Pregenerated sensors for TMEM196 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048004Ensembl transcript IDs: ENSMUST00000058644.15, ENSMUST00000183694.8, ENSMUST00000184069.3, ENSMUST00000184209.2, ENSMUST00000184820.8
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGTTCATCTCAACAGGTTTACTGATGACATTGTTAAAGGCTCATaGGGCCTTAGACCAAATTATTGCTGTTTTGTTAGCACAGTGAAA | + |
|
Preference number: 1 (lower is better) Translates to: VVHLNRFTDDIVKGS*GLRPNYCCFVSTVK Trigger: TTTCACTGTGCTAACAAAACAGCAATAATTTGGTCTAAGGCCCCATGAGCCTTTAACAATGTCATCAGTAAACCTGTTGAGATGAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR-3UTR TCA 90 bp | ACATGCCAAAGACATGGAAGCGAGATGCAGTGGGTACAGGGAGGAGGTCTTTTTTCAGGATGCCTCCAATaGGTCCACAGATACAGCACG | + |
|
Preference number: 2 (lower is better) Translates to: TCQRHGSEMQWVQGGGLFSGCLQ*VHRYST Trigger: CGTGCTGTATCTGTGGACTCATTGGAGGCATCCTGA...AAAAAGACCTCCTCCCTGTACCCACTGCATCTCGCTTCCATGTCTTTGGCATGT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000184209.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGAAAGTTTATACCGGGATAAAGGGTGAGTaGGGCCAAACTGAGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: IGQYAEMTKLQHFWKVYTGIKGE*GQTEKE Trigger: TTCCTTCTCAGTTTGGCCTCACTCACCCTTTATCCC...GGTATAAACTTTCCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| 3UTR-3UTR TCA 90 bp | AGTATTAACTTCACTAAGGTTACCATTTCCCAATTACAGAGCTTAATTTGGCTGGGGATAAAGGGTGAGTaGGGCCAAACTGAGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SINFTKVTISQLQSLIWLGIKGE*GQTEKE Trigger: TTCCTTCTCAGTTTGGCCTCACTCACCCTTTATCCC...CAGCCAAATTAAGCTCTGTAATTGGGAAATGGTAACCTTAGTGAAGTTAATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTAAGAGCCATTTTAACTaGTACTCCCAGGTCTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RRNNFSRCPGEIRNPRAIKSHFN*YSQVFS Trigger: GCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTT...AATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGAAAGTTTATACCAAGAGCCATTTTAACTaGTACTCCCAGGTCTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: IGQYAEMTKLQHFWKVYTKSHFN*YSQVFS Trigger: GCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTT...GGTATAAACTTTCCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTATATTCATGCTTCAATATTCAAGTCACTCAGCTCCATATGTATCAGCCAAAACATCAGTTGCGGTaGTCCATTACTCATGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SLYSCFNIQVTQLHMYQPKHQLR*SITHVV Trigger: GACAACATGAGTAATGGAGCACCGCAACTGATGTTT...TGGCTGATACATATGGAGCTGAGTGACTTGAATATTGAAGCATGAATATAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCTAGAAGTGATAGCGTCTTCTTTTTGCATTTAAAGCATACCCCACACCACATTCTGTATTTTACATaGCAACAGAGAAATGCTACC | + |
|
Preference number: 2 (lower is better) Translates to: FPRSDSVFFLHLKHTPHHILYFT*QQRNAT Trigger: GGTAGCATTTCTCTGTTGGCATGTAAAATACAGAAT...GTGGTGTGGGGTATGCTTTAAATGCAAAAAGAAGACGCTATCACTTCTAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR CAA 90 bp | AGACCAAATTATTGCTGTTTTGTTAGCACAGTGAAAACTCTTGTCTaGCTTGTGACTGTAAGGTGTTCTCATACCAAGCATGAAATATAT | + |
|
Preference number: 2 (lower is better) Translates to: RPNYCCFVSTVKTLV*LVTVRCSHTKHEIY Trigger: ATATATTTCATGCTTGGTATGAGAACACCTTACAGTCACAAGCAAGACAAGAGTTTTCACTGTGCTAACAAAACAGCAATAATTTGGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR CAA 90 bp | TATAATTCTGTATTTTACATGCCAACAGAGAAATGCTACCAAAATTaGAGTCGGTGGGTTTCTTCCTTAAAGATTAAGCCAACTTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: YNSVFYMPTEKCYQN*SRWVSSLKIKPTSA Trigger: TGCTGAAGTTGGCTTAATCTTTAAGGAAGAAACCCACCGACTCAAATTTTGGTAGCATTTCTCTGTTGGCATGTAAAATACAGAATTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR-3UTR CCA 90 bp | CAAGAATCATCTTATACCCTAAGTAAATCACTCCAATTTGAGCTGAGAAAGCACCAAAATTTGAGTCGGTaGGTTTCTTCCTTAAAGATT | + |
|
Preference number: 2 (lower is better) Translates to: QESSYTLSKSLQFELRKHQNLSR*VSSLKI Trigger: AATCTTTAAGGAAGAAACCCACCGACTCAAATTTTG...GTGCTTTCTCAGCTCAAATTGGAGTGATTTACTTAGGGTATAAGATGATTCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR GCA 72 bp | CCCAGGAGAAATAAGAAATCCAAGAGCCATTTTAACTaGTACTCCCAGGTCTTCAGCTTCTCCTGCCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: PRRNKKSKSHFN*YSQVFSFSCLM Trigger: CATGAGGCAGGAGAAGCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTTGGATTTCTTATTTCTCCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| 3UTR GCA 72 bp | CATTTTAACTGCTACTCCCAGGTCTTCAGCTTCTCCTaGCTCATGAACAACCTGAAAAATGTTGAGTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HFNCYSQVFSFS*LMNNLKNVEFF Trigger: AAAGAACTCAACATTTTTCAGGTTGTTCATGAGGCAGGAGAAGCTGAAGACCTGGGAGTAGCAGTTAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| 3UTR GCA 72 bp | AGTGAGGCCAAACTGAGAAGGAATAACTTTAGTCGATaGCCAGGAGAAATAAGAAATCCAAGAGCCATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SEAKLRRNNFSR*PGEIRNPRAIL Trigger: TAAAATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAGTTTGGCCTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| 3UTR CCA 72 bp | CTCAACAGGTTTACTGATGACATTGTTAAAGGCTCATaGGGCCTTAGACCAAATTATTGCTGTTTTGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LNRFTDDIVKGS*GLRPNYCCFVS Trigger: GCTAACAAAACAGCAATAATTTGGTCTAAGGCCCCATGAGCCTTTAACAATGTCATCAGTAAACCTGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR CCA 72 bp | ATGCCAACAGAGAAATGCTACCAAAATTTGAGTCGGTaGGTTTCTTCCTTAAAGATTAAGCCAACTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: MPTEKCYQNLSR*VSSLKIKPTSA Trigger: TGCTGAAGTTGGCTTAATCTTTAAGGAAGAAACCCACCGACTCAAATTTTGGTAGCATTTCTCTGTTGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR TCA 72 bp | ACACACACACACACACACACACACACACACACACTGTaGACTATTAAGATAAGTGCAGTGATTGAATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTL*TIKISAVIEFL Trigger: AAGAAATTCAATCACTGCACTTATCTTAATAGTTCACAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| 3UTR CCA 72 bp | TATGCAATTACAATTCTAAAGCTCATGCTAGTCAAATaGTGTCTGTGTACAGTATTAGTCACTGCTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YAITILKLMLVK*CLCTVLVTAIS Trigger: GGAAATAGCAGTGACTAATACTGTACACAGACACCATTTGACTAGCATGAGCTTTAGAATTGTAATTGCATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGGATGCCTCCAATGAGTCCACAGATACAGCACGCTGAAAAGAGGATCATGCCGAGCTGCGGCGTGTaGTCTCGGAGAGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRMPPMSPQIQHAEKRIMPSCGV*SRRARL Trigger: CAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGG...CATGATCCTCTTTTCAGCGTGCTGTATCTGTGGACTCATTGGAGGCATCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184209.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCCCGAGCTGCGGCGTGTaGTCTCGGAGAGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNNFSRCPGEIRNPRAPSCGV*SRRARL Trigger: CAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGG...GGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR GCA 90 bp | GATTGTACTCTTCCATTAAACATCAGTTGCGGTGCTCCATTACTCATGTTGTCTCCGAGCTGCGGCGTGTaGTCTCGGAGAGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCTLPLNISCGAPLLMLSPSCGV*SRRARL Trigger: CAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGG...AGACAACATGAGTAATGGAGCACCGCAACTGATGTTTAATGGAAGAGTACAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR GCA 90 bp | AGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTTTACCGAGCTGCGGCGTGTaGTCTCGGAGAGCCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNNFSRCPGEIRNPRAILPSCGV*SRRARL Trigger: CAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGG...TAAAATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCCCAAAAGGCTCCCAATaGTCTGGCCGCTGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRRNNFSRCPGEIRNPRAPKGSQ*SGRWCT Trigger: TGTGCACCAGCGGCCAGATCATTGGGAGCCTTTTGG...GGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 |
||
| CDS-3UTR GCA 90 bp | ATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGAAAGTTTATACCGACGAGTCTCCGAGCTaGGGCGTGTGCTCTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGQYAEMTKLQHFWKVYTDESPS*GVCSRR Trigger: TCTCCGAGAGCACACGCCGCAGCTCGGAGACTCGTC...GGTATAAACTTTCCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCGACATGGAAGCGAGATaGAGTGGGTACAGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRRNNFSRCPGEIRNPRADMEAR*SGYREE Trigger: CTCCTCCCTGTACCCACTGCATCTCGCTTCCATGTC...GGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCGCACCACCGGGCAGCTaGGCAAGTCGGTTATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRRNNFSRCPGEIRNPRAAPPGS*ASRLFQ Trigger: TTGAAATAACCGACTTGCCCAGCTGCCCGGTGGTGC...GGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATAAGAAATCCAAGAGCCATTTTAACTGCTACTCCCAGGTCTTCAGCTTCTGGCTAGACGACAAGTaGGCCAAGAGGAGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNKKSKSHFNCYSQVFSFWLDDK*AKRRQC Trigger: GCACTGTCTCCTCTTGGCTCACTTGTCGTCTAGCCA...GAAGCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTTGGATTTCTTATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR CCA 90 bp | AGAAATAAGAAATCCAAGAGCCATTTTAACTGCTACTCCCAGGTCTTCAGCTTCGGAAGCGAGATGCAGTaGGTACAGGGAGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNKKSKSHFNCYSQVFSFGSEMQ*VQGGGL Trigger: AAGACCTCCTCCCTGTACCCACTGCATCTCGCTTCC...GAAGCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTTGGATTTCTTATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR CCA 90 bp | GATTGTACTCTTCCATTAAACATCAGTTGCGGTGCTCCATTACTCATGTTGTCTGGAAGCGAGATGCAGTaGGTACAGGGAGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DCTLPLNISCGAPLLMLSGSEMQ*VQGGGL Trigger: AAGACCTCCTCCCTGTACCCACTGCATCTCGCTTCC...AGACAACATGAGTAATGGAGCACCGCAACTGATGTTTAATGGAAGAGTACAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGAAAGTTTATACCCCAAAAGGCTCCCAATaGTCTGGCCGCTGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: IGQYAEMTKLQHFWKVYTPKGSQ*SGRWCT Trigger: TGTGCACCAGCGGCCAGATCATTGGGAGCCTTTTGG...GGTATAAACTTTCCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGTCTTCAGCTTCTCCTGCCTCATGAACAACCTGAAAAATGTTGAGTTCACAGATACAGCACGCTaGAAAGAGGATCATGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQVFSFSCLMNNLKNVEFTDTAR*KEDHDK Trigger: CTTGTCATGATCCTCTTTTCAGCGTGCTGTATCTGT...GAACTCAACATTTTTCAGGTTGTTCATGAGGCAGGAGAAGCTGAAGACCTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR TCA 90 bp | AACATTGATTGTACTCTTCCATTAAACATCAGTTGCGGTGCTCCATTACTCATGTGGCTAGACGACAAGTaGGCCAAGAGGAGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NIDCTLPLNISCGAPLLMWLDDK*AKRRQC Trigger: GCACTGTCTCCTCTTGGCTCACTTGTCGTCTAGCCA...CATGAGTAATGGAGCACCGCAACTGATGTTTAATGGAAGAGTACAATCAATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR CCA 90 bp | AATTCTAAAGCTCATGCTAGTCAAATGGTGTCTGTGTACAGTATTAGTCACTGCGGAAGCGAGATGCAGTaGGTACAGGGAGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSKAHASQMVSVYSISHCGSEMQ*VQGGGL Trigger: AAGACCTCCTCCCTGTACCCACTGCATCTCGCTTCC...GCAGTGACTAATACTGTACACAGACACCATTTGACTAGCATGAGCTTTAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000184069.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTGGAAGCGAGATGCAGTaGGTACAGGGAGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRNNFSRCPGEIRNPRAIGSEMQ*VQGGGL Trigger: AAGACCTCCTCCCTGTACCCACTGCATCTCGCTTCC...AATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR TCA 90 bp | CATATGCCACATAGAAGAAACTCATCTTTTTGTTTGTGGGCCTTTTGTTTCATTCCAAAAGGCTCCCAATaGTCTGGCCGCTGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HMPHRRNSSFCLWAFCFIPKGSQ*SGRWCT Trigger: TGTGCACCAGCGGCCAGATCATTGGGAGCCTTTTGG...AATGAAACAAAAGGCCCACAAACAAAAAGATGAGTTTCTTCTATGTGGCATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000184209.2 |
||
| CDS-3UTR TCA 90 bp | CTCATGCTAGTCAAATGGTGTCTGTGTACAGTATTAGTCACTGCTATTTCCATTTCAGGATGCCTCCAATaGGTCCACAGATACAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LMLVKWCLCTVLVTAISISGCLQ*VHRYST Trigger: CGTGCTGTATCTGTGGACTCATTGGAGGCATCCTGA...AATGGAAATAGCAGTGACTAATACTGTACACAGACACCATTTGACTAGCATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000184069.3 |
||
| CDS-3UTR TCA 90 bp | AACATTGATTGTACTCTTCCATTAAACATCAGTTGCGGTGCTCCATTACTCATGTCAGGATGCCTCCAATaGGTCCACAGATACAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: NIDCTLPLNISCGAPLLMSGCLQ*VHRYST Trigger: CGTGCTGTATCTGTGGACTCATTGGAGGCATCCTGA...CATGAGTAATGGAGCACCGCAACTGATGTTTAATGGAAGAGTACAATCAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGATGGCTAGACGACAAGTaGGCCAAGAGGAGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLRRNNFSRCPGEIRNPRWLDDK*AKRRQC Trigger: GCACTGTCTCCTCTTGGCTCACTTGTCGTCTAGCCA...TCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | AGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTTTAGACATGGAAGCGAGATaGAGTGGGTACAGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNNFSRCPGEIRNPRAILDMEAR*SGYREE Trigger: CTCCTCCCTGTACCCACTGCATCTCGCTTCCATGTC...TAAAATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAAGAAATCCAAGAGCCATTTTAACTGCTACTCCCAGGTCTTCAGCTTCCCCAATGCCGATACATaGCAAAGACATGGAAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNKKSKSHFNCYSQVFSFPNADT*QRHGSE Trigger: CTCGCTTCCATGTCTTTGGCATGTATCGGCATTGGG...GAAGCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTTGGATTTCTTATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR TCA 90 bp | AAACTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGATCAGGATGCCTCCAATaGGTCCACAGATACAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: KLRRNNFSRCPGEIRNPRSGCLQ*VHRYST Trigger: CGTGCTGTATCTGTGGACTCATTGGAGGCATCCTGA...TCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTCATAAAAATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGTGGCTAGACGACAAGTaGGCCAAGAGGAGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FFIKIGQYAEMTKLQHFWWLDDK*AKRRQC Trigger: GCACTGTCTCCTCTTGGCTCACTTGTCGTCTAGCCA...CCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAATTTTTATGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| CDS-3UTR TCA 90 bp | GATTGTACTCTTCCATTAAACATCAGTTGCGGTGCTCCATTACTCATGTTGTCTGGAATGTTCCCTTTCTaGGAACATCCTCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DCTLPLNISCGAPLLMLSGMFPF*EHPPLL Trigger: GAGCAAAGGAGGATGTTCTCAGAAAGGGAACATTCC...AGACAACATGAGTAATGGAGCACCGCAACTGATGTTTAATGGAAGAGTACAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTCCCAATGCCGATACATaGCAAAGACATGGAAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRNNFSRCPGEIRNPRAIPNADT*QRHGSE Trigger: CTCGCTTCCATGTCTTTGGCATGTATCGGCATTGGG...AATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCATAAAAATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGGCACCACCGGGCAGCTaGGCAAGTCGGTTATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FFIKIGQYAEMTKLQHFWAPPGS*ASRLFQ Trigger: TTGAAATAACCGACTTGCCCAGCTGCCCGGTGGTGC...CCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAATTTTTATGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| CDS-3UTR TCA 90 bp | AGTATTAACTTCACTAAGGTTACCATTTCCCAATTACAGAGCTTAATTTGGCTGTCAGGATGCCTCCAATaGGTCCACAGATACAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SINFTKVTISQLQSLIWLSGCLQ*VHRYST Trigger: CGTGCTGTATCTGTGGACTCATTGGAGGCATCCTGA...CAGCCAAATTAAGCTCTGTAATTGGGAAATGGTAACCTTAGTGAAGTTAATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| CDS-3UTR TCA 90 bp | CTCATGCTAGTCAAATGGTGTCTGTGTACAGTATTAGTCACTGCTATTTCCATTGGAATGTTCCCTTTCTaGGAACATCCTCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LMLVKWCLCTVLVTAISIGMFPF*EHPPLL Trigger: GAGCAAAGGAGGATGTTCTCAGAAAGGGAACATTCC...AATGGAAATAGCAGTGACTAATACTGTACACAGACACCATTTGACTAGCATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | AAACTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGACCCAATGCCGATACATaGCAAAGACATGGAAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLRRNNFSRCPGEIRNPRPNADT*QRHGSE Trigger: CTCGCTTCCATGTCTTTGGCATGTATCGGCATTGGG...TCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | AGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTTTACCCAATGCCGATACATaGCAAAGACATGGAAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNNFSRCPGEIRNPRAILPNADT*QRHGSE Trigger: CTCGCTTCCATGTCTTTGGCATGTATCGGCATTGGG...TAAAATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCAAACATCAGTTGCGGTaGTCCATTACTCATGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRNNFSRCPGEIRNPRAKHQLR*SITHVV Trigger: GACAACATGAGTAATGGAGCACCGCAACTGATGTTT...GGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGCTAGTCAAATGGTGTCTGTGTACAGTATTAGTCACTGCTATTTCCATTTACATGCCAAAGACATaGAAGCGAGATGCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LMLVKWCLCTVLVTAISIYMPKT*KRDAVG Trigger: ACCCACTGCATCTCGCTTCCATGTCTTTGGCATGTA...AATGGAAATAGCAGTGACTAATACTGTACACAGACACCATTTGACTAGCATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000184069.3 |
||
| CDS-3UTR TCA 90 bp | AATTCTAAAGCTCATGCTAGTCAAATGGTGTCTGTGTACAGTATTAGTCACTGCACAGATACAGCACGCTaGAAAGAGGATCATGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSKAHASQMVSVYSISHCTDTAR*KEDHDK Trigger: CTTGTCATGATCCTCTTTTCAGCGTGCTGTATCTGT...GCAGTGACTAATACTGTACACAGACACCATTTGACTAGCATGAGCTTTAGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000184069.3 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTTTAGGAATGTTCCCTTTCTaGGAACATCCTCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNNFSRCPGEIRNPRAILGMFPF*EHPPLL Trigger: GAGCAAAGGAGGATGTTCTCAGAAAGGGAACATTCC...TAAAATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAAGAAATCCAAGAGCCATTTTAACTGCTACTCCCAGGTCTTCAGCTTCAAACATCAGTTGCGGTaGTCCATTACTCATGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNKKSKSHFNCYSQVFSFKHQLR*SITHVV Trigger: GACAACATGAGTAATGGAGCACCGCAACTGATGTTT...GAAGCTGAAGACCTGGGAGTAGCAGTTAAAATGGCTCTTGGATTTCTTATTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 |
||
| CDS-3UTR GCA 90 bp | AACATTGATTGTACTCTTCCATTAAACATCAGTTGCGGTGCTCCATTACTCATGACAGTATTCCACATATaGCACATAGAAGAAACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIDCTLPLNISCGAPLLMTVFHI*HIEETG Trigger: CCCCGTTTCTTCTATGTGGCATATGTGGAATACTGT...CATGAGTAATGGAGCACCGCAACTGATGTTTAATGGAAGAGTACAATCAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184820.8 |
||
| 3UTR CAA 72 bp | TATTGCTGTTTTGTTAGCACAGTGAAAACTCTTGTCTaGCTTGTGACTGTAAGGTGTTCTCATACCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YCCFVSTVKTLV*LVTVRCSHTKH Trigger: ATGCTTGGTATGAGAACACCTTACAGTCACAAGCAAGACAAGAGTTTTCACTGTGCTAACAAAACAGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTCATAAAAATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGACAGTATTCCACATATaGCACATAGAAGAAACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFIKIGQYAEMTKLQHFWTVFHI*HIEETG Trigger: CCCCGTTTCTTCTATGTGGCATATGTGGAATACTGT...CCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAATTTTTATGAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058644.15 |
||
| 3UTR CAA 72 bp | GTATTTTACATGCCAACAGAGAAATGCTACCAAAATTaGAGTCGGTGGGTTTCTTCCTTAAAGATTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFYMPTEKCYQN*SRWVSSLKIKP Trigger: TGGCTTAATCTTTAAGGAAGAAACCCACCGACTCAAATTTTGGTAGCATTTCTCTGTTGGCATGTAAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | ATTGGTCAGTATGCTGAGATGACTAAGCTACAACATTTCTGGAAAGTTTATACCACAGTATTCCACATATaGCACATAGAAGAAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: IGQYAEMTKLQHFWKVYTTVFHI*HIEENT Trigger: TGTGTTTTCTTCTATGTGGCATATGTGGAATACTGT...GGTATAAACTTTCCAGAAATGTTGTAGCTTAGTCATCTCAGCATACTGACCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000183694.8 ENSMUST00000184069.3 |
||
| CDS-3UTR GCA 90 bp | TATACCCTAAGTAAATCACTCCAATTTGAGCTGAGAAAGCACAAGGGTGAAATAACAGTATTCCACATATaGCACATAGAAGAAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: YTLSKSLQFELRKHKGEITVFHI*HIEENT Trigger: TGTGTTTTCTTCTATGTGGCATATGTGGAATACTGT...TATTTCACCCTTGTGCTTTCTCAGCTCAAATTGGAGTGATTTACTTAGGGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184069.3 |
||
| CDS GCA 90 bp | ACAAGTGAGCCAAGAGGAGACAGTGCAGCCCCCAATGCCGATACATaGCAAAGACATGGAAGCGAGATGCAGTGGGTACAGGGAGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSEPRGDSAAPNADT*QRHGSEMQWVQGGG Trigger: ACCTCCTCCCTGTACCCACTGCATCTCGCTTCCATGTCTTTGGCATGTATCGGCATTGGGGGCTGCACTGTCTCCTCTTGGCTCACTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS TCA 90 bp | TTTCTGAGAACATCCTCCTTTGCTCATAGCTGGCTAGACGACAAGTaGGCCAAGAGGAGACAGTGCAGCCCCCAATGCCGATACATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLRTSSFAHSWLDDK*AKRRQCSPQCRYMP Trigger: TGGCATGTATCGGCATTGGGGGCTGCACTGTCTCCTCTTGGCTCACTTGTCGTCTAGCCAGCTATGAGCAAAGGAGGATGTTCTCAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCGCTCCATTACTCATGTaGTCTGTCATTTCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRRNNFSRCPGEIRNPRAAPLLM*SVISFS Trigger: TGAGAAAGAAATGACAGACAACATGAGTAATGGAGC...GGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCTTCTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 |
||
| CDS-3UTR CAA 90 bp | AGGAATAACTTTAGTCGATGCCCAGGAGAAATAAGAAATCCAAGAGCCATTTTAGCTCCATTACTCATGTaGTCTGTCATTTCTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RNNFSRCPGEIRNPRAILAPLLM*SVISFS Trigger: TGAGAAAGAAATGACAGACAACATGAGTAATGGAGC...TAAAATGGCTCTTGGATTTCTTATTTCTCCTGGGCATCGACTAAAGTTATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 |
||
| CDS GCA 72 bp | CTCCATACCGGGGACGAGTCTCCGAGCTGCGGCGTGTaGTCTCGGAGAGCCAGGCTGAAGCTGACCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHTGDESPSCGV*SRRARLKLTAP Trigger: GGGGGCGGTCAGCTTCAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGGAGACTCGTCCCCGGTATGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183694.8 |
||
| CDS GCA 72 bp | CTTCTTTCCGGGGACGAGTCTCCGAGCTGCGGCGTGTaGTCTCGGAGAGCCAGGCTGAAGCTGACCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSGDESPSCGV*SRRARLKLTAP Trigger: GGGGGCGGTCAGCTTCAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGGAGACTCGTCCCCGGAAAGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184209.2 |
||
| CDS GCA 72 bp | CACACCCCGCTCCATACCGGGGACGAGTCTCCGAGCTaGGGCGTGTGCTCTCGGAGAGCCAGGCTGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HTPLHTGDESPS*GVCSRRARLKL Trigger: CAGCTTCAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGGAGACTCGTCCCCGGTATGGAGCGGGGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183694.8 |
||
| CDS GCA 72 bp | AGAAGAAACGGGGACGAGTCTCCGAGCTGCGGCGTGTaGTCTCGGAGAGCCAGGCTGAAGCTGACCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRNGDESPSCGV*SRRARLKLTAP Trigger: GGGGGCGGTCAGCTTCAGCCTGGCTCTCCGAGAGCACACGCCGCAGCTCGGAGACTCGTCCCCGTTTCTTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058644.15 |
||
| CDS CCA 72 bp | CAGTGCAGCCCCCAATGCCGATACATGCCAAAGACATaGAAGCGAGATGCAGTGGGTACAGGGAGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QCSPQCRYMPKT*KRDAVGTGRRS Trigger: AGACCTCCTCCCTGTACCCACTGCATCTCGCTTCCATGTCTTTGGCATGTATCGGCATTGGGGGCTGCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS TCA 72 bp | ACATCCTCCTTTGCTCATAGCTGGCTAGACGACAAGTaGGCCAAGAGGAGACAGTGCAGCCCCCAATGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TSSFAHSWLDDK*AKRRQCSPQCR Trigger: TCGGCATTGGGGGCTGCACTGTCTCCTCTTGGCTCACTTGTCGTCTAGCCAGCTATGAGCAAAGGAGGATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||
| CDS GCA 72 bp | CCAAGAGGAGACAGTGCAGCCCCCAATGCCGATACATaGCAAAGACATGGAAGCGAGATGCAGTGGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: PRGDSAAPNADT*QRHGSEMQWVQ Trigger: CTGTACCCACTGCATCTCGCTTCCATGTCTTTGGCATGTATCGGCATTGGGGGCTGCACTGTCTCCTCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000058644.15 ENSMUST00000183694.8 ENSMUST00000184069.3 ENSMUST00000184820.8 |
||