Pregenerated sensors for TMEM191C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055692Ensembl transcript IDs: ENSMUST00000164950.11, ENSMUST00000232167.2, ENSMUST00000232364.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTTCCAGCCCCACCTTTCACCATTGTTGAAGGACATCATCTCTaGCAACCCCATGACAGCCCAGCCTGGCTAGGCAGTGAGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: LLPAPPFTIVEGHHL*QPHDSPAWLGSEAR Trigger: TCTGGCCTCACTGCCTAGCCAGGCTGGGCTGTCATGGGGTTGCCAGAGATGATGTCCTTCAACAATGGTGAAAGGTGGGGCTGGAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGCATCCAGGGAAAATAATCCACCCACTACGGAGGGGACCCGACAGGCCAGCGGTCAGGCTGCGGCCTaGACACAAGCAGCCCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: SASRENNPPTTEGTRQASGQAAA*TQAAPP Trigger: TGGCGGGGCTGCTTGTGTCCAGGCCGCAGCCTGACC...GCTGGCCTGTCGGGTCCCCTCCGTAGTGGGTGGATTATTTTCCCTGGATGCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| 3UTR-3UTR GCA 90 bp | TTAGCCACAGTCTGCCCCCTTCCCTTGCGGGCAACCTGTGTGAGCCCCCAGGGCAGGGGAGACACTGACTaGATCCTGTGCCTTCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LATVCPLPLRATCVSPQGRGDTD*ILCLLH Trigger: ATGCAGAAGGCACAGGATGCAGTCAGTGTCTCCCCT...GCCCTGGGGGCTCACACAGGTTGCCCGCAAGGGAAGGGGGCAGACTGTGGCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR-3UTR CCA 90 bp | CAACCCCATGACAGCCCAGCCTGGCTAGGCAGTGAGGCCAGACCCCTAGACACTTCCAGCTGGTTGGCCTaGACCTCTTCGTTTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QPHDSPAWLGSEARPLDTSSWLA*TSSFFL Trigger: AAGGAAAAACGAAGAGGTCCAGGCCAACCAGCTGGA...AGTGTCTAGGGGTCTGGCCTCACTGCCTAGCCAGGCTGGGCTGTCATGGGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCAGCCCCACCTTTCACCATTGTTGAAGGACATCATCTCTGGCAACCCCGCTGAGGGGAGACACTaGCTGCATCCTGTGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SFQPHLSPLLKDIISGNPAEGRH*LHPVPS Trigger: AGAAGGCACAGGATGCAGTCAGTGTCTCCCCTCAGC...GGGGTTGCCAGAGATGATGTCCTTCAACAATGGTGAAAGGTGGGGCTGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAGCCTGGCTAGGCAGTGAGGCCAGACCCCTAGACACTTATTTAGCCACAACTGACTGCATCCTGTaGCTTCTGCATTCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SPAWLGSEARPLDTYLATTDCIL*LLHSRT Trigger: TGTCCTGGAATGCAGAAGGCACAGGATGCAGTCAGT...TGTGGCTAAATAAGTGTCTAGGGGTCTGGCCTCACTGCCTAGCCAGGCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCCAGCCCCACCTTTCACCATTGTTGAAGGACATCATCTCTGGCAACCCCGCATCCTGTGCCTTCTaGATTCCAGGACATGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: SFQPHLSPLLKDIISGNPASCAF*IPGHVS Trigger: GCTAACATGTCCTGGAATGCAGAAGGCACAGGATGC...GGGGTTGCCAGAGATGATGTCCTTCAACAATGGTGAAAGGTGGGGCTGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR-3UTR CAA 90 bp | CAACCCCATGACAGCCCAGCCTGGCTAGGCAGTGAGGCCAGACCCCTAGACACTGTCTGCCCCCTTCCCTaGCGGGCAACCTGTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: QPHDSPAWLGSEARPLDTVCPLP*RATCVS Trigger: GCTCACACAGGTTGCCCGCAAGGGAAGGGGGCAGAC...AGTGTCTAGGGGTCTGGCCTCACTGCCTAGCCAGGCTGGGCTGTCATGGGGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR GCA 72 bp | GAGGCCAGACCCCTAGACACTTATTTAGCCACAGTCTaGCCCCTTCCCTTGCGGGCAACCTGTGTGAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: EARPLDTYLATV*PLPLRATCVSP Trigger: GGGGCTCACACAGGTTGCCCGCAAGGGAAGGGGGCAGACTGTGGCTAAATAAGTGTCTAGGGGTCTGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| 3UTR GCA 72 bp | CTGGACACAAGCAGCCCCGCCACAGACAGGCACCCCTaGACTCAGGTGATATCGGAACAGACGAACTTCACC | + |
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Preference number: 3 (lower is better) Translates to: LDTSSPATDRHP*TQVISEQTNFT Trigger: GGTGAAGTTCGTCTGTTCCGATATCACCTGAGTGCAGGGGTGCCTGTCTGTGGCGGGGCTGCTTGTGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| 3UTR TCA 72 bp | TGGCAAGCATACACTACCCGGTGTGTTCAGATGCTGTaGGGGAGGTATGGCGAACTCGAACCTGCCCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: WQAYTTRCVQML*GRYGELEPAQE Trigger: CTCTTGGGCAGGTTCGAGTTCGCCATACCTCCCTCACAGCATCTGAACACACCGGGTAGTGTATGCTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| 3UTR TCA 72 bp | GCGAACTCGAACCTGCCCAAGAGGGAACCCCAACGTTaGAGTAGATCTGGAGTAACTGTGCATCCGCATCCA | + |
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Preference number: 3 (lower is better) Translates to: ANSNLPKREPQR*SRSGVTVHPHP Trigger: TGGATGCGGATGCACAGTTACTCCAGATCTACTTCAACGTTGGGGTTCCCTCTTGGGCAGGTTCGAGTTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| 3UTR GCA 72 bp | TCAGATGCTGTGAGGGAGGTATGGCGAACTCGAACCTaGCCAAGAGGGAACCCCAACGTTGAAGTAGATCTG | + |
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Preference number: 3 (lower is better) Translates to: SDAVREVWRTRT*PRGNPNVEVDL Trigger: CAGATCTACTTCAACGTTGGGGTTCCCTCTTGGGCAGGTTCGAGTTCGCCATACCTCCCTCACAGCATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR TCA 90 bp | TTTAGCCACAGTCTGCCCCCTTCCCTTGCGGGCAACCTGTGTGAGCCCCCAGGGCTACTGCCCCTGGGGTaGGTTCCTGAGGCTTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: FSHSLPPSLAGNLCEPPGLLPLG*VPEASR Trigger: GCGGGAAGCCTCAGGAACTCACCCCAGGGGCAGTAG...CCCTGGGGGCTCACACAGGTTGCCCGCAAGGGAAGGGGGCAGACTGTGGCTAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR TCA 90 bp | CCTACCCAAAGCTCAGGTTCAGAAGAGCCCCCTAGAGGGGTCAGGCTGCGGCCTTGGCCACCTCCTCCATaGGTGAGCCCGCGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PTQSSGSEEPPRGVRLRPWPPPP*VSPRSP Trigger: AGGACTGCGCGGGCTCACTCATGGAGGAGGTGGCCA...AGGCCGCAGCCTGACCCCTCTAGGGGGCTCTTCTGAACCTGAGCTTTGGGTAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | CACACCCATCCTACCCAAAGCTCAGGTTCAGAAGAGCCCCCTAGAGGGGTCAGGTCCAGGTCCTGCCGGTaGTGCTCCGCCGCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHPTQSSGSEEPPRGVRSRSCR*CSAASS Trigger: GCTGGAGGCGGCGGAGCAGCACCGGCAGGACCTGGA...CCTGACCCCTCTAGGGGGCTCTTCTGAACCTGAGCTTTGGGTAGGATGGGTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | CTACCCGGTGTGTTCAGATGCTGTGAGGGAGGTATGGCGAACTCGAACCTGCCCGTCCGCTGCGCACCCTaGCGCAGGTCCTCTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LPGVFRCCEGGMANSNLPVRCAP*RRSSAC Trigger: GCAGGCAGAGGACCTGCGGCAGGGTGCGCAGCGGAC...GGGCAGGTTCGAGTTCGCCATACCTCCCTCACAGCATCTGAACACACCGGGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | TTAGCCACAGTCTGCCCCCTTCCCTTGCGGGCAACCTGTGTGAGCCCCCAGGGCTGCAGGACTCCACTCTaGTCCTGGAAGCTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LATVCPLPLRATCVSPQGCRTPL*SWKLAQ Trigger: CTGGGCCAGCTTCCAGGAGCAGAGTGGAGTCCTGCA...GCCCTGGGGGCTCACACAGGTTGCCCGCAAGGGAAGGGGGCAGACTGTGGCTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR GCA 90 bp | TTAGCCACAGTCTGCCCCCTTCCCTTGCGGGCAACCTGTGTGAGCCCCCAGGGCAGCCTCCAGCGCAGCTaGTGCCTCCATCACTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LATVCPLPLRATCVSPQGSLQRS*CLHHFP Trigger: GGGAAAGTGATGGAGGCAGCAGCTGCGCTGGAGGCT...GCCCTGGGGGCTCACACAGGTTGCCCGCAAGGGAAGGGGGCAGACTGTGGCTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR TCA 90 bp | CTACCCGGTGTGTTCAGATGCTGTGAGGGAGGTATGGCGAACTCGAACCTGCCCTCAGCGCCCACAGCCTaGGGCTTCCCGCGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LPGVFRCCEGGMANSNLPSAPTA*GFPRLY Trigger: GTACAGGCGCGGGAAGCCTCAGGCTGTGGGCGCTGA...GGGCAGGTTCGAGTTCGCCATACCTCCCTCACAGCATCTGAACACACCGGGTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | AGTGAGGCCAGACCCCTAGACACTTATTTAGCCACAGTCTGCCCCCTTCCCTTGGTCCGCTGCGCACCCTaGCGCAGGTCCTCTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SEARPLDTYLATVCPLPLVRCAP*RRSSAC Trigger: GCAGGCAGAGGACCTGCGGCAGGGTGCGCAGCGGAC...CAAGGGAAGGGGGCAGACTGTGGCTAAATAAGTGTCTAGGGGTCTGGCCTCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR GCA 90 bp | CCTACCCAAAGCTCAGGTTCAGAAGAGCCCCCTAGAGGGGTCAGGCTGCGGCCTTTCCCCTGCAGCTCCTaGAGGACTCCACTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PTQSSGSEEPPRGVRLRPFPCSS*RTPLCS Trigger: GGAGCAGAGTGGAGTCCTGCAGGAGCTGCAGGGGAA...AGGCCGCAGCCTGACCCCTCTAGGGGGCTCTTCTGAACCTGAGCTTTGGGTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | CAACCCCATGACAGCCCAGCCTGGCTAGGCAGTGAGGCCAGACCCCTAGACACTCTGCCGCAGGTCCTCTaGCTGCATGCTGAATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QPHDSPAWLGSEARPLDTLPQVL*LHAEFG Trigger: GCCAAATTCAGCATGCAGGCAGAGGACCTGCGGCAG...AGTGTCTAGGGGTCTGGCCTCACTGCCTAGCCAGGCTGGGCTGTCATGGGGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR TCA 90 bp | AGTGAGGCCAGACCCCTAGACACTTATTTAGCCACAGTCTGCCCCCTTCCCTTGTGGCCACCTCCTCCATaGGTGAGCCCGCGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SEARPLDTYLATVCPLPLWPPPP*VSPRSP Trigger: AGGACTGCGCGGGCTCACTCATGGAGGAGGTGGCCA...CAAGGGAAGGGGGCAGACTGTGGCTAAATAAGTGTCTAGGGGTCTGGCCTCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR GCA 90 bp | CACACCCATCCTACCCAAAGCTCAGGTTCAGAAGAGCCCCCTAGAGGGGTCAGGCTCCAGCGCAGCTGCTaGCTCCATCACTTTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: HTHPTQSSGSEEPPRGVRLQRSC*LHHFPL Trigger: CAGGGGAAAGTGATGGAGGCAGCAGCTGCGCTGGAG...CCTGACCCCTCTAGGGGGCTCTTCTGAACCTGAGCTTTGGGTAGGATGGGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | GAAAATAATCCACCCACTACGGAGGGGACCCGACAGGCCAGCACCCACACCCATAGCCTCCAGCGCAGCTaGTGCCTCCATCACTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ENNPPTTEGTRQASTHTHSLQRS*CLHHFP Trigger: GGGAAAGTGATGGAGGCAGCAGCTGCGCTGGAGGCT...ATGGGTGTGGGTGCTGGCCTGTCGGGTCCCCTCCGTAGTGGGTGGATTATTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | AGCCCAGCCTGGCTAGGCAGTGAGGCCAGACCCCTAGACACTTATTTAGCCACACTCCAGCGCAGCTGCTaGCTCCATCACTTTCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPAWLGSEARPLDTYLATLQRSC*LHHFPL Trigger: CAGGGGAAAGTGATGGAGGCAGCAGCTGCGCTGGAG...TGTGGCTAAATAAGTGTCTAGGGGTCTGGCCTCACTGCCTAGCCAGGCTGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGGCCAGACCCCTAGACACTTATTTAGCCACAGTCTGCCCCCTTCCCTTGTTCCCCTGCAGCTCCTaGAGGACTCCACTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SEARPLDTYLATVCPLPLFPCSS*RTPLCS Trigger: GGAGCAGAGTGGAGTCCTGCAGGAGCTGCAGGGGAA...CAAGGGAAGGGGGCAGACTGTGGCTAAATAAGTGTCTAGGGGTCTGGCCTCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232167.2 |
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| CDS-3UTR GCA 90 bp | ATCTGGAGTAACTGTGCATCCGCATCCAGGGAAAATAATCCACCCACTACGGAGTGCAGGACTCCACTCTaGTCCTGGAAGCTGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: IWSNCASASRENNPPTTECRTPL*SWKLAQ Trigger: CTGGGCCAGCTTCCAGGAGCAGAGTGGAGTCCTGCA...CTCCGTAGTGGGTGGATTATTTTCCCTGGATGCGGATGCACAGTTACTCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR CCA 90 bp | ATAATCCACCCACTACGGAGGGGACCCGACAGGCCAGCACCCACACCCATCCTAAGTAGAAAAGCTGACTaGACAGTTCCTCCCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: IIHPLRRGPDRPAPTPILSRKAD*TVPPTV Trigger: AACAGTGGGAGGAACTGTCCAGTCAGCTTTTCTACT...TAGGATGGGTGTGGGTGCTGGCCTGTCGGGTCCCCTCCGTAGTGGGTGGATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | TCAGGTGATATCGGAACAGACGAACTTCACCCCCACCCTTTTCATATAAGCAGGTTGTCCTTCTGCAGCTaGAGCAGCTGCTCCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SGDIGTDELHPHPFHISRLSFCS*SSCSCG Trigger: GCCGCAGGAGCAGCTGCTGCAGCTGCAGAAGGACAA...CCTGCTTATATGAAAAGGGTGGGGGTGAAGTTCGTCTGTTCCGATATCACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | TATCGGAACAGACGAACTTCACCCCCACCCTTTTCATATAAGCAGGCACCCAGATCTCGGTTGTCCTTCTaGAGCTGCAGCAGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: YRNRRTSPPPFSYKQAPRSRLSF*SCSSCS Trigger: GGAGCAGCTGCTGCAGCTGCAGAAGGACAACCGAGA...TCTGGGTGCCTGCTTATATGAAAAGGGTGGGGGTGAAGTTCGTCTGTTCCGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS-3UTR GCA 90 bp | GATATCGGAACAGACGAACTTCACCCCCACCCTTTTCATATAAGCAGGCACCCACTGCCGCAGGTCCTCTaGCTGCATGCTGAATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: DIGTDELHPHPFHISRHPLPQVL*LHAEFG Trigger: GCCAAATTCAGCATGCAGGCAGAGGACCTGCGGCAG...TGGGTGCCTGCTTATATGAAAAGGGTGGGGGTGAAGTTCGTCTGTTCCGATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS TCA 90 bp | GCGGGAGCAGCAGCAACGTCTGCAGTGCGCTCAGCGCCCACAGCCTaGGGCTTCCCGCGCCTGTACCACCGAACAGTCGCTTTTCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: AGAAATSAVRSAPTA*GFPRLYHRTVAFRS Trigger: ACTGCGAAAAGCGACTGTTCGGTGGTACAGGCGCGGGAAGCCTCAGGCTGTGGGCGCTGAGCGCACTGCAGACGTTGCTGCTGCTCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS TCA 90 bp | CACCGAACAGTCGCTTTTCGCAGTCAGCCCTGGCCACCTCCTCCATaGGTGAGCCCGCGCAGTCCTGCACCGGACGAGGCTCTGAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: HRTVAFRSQPWPPPP*VSPRSPAPDEALSS Trigger: GGAACTCAGAGCCTCGTCCGGTGCAGGACTGCGCGGGCTCACTCATGGAGGAGGTGGCCAGGGCTGACTGCGAAAAGCGACTGTTCGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164950.11 ENSMUST00000232167.2 ENSMUST00000232364.2 |
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| CDS-3UTR CAA 90 bp | CTACCCGGTGTGTTCAGATGCTGTGAGGGAGGTATGGCGAACTCGAACCTGCCCAGGCGGCCATCTCGGTaGTCCTTCTGCAGCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LPGVFRCCEGGMANSNLPRRPSR*SFCSCS Trigger: GCTGCAGCTGCAGAAGGACAACCGAGATGGCCGCCT...GGGCAGGTTCGAGTTCGCCATACCTCCCTCACAGCATCTGAACACACCGGGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS CCA 90 bp | TGGCTGTGCGGTGAGCCCATGGGCAATGTGGAAGGGATATCAAGGTaGGAGAGAGTACTCATGCCCTGGAGGGAGCCAGGCTTAGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: WLCGEPMGNVEGISR*ERVLMPWREPGLVA Trigger: TGCCACTAAGCCTGGCTCCCTCCAGGGCATGAGTACTCTCTCCCACCTTGATATCCCTTCCACATTGCCCATGGGCTCACCGCACAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232364.2 |
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| CDS CCA 90 bp | CTCGCTGTTGACTTAGCTGCTCCCCTCCATAGTAGAAAAGCTGACTaGACAGTTCCTCCCACTGTTCCTGCAGCTTCCGATTGTGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: LAVDLAAPLHSRKAD*TVPPTVPAASDCVA Trigger: AGCAACACAATCGGAAGCTGCAGGAACAGTGGGAGGAACTGTCCAGTCAGCTTTTCTACTATGGAGGGGAGCAGCTAAGTCAACAGCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS GCA 72 bp | TGGCTCGTGATGCTTGACTTCGTCTCCGCTGCAGGCTaGGCTCGCGCTCCCGCAGCTCCTCCAGGCGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: WLVMLDFVSAAG*ARAPAAPPGAR Trigger: CCGGGCGCCTGGAGGAGCTGCGGGAGCGCGAGCGCAGCCTGCAGCGGAGACGAAGTCAAGCATCACGAGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS TCA 72 bp | GTCGCTTTTCGCAGTCAGCCCTGGCCACCTCCTCCATaGGTGAGCCCGCGCAGTCCTGCACCGGACGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VAFRSQPWPPPP*VSPRSPAPDEA Trigger: AGCCTCGTCCGGTGCAGGACTGCGCGGGCTCACTCATGGAGGAGGTGGCCAGGGCTGACTGCGAAAAGCGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164950.11 ENSMUST00000232167.2 ENSMUST00000232364.2 |
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| CDS TCA 72 bp | GCAGCAACGTCTGCAGTGCGCTCAGCGCCCACAGCCTaGGGCTTCCCGCGCCTGTACCACCGAACAGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: AATSAVRSAPTA*GFPRLYHRTVA Trigger: AGCGACTGTTCGGTGGTACAGGCGCGGGAAGCCTCAGGCTGTGGGCGCTGAGCGCACTGCAGACGTTGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS GCA 72 bp | AGCACCAGGAAACCCAGCGGGAGCAGCAGCAACGTCTaGAGTGCGCTCAGCGCCCACAGCCTGAGGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: STRKPSGSSSNV*SALSAHSLRLP Trigger: GGGAAGCCTCAGGCTGTGGGCGCTGAGCGCACTGCAGACGTTGCTGCTGCTCCCGCTGGGTTTCCTGGTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS GCA 72 bp | AGTTCCTCCCACTGTTCCTGCAGCTTCCGATTGTGTTaGTCCAGGTCCTGCCGGTGCTGCTCCGCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSHCSCSFRLC*SRSCRCCSAAS Trigger: GGAGGCGGCGGAGCAGCACCGGCAGGACCTGGAGCAACACAATCGGAAGCTGCAGGAACAGTGGGAGGAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS CAA 72 bp | CTGGACAGTTCCTCCCACTGTTCCTGCAGCTTCCGATaGTGTTGCTCCAGGTCCTGCCGGTGCTGCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LDSSSHCSCSFR*CCSRSCRCCSA Trigger: GGCGGAGCAGCACCGGCAGGACCTGGAGCAACACAATCGGAAGCTGCAGGAACAGTGGGAGGAACTGTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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| CDS CCA 72 bp | GAAGGGATATCAAGGTGGGAGAGAGTACTCATGCCCTaGAGGGAGCCAGGCTTAGTGGCACTGAGGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: EGISRWERVLMP*REPGLVALRLP Trigger: GGGAAGCCTCAGTGCCACTAAGCCTGGCTCCCTCCAGGGCATGAGTACTCTCTCCCACCTTGATATCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232364.2 |
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| CDS CCA 72 bp | AGGTTATCTGGCTGTGCGGTGAGCCCATGGGCAATGTaGAAGGGATATCAAGGTGGGAGAGAGTACTCATGC | + |
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Preference number: 6 (lower is better) Translates to: RLSGCAVSPWAM*KGYQGGREYSC Trigger: GCATGAGTACTCTCTCCCACCTTGATATCCCTTCCACATTGCCCATGGGCTCACCGCACAGCCAGATAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232364.2 |
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| CDS CCA 72 bp | GACTTAGCTGCTCCCCTCCATAGTAGAAAAGCTGACTaGACAGTTCCTCCCACTGTTCCTGCAGCTTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: DLAAPLHSRKAD*TVPPTVPAASD Trigger: ATCGGAAGCTGCAGGAACAGTGGGAGGAACTGTCCAGTCAGCTTTTCTACTATGGAGGGGAGCAGCTAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164950.11 |
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