RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM199 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051232

Ensembl transcript IDs: ENSMUST00000052566.8

Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAATTCACAGCAGACAGGCTCCCCAAAGAACCTGACCTGGTCCTCTaGCTAACTGGAGCTGAATACAAAGAGCATTGTGGGTTGACTGAG +
Preference number: 1 (lower is better)
Translates to: KFTADRLPKEPDLVL*LTGAEYKEHCGLTE
Trigger: CTCAGTCAACCCACAATGCTCTTTGTATTCAGCTCCAGTTAGTCAGAGGACCAGGTCAGGTTCTTTGGGGAGCCTGTCTGCTGTGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR CCA 90 bp ACAGAGTTAGCTGCCTGGCTTCTAGTTCCACCATCCTGTATCAACTaGTTTTTCTTCTATGGATGCCTGTCTTCTGACTATTGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: TELAAWLLVPPSCIN*FFFYGCLSSDYWAS
Trigger: ACTGGCCCAATAGTCAGAAGACAGGCATCCATAGAAGAAAAACCAGTTGATACAGGATGGTGGAACTAGAAGCCAGGCAGCTAACTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR TCA 90 bp ACCATCCTGTATCAACTGGTTTTTCTTCTATGGATGCCTGTCTTCTaGCTATTGGGCCAGTTCAAGGCAGTAGAGTCCATTTGGGGTAAA +
Preference number: 1 (lower is better)
Translates to: TILYQLVFLLWMPVF*LLGQFKAVESIWGK
Trigger: TTTACCCCAAATGGACTCTACTGCCTTGAACTGGCCCAATAGTCAGAAGACAGGCATCCATAGAAGAAAAACCAGTTGATACAGGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR TCA 90 bp GATCATCTGATTTCTCTCAGGCCATATAAGCTCTGGAAAATGGCCTaGTACCATTTCCTTTTCTACAGAGTTAGCTGCCTGGCTTCTAGT +
Preference number: 1 (lower is better)
Translates to: DHLISLRPYKLWKMA*YHFLFYRVSCLASS
Trigger: ACTAGAAGCCAGGCAGCTAACTCTGTAGAAAAGGAAATGGTATCAGGCCATTTTCCAGAGCTTATATGGCCTGAGAGAAATCAGATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR-3UTR TCA 90 bp TCTACTCCTCCCCAAGGAAATTCACAGCAGACAGGCTCCCCAAAGAACCTGACCTTGACTGAGAGTCTGTaGTGGGCAATGGAGTCTGGG +
Preference number: 2 (lower is better)
Translates to: STPPQGNSQQTGSPKNLTLTESL*WAMESG
Trigger: CCCAGACTCCATTGCCCATCACAGACTCTCAGTCAA...GGTCAGGTTCTTTGGGGAGCCTGTCTGCTGTGAATTTCCTTGGGGAGGAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR-3UTR TCA 90 bp ACACTGTCTGAATCTCCTCTACTCCTCCCCAAGGAAATTCACAGCAGACAGGCTGCATTGTGGGTTGACTaGGAGTCTGTGATGGGCAAT +
Preference number: 2 (lower is better)
Translates to: TLSESPLLLPKEIHSRQAALWVD*ESVMGN
Trigger: ATTGCCCATCACAGACTCTCAGTCAACCCACAATGC...AGCCTGTCTGCTGTGAATTTCCTTGGGGAGGAGTAGAGGAGATTCAGACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR-3UTR TCA 90 bp GTTAGCTGCCTGGCTTCTAGTTCCACCATCCTGTATCAACTGGTTTTTCTTCTACCTGACCTGGTCCTCTaGCTAACTGGAGCTGAATAC +
Preference number: 2 (lower is better)
Translates to: VSCLASSSTILYQLVFLLPDLVL*LTGAEY
Trigger: GTATTCAGCTCCAGTTAGTCAGAGGACCAGGTCAGG...TAGAAGAAAAACCAGTTGATACAGGATGGTGGAACTAGAAGCCAGGCAGCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR-3UTR CCA 90 bp TCAACTGGTTTTTCTTCTATGGATGCCTGTCTTCTGACTATTGGGCCAGTTCAAATGGGCAATGGAGTCTaGGGCTCCCCACACTTCTTC +
Preference number: 2 (lower is better)
Translates to: STGFSSMDACLLTIGPVQMGNGV*GSPHFF
Trigger: GAAGAAGTGTGGGGAGCCCCAGACTCCATTGCCCAT...TTGAACTGGCCCAATAGTCAGAAGACAGGCATCCATAGAAGAAAAACCAGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR-3UTR TCA 90 bp GATACCATTTCCTTTTCTACAGAGTTAGCTGCCTGGCTTCTAGTTCCACCATCCTACAGAAACACTGTCTaGATCTCCTCTACTCCTCCC +
Preference number: 2 (lower is better)
Translates to: DTISFSTELAAWLLVPPSYRNTV*ISSTPP
Trigger: GGGAGGAGTAGAGGAGATTCAGACAGTGTTTCTGTA...GGATGGTGGAACTAGAAGCCAGGCAGCTAACTCTGTAGAAAAGGAAATGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR-3UTR TCA 90 bp GATGGGCACTGGATTCAGAAGTTACTGAGATCAGTCTTTTTAGTTTTACAGAAAAAGAGCATTGTGGGTTaGCTGAGAGTCTGTGATGGG +
Preference number: 2 (lower is better)
Translates to: DGHWIQKLLRSVFLVLQKKSIVG*LRVCDG
Trigger: CCCATCACAGACTCTCAGTCAACCCACAATGCTCTT...TTTCTGTAAAACTAAAAAGACTGATCTCAGTAACTTCTGAATCCAGTGCCCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR TCA 72 bp GCAGACAGGCTCCCCAAAGAACCTGACCTGGTCCTCTaGCTAACTGGAGCTGAATACAAAGAGCATTGTGGG +
Preference number: 3 (lower is better)
Translates to: ADRLPKEPDLVL*LTGAEYKEHCG
Trigger: CCCACAATGCTCTTTGTATTCAGCTCCAGTTAGTCAGAGGACCAGGTCAGGTTCTTTGGGGAGCCTGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR GCA 72 bp CCACCATCCTGTATCAACTGGTTTTTCTTCTATGGATaGCTGTCTTCTGACTATTGGGCCAGTTCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: PPSCINWFFFYG*LSSDYWASSRQ
Trigger: CTGCCTTGAACTGGCCCAATAGTCAGAAGACAGGCATCCATAGAAGAAAAACCAGTTGATACAGGATGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR CCA 72 bp GCTGCCTGGCTTCTAGTTCCACCATCCTGTATCAACTaGTTTTTCTTCTATGGATGCCTGTCTTCTGACTAT +
Preference number: 3 (lower is better)
Translates to: AAWLLVPPSCIN*FFFYGCLSSDY
Trigger: ATAGTCAGAAGACAGGCATCCATAGAAGAAAAACCAGTTGATACAGGATGGTGGAACTAGAAGCCAGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR CCA 72 bp CCTGATACCATTTCCTTTTCTACAGAGTTAGCTGCCTaGCTTCTAGTTCCACCATCCTGTATCAACTGGTTT +
Preference number: 3 (lower is better)
Translates to: PDTISFSTELAA*LLVPPSCINWF
Trigger: AAACCAGTTGATACAGGATGGTGGAACTAGAAGCCAGGCAGCTAACTCTGTAGAAAAGGAAATGGTATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR TCA 72 bp TATCAACTGGTTTTTCTTCTATGGATGCCTGTCTTCTaGCTATTGGGCCAGTTCAAGGCAGTAGAGTCCATT +
Preference number: 3 (lower is better)
Translates to: YQLVFLLWMPVF*LLGQFKAVESI
Trigger: AATGGACTCTACTGCCTTGAACTGGCCCAATAGTCAGAAGACAGGCATCCATAGAAGAAAAACCAGTTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
3UTR TCA 72 bp TTGGCTCCTTTTAACATGAGGGCCATACTGATCATCTaGTTTCTCTCAGGCCATATAAGCTCTGGAAAATGG +
Preference number: 3 (lower is better)
Translates to: LAPFNMRAILII*FLSGHISSGKW
Trigger: CCATTTTCCAGAGCTTATATGGCCTGAGAGAAATCAGATGATCAGTATGGCCCTCATGTTAAAAGGAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR TCA 90 bp GTCTGTGATGGGCAATGGAGTCTGGGGCTCCCCACACTTCTTCCAGACTCTGATGACCAGAGCCTTCACTaGCCTCACTTGCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VCDGQWSLGLPTLLPDSDDQSLH*PHLLSQ
Trigger: CTGGGAAAGCAAGTGAGGTCAGTGAAGGCTCTGGTC...ATCAGAGTCTGGAAGAAGTGTGGGGAGCCCCAGACTCCATTGCCCATCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR TCA 90 bp CAATGGAGTCTGGGGCTCCCCACACTTCTTCCAGACTCTGATGGTGAAACACCACTTTCTCTCAGGTGCTaGTGCAGATCTCGGATGAGA +
Preference number: 4 (lower is better)
Translates to: QWSLGLPTLLPDSDGETPLSLRC*CRSRMR
Trigger: TCTCATCCGAGATCTGCATCAGCACCTGAGAGAAAG...TGGTGTTTCACCATCAGAGTCTGGAAGAAGTGTGGGGAGCCCCAGACTCCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR TCA 90 bp CAATGGAGTCTGGGGCTCCCCACACTTCTTCCAGACTCTGATGGTGAAACACCATCGAGGCCATTTCTGTaGAGACATACTGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: QWSLGLPTLLPDSDGETPSRPFL*RHTGFL
Trigger: TAGGAAGCCAGTATGTCTTCACAGAAATGGCCTCGA...TGGTGTTTCACCATCAGAGTCTGGAAGAAGTGTGGGGAGCCCCAGACTCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR GCA 90 bp ACACTGTCTGAATCTCCTCTACTCCTCCCCAAGGAAATTCACAGCAGACAGGCTGGCTTCCTAGGTAAGTaGAGACAAAGGCAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLSESPLLLPKEIHSRQAGFLGK*RQRQLP
Trigger: TGGCAGCTGCCTTTGTCTGCACTTACCTAGGAAGCC...AGCCTGTCTGCTGTGAATTTCCTTGGGGAGGAGTAGAGGAGATTCAGACAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR GCA 90 bp GATACCATTTCCTTTTCTACAGAGTTAGCTGCCTGGCTTCTAGTTCCACCATCCCAGTTCTCCTTCCATTaGCCTTACCATGACGTACAG +
Preference number: 4 (lower is better)
Translates to: DTISFSTELAAWLLVPPSQFSFH*PYHDVQ
Trigger: CTGTACGTCATGGTAAGGGCAATGGAAGGAGAACTG...GGATGGTGGAACTAGAAGCCAGGCAGCTAACTCTGTAGAAAAGGAAATGGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR GCA 90 bp TTTTCTACAGAGTTAGCTGCCTGGCTTCTAGTTCCACCATCCTGTATCAACTGGGCAGACAAAGGCAGCTaGCACTGTGATAATGAAGTT +
Preference number: 4 (lower is better)
Translates to: FSTELAAWLLVPPSCINWADKGS*HCDNEV
Trigger: AACTTCATTATCACAGTGGCAGCTGCCTTTGTCTGC...CCAGTTGATACAGGATGGTGGAACTAGAAGCCAGGCAGCTAACTCTGTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR TCA 90 bp TTCTACAGAGTTAGCTGCCTGGCTTCTAGTTCCACCATCCTGTATCAACTGGTTCCTTCTAGGAGTTCATaGAGATACAGCCTGGAATTT +
Preference number: 4 (lower is better)
Translates to: FYRVSCLASSSTILYQLVPSRSS*RYSLEF
Trigger: AAATTCCAGGCTGTATCTTCATGAACTCCTAGAAGG...AACCAGTTGATACAGGATGGTGGAACTAGAAGCCAGGCAGCTAACTCTGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR GCA 90 bp GATACCATTTCCTTTTCTACAGAGTTAGCTGCCTGGCTTCTAGTTCCACCATCCGAAAGTAGATGTCACTaGCTTCTAGGAGTTCATGAA +
Preference number: 4 (lower is better)
Translates to: DTISFSTELAAWLLVPPSESRCH*LLGVHE
Trigger: TTCATGAACTCCTAGAAGGCAGTGACATCTACTTTC...GGATGGTGGAACTAGAAGCCAGGCAGCTAACTCTGTAGAAAAGGAAATGGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR CCA 90 bp GATGGGCACTGGATTCAGAAGTTACTGAGATCAGTCTTTTTAGTTTTACAGAAACATGAAGATACAGCCTaGAATTTCTTTCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DGHWIQKLLRSVFLVLQKHEDTA*NFFLSG
Trigger: ACCTGAGAGAAAGAAATTCCAGGCTGTATCTTCATG...TTTCTGTAAAACTAAAAAGACTGATCTCAGTAACTTCTGAATCCAGTGCCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS TCA 90 bp ATTTCTTTCTCTCAGGTGCTGATGCAGATCTCGGATGAGACGGAATaGAACCAGGCGCCGGGGTCCCGTGGCATTATCACTGCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: ISFSQVLMQISDETE*NQAPGSRGIITARV
Trigger: CACGCGGGCAGTGATAATGCCACGGGACCCCGGCGCCTGGTTTCATTCCGTCTCATCCGAGATCTGCATCAGCACCTGAGAGAAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS GCA 90 bp CTCGCCCAGTTCTCCTTCCATTGCCCTTACCATGACGTACAGTTCTaGCAGACCTACCACCGAGGCAACGATCAATGCAGCCAGCACTCT +
Preference number: 5 (lower is better)
Translates to: LAQFSFHCPYHDVQF*QTYHRGNDQCSQHS
Trigger: AGAGTGCTGGCTGCATTGATCGTTGCCTCGGTGGTAGGTCTGGCAGAACTGTACGTCATGGTAAGGGCAATGGAAGGAGAACTGGGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS TCA 90 bp ACAGCCTGGAATTTCTTTCTCTCAGGTGCTGATGCAGATCTCGGATaGGACGGAATGAAACCAGGCGCCGGGGTCCCGTGGCATTATCAC +
Preference number: 5 (lower is better)
Translates to: TAWNFFLSGADADLG*DGMKPGAGVPWHYH
Trigger: GTGATAATGCCACGGGACCCCGGCGCCTGGTTTCATTCCGTCTCATCCGAGATCTGCATCAGCACCTGAGAGAAAGAAATTCCAGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS TCA 90 bp CCGAGGCAACGATCAATGCAGCCAGCACTCTCGAGGCCATTTCTGTaGAGACATACTGGCTTCCTAGGTAAGTGCAGACAAAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PRQRSMQPALSRPFL*RHTGFLGKCRQRQL
Trigger: CAGCTGCCTTTGTCTGCACTTACCTAGGAAGCCAGTATGTCTTCACAGAAATGGCCTCGAGAGTGCTGGCTGCATTGATCGTTGCCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS GCA 90 bp CATGACGTACAGTTCTGCCAGACCTACCACCGAGGCAACGATCAATaGAGCCAGCACTCTCGAGGCCATTTCTGTGAAGACATACTGGCT +
Preference number: 5 (lower is better)
Translates to: HDVQFCQTYHRGNDQ*SQHSRGHFCEDILA
Trigger: AGCCAGTATGTCTTCACAGAAATGGCCTCGAGAGTGCTGGCTGCATTGATCGTTGCCTCGGTGGTAGGTCTGGCAGAACTGTACGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR CAA 90 bp TCAACTGGTTTTTCTTCTATGGATGCCTGTCTTCTGACTATTGGGCCAGTTCAAACTGTGATAATGAAGTaGAAGATGGTGACGACCAGA +
Preference number: 5 (lower is better)
Translates to: STGFSSMDACLLTIGPVQTVIMK*KMVTTR
Trigger: TCTGGTCGTCACCATCTTCAACTTCATTATCACAGT...TTGAACTGGCCCAATAGTCAGAAGACAGGCATCCATAGAAGAAAAACCAGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS-3UTR CAA 90 bp TGGGCACTGGATTCAGAAGTTACTGAGATCAGTCTTTTTAGTTTTACAGAAACACGCTTATACTCCTCATaGGCTAGCTGTATCTTAATC +
Preference number: 5 (lower is better)
Translates to: WALDSEVTEISLFSFTETRLYSS*ASCILI
Trigger: GATTAAGATACAGCTAGCCAATGAGGAGTATAAGCG...TGTTTCTGTAAAACTAAAAAGACTGATCTCAGTAACTTCTGAATCCAGTGCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS TCA 72 bp TCTCAGGTGCTGATGCAGATCTCGGATGAGACGGAATaGAACCAGGCGCCGGGGTCCCGTGGCATTATCACT +
Preference number: 6 (lower is better)
Translates to: SQVLMQISDETE*NQAPGSRGIIT
Trigger: AGTGATAATGCCACGGGACCCCGGCGCCTGGTTTCATTCCGTCTCATCCGAGATCTGCATCAGCACCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS TCA 72 bp AATTTCTTTCTCTCAGGTGCTGATGCAGATCTCGGATaGGACGGAATGAAACCAGGCGCCGGGGTCCCGTGG +
Preference number: 6 (lower is better)
Translates to: NFFLSGADADLG*DGMKPGAGVPW
Trigger: CCACGGGACCCCGGCGCCTGGTTTCATTCCGTCTCATCCGAGATCTGCATCAGCACCTGAGAGAAAGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS TCA 72 bp ACAGCTCGCCCAGTTCTCCTTCCATTGCCCTTACCATaGCGTACAGTTCTGCCAGACCTACCACCGAGGCAA +
Preference number: 6 (lower is better)
Translates to: TARPVLLPLPLP*RTVLPDLPPRQ
Trigger: TTGCCTCGGTGGTAGGTCTGGCAGAACTGTACGTCATGGTAAGGGCAATGGAAGGAGAACTGGGCGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS GCA 72 bp CAGTTCTGCCAGACCTACCACCGAGGCAACGATCAATaGAGCCAGCACTCTCGAGGCCATTTCTGTGAAGAC +
Preference number: 6 (lower is better)
Translates to: QFCQTYHRGNDQ*SQHSRGHFCED
Trigger: GTCTTCACAGAAATGGCCTCGAGAGTGCTGGCTGCATTGATCGTTGCCTCGGTGGTAGGTCTGGCAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS GCA 72 bp TTCTCCTTCCATTGCCCTTACCATGACGTACAGTTCTaGCAGACCTACCACCGAGGCAACGATCAATGCAGC +
Preference number: 6 (lower is better)
Translates to: FSFHCPYHDVQF*QTYHRGNDQCS
Trigger: GCTGCATTGATCGTTGCCTCGGTGGTAGGTCTGGCAGAACTGTACGTCATGGTAAGGGCAATGGAAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS TCA 72 bp CGATCAATGCAGCCAGCACTCTCGAGGCCATTTCTGTaGAGACATACTGGCTTCCTAGGTAAGTGCAGACAA +
Preference number: 6 (lower is better)
Translates to: RSMQPALSRPFL*RHTGFLGKCRQ
Trigger: TTGTCTGCACTTACCTAGGAAGCCAGTATGTCTTCACAGAAATGGCCTCGAGAGTGCTGGCTGCATTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS CAA 72 bp CAAGTGACATTGCGAGTGATCCGCTTATACTCCTCATaGGCTAGCTGTATCTTAATCTTCTCTAGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: QVTLRVIRLYSS*ASCILIFSSRA
Trigger: TGCCCGGCTAGAGAAGATTAAGATACAGCTAGCCAATGAGGAGTATAAGCGGATCACTCGCAATGTCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8
CDS CCA 72 bp TGTCACTGCCTTCTAGGAGTTCATGAAGATACAGCCTaGAATTTCTTTCTCTCAGGTGCTGATGCAGATCTC +
Preference number: 6 (lower is better)
Translates to: CHCLLGVHEDTA*NFFLSGADADL
Trigger: GAGATCTGCATCAGCACCTGAGAGAAAGAAATTCCAGGCTGTATCTTCATGAACTCCTAGAAGGCAGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052566.8