Pregenerated sensors for TMEM19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069520Ensembl transcript IDs: ENSMUST00000092170.7, ENSMUST00000217848.2, ENSMUST00000217884.2, ENSMUST00000217887.2, ENSMUST00000218731.2, ENSMUST00000219890.2, ENSMUST00000220336.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTCCCAATGGTTTCAGCTGCCCTGCTTCCCCGATGCCAACCCTTaGGGGCTCCATCAGGAGCTGAGCCGTCCATGCTCTATGCACACT | + |
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Preference number: 1 (lower is better) Translates to: LSQWFQLPCFPDANP*GLHQELSRPCSMHT Trigger: AGTGTGCATAGAGCATGGACGGCTCAGCTCCTGATGGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGCAGCTGAAACCATTGGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR TCA 90 bp | TACAACCTGCCAGAATCTGTTCTCTCCTTCTACCACGTGGTTGTTTaGGGGGACAGTTCCATAGTGGGACAGGCAGGGCAGCGGAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: YNLPESVLSFYHVVV*GDSSIVGQAGQRKL Trigger: AAGCTTCCGCTGCCCTGCCTGTCCCACTATGGAACTGTCCCCTCAAACAACCACGTGGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
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| 3UTR GCA 90 bp | ATCAGAAAGGCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTaGTTTCCCAATGGTTTCAGCTGCCCTGCTTCCCCGATGCCAACC | + |
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Preference number: 1 (lower is better) Translates to: IRKAENKTCCSVPIN*FPNGFSCPASPMPT Trigger: GGTTGGCATCGGGGAAGCAGGGCAGCTGAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGCCTTTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR TCA 90 bp | ATGGTGATGACACCCGCTCATGAAGTCAAACATAAGGAAGACAGATaGACAGACCCTAGAATCTGCATGGTCAGAAGATGGCAGCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: MVMTPAHEVKHKEDR*TDPRICMVRRWQLS Trigger: GGAGAGCTGCCATCTTCTGACCATGCAGATTCTAGGGTCTGTTCATCTGTCTTCCTTATGTTTGACTTCATGAGCGGGTGTCATCACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTaGTTGCCAGGACAGTTCATTCTCATGGTGATGACACCCGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: TVFGVFRACCYLSGT*LPGQFILMVMTPAH Trigger: ATGAGCGGGTGTCATCACCATGAGAATGAACTGTCCTGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CCA 90 bp | AAGTCAAACATAAGGAAGACAGATGAACAGACCCTAGAATCTGCATaGTCAGAAGATGGCAGCTCTCCAGACTTTCACGACAGTAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: KSNIRKTDEQTLESA*SEDGSSPDFHDSRG Trigger: ACCTCTACTGTCGTGAAAGTCTGGAGAGCTGCCATCTTCTGACCATGCAGATTCTAGGGTCTGTTCATCTGTCTTCCTTATGTTTGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CCA 90 bp | TTAGGCTCCAAAGGAGAGGAACGTAGGACCAAGAAGGCTCACAACTaGGAAATCACAGCACTTCTAGGCACTTACAAAATTAAGGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: LGSKGEERRTKKAHN*EITALLGTYKIKVK Trigger: TTTGACCTTAATTTTGTAAGTGCCTAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCCTTTGGAGCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CCA 90 bp | GCTTGGCCAGTCTGCCACTCCTGCTACAGTAAGTACCTGACTCATTaGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGAAATGCT | + |
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Preference number: 1 (lower is better) Translates to: AWPVCHSCYSKYLTH*FQTHECCFTQLRNA Trigger: AGCATTTCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTTACTGTAGCAGGAGTGGCAGACTGGCCAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR TCA 90 bp | CAAATGGGAACCATTCTAAATTGTCAACACACTGCTTTGAGAAGCTaGACAATAATATTTTACAGAGAACATCTGATATTACAGTTCGGC | + |
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Preference number: 1 (lower is better) Translates to: QMGTILNCQHTALRS*TIIFYREHLILQFG Trigger: GCCGAACTGTAATATCAGATGTTCTCTGTAAAATATTATTGTTCAGCTTCTCAAAGCAGTGTGTTGACAATTTAGAATGGTTCCCATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CAA 90 bp | GCTTTCCCAATGGTTTCAGCTGCCCTGCTTCCCCGATGCCAACCCTaGAGGGCTCCATCAGGAGCTGAGCCGTCCATGCTCTATGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: AFPMVSAALLPRCQP*RAPSGAEPSMLYAH Trigger: GTGTGCATAGAGCATGGACGGCTCAGCTCCTGATGGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGCAGCTGAAACCATTGGGAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CAA 90 bp | ATACAACCTGCCAGAATCTGTTCTCTCCTTCTACCACGTGGTTGTTaGAGGGGACAGTTCCATAGTGGGACAGGCAGGGCAGCGGAAGCT | + |
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Preference number: 2 (lower is better) Translates to: IQPARICSLLLPRGC*RGQFHSGTGRAAEA Trigger: AGCTTCCGCTGCCCTGCCTGTCCCACTATGGAACTGTCCCCTCAAACAACCACGTGGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAGCCCTGCTTCCCCGATaGCAACCCTTGAGGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PYIHRWLPETAKEIRKAEALLPR*QPLRAP Trigger: TGGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGC...TTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCAGCCGTCCATGCTCTATaGACACTGCTCCTCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TVFGVFRACCYLSGTWLPAVHAL*TLLLPC Trigger: ACAGGGGAGGAGCAGTGTGCATAGAGCATGGACGGC...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTGCCGTCCATGCTCTATaGACACTGCTCCTCCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASAVHAL*TLLLPC Trigger: ACAGGGGAGGAGCAGTGTGCATAGAGCATGGACGGC...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | ACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAACAGCCCTGCTTCCCCGATaGCAACCCTTGAGGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TYTDGCQKQQKKSERLKTALLPR*QPLRAP Trigger: TGGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGC...TGTTTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCAAGTAGAGGTGGGGGTTaGCATTTCTCTAGCCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TVFGVFRACCYLSGTWLPSRGGG*HFSSQD Trigger: GTCCTGGCTAGAGAAATGGCAACCCCCACCTCTACT...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTAAAAGGACGAGGAGCGTaGAGAAGCAATGCCTACATT | + |
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Preference number: 2 (lower is better) Translates to: GEERRTKKAHNWEITALLKGRGA*RSNAYI Trigger: AATGTAGGCATTGCTTCTCCACGCTCCTCGTCCTTT...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CAA 90 bp | GTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTaGCCAGGACAGTTCATTCTCATGGTGATGACACCCGCTCATGAA | + |
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Preference number: 2 (lower is better) Translates to: VFGVFRACCYLSGTW*PGQFILMVMTPAHE Trigger: TTCATGAGCGGGTGTCATCACCATGAGAATGAACTGTCCTGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAATGGGCAGTCCTCTGGTaGTATAACCGCCAACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: PYIHRWLPETAKEIRKAEWAVLW*YNRQLR Trigger: CCTAAGTTGGCGGTTATATCACCAGAGGACTGCCCA...TTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCTGGGCAGTCCTCTGGTaGTATAACCGCCAACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: AENKTCCSVPINCFPNGFWAVLW*YNRQLR Trigger: CCTAAGTTGGCGGTTATATCACCAGAGGACTGCCCA...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGTTTACATTTAGTACGTGTGTGCGAGTGTGTGTGTGTTCATAAGTGTGAAAGGGCAGCGGAAGCTTaGAGGAGCTGGTCTCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: YCLHLVRVCECVCVHKCERAAEA*RSWSRC Trigger: GCAGCGAGACCAGCTCCTTCAAGCTTCCGCTGCCCT...TTCACACTTATGAACACACACACACTCGCACACACGTACTAAATGTAAACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTAGTAGAGGTGGGGGTTaGCATTTCTCTAGCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASSRGGG*HFSSQD Trigger: GTCCTGGCTAGAGAAATGGCAACCCCCACCTCTACT...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCACAACTGCTTTCCCAATaGTTTCAGCTGCCCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TVFGVFRACCYLSGTWLPQLLSQ*FQLPCF Trigger: GAAGCAGGGCAGCTGAAACCATTGGGAAAGCAGTTG...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR TCA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAATGGGCAGTCCTCTGGTaGTATAACCGCCAACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: PTYTDGCQKQQKKSERLKWAVLW*YNRQLR Trigger: CCTAAGTTGGCGGTTATATCACCAGAGGACTGCCCA...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTACTTACCAGTATCGACTaGTTGGGAAGGAAAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: GEERRTKKAHNWEITALLLTSID*LGRKRK Trigger: CTTTCTTTTCCTTCCCAAGCAGTCGATACTGGTAAG...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTAAGCGTGGAGAAGCAATaGCTACATTTTTCACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: GEERRTKKAHNWEITALLSVEKQ*LHFSQL Trigger: CAACTGTGAAAAATGTAGGCATTGCTTCTCCACGCT...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGAGCCCTGCTTCCCCGATaGCAACCCTTGAGGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KYLTHWFQTHECCFTQLRALLPR*QPLRAP Trigger: TGGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGC...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCAAGCAGGTCTAACTTTTaGGCCACTGTCATAGCGGTA | + |
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Preference number: 2 (lower is better) Translates to: TVFGVFRACCYLSGTWLPSRSNF*ATVIAV Trigger: TACCGCTATGACAGTGGCCCAAAAGTTAGACCTGCT...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CAA 90 bp | ATTAAGCTGCACACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTaGTCTGGGACGTGGTTGCCAGGACAGTTCATTCTCATGGTGATG | + |
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Preference number: 2 (lower is better) Translates to: IKLHTVFGVFRACCY*SGTWLPGQFILMVM Trigger: CATCACCATGAGAATGAACTGTCCTGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGTGTGCAGCTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTATTTACAGAGAACATCTaGTATTACAGTTCGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: GEERRTKKAHNWEITALLFTENI*YYSSAT Trigger: TGTGGCCGAACTGTAATATCAGATGTTCTCTGTAAA...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCATCTGTTCCCATCAACTaGTTTCCCAATGGTTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TVFGVFRACCYLSGTWLPSVPIN*FPNGFS Trigger: GCTGAAACCATTGGGAAAGCAGTTGATGGGAACAGA...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTAGCAGGTCTAACTTTTaGGCCACTGTCATAGCGGTA | + |
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Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASSRSNF*ATVIAV Trigger: TACCGCTATGACAGTGGCCCAAAAGTTAGACCTGCT...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCAAAAAACCTTTCACATTaGAAGTCTGGCTGGCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: TVFGVFRACCYLSGTWLPKNLSH*KSGWPY Trigger: GTAAGGCCAGCCAGACTTGCAATGTGAAAGGTTTTT...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAATCTGTTCCCATCAACTaGTTTCCCAATGGTTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PYIHRWLPETAKEIRKAESVPIN*FPNGFS Trigger: GCTGAAACCATTGGGAAAGCAGTTGATGGGAACAGA...TTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR CCA 90 bp | ACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAACACAACTGCTTTCCCAATaGTTTCAGCTGCCCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TYTDGCQKQQKKSERLKTQLLSQ*FQLPCF Trigger: GAAGCAGGGCAGCTGAAACCATTGGGAAAGCAGTTG...TGTTTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTCCCTACATACACAGATaGCTGCCAGAAACAGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASPYIHR*LPETAK Trigger: TTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR CAA 90 bp | CCCAGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTaGAGTATTTACAATACTCAGACCCGGCAGGAGTTAAGGTACCAG | + |
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Preference number: 2 (lower is better) Translates to: PRIYSQVNRTDSTIT*SIYNTQTRQELRYQ Trigger: CTGGTACCTTAACTCCTGCCGGGTCTGAGTATTGTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTAAAAACCTTTCACATTaGAAGTCTGGCTGGCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASKNLSH*KSGWPY Trigger: GTAAGGCCAGCCAGACTTGCAATGTGAAAGGTTTTT...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCAGCGTGGAGAAGCAATaGCTACATTTTTCACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: AENKTCCSVPINCFPNGFSVEKQ*LHFSQL Trigger: CAACTGTGAAAAATGTAGGCATTGCTTCTCCACGCT...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCAACATACACAGATGGCTaGCAGAAACAGCAAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: TVFGVFRACCYLSGTWLPTYTDG*QKQQKK Trigger: TTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAACAAGCAGGTCTAACTTTTaGGCCACTGTCATAGCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: TYTDGCQKQQKKSERLKTSRSNF*ATVIAV Trigger: TACCGCTATGACAGTGGCCCAAAAGTTAGACCTGCT...TGTTTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTAAGAAGGCTCACAACTaGGAAATCACAGCACTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASKKAHN*EITALL Trigger: TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTT...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTTTTACAGAGAACATCTaGTATTACAGTTCGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASFTENI*YYSSAT Trigger: TGTGGCCGAACTGTAATATCAGATGTTCTCTGTAAA...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACAGTAGAGGTGGGGGTTaGCATTTCTCTAGCCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYSRGGG*HFSSQD Trigger: GTCCTGGCTAGAGAAATGGCAACCCCCACCTCTACT...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTACATTATTTTTCCAGTaGCTCATTAACTTCCACACG | + |
|
Preference number: 2 (lower is better) Translates to: RNAGIITVLRNSGSHLASTLFFQ*LINFHT Trigger: CGTGTGGAAGTTAATGAGTCACTGGAAAAATAATGT...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACAGCAGGTCTAACTTTTaGGCCACTGTCATAGCGGTA | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYSRSNF*ATVIAV Trigger: TACCGCTATGACAGTGGCCCAAAAGTTAGACCTGCT...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGAAAAGGACGAGGAGCGTaGAGAAGCAATGCCTACATT | + |
|
Preference number: 2 (lower is better) Translates to: KYLTHWFQTHECCFTQLRKGRGA*RSNAYI Trigger: AATGTAGGCATTGCTTCTCCACGCTCCTCGTCCTTT...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACCATAAGGAAGACAGATaGACAGACCCTAGAATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYHKEDR*TDPRIC Trigger: GCAGATTCTAGGGTCTGTTCATCTGTCTTCCTTATG...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAATATTTTACAGAGAACATCTGATATTACAGTTCGGCCACAGAGGGAAAGAGCTTACCAGTATCGACTaGTTGGGAAGGAAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: IIFYREHLILQFGHRGKELTSID*LGRKRK Trigger: CTTTCTTTTCCTTCCCAAGCAGTCGATACTGGTAAG...CTCTTTCCCTCTGTGGCCGAACTGTAATATCAGATGTTCTCTGTAAAATATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACTCTGTTCCCATCAACTaGTTTCCCAATGGTTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYSVPIN*FPNGFS Trigger: GCTGAAACCATTGGGAAAGCAGTTGATGGGAACAGA...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGACCCTACATACACAGATaGCTGCCAGAAACAGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KYLTHWFQTHECCFTQLRPYIHR*LPETAK Trigger: TTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACCCCTACATACACAGATaGCTGCCAGAAACAGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYPYIHR*LPETAK Trigger: TTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR CAA 90 bp | TACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATaGAGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: YLTHWFQTHECCFTQ*RNAGIITVLRNSGS Trigger: GCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACCTTACCAGTATCGACTaGTTGGGAAGGAAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYLTSID*LGRKRK Trigger: CTTTCTTTTCCTTCCCAAGCAGTCGATACTGGTAAG...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACAGCGTGGAGAAGCAATaGCTACATTTTTCACAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYSVEKQ*LHFSQL Trigger: CAACTGTGAAAAATGTAGGCATTGCTTCTCCACGCT...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCTTAAAATTATTGTTTACATTTAGTACGTGTGTGCGAGTGTGTGTGTGTTCATGCATCAGTATCGACTaGTTGGGAAGGAAAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VLKLLFTFSTCVRVCVCSCISID*LGRKRK Trigger: CTTTCTTTTCCTTCCCAAGCAGTCGATACTGATGCA...TGAACACACACACACTCGCACACACGTACTAAATGTAAACAATAATTTTAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGATTTACAGAGAACATCTaGTATTACAGTTCGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: KYLTHWFQTHECCFTQLRFTENI*YYSSAT Trigger: TGTGGCCGAACTGTAATATCAGATGTTCTCTGTAAA...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGAAGAAATCAGAAAGGCTaGAAACAAGACTTGCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: KYLTHWFQTHECCFTQLRRNQKG*KQDLLF Trigger: GAACAGCAAGTCTTGTTTTCAGCCTTTCTGATTTCT...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACAGAAATCAGAAAGGCTaGAAACAAGACTTGCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYRNQKG*KQDLLF Trigger: GAACAGCAAGTCTTGTTTTCAGCCTTTCTGATTTCT...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACACATACACAGATGGCTaGCAGAAACAGCAAAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYTYTDG*QKQQKK Trigger: TTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACGGGCTTCCATGTGTATaGGTTAAGTCATTTAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RIYSQVNRTDSTITLSIYGLPCV*VKSFKA Trigger: TGCTTTAAATGACTTAACCCATACACATGGAAGCCC...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGAACATTATTTTTCCAGTaGCTCATTAACTTCCACACG | + |
|
Preference number: 2 (lower is better) Translates to: KYLTHWFQTHECCFTQLRTLFFQ*LINFHT Trigger: CGTGTGGAAGTTAATGAGTCACTGGAAAAATAATGT...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR TCA 72 bp | TGGTTTCAGCTGCCCTGCTTCCCCGATGCCAACCCTTaGGGGCTCCATCAGGAGCTGAGCCGTCCATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: WFQLPCFPDANP*GLHQELSRPCS Trigger: AGAGCATGGACGGCTCAGCTCCTGATGGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGCAGCTGAAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR GCA 72 bp | TCTGTTCCCATCAACTGCTTTCCCAATGGTTTCAGCTaGCCTGCTTCCCCGATGCCAACCCTTGAGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SVPINCFPNGFS*PASPMPTLEGS Trigger: GGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGCAGCTGAAACCATTGGGAAAGCAGTTGATGGGAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR TCA 72 bp | GCGGGCAGGCAACAGTCTTACTGGGCAGTCCTCTGGTaGTATAACCGCCAACTTAGGCTCCAAAGGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AGRQQSYWAVLW*YNRQLRLQRRG Trigger: TCCTCTCCTTTGGAGCCTAAGTTGGCGGTTATATCACCAGAGGACTGCCCAGTAAGACTGTTGCCTGCCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR TCA 72 bp | CCAGAATCTGTTCTCTCCTTCTACCACGTGGTTGTTTaGGGGGACAGTTCCATAGTGGGACAGGCAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PESVLSFYHVVV*GDSSIVGQAGQ Trigger: CTGCCCTGCCTGTCCCACTATGGAACTGTCCCCTCAAACAACCACGTGGTAGAAGGAGAGAACAGATTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
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| 3UTR CCA 72 bp | TTGCACTGGAAAAGAGAACAGGGTAGGGGTCCTGCTTaGCCAGTCTGCCACTCCTGCTACAGTAAGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LHWKREQGRGPA*PVCHSCYSKYL Trigger: CAGGTACTTACTGTAGCAGGAGTGGCAGACTGGCCAAGCAGGACCCCTACCCTGTTCTCTTTTCCAGTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR GCA 72 bp | CAGGGTAGGGGTCCTGCTTGGCCAGTCTGCCACTCCTaGTACAGTAAGTACCTGACTCATTGGTTTCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QGRGPAWPVCHS*YSKYLTHWFQT Trigger: AGTTTGAAACCAATGAGTCAGGTACTTACTGTAGCAGGAGTGGCAGACTGGCCAAGCAGGACCCCTACCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTGAACGTCATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTCAGGGCAGCGGAAGCTaGAAGGAGCTGGTCTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KCERHRGQNTTCQNLFSPQGSGS*KELVSL Trigger: CAGCGAGACCAGCTCCTTCAAGCTTCCGCTGCCCTG...AGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTATGACGTTCACACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| 3UTR GCA 72 bp | AGCTCTCCAGACTTTCACGACAGTAGAGGTGGGGGTTaGCATTTCTCTAGCCAGGACCCTACATACACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SSPDFHDSRGGG*HFSSQDPTYTD Trigger: ATCTGTGTATGTAGGGTCCTGGCTAGAGAAATGGCAACCCCCACCTCTACTGTCGTGAAAGTCTGGAGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR CCA 72 bp | AGAGCGGCTCCGTTGTTCATGAAGCTTCATCCACAGTaGATAAATGTGGACAACTTGTACGCACTTCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: RAAPLFMKLHPQ*INVDNLYALPA Trigger: AGCGGGAAGTGCGTACAAGTTGTCCACATTTATCCACTGTGGATGAAGCTTCATGAACAACGGAGCCGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR CCA 72 bp | ATAAGGAAGACAGATGAACAGACCCTAGAATCTGCATaGTCAGAAGATGGCAGCTCTCCAGACTTTCACGAC | + |
|
Preference number: 3 (lower is better) Translates to: IRKTDEQTLESA*SEDGSSPDFHD Trigger: GTCGTGAAAGTCTGGAGAGCTGCCATCTTCTGACCATGCAGATTCTAGGGTCTGTTCATCTGTCTTCCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR CCA 72 bp | GGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTaGTTGCCAGGACAGTTCATTCTCATGGTGATGACA | + |
|
Preference number: 3 (lower is better) Translates to: GVFRACCYLSGT*LPGQFILMVMT Trigger: TGTCATCACCATGAGAATGAACTGTCCTGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR TCA 72 bp | ACACCCGCTCATGAAGTCAAACATAAGGAAGACAGATaGACAGACCCTAGAATCTGCATGGTCAGAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: TPAHEVKHKEDR*TDPRICMVRRW Trigger: CCATCTTCTGACCATGCAGATTCTAGGGTCTGTTCATCTGTCTTCCTTATGTTTGACTTCATGAGCGGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR GCA 72 bp | TACCGTGCACCCGAGGCAAGTGCTATCACTGAGCTATaGCTTCATCCCAATGGTGCAAATTTATATGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: YRAPEASAITEL*LHPNGANLYDF Trigger: GAAATCATATAAATTTGCACCATTGGGATGAAGGCATAGCTCAGTGATAGCACTTGCCTCGGGTGCACGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR GCA 72 bp | CATAAGTGTGAACGTCATAGAGGTCAGAATACAACCTaGCAGAATCTGTTCTCTCCTTCTACCACGTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: HKCERHRGQNTT*QNLFSPSTTWL Trigger: CAACCACGTGGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTATGACGTTCACACTTATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| 3UTR CCA 72 bp | AATGACGTCATTAACTGGGAGAAAGGACGAGGAGCGTaGAGAAGCAATGCCTACATTTTTCACAGTTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NDVINWEKGRGA*RSNAYIFHSCD Trigger: GTCACAACTGTGAAAAATGTAGGCATTGCTTCTCCACGCTCCTCGTCCTTTCTCCCAGTTAATGACGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR GCA 72 bp | ACAGCAAAAGAAATCAGAAAGGCTGAAAACAAGACTTaGTGTTCTGTTCCCATCAACTGCTTTCCCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TAKEIRKAENKT*CSVPINCFPNG Trigger: ACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGCCTTTCTGATTTCTTTTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR TCA 72 bp | CGCTTCCCCCAGAATATACTCCCAGGTCAACCGAACTaGTTCAACAATTACTTTGAGTATTTACAATACTCA | + |
|
Preference number: 3 (lower is better) Translates to: RFPQNILPGQPN*FNNYFEYLQYS Trigger: TGAGTATTGTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCTGGGGGAAGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR CAA 72 bp | ATGGTTTCAGCTGCCCTGCTTCCCCGATGCCAACCCTaGAGGGCTCCATCAGGAGCTGAGCCGTCCATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MVSAALLPRCQP*RAPSGAEPSML Trigger: GAGCATGGACGGCTCAGCTCCTGATGGAGCCCTCAAGGGTTGGCATCGGGGAAGCAGGGCAGCTGAAACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTAACCCCGACGCGGCTGTaGGGAGCAGGAGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GEERRTKKAHNWEITALLTPTRL*GAGGPP Trigger: TGGTGGCCCTCCTGCTCCCCACAGCCGCGTCGGGGT...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGTGGATAAATGTGGACAACTTGTACGCACTTCCCGCTCCACCAGGAAGGGGAGGCAAGTCCCACTaGTGTGACTCCTCCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQWINVDNLYALPAPPGRGGKSH*CDSSVG Trigger: ACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCC...CCTTCCTGGTGGAGCGGGAAGTGCGTACAAGTTGTCCACATTTATCCACTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGTGGATAAATGTGGACAACTTGTACGCACTTCCCGCTCCACCAGGAAGGATGTGCTTCGTCTCCTaGGTCGGGCTACTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PQWINVDNLYALPAPPGRMCFVS*VGLLTT Trigger: GGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACAT...CCTTCCTGGTGGAGCGGGAAGTGCGTACAAGTTGTCCACATTTATCCACTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTATGTCTCCAGCCGAGCTaGCCAGCGCAGCCAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GEERRTKKAHNWEITALLCLQPS*PAQPRE Trigger: CTCTCTTGGCTGCGCTGGCCAGCTCGGCTGGAGACA...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR CAA 72 bp | GCCAGAATCTGTTCTCTCCTTCTACCACGTGGTTGTTaGAGGGGACAGTTCCATAGTGGGACAGGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARICSLLLPRGC*RGQFHSGTGRA Trigger: TGCCCTGCCTGTCCCACTATGGAACTGTCCCCTCAAACAACCACGTGGTAGAAGGAGAGAACAGATTCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTAATGTGCTTCGTCTCCTaGGTCGGGCTACTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GEERRTKKAHNWEITALLMCFVS*VGLLTT Trigger: GGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACAT...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | CCACAGTGGATAAATGTGGACAACTTGTACGCACTTCCCGCTCCACCAGGAAGGGCCGAGGTGAGCTTTTaGTCAGAACTGGAGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PQWINVDNLYALPAPPGRAEVSF*SELEQL Trigger: AAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGC...CCTTCCTGGTGGAGCGGGAAGTGCGTACAAGTTGTCCACATTTATCCACTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCATACCGCCGAGGAGACTaGAGGCAAGTCCCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVFGVFRACCYLSGTWLPYRRGD*RQVPLL Trigger: CAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTA...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | GTCATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTTCTACCACGTTACCGCCGAGGAGACTaGAGGCAAGTCCCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIEVRIQPARICSLLLPRYRRGD*RQVPLL Trigger: CAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTA...ACGTGGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCAGGAGGCAAGTCCCACTaGTGTGACTCCTCCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVFGVFRACCYLSGTWLPGGKSH*CDSSVG Trigger: ACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCC...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTTACCGCCGAGGAGACTaGAGGCAAGTCCCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNAGIITVLRNSGSHLASYRRGD*RQVPLL Trigger: CAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTA...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCTACCGCCGAGGAGACTaGAGGCAAGTCCCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AENKTCCSVPINCFPNGFYRRGD*RQVPLL Trigger: CAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTA...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | ATAATATTTTACAGAGAACATCTGATATTACAGTTCGGCCACAGAGGGAAAGAGACCCCGACGCGGCTGTaGGGAGCAGGAGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IIFYREHLILQFGHRGKETPTRL*GAGGPP Trigger: TGGTGGCCCTCCTGCTCCCCACAGCCGCGTCGGGGT...CTCTTTCCCTCTGTGGCCGAACTGTAATATCAGATGTTCTCTGTAAAATATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | TATTGTTTACATTTAGTACGTGTGTGCGAGTGTGTGTGTGTTCATAAGTGTGAAACCCCGACGCGGCTGTaGGGAGCAGGAGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLVRVCECVCVHKCETPTRL*GAGGPP Trigger: TGGTGGCCCTCCTGCTCCCCACAGCCGCGTCGGGGT...TTCACACTTATGAACACACACACACTCGCACACACGTACTAAATGTAAACAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTAGCCGAGGTGAGCTTTTaGTCAGAACTGGAGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: GEERRTKKAHNWEITALLAEVSF*SELEQL Trigger: AAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGC...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCGGAGGCAAGTCCCACTaGTGTGACTCCTCCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AENKTCCSVPINCFPNGFGGKSH*CDSSVG Trigger: ACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCC...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | CCCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAGGAGGCAAGTCCCACTaGTGTGACTCCTCCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PYIHRWLPETAKEIRKAEGGKSH*CDSSVG Trigger: ACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCC...TTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCATGTGCTTCGTCTCCTaGGTCGGGCTACTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: AENKTCCSVPINCFPNGFMCFVS*VGLLTT Trigger: GGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACAT...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGTGAACGTCATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTATGTGCTTCGTCTCCTaGGTCGGGCTACTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KCERHRGQNTTCQNLFSPMCFVS*VGLLTT Trigger: GGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACAT...AGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTATGACGTTCACACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR GCA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAATGTGCTTCGTCTCCTaGGTCGGGCTACTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: PTYTDGCQKQQKKSERLKMCFVS*VGLLTT Trigger: GGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACAT...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTAGCTTTTGCTCAGAACTaGAGCAACTTCAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEERRTKKAHNWEITALLAFAQN*SNFRSP Trigger: TGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGC...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTTCTACCACGTGGTGCCGAGGTGAGCTTTTaGTCAGAACTGGAGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: IEVRIQPARICSLLLPRGAEVSF*SELEQL Trigger: AAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGC...ACCACGTGGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR TCA 90 bp | CCACAGTGGATAAATGTGGACAACTTGTACGCACTTCCCGCTCCACCAGGAAGGTTCCTCTCCATTTTGTaGGTTTTGAAGATGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PQWINVDNLYALPAPPGRFLSIL*VLKMKG Trigger: TCCTTTCATCTTCAAAACTCACAAAATGGAGAGGAA...CCTTCCTGGTGGAGCGGGAAGTGCGTACAAGTTGTCCACATTTATCCACTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | CCCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAGCAATAATGGGCCACTaGGGAGCAGAGATGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYIHRWLPETAKEIRKAEAIMGH*GAEMSK Trigger: CTTAGACATCTCTGCTCCGCAGTGGCCCATTATTGC...TTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTTGCCACCATTACAGAACACCTaGACCCAATTCCTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVFGVFRACCYLSGTWLPPLQNT*TQFLCP Trigger: AGGACAGAGGAATTGGGTCCAGGTGTTCTGTAATGG...TGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | ATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTTCTACCACGTGGTCCATTACAGAACACCTaGACCCAATTCCTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IEVRIQPARICSLLLPRGPLQNT*TQFLCP Trigger: AGGACAGAGGAATTGGGTCCAGGTGTTCTGTAATGG...ACCACGTGGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR CCA 90 bp | GTCATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTTCTACCACGTGCTTTTGCTCAGAACTaGAGCAACTTCAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VIEVRIQPARICSLLLPRAFAQN*SNFRSP Trigger: TGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGC...ACGTGGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| 3UTR CAA 72 bp | GTTTTTAGGGCATGTTGTTATTTGTCTGGGACGTGGTaGCCAGGACAGTTCATTCTCATGGTGATGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: VFRACCYLSGTW*PGQFILMVMTP Trigger: GGGTGTCATCACCATGAGAATGAACTGTCCTGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| 3UTR CAA 72 bp | CACACTGTGTTTGGGGTTTTTAGGGCATGTTGTTATTaGTCTGGGACGTGGTTGCCAGGACAGTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTVFGVFRACCY*SGTWLPGQFIL Trigger: GAGAATGAACTGTCCTGGCAACCACGTCCCAGACAAATAACAACATGCCCTAAAAACCCCAAACACAGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTACTAGGGAAATGCAAATaGTCAGGCTCAGTATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: GEERRTKKAHNWEITALLLGKCK*SGSVLL Trigger: TAGTAATACTGAGCCTGATCATTTGCATTTCCCTAG...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092170.7 ENSMUST00000217887.2 |
||
| CDS-3UTR GCA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAGCAATAATGGGCCACTaGGGAGCAGAGATGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTYTDGCQKQQKKSERLKAIMGH*GAEMSK Trigger: CTTAGACATCTCTGCTCCGCAGTGGCCCATTATTGC...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCCCATTACAGAACACCTaGACCCAATTCCTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AENKTCCSVPINCFPNGFPLQNT*TQFLCP Trigger: AGGACAGAGGAATTGGGTCCAGGTGTTCTGTAATGG...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATGCTGGGATCATTACAGTACTCAGAAATTCAGGTAGCCACCTGGCATCTGCTTTTGCTCAGAACTaGAGCAACTTCAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNAGIITVLRNSGSHLASAFAQN*SNFRSP Trigger: TGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGC...AGATGCCAGGTGGCTACCTGAATTTCTGAGTACTGTAATGATCCCAGCATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACTACCGCCGAGGAGACTaGAGGCAAGTCCCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIYSQVNRTDSTITLSIYYRRGD*RQVPLL Trigger: CAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTA...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAAATTATTGTTTACATTTAGTACGTGTGTGCGAGTGTGTGTGTGTTCAGGAGGCAAGTCCCACTaGTGTGACTCCTCCGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLKLLFTFSTCVRVCVCSGGKSH*CDSSVG Trigger: ACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCC...TGAACACACACACACTCGCACACACGTACTAAATGTAAACAATAATTTTAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR GCA 90 bp | ACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAACAGCAATAATGGGCCACTaGGGAGCAGAGATGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TYTDGCQKQQKKSERLKTAIMGH*GAEMSK Trigger: CTTAGACATCTCTGCTCCGCAGTGGCCCATTATTGC...TGTTTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAACCATTACAGAACACCTaGACCCAATTCCTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTYTDGCQKQQKKSERLKPLQNT*TQFLCP Trigger: AGGACAGAGGAATTGGGTCCAGGTGTTCTGTAATGG...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR CCA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAGCTTTTGCTCAGAACTaGAGCAACTTCAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTYTDGCQKQQKKSERLKAFAQN*SNFRSP Trigger: TGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGC...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR GCA 90 bp | GAACGTCATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTTCTACCTACTCTGAGTCCAGTTaGTTCTTTATGTTTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ERHRGQNTTCQNLFSPSTYSESS*FFMFPL Trigger: GAGAGGAAACATAAAGAAGCAACTGGACTCAGAGTA...GGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTATGACGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
||
| CDS-3UTR CCA 90 bp | ACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAACAGCTTTTGCTCAGAACTaGAGCAACTTCAGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TYTDGCQKQQKKSERLKTAFAQN*SNFRSP Trigger: TGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGC...TGTTTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
||
| CDS-3UTR TCA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCCTAGGGAAATGCAAATaGTCAGGCTCAGTATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: AENKTCCSVPINCFPNGFLGKCK*SGSVLL Trigger: TAGTAATACTGAGCCTGATCATTTGCATTTCCCTAG...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092170.7 ENSMUST00000217887.2 |
||
| CDS-3UTR GCA 90 bp | TATTGTTTACATTTAGTACGTGTGTGCGAGTGTGTGTGTGTTCATAAGTGTGAAGCAATAATGGGCCACTaGGGAGCAGAGATGTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YCLHLVRVCECVCVHKCEAIMGH*GAEMSK Trigger: CTTAGACATCTCTGCTCCGCAGTGGCCCATTATTGC...TTCACACTTATGAACACACACACACTCGCACACACGTACTAAATGTAAACAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
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| CDS-3UTR GCA 90 bp | ATAATATTTTACAGAGAACATCTGATATTACAGTTCGGCCACAGAGGGAAAGAGGCAATAATGGGCCACTaGGGAGCAGAGATGTCTAAG | + |
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Preference number: 4 (lower is better) Translates to: IIFYREHLILQFGHRGKEAIMGH*GAEMSK Trigger: CTTAGACATCTCTGCTCCGCAGTGGCCCATTATTGC...CTCTTTCCCTCTGTGGCCGAACTGTAATATCAGATGTTCTCTGTAAAATATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR GCA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAATACTCTGAGTCCAGTTaGTTCTTTATGTTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PTYTDGCQKQQKKSERLKYSESS*FFMFPL Trigger: GAGAGGAAACATAAAGAAGCAACTGGACTCAGAGTA...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR GCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACGCCGAGGTGAGCTTTTaGTCAGAACTGGAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: RIYSQVNRTDSTITLSIYAEVSF*SELEQL Trigger: AAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGC...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR TCA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAATTCCTCTCCATTTTGTaGGTTTTGAAGATGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: PTYTDGCQKQQKKSERLKFLSIL*VLKMKG Trigger: TCCTTTCATCTTCAAAACTCACAAAATGGAGAGGAA...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR GCA 90 bp | ACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAACATACTCTGAGTCCAGTTaGTTCTTTATGTTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TYTDGCQKQQKKSERLKTYSESS*FFMFPL Trigger: GAGAGGAAACATAAAGAAGCAACTGGACTCAGAGTA...TGTTTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR GCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGACAGGAAGCAGTGTGTTaGTTGGAAAAATCTATGGGC | + |
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Preference number: 4 (lower is better) Translates to: KYLTHWFQTHECCFTQLRQEAVC*LEKSMG Trigger: GCCCATAGATTTTTCCAAGCAACACACTGCTTCCTG...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR GCA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGATACTCTGAGTCCAGTTaGTTCTTTATGTTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KYLTHWFQTHECCFTQLRYSESS*FFMFPL Trigger: GAGAGGAAACATAAAGAAGCAACTGGACTCAGAGTA...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR TCA 90 bp | AGAATATACTCCCAGGTCAACCGAACTGATTCAACAATTACTTTGAGTATTTACTTCCTCTCCATTTTGTaGGTTTTGAAGATGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RIYSQVNRTDSTITLSIYFLSIL*VLKMKG Trigger: TCCTTTCATCTTCAAAACTCACAAAATGGAGAGGAA...GTAAATACTCAAAGTAATTGTTGAATCAGTTCGGTTGACCTGGGAGTATATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS GCA 90 bp | CAGGCCCACAAAGGTACCGCCGAGGAGACTGGAGGCAAGTCCCACTaGTGTGACTCCTCCGTTGGTTCCAACTGGAACTTTCTCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: QAHKGTAEETGGKSH*CDSSVGSNWNFLPG Trigger: ACCTGGGAGAAAGTTCCAGTTGGAACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTACCTTTGTGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS GCA 90 bp | GCGTTGTTATCCAGGATCGGTTTCCCCGCTATGTGCTTCGTCTCCTaGGTCGGGCTACTCACCACCAGGCCTGTGCGTTCATCCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: ALLSRIGFPAMCFVS*VGLLTTRPVRSSRP Trigger: TGGTCTGGATGAACGCACAGGCCTGGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACATAGCGGGGAAACCGATCCTGGATAACAACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CCA 90 bp | TTTCCCCGGGGCCGTTCTCTATCATGTAGAGCAGGGCCAGCTCTGTaGGCACGGCGCCATTACAGAACACCTGGACCCAATTCCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: FPRGRSLSCRAGPAL*ARRHYRTPGPNSSV Trigger: GACAGAGGAATTGGGTCCAGGTGTTCTGTAATGGCGCCGTGCCCACAGAGCTGGCCCTGCTCTACATGATAGAGAACGGCCCCGGGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS GCA 90 bp | AAGAGATTCACGGCGTTGTTATCCAGGATCGGTTTCCCCGCTATGTaGTTCGTCTCCTGCGTCGGGCTACTCACCACCAGGCCTGTGCGT | + |
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Preference number: 5 (lower is better) Translates to: KRFTALLSRIGFPAM*FVSCVGLLTTRPVR Trigger: ACGCACAGGCCTGGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACATAGCGGGGAAACCGATCCTGGATAACAACGCCGTGAATCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CCA 90 bp | TCAGAACTGGAGCAACTTCAGAAGCCCAGGTGTCTCCAGCCGAGCTaGCCAGCGCAGCCAAGAGAGACAAACACATCCAGGAAGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: SELEQLQKPRCLQPS*PAQPRETNTSRKQC Trigger: ACACTGCTTCCTGGATGTGTTTGTCTCTCTTGGCTGCGCTGGCCAGCTCGGCTGGAGACACCTGGGCTTCTGAAGTTGCTCCAGTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS GCA 90 bp | CAACTGGAACTTTCTCCCAGGTTGTTATTAGCCGAGGTGAGCTTTTaGTCAGAACTGGAGCAACTTCAGAAGCCCAGGTGTCTCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QLELSPRLLLAEVSF*SELEQLQKPRCLQP Trigger: CGGCTGGAGACACCTGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTCCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | CCACAGTGGATAAATGTGGACAACTTGTACGCACTTCCCGCTCCACCAGGAAGGCCAGGAAGCAGTGTGTaGCTTGGAAAAATCTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQWINVDNLYALPAPPGRPGSSV*LGKIYG Trigger: CCCATAGATTTTTCCAAGCAACACACTGCTTCCTGG...CCTTCCTGGTGGAGCGGGAAGTGCGTACAAGTTGTCCACATTTATCCACTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS GCA 90 bp | GATCCAAATAACCCAGCCACACCACCAAATGCAATAATGGGCCACTaGGGAGCAGAGATGTCTAAGTCGTTCACAAACACCAACTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DPNNPATPPNAIMGH*GAEMSKSFTNTNCV Trigger: TACACAGTTGGTGTTTGTGAACGACTTAGACATCTCTGCTCCGCAGTGGCCCATTATTGCATTTGGTGGTGTGGCTGGGTTATTTGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | GAACGTCATAGAGGTCAGAATACAACCTGCCAGAATCTGTTCTCTCCTTCTACCGAACTTTCTCCCAGGTaGTTATTAGCCGAGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: ERHRGQNTTCQNLFSPSTELSPR*LLAEVS Trigger: GCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTC...GGTAGAAGGAGAGAACAGATTCTGGCAGGTTGTATTCTGACCTCTATGACGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
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| CDS-3UTR CAA 90 bp | GGAGAGGAACGTAGGACCAAGAAGGCTCACAACTGGGAAATCACAGCACTTCTAGAAGCAGTGTGTTGCTaGGAAAAATCTATGGGCATT | + |
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Preference number: 5 (lower is better) Translates to: GEERRTKKAHNWEITALLEAVCC*EKSMGI Trigger: AATGCCCATAGATTTTTCCAAGCAACACACTGCTTC...TAGAAGTGCTGTGATTTCCCAGTTGTGAGCCTTCTTGGTCCTACGTTCCTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | TGCCAGAATCTGTTCTCTCCTTCTACCACGTGGTTGTTTGAGGGGACAGTTCCAGAAGCAGTGTGTTGCTaGGAAAAATCTATGGGCATT | + |
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Preference number: 5 (lower is better) Translates to: CQNLFSPSTTWLFEGTVPEAVCC*EKSMGI Trigger: AATGCCCATAGATTTTTCCAAGCAACACACTGCTTC...TGGAACTGTCCCCTCAAACAACCACGTGGTAGAAGGAGAGAACAGATTCTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218731.2 |
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| CDS-3UTR CAA 90 bp | CCCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAGAACTTTCTCCCAGGTaGTTATTAGCCGAGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PYIHRWLPETAKEIRKAEELSPR*LLAEVS Trigger: GCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTC...TTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | GCTGAAAACAAGACTTGCTGTTCTGTTCCCATCAACTGCTTTCCCAATGGTTTCGAACTTTCTCCCAGGTaGTTATTAGCCGAGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: AENKTCCSVPINCFPNGFELSPR*LLAEVS Trigger: GCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTC...GAAACCATTGGGAAAGCAGTTGATGGGAACAGAACAGCAAGTCTTGTTTTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | ACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAACAGAACTTTCTCCCAGGTaGTTATTAGCCGAGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TYTDGCQKQQKKSERLKTELSPR*LLAEVS Trigger: GCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTC...TGTTTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | CCTACATACACAGATGGCTGCCAGAAACAGCAAAAGAAATCAGAAAGGCTGAAAGAAGCAGTGTGTTGCTaGGAAAAATCTATGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PTYTDGCQKQQKKSERLKEAVCC*EKSMGI Trigger: AATGCCCATAGATTTTTCCAAGCAACACACTGCTTC...TTTCAGCCTTTCTGATTTCTTTTGCTGTTTCTGGCAGCCATCTGTGTATGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGAGAACTTTCTCCCAGGTaGTTATTAGCCGAGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KYLTHWFQTHECCFTQLRELSPR*LLAEVS Trigger: GCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTC...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS-3UTR CAA 90 bp | AAGTACCTGACTCATTGGTTTCAAACTCATGAATGTTGTTTCACACAATTGAGAGAAGCAGTGTGTTGCTaGGAAAAATCTATGGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: KYLTHWFQTHECCFTQLREAVCC*EKSMGI Trigger: AATGCCCATAGATTTTTCCAAGCAACACACTGCTTC...TCTCAATTGTGTGAAACAACATTCATGAGTTTGAAACCAATGAGTCAGGTACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000219890.2 |
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| CDS GCA 72 bp | TCCAGGATCGGTTTCCCCGCTATGTGCTTCGTCTCCTaGGTCGGGCTACTCACCACCAGGCCTGTGCGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SRIGFPAMCFVS*VGLLTTRPVRS Trigger: TGAACGCACAGGCCTGGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACATAGCGGGGAAACCGATCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS GCA 72 bp | ACGGCGTTGTTATCCAGGATCGGTTTCCCCGCTATGTaGTTCGTCTCCTGCGTCGGGCTACTCACCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TALLSRIGFPAM*FVSCVGLLTTR Trigger: CCTGGTGGTGAGTAGCCCGACGCAGGAGACGAAGCACATAGCGGGGAAACCGATCCTGGATAACAACGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS TCA 72 bp | TACCGCCGAGGAGACTGGAGGCAAGTCCCACTGCTGTaGCTCCTCCGTTGGTTCCAACTGGAACTTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: YRRGDWRQVPLL*LLRWFQLELSP Trigger: GGGAGAAAGTTCCAGTTGGAACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CCA 72 bp | GGCCGTTCTCTATCATGTAGAGCAGGGCCAGCTCTGTaGGCACGGCGCCATTACAGAACACCTGGACCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GRSLSCRAGPAL*ARRHYRTPGPN Trigger: ATTGGGTCCAGGTGTTCTGTAATGGCGCCGTGCCCACAGAGCTGGCCCTGCTCTACATGATAGAGAACGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS GCA 72 bp | AAAGGTACCGCCGAGGAGACTGGAGGCAAGTCCCACTaGTGTGACTCCTCCGTTGGTTCCAACTGGAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: KGTAEETGGKSH*CDSSVGSNWNF Trigger: AAAGTTCCAGTTGGAACCAACGGAGGAGTCACAGCAGTGGGACTTGCCTCCAGTCTCCTCGGCGGTACCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CCA 72 bp | GCCAGCTCTGTGGGCACGGCGCCATTACAGAACACCTaGACCCAATTCCTCTGTCCTCCTTCCTTATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSVGTAPLQNT*TQFLCPPSLYS Trigger: AGAGTATAAGGAAGGAGGACAGAGGAATTGGGTCCAGGTGTTCTGTAATGGCGCCGTGCCCACAGAGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CAA 90 bp | CCAACTGGAACTTTCTCCCAGGTTGTTATTAGCCGAGGTGAGCTTTaGCTCAGAACTGGAGCAACTTCAGAAGCCCAGGTGTCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PTGTFSQVVISRGEL*LRTGATSEAQVSPA Trigger: GGCTGGAGACACCTGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTCCAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS GCA 72 bp | AACCCAGCCACACCACCAAATGCAATAATGGGCCACTaGGGAGCAGAGATGTCTAAGTCGTTCACAAACACC | + |
|
Preference number: 6 (lower is better) Translates to: NPATPPNAIMGH*GAEMSKSFTNT Trigger: GGTGTTTGTGAACGACTTAGACATCTCTGCTCCGCAGTGGCCCATTATTGCATTTGGTGGTGTGGCTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000092170.7 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS GCA 72 bp | CTTTCTCCCAGGTTGTTATTAGCCGAGGTGAGCTTTTaGTCAGAACTGGAGCAACTTCAGAAGCCCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSPRLLLAEVSF*SELEQLQKPRC Trigger: ACACCTGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGCTAATAACAACCTGGGAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CAA 72 bp | ACTTTCTCCCAGGTTGTTATTAGCCGAGGTGAGCTTTaGCTCAGAACTGGAGCAACTTCAGAAGCCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TFSQVVISRGEL*LRTGATSEAQV Trigger: CACCTGGGCTTCTGAAGTTGCTCCAGTTCTGAGCAAAAGCTCACCTCGGCTAATAACAACCTGGGAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CAA 72 bp | CTCCTCCGTTGGTTCCAACTGGAACTTTCTCCCAGGTaGTTATTAGCCGAGGTGAGCTTTTGCTCAGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLRWFQLELSPR*LLAEVSFCSEL Trigger: CAGTTCTGAGCAAAAGCTCACCTCGGCTAATAACAACCTGGGAGAAAGTTCCAGTTGGAACCAACGGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000092170.7 ENSMUST00000217848.2 ENSMUST00000217884.2 ENSMUST00000217887.2 ENSMUST00000218731.2 ENSMUST00000219890.2 |
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| CDS CAA 90 bp | CAGAACGCTAGGGAAATGCAAATGATCAGGCTCAGTATTACTATATaGGTAATCATCTTTATATACCTTTTGCACGTAGTGTCGTCACTA | + |
|
Preference number: 6 (lower is better) Translates to: QNAREMQMIRLSITI*VIIFIYLLHVVSSL Trigger: TAGTGACGACACTACGTGCAAAAGGTATATAAAGATGATTACCAATATAGTAATACTGAGCCTGATCATTTGCATTTCCCTAGCGTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092170.7 ENSMUST00000217887.2 ENSMUST00000220336.2 |
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| CDS CAA 90 bp | ATCAGGCTCAGTATTACTATATTGGTAATCATCTTTATATACCTTTaGCACGTAGTGTCGTCACTATCTGTCATGGAAAATAGAGCTACG | + |
|
Preference number: 6 (lower is better) Translates to: IRLSITILVIIFIYL*HVVSSLSVMENRAT Trigger: CGTAGCTCTATTTTCCATGACAGATAGTGACGACACTACGTGCAAAAGGTATATAAAGATGATTACCAATATAGTAATACTGAGCCTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217887.2 |
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