESMERFLDLV*RLSATSVMLSILGS Trigger: CGAGCCCAGTATAGACAGCATCACTGAGGTCGCAGACAACCTCAAAACTAGGTCCAGGAATCTTTCCATGGATTCCCTCGTGGTCCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 72 bp | GTTTGGGGAACGAGCAACCGATCCATCGGGTCCTCTTaGTTCTCCAGTCTCATATACCCTTTGCTGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VWGTSNRSIGSS*FSSLIYPLLLL Trigger: GAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGATGGATCGGTTGCTCGTTCCCCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 90 bp | ACCACGAGGGAATCCATGGAAAGATTCCTGGACCTAGTTTTGAGGTaGTCTGCGACCTCAGTGATGCTGTCTATACTGGGCTCGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: TTRESMERFLDLVLR*SATSVMLSILGSSM Trigger: CATTGACGAGCCCAGTATAGACAGCATCACTGAGGTCGCAGACAACCTCAAAACTAGGTCCAGGAATCTTTCCATGGATTCCCTCGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 90 bp | TTGATTGCTGTTTGGGGAACGAGCAACCGATCCATCGGGTCCTCTTaGTTCTCCAGTCTCATATACCCTTTGCTGTTGCTCCGATCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LIAVWGTSNRSIGSS*FSSLIYPLLLLRSN Trigger: GTTGGATCGGAGCAACAGCAAAGGGTATATGAGACTGGAGAACAAAGAGGACCCGATGGATCGGTTGCTCGTTCCCCAAACAGCAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS GCA 72 bp | CATGGAAAGATTCCTGGACCTAGTTTTGAGGTTGTCTaGGACCTCAGTGATGCTGTCTATACTGGGCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: HGKIPGPSFEVV*DLSDAVYTGLV Trigger: GACGAGCCCAGTATAGACAGCATCACTGAGGTCGCAGACAACCTCAAAACTAGGTCCAGGAATCTTTCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 72 bp | AGCGTGAAAGCACTGATGGATGACGACACAATCGATTaGGTGTCACACTTCTTGGAGCTGCTGGCCTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SVKALMDDDTID*VSHFLELLALS Trigger: TGACAAGGCCAGCAGCTCCAAGAAGTGTGACACCAAATCGATTGTGTCGTCATCCATCAGTGCTTTCACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
||
| CDS CAA 72 bp | GAATCCATGGAAAGATTCCTGGACCTAGTTTTGAGGTaGTCTGCGACCTCAGTGATGCTGTCTATACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ESMERFLDLVLR*SATSVMLSILG Trigger: GCCCAGTATAGACAGCATCACTGAGGTCGCAGACAACCTCAAAACTAGGTCCAGGAATCTTTCCATGGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CAA 72 bp | ACGAGGGAATCCATGGAAAGATTCCTGGACCTAGTTTaGAGGTTGTCTGCGACCTCAGTGATGCTGTCTATA | + |
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Preference number: 6 (lower is better) Translates to: TRESMERFLDLV*RLSATSVMLSI Trigger: TATAGACAGCATCACTGAGGTCGCAGACAACCTCAAAACTAGGTCCAGGAATCTTTCCATGGATTCCCTCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CAA 90 bp | GTGATGCTGTCTATACTGGGCTCGTCAATGACACAGTTATTAAGCTaGATCACAGGTAGCGTGAAAGCACTGATGGATGACGACACAATC | + |
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Preference number: 6 (lower is better) Translates to: VMLSILGSSMTQLLS*ITGSVKALMDDDTI Trigger: GATTGTGTCGTCATCCATCAGTGCTTTCACGCTACCTGTGATCAAGCTTAATAACTGTGTCATTGACGAGCCCAGTATAGACAGCATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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| CDS CAA 72 bp | TCTATACTGGGCTCGTCAATGACACAGTTATTAAGCTaGATCACAGGTAGCGTGAAAGCACTGATGGATGAC | + |
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Preference number: 6 (lower is better) Translates to: SILGSSMTQLLS*ITGSVKALMDD Trigger: GTCATCCATCAGTGCTTTCACGCTACCTGTGATCAAGCTTAATAACTGTGTCATTGACGAGCCCAGTATAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066049.7 ENSMUST00000218232.2 |
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