Pregenerated sensors for TMEM192 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025521Ensembl transcript IDs: ENSMUST00000026595.13, ENSMUST00000079896.9, ENSMUST00000209852.2, ENSMUST00000209923.2, ENSMUST00000211405.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGCTCTCATGCCCACGAGCCTCTCAAGTCCTGGCTGGCTGAGTTaGCAGCTCCAACAACCGCTTACTCAGCAGAGCATTGTGTCGCTT | + |
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Preference number: 1 (lower is better) Translates to: AALMPTSLSSPGWLS*QLQQPLTQQSIVSL Trigger: AAGCGACACAATGCTCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR CCA 90 bp | GTGGACTCAGCGGCTCTCATGCCCACGAGCCTCTCAAGTCCTGGCTaGCTGAGTTGCCAGCTCCAACAACCGCTTACTCAGCAGAGCATT | + |
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Preference number: 1 (lower is better) Translates to: VDSAALMPTSLSSPG*LSCQLQQPLTQQSI Trigger: AATGCTCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAGTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR TCA 90 bp | ACTCAGCGGCTCTCATGCCCACGAGCCTCTCAAGTCCTGGCTGGCTaGGTTGCCAGCTCCAACAACCGCTTACTCAGCAGAGCATTGTGT | + |
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Preference number: 1 (lower is better) Translates to: TQRLSCPRASQVLAG*VASSNNRLLSRALC Trigger: ACACAATGCTCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCGGCTCTCATGCCCACGAGCCTCTCAAGTCCTGGCTGGCTGAGTTGCCAGGCTTGAAACAGTCCTaGAGCCAGTCTCTGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSGSHAHEPLKSWLAELPGLKQS*SQSLRQ Trigger: CTGCCTCAGAGACTGGCTTCAGGACTGTTTCAAGCC...TGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAGCCAGAATCAGCTCAAGGTACAGCTTGCTGGGCTCAGGGAAGGAGTGCTGGCAGCCGGGCAGTCTaGAGTCACTGTGGACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GQPESAQGTACWAQGRSAGSRAV*SHCGLS Trigger: GCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCC...AGCACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGCTGATTCTGGCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACGAGCCTCTCAAGTCCTGAAGTACATCAGGCAGTaGCTTGGCTCTGTTGAACCT | + |
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Preference number: 2 (lower is better) Translates to: LQSLWTQRLSCPRASQVLKYIRQ*LGSVEP Trigger: AGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTT...CAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGTCCTGGCTGGCTGAGTTGCCAGCTCCAACAACCGCTTACTCAGCAGAGCTCTCTGAGGCAGTATTaGTGGGGTAAGCATAAATTT | + |
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Preference number: 2 (lower is better) Translates to: SSPGWLSCQLQQPLTQQSSLRQY*WGKHKF Trigger: AAATTTATGCTTACCCCAGCAATACTGCCTCAGAGA...GCTCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTGCTGTCTCATCCTGTTaGTCTGGAAGGAGAGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: FKYIRQWLGSVEPPNLHGAVSSC*SGRRGD Trigger: GTCACCTCTCCTTCCAGACCAACAGGATGAGACAGC...ACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTAGTCTGGAAGGAGAGGTaGCCAGAAGTGGTCATAAGT | + |
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Preference number: 2 (lower is better) Translates to: SSTSGSGLALLNLLIFMVVWKER*PEVVIS Trigger: ACTTATGACCACTTCTGGTCACCTCTCCTTCCAGAC...TACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| 3UTR-3UTR GCA 90 bp | GTACCCACTTTCCACCTTTGTAACCTCCCCTTGAAAGGAAACAAAACCAACAGCCCAGCTGTAGTGTGTTaGAGTGTGTCACACAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: VPTFHLCNLPLKGNKTNSPAVVC*SVSHSV Trigger: TACACTGTGTGACACACTGCAACACACTACAGCTGG...GCTGTTGGTTTTGTTTCCTTTCAAGGGGAGGTTACAAAGGTGGAAAGTGGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTTTTATTGACTCTTTGTGAGTTTCATACCATGCACCCCAATTTCACTCATCTGGCAAATATTCACTaGAATGAGTCACTGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KFLLTLCEFHTMHPNFTHLANIH*NESLVW Trigger: CCAGACCAGTGACTCATTGCAGTGAATATTTGCCAG...ATGAGTGAAATTGGGGTGCATGGTATGAAACTCACAAAGAGTCAATAAAAACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| 3UTR GCA 72 bp | GCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTaGAGTCACTGTGGACTCAGCGGCTCTCATGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: AKAGVSCGSRAV*SHCGLSGSHAH Trigger: GTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| 3UTR CCA 72 bp | GCGGCTCTCATGCCCACGAGCCTCTCAAGTCCTGGCTaGCTGAGTTGCCAGCTCCAACAACCGCTTACTCAG | + |
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Preference number: 3 (lower is better) Translates to: AALMPTSLSSPG*LSCQLQQPLTQ Trigger: CTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR GCA 72 bp | GGGCCAGGACAGCCAGAATCAGCTCAAGGTACAGCTTaGTGGGCTCAGGGAAGGAGTGCTGCACACAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: GPGQPESAQGTA*WAQGRSAAHRG Trigger: TCCTCTGTGTGCAGCACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGCTGATTCTGGCTGTCCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR TCA 72 bp | CTCTCATGCCCACGAGCCTCTCAAGTCCTGGCTGGCTaGGTTGCCAGCTCCAACAACCGCTTACTCAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LSCPRASQVLAG*VASSNNRLLSR Trigger: TCTGCTGAGTAAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR CCA 72 bp | CCAGGACAGCCAGAATCAGCTCAAGGTACAGCTTGCTaGGCTCAGGGAAGGAGTGCTGCACACAGAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: PGQPESAQGTAC*AQGRSAAHRGG Trigger: TCCTCCTCTGTGTGCAGCACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGCTGATTCTGGCTGTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| 3UTR GCA 72 bp | CTCTACATAGGTAGAACTGGATTCAGGTTCCCAGCATaGACTGTGGACGCGACGTCGGCAAAGGCTGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: LYIGRTGFRFPA*TVDATSAKAGV Trigger: AACCCCAGCCTTTGCCGACGTCGCGTCCACAGTGCATGCTGGGAACCTGAATCCAGTTCTACCTATGTAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| 3UTR TCA 72 bp | GAAACCCATCTCATCATGGACATAGTGTGTCCCATCTaGTGTAGTGTGACACACACCAGCTGTAGTGTGTTG | + |
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Preference number: 3 (lower is better) Translates to: ETHLIMDIVCPI*CSVTHTSCSVL Trigger: CAACACACTACAGCTGGTGTGTGTCACACTACATCAGATGGGACACACTATGTCCATGATGAGATGGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| 3UTR GCA 72 bp | GTTTTTATCCAGACATCTTTACTGGCAAATATTCACTaGAATGAGTCACTGGTCTGGCTTGAGGTCTTGAGC | + |
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Preference number: 3 (lower is better) Translates to: VFIQTSLLANIH*NESLVWLEVLS Trigger: GCTCAAGACCTCAAGCCAGACCAGTGACTCATTGCAGTGAATATTTGCCAGTAAAGATGTCTGGATAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| 3UTR CCA 72 bp | GTCACACAGTGTAGGTTTTTATCCAGACATCTTTACTaGCAAATATTCACTGCAATGAGTCACTGGTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: VTQCRFLSRHLY*QIFTAMSHWSG Trigger: GCCAGACCAGTGACTCATTGCAGTGAATATTTGCCAGTAAAGATGTCTGGATAAAAACCTACACTGTGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTTTTTATTGACTCTTTGTGAGTTTCATACCATGCACCCCAATTTCACTCATCTTTGTAACCTCCCCTaGAAAGGAAACAAAACCAAC | + |
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Preference number: 3 (lower is better) Translates to: KFLLTLCEFHTMHPNFTHLCNLP*KGNKTN Trigger: GTTGGTTTTGTTTCCTTTCAAGGGGAGGTTACAAAG...ATGAGTGAAATTGGGGTGCATGGTATGAAACTCACAAAGAGTCAATAAAAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR GCA 90 bp | CACTGTGGACGCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCCTGGCTGGCTGAGTTaGCAGCTCCAACAACCGCTT | + |
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Preference number: 4 (lower is better) Translates to: HCGRDVGKGWGFLWQPGSPGWLS*QLQQPL Trigger: AAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGG...ACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTCCACAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR GCA 90 bp | CACTGTGGACGCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTGCTCAAGGTACAGCTTaGTGGGCTCAGGGAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HCGRDVGKGWGFLWQPGSAQGTA*WAQGRS Trigger: ACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGC...ACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTCCACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026595.13 |
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| CDS-3UTR TCA 90 bp | CTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCAGGCTTGAAACAGTCCTaGAGCCAGTCTCTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LWQPGSLQSLWTQRLSCPGLKQS*SQSLRQ Trigger: CTGCCTCAGAGACTGGCTTCAGGACTGTTTCAAGCC...TGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | CTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACAAGGTACAGCTTGCTaGGCTCAGGGAAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LWQPGSLQSLWTQRLSCPQGTAC*AQGRSA Trigger: AGCACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTG...TGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026595.13 |
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| CDS-3UTR CCA 90 bp | TGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACGTGTTGCCAGAAGAGTaGATGGTGAGGGCCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: CGSRAVCSHCGLSGSHAHVLPEE*MVRASV Trigger: AACACTGGCCCTCACCATCCACTCTTCTGGCAACAC...GTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026595.13 |
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| CDS-3UTR TCA 90 bp | AAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGGGCTTGAAACAGTCCTaGAGCCAGTCTCTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KGWGFLWQPGSLQSLWTQGLKQS*SQSLRQ Trigger: CTGCCTCAGAGACTGGCTTCAGGACTGTTTCAAGCC...CTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | GCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACGAGCGCTGGTGTAGTTTTCTaGGCACTTGTCTTCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: AAGQSAVTVDSAALMPTSAGVVF*ALVFSW Trigger: CCAACTGAAGACAAGTGCCCAGAAAACTACACCAGC...GCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR GCA 90 bp | GTAGAACTGGATTCAGGTTCCCAGCATGCACTGTGGACGCGACGTCGGCAAAGGCCTGGCTGGCTGAGTTaGCAGCTCCAACAACCGCTT | + |
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Preference number: 4 (lower is better) Translates to: VELDSGSQHALWTRRRQRPGWLS*QLQQPL Trigger: AAGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGG...CCTTTGCCGACGTCGCGTCCACAGTGCATGCTGGGAACCTGAATCCAGTTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | AGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGTTTCCCAAGGATTATaGCCGTCTGAACCTTCAACG | + |
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Preference number: 4 (lower is better) Translates to: RLGFPVAAGQSAVTVDSAVSQGL*PSEPST Trigger: CGTTGAAGGTTCAGACGGCCATAATCCTTGGGAAAC...CGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | TGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACAAGTACATCAGGCAGTaGCTTGGCTCTGTTGAACCT | + |
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Preference number: 4 (lower is better) Translates to: CGSRAVCSHCGLSGSHAHKYIRQ*LGSVEP Trigger: AGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTT...GTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | GCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACGCACTTGTCTTCAGTTaGATTAGGATACAAACACGG | + |
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Preference number: 4 (lower is better) Translates to: ATSAKAGVSCGSRAVCSHALVFS*IRIQTR Trigger: CCGTGTTTGTATCCTAATCCAACTGAAGACAAGTGC...GTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR GCA 90 bp | GCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACGAGCTCTCTGAGGCAGTATTaGTGGGGTAAGCATAAATTT | + |
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Preference number: 4 (lower is better) Translates to: AAGQSAVTVDSAALMPTSSLRQY*WGKHKF Trigger: AAATTTATGCTTACCCCAGCAATACTGCCTCAGAGA...GCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR GCA 90 bp | GGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGTCTCTGAGGCAGTATTaGTGGGGTAAGCATAAATTT | + |
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Preference number: 4 (lower is better) Translates to: GWGFLWQPGSLQSLWTQRSLRQY*WGKHKF Trigger: AAATTTATGCTTACCCCAGCAATACTGCCTCAGAGA...CCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | AAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGGTTTCCCAAGGATTATaGCCGTCTGAACCTTCAACG | + |
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Preference number: 4 (lower is better) Translates to: KGWGFLWQPGSLQSLWTQVSQGL*PSEPST Trigger: CGTTGAAGGTTCAGACGGCCATAATCCTTGGGAAAC...CTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | AAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGAAGTACATCAGGCAGTaGCTTGGCTCTGTTGAACCT | + |
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Preference number: 4 (lower is better) Translates to: KGWGFLWQPGSLQSLWTQKYIRQ*LGSVEP Trigger: AGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTT...CTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | AAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGATCTTCACAGAAGAGTaGATGGTGAGGGCCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: KGWGFLWQPGSLQSLWTQIFTEE*MVRASV Trigger: AACACTGGCCCTCACCATCCACTCTTCTGTGAAGAT...CTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | AGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACGAGCCTCTGAGGCAGTATTGCTaGGGTAAGCATAAATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SRAVCSHCGLSGSHAHEPLRQYC*GKHKFS Trigger: AGAAAATTTATGCTTACCCCAGCAATACTGCCTCAG...AGGCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTTGTACCCACTTTCCACCTTTGTAACCTCCCCTTGAAAGGAAACAAATGCACGTCAGGCCCCTaGAGCCAGTCTCTGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PPLVPTFHLCNLPLKGNKCTSGP*SQSLRQ Trigger: CTGCCTCAGAGACTGGCTTCAGGGGCCTGACGTGCA...TTTGTTTCCTTTCAAGGGGAGGTTACAAAGGTGGAAAGTGGGTACAAGAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CCA 90 bp | GTAGAACTGGATTCAGGTTCCCAGCATGCACTGTGGACGCGACGTCGGCAAAGGGCTGGTGTAGTTTTCTaGGCACTTGTCTTCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VELDSGSQHALWTRRRQRAGVVF*ALVFSW Trigger: CCAACTGAAGACAAGTGCCCAGAAAACTACACCAGC...CCTTTGCCGACGTCGCGTCCACAGTGCATGCTGGGAACCTGAATCCAGTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CCA 90 bp | CACTCATTTCCCCCTCCTCTTGTACCCACTTTCCACCTTTGTAACCTCCCCTTGCAAGGTACAGCTTGCTaGGCTCAGGGAAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: HSFPPPLVPTFHLCNLPLQGTAC*AQGRSA Trigger: AGCACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTG...CAAGGGGAGGTTACAAAGGTGGAAAGTGGGTACAAGAGGAGGGGGAAATGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTAGAGGCAGGCAGAGGTTaGAGGACAGCGGCTTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: SSTSGSGLALLNLLIFMVEAGRG*RTAASV Trigger: AACGGAAGCCGCTGTCCTGCAACCTCTGCCTGCCTC...TACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS-3UTR CCA 90 bp | CCCACTTTCCACCTTTGTAACCTCCCCTTGAAAGGAAACAAAACCAACAGCCCCGTGTTGCCAGAAGAGTaGATGGTGAGGGCCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PTFHLCNLPLKGNKTNSPVLPEE*MVRASV Trigger: AACACTGGCCCTCACCATCCACTCTTCTGGCAACAC...GGGGCTGTTGGTTTTGTTTCCTTTCAAGGGGAGGTTACAAAGGTGGAAAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTAGCTCAAGGTACAGCTTaGTGGGCTCAGGGAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SSTSGSGLALLNLLIFMVAQGTA*WAQGRS Trigger: ACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGC...TACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS-3UTR CCA 90 bp | TTCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTCAAGGTACAGCTTGCTaGGCTCAGGGAAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FKYIRQWLGSVEPPNLHGQGTAC*AQGRSA Trigger: AGCACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTG...ACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS-3UTR GCA 90 bp | TCTTTACTGGCAAATATTCACTGCAATGAGTCACTGGTCTGGCTTGAGGTCTTGGCTCAAGGTACAGCTTaGTGGGCTCAGGGAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLLANIHCNESLVWLEVLAQGTA*WAQGRS Trigger: ACTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGC...CAAGACCTCAAGCCAGACCAGTGACTCATTGCAGTGAATATTTGCCAGTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CCA 90 bp | TTCACTCATTTCCCCCTCCTCTTGTACCCACTTTCCACCTTTGTAACCTCCCCTGCTGGTGTAGTTTTCTaGGCACTTGTCTTCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: FTHFPLLLYPLSTFVTSPAGVVF*ALVFSW Trigger: CCAACTGAAGACAAGTGCCCAGAAAACTACACCAGC...AGGGGAGGTTACAAAGGTGGAAAGTGGGTACAAGAGGAGGGGGAAATGAGTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CCA 90 bp | TTCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTGTGTTGCCAGAAGAGTaGATGGTGAGGGCCAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: FKYIRQWLGSVEPPNLHGVLPEE*MVRASV Trigger: AACACTGGCCCTCACCATCCACTCTTCTGGCAACAC...ACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTACGCCAAAACAGGCTGTaGTTCTCTGACTGTACAGAC | + |
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Preference number: 4 (lower is better) Translates to: SSTSGSGLALLNLLIFMVRQNRL*FSDCTD Trigger: GTCTGTACAGTCAGAGAAGCACAGCCTGTTTTGGCG...TACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS-3UTR CCA 90 bp | GTACCCACTTTCCACCTTTGTAACCTCCCCTTGAAAGGAAACAAAACCAACAGCGTTTCCCAAGGATTATaGCCGTCTGAACCTTCAACG | + |
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Preference number: 4 (lower is better) Translates to: VPTFHLCNLPLKGNKTNSVSQGL*PSEPST Trigger: CGTTGAAGGTTCAGACGGCCATAATCCTTGGGAAAC...GCTGTTGGTTTTGTTTCCTTTCAAGGGGAGGTTACAAAGGTGGAAAGTGGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CCA 90 bp | CCCACTTTCCACCTTTGTAACCTCCCCTTGAAAGGAAACAAAACCAACAGCCCCCTGAGGCAGTATTGCTaGGGTAAGCATAAATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PTFHLCNLPLKGNKTNSPLRQYC*GKHKFS Trigger: AGAAAATTTATGCTTACCCCAGCAATACTGCCTCAG...GGGGCTGTTGGTTTTGTTTCCTTTCAAGGGGAGGTTACAAAGGTGGAAAGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CCA 90 bp | TGTGTCACACAGTGTAGGTTTTTATCCAGACATCTTTACTGGCAAATATTCACTAAGTACATCAGGCAGTaGCTTGGCTCTGTTGAACCT | + |
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Preference number: 4 (lower is better) Translates to: CVTQCRFLSRHLYWQIFTKYIRQ*LGSVEP Trigger: AGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTT...AGTGAATATTTGCCAGTAAAGATGTCTGGATAAAAACCTACACTGTGTGACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CCA 90 bp | GTAGCGTTCAAAAAGCAAATGCAGAATCCACAGGATAAGTTTCCCAAGGATTATGCTGGTGTAGTTTTCTaGGCACTTGTATGTATAAGC | + |
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Preference number: 4 (lower is better) Translates to: VAFKKQMQNPQDKFPKDYAGVVF*ALVCIS Trigger: GCTTATACATACAAGTGCCCAGAAAACTACACCAGC...ATAATCCTTGGGAAACTTATCCTGTGGATTCTGCATTTGCTTTTTGAACGCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| CDS-3UTR CCA 90 bp | TGTGTCACACAGTGTAGGTTTTTATCCAGACATCTTTACTGGCAAATATTCACTGCACTTGTCTTCAGTTaGATTAGGATACAAACACGG | + |
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Preference number: 4 (lower is better) Translates to: CVTQCRFLSRHLYWQIFTALVFS*IRIQTR Trigger: CCGTGTTTGTATCCTAATCCAACTGAAGACAAGTGC...AGTGAATATTTGCCAGTAAAGATGTCTGGATAAAAACCTACACTGTGTGACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CAA 90 bp | GTGGACGCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCTCCTGGCTGGCTGAGTaGCCAGCTCCAACAACCGCT | + |
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Preference number: 5 (lower is better) Translates to: VDATSAKAGVSCGSRAVCSWLAE*PAPTTA Trigger: AGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGA...GCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CAA 90 bp | GCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACAGCTCAAGGTACAGCTaGCTGGGCTCAGGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: ATSAKAGVSCGSRAVCSHSSRYS*LGSGKE Trigger: CTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGCT...GTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026595.13 |
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| CDS-3UTR CAA 90 bp | GCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCACGAGCGGGTCTAAACTGAGCTaGGAGAGAGTGGTGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: AAGQSAVTVDSAALMPTSGSKLS*ERVVWE Trigger: CTCCCACACCACTCTCTCCAAGCTCAGTTTAGACCC...GCTCGTGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 ENSMUST00000209923.2 |
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| CDS-3UTR CAA 90 bp | GACGCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTGGGTCTAAACTGAGCTaGGAGAGAGTGGTGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: DATSAKAGVSCGSRAVCSGSKLS*ERVVWE Trigger: CTCCCACACCACTCTCTCCAAGCTCAGTTTAGACCC...ACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CAA 90 bp | CTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGCGGCTCTCATGCCCAAGGAGCAGGGCTGTGTaGCCAGAAGAGTGGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: LWQPGSLQSLWTQRLSCPRSRAV*PEEWMV Trigger: CACCATCCACTCTTCTGGCAACACAGCCCTGCTCCT...TGGGCATGAGAGCCGCTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026595.13 |
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| CDS-3UTR CAA 90 bp | AAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTCACTGTGGACTCAGTCCTGGCTGGCTGAGTaGCCAGCTCCAACAACCGCT | + |
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Preference number: 5 (lower is better) Translates to: KGWGFLWQPGSLQSLWTQSWLAE*PAPTTA Trigger: AGCGGTTGTTGGAGCTGGCAACTCAGCCAGCCAGGA...CTGAGTCCACAGTGACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS GCA 90 bp | AAGGAGTCCTCGGCTAAGGGGGAAGACGTCCGCCAAAACAGGCTGTaGTTCTCTGACTGTACAGACGAGAGGCAGGCAGAGGAGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: KESSAKGEDVRQNRL*FSDCTDERQAEEAG Trigger: GCCTGCCTCCTCTGCCTGCCTCTCGTCTGTACAGTCAGAGAAGCACAGCCTGTTTTGGCGGACGTCTTCCCCCTTAGCCGAGGACTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCGGCTCTCATGCCCACGAGCCTCTCAAGTCCTGGCTGGCTGAGTTGCCAGGGTCTAAACTGAGCTaGGAGAGAGTGGTGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LSGSHAHEPLKSWLAELPGSKLS*ERVVWE Trigger: CTCCCACACCACTCTCTCCAAGCTCAGTTTAGACCC...TGGCAACTCAGCCAGCCAGGACTTGAGAGGCTCGTGGGCATGAGAGCCGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209923.2 |
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| CDS-3UTR CAA 90 bp | CACTGTGGACGCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTTTACTCAGCAGAGCATaGTGTCGCTTCAGGTACACA | + |
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Preference number: 5 (lower is better) Translates to: HCGRDVGKGWGFLWQPGSLLSRA*CRFRYT Trigger: TGTGTACCTGAAGCGACACAATGCTCTGCTGAGTAA...ACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTCCACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CAA 90 bp | GACGCGACGTCGGCAAAGGCTGGGGTTTCCTGTGGCAGCCGGGCAGTCTGCAGTTTACTCAGCAGAGCATaGTGTCGCTTCAGGTACACA | + |
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Preference number: 5 (lower is better) Translates to: DATSAKAGVSCGSRAVCSLLSRA*CRFRYT Trigger: TGTGTACCTGAAGCGACACAATGCTCTGCTGAGTAA...ACTGCAGACTGCCCGGCTGCCACAGGAAACCCCAGCCTTTGCCGACGTCGCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 |
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| CDS-3UTR CAA 90 bp | TTCACTCATTTCCCCCTCCTCTTGTACCCACTTTCCACCTTTGTAACCTCCCCTGGGTCTAAACTGAGCTaGGAGAGAGTGGTGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FTHFPLLLYPLSTFVTSPGSKLS*ERVVWE Trigger: CTCCCACACCACTCTCTCCAAGCTCAGTTTAGACCC...AGGGGAGGTTACAAAGGTGGAAAGTGGGTACAAGAGGAGGGGGAAATGAGTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS-3UTR CAA 90 bp | TTCAAGTACATCAGGCAGTGGCTTGGCTCTGTTGAACCTCCTAATCTTCATGGTAGCTCAAGGTACAGCTaGCTGGGCTCAGGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: FKYIRQWLGSVEPPNLHGSSRYS*LGSGKE Trigger: CTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGCT...ACCATGAAGATTAGGAGGTTCAACAGAGCCAAGCCACTGCCTGATGTACTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS-3UTR CAA 90 bp | CACTCATTTCCCCCTCCTCTTGTACCCACTTTCCACCTTTGTAACCTCCCCTTGTTAGCAGGACTCAGCTaGGATATCCCACTCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: HSFPPPLVPTFHLCNLPLLAGLS*DIPLSC Trigger: ACAGGAGAGTGGGATATCCAAGCTGAGTCCTGCTAA...CAAGGGGAGGTTACAAAGGTGGAAAGTGGGTACAAGAGGAGGGGGAAATGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS CCA 90 bp | AAGGATTATGGCCGTCTGAACCTTCAACGGGCTGGTGTAGTTTTCTaGGCACTTGTCTTCAGTTGGATTAGGATACAAACACGGCACACC | + |
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Preference number: 5 (lower is better) Translates to: KDYGRLNLQRAGVVF*ALVFSWIRIQTRHT Trigger: GGTGTGCCGTGTTTGTATCCTAATCCAACTGAAGACAAGTGCCCAGAAAACTACACCAGCCCGTTGAAGGTTCAGACGGCCATAATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 ENSMUST00000209852.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTGTCACACAGTGTAGGTTTTTATCCAGACATCTTTACTGGCAAATATTCAGCTCAAGGTACAGCTaGCTGGGCTCAGGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: QCVTQCRFLSRHLYWQIFSSRYS*LGSGKE Trigger: CTCCTTCCCTGAGCCCAGCAAGCTGTACCTTGAGCT...GAATATTTGCCAGTAAAGATGTCTGGATAAAAACCTACACTGTGTGACACACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209852.2 |
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| CDS GCA 72 bp | TCGGCTAAGGGGGAAGACGTCCGCCAAAACAGGCTGTaGTTCTCTGACTGTACAGACGAGAGGCAGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SAKGEDVRQNRL*FSDCTDERQAE Trigger: CTCTGCCTGCCTCTCGTCTGTACAGTCAGAGAAGCACAGCCTGTTTTGGCGGACGTCTTCCCCCTTAGCCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211405.2 |
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| CDS CCA 72 bp | TCCCAAGGATTATGGCCGTCTGAACCTTCAACGGGCTaGTGTAGTTTTCTGGGCACTTGTCTTCAGTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SQGLWPSEPSTG*CSFLGTCLQLD Trigger: ATCCAACTGAAGACAAGTGCCCAGAAAACTACACCAGCCCGTTGAAGGTTCAGACGGCCATAATCCTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026595.13 ENSMUST00000079896.9 ENSMUST00000209852.2 |
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| CDS CCA 72 bp | TTGGCTCTGTTGAACCTCCTAATCTTCACAGAAGAGTaGATGGTGAGGGCCAGTGTTTTGAGATGCCTCGTA | + |
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Preference number: 6 (lower is better) Translates to: LALLNLLIFTEE*MVRASVLRCLV Trigger: TACGAGGCATCTCAAAACACTGGCCCTCACCATCCACTCTTCTGTGAAGATTAGGAGGTTCAACAGAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079896.9 |
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