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Pregenerated sensors for TMEM186 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043140

Ensembl transcript IDs: ENSMUST00000052505.10

Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTGTGCTTGCATGTGCCAGTTTTCAGGGTCGCCCACTTCACACTaGGTGTGCCCTCCCCTGAGGAAGACTCCTGCTCTCAGAGTTCCC +
Preference number: 1 (lower is better)
Translates to: LCACMCQFSGSPTSH*VCPPLRKTPALRVP
Trigger: GGGAACTCTGAGAGCAGGAGTCTTCCTCAGGGGAGGGCACACCCAGTGTGAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 90 bp GCTCCTCTGCCAACCCTCCTGCCTCCCAGCTTTACAGCAGCGGTCTaGCTTAGTGACCTTGGCATAGCACTCCTCCAACAACTGCCTCTT +
Preference number: 1 (lower is better)
Translates to: APLPTLLPPSFTAAV*LSDLGIALLQQLPL
Trigger: AAGAGGCAGTTGTTGGAGGAGTGCTATGCCAAGGTCACTAAGGCAGACCGCTGCTGTAAAGCTGGGAGGCAGGAGGGTTGGCAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 90 bp GTGCATATGCTTCTAAACACGGCCGGCTCACTCTGTGCTTGCATGTaGCAGTTTTCAGGGTCGCCCACTTCACACTGGGTGTGCCCTCCC +
Preference number: 1 (lower is better)
Translates to: VHMLLNTAGSLCACM*QFSGSPTSHWVCPP
Trigger: GGGAGGGCACACCCAGTGTGAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAGTGAGCCGGCCGTGTTTAGAAGCATATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 90 bp GGACACAGTCCCTCTGCTGCGATGACACTACAAAGCTCTCAAGTGTaGGCACCCCCGGACCTCCTAGGGATCAATGTAGTCTCAGGGGTG +
Preference number: 1 (lower is better)
Translates to: GHSPSAAMTLQSSQV*APPDLLGINVVSGV
Trigger: CACCCCTGAGACTACATTGATCCCTAGGAGGTCCGGGGGTGCTCACACTTGAGAGCTTTGTAGTGTCATCGCAGCAGAGGGACTGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 90 bp CTCAGAGTTCCCATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTaGGACCCCTCCACACACACACACTTTGGCACGTCTAGTCTACTG +
Preference number: 1 (lower is better)
Translates to: LRVPMLPVALCVGLW*DPSTHTHFGTSSLL
Trigger: CAGTAGACTAGACGTGCCAAAGTGTGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACATGGGAACTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 90 bp GTTCATGCTCTGCTTACTTTAGAGAGGACCAGCAGGATGGCTCAGTaGGTGCAGGGGCTTGCTGTCAAGCCTGACAACCTGAATTTAACC +
Preference number: 1 (lower is better)
Translates to: VHALLTLERTSRMAQ*VQGLAVKPDNLNLT
Trigger: GGTTAAATTCAGGTTGTCAGGCTTGACAGCAAGCCCCTGCACGCACTGAGCCATCCTGCTGGTCCTCTCTAAAGTAAGCAGAGCATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 90 bp ATATCGAGGAGTGGAGGAGATAGCCCATCATGTCCACTGACCTGCTaGGTTGGTAAGCATACATATACATTCACATTCAAGTGCACCCCA +
Preference number: 1 (lower is better)
Translates to: ISRSGGDSPSCPLTC*VGKHTYTFTFKCTP
Trigger: TGGGGTGCACTTGAATGTGAATGTATATGTATGCTTACCAACTCAGCAGGTCAGTGGACATGATGGGCTATCTCCTCCACTCCTCGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 90 bp ACTCCTCCAACAACTGCCTCTTCACAGAAACTTCTCGCCACTATATaGTGGGATGTCCTATGTTCCACTAAGGGCTTTTTCCTAAAGCTT +
Preference number: 1 (lower is better)
Translates to: TPPTTASSQKLLATI*WDVLCSTKGFFLKL
Trigger: AAGCTTTAGGAAAAAGCCCTTAGTGGAACATAGGACATCCCATCATATAGTGGCGAGAAGTTTCTGTGAAGAGGCAGTTGTTGGAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 90 bp TTATTCACATATCGAGGAGTGGAGGAGATAGCCCATCATGTCCACTaGCCTGCTGAGTTGGTAAGCATACATATACATTCACATTCAAGT +
Preference number: 1 (lower is better)
Translates to: LFTYRGVEEIAHHVH*PAELVSIHIHSHSS
Trigger: ACTTGAATGTGAATGTATATGTATGCTTACCAACTCAGCAGGTCAGTGGACATGATGGGCTATCTCCTCCACTCCTCGATATGTGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 90 bp CTTTATTTAATCCCAACACTCAGGAGGCAAAGGCTAGAGGATTTCTaGGTTAAGAGCCAGTCTGATCTACATATAGCAAGCTCCAGGATA +
Preference number: 1 (lower is better)
Translates to: LYLIPTLRRQRLEDF*VKSQSDLHIASSRI
Trigger: TATCCTGGAGCTTGCTATATGTAGATCAGACTGGCTCTTAACTCAGAAATCCTCTAGCCTTTGCCTCCTGAGTGTTGGGATTAAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp ATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTGGGACCCCTCCACACACACAGTGAGCATGAGTAAGTaGTGGGCCCCATTGGCACCC +
Preference number: 2 (lower is better)
Translates to: MLPVALCVGLWWDPSTHTVSMSK*WAPLAP
Trigger: GGGTGCCAATGGGGCCCAGCACTTACTCATGCTCAC...TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 90 bp CTGCCTGTGTCACCAGTTCTGAGTACAGGCAGGCATAGCCATGCCTaGTTCTATGCAGTGCTAGGGTCTGAACCCAGGGCTTCACATCCT +
Preference number: 2 (lower is better)
Translates to: LPVSPVLSTGRHSHA*FYAVLGSEPRASHP
Trigger: AGGATGTGAAGCCCTGGGTTCAGACCCTAGCACTGCATAGAACAAGGCATGGCTATGCCTGCCTGTACTCAGAACTGGTGACACAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CCA 90 bp ATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTGGGACCCCTCCACACACACACTGTGGTGCTGGGGATaGAACTTAGGACCTTATACA +
Preference number: 2 (lower is better)
Translates to: MLPVALCVGLWWDPSTHTLWCWG*NLGPYT
Trigger: TGTATAAGGTCCTAAGTTCCATCCCCAGCACCACAG...TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp GCTCTATGTTGTAAGCTCTGGGCTGTGTACCTTATACAGCACTCAGTATTCACTAGACCCCACATCCTGTaGTCCTCTGCCAACCCTCCT +
Preference number: 2 (lower is better)
Translates to: ALCCKLWAVYLIQHSVFTRPHIL*SSANPP
Trigger: AGGAGGGTTGGCAGAGGAGCACAGGATGTGGGGTCT...AGTGAATACTGAGTGCTGTATAAGGTACACAGCCCAGAGCTTACAACATAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CCA 90 bp TCGACAGCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTTGTGTAGGCCTGTGGTaGGACCCCTCCACACACACA +
Preference number: 2 (lower is better)
Translates to: STATKRKDMLHVQDIENGCVGLW*DPSTHT
Trigger: TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACA...ACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGCTGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp ATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTGGGACCCCTCCACACACACATGTTACCTGTGTTCATaGTCTGCTTACTTTAGAGAG +
Preference number: 2 (lower is better)
Translates to: MLPVALCVGLWWDPSTHTCYLCS*SAYFRE
Trigger: CTCTCTAAAGTAAGCAGAGCATGAACACAGGTAACA...TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CCA 90 bp AGGAAGACTCCTGCTCTCAGAGTTCCCATGTTGCCTGTAGCTCTTTGTGTAGGCAAAATAAGTTCACTCTaGGCTTTAGCCATGGCCGTC +
Preference number: 2 (lower is better)
Translates to: RKTPALRVPMLPVALCVGKISSL*ALAMAV
Trigger: GACGGCCATGGCTAAAGCCCAGAGTGAACTTATTTT...GCCTACACAAAGAGCTACAGGCAACATGGGAACTCTGAGAGCAGGAGTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CCA 90 bp ATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTGGGACCCCTCCACACACACAAAAAGGAACGCAACTTaGAAAAGTTGTCCTCCAATC +
Preference number: 2 (lower is better)
Translates to: MLPVALCVGLWWDPSTHTKRNAT*KSCPPI
Trigger: GATTGGAGGACAACTTTTCCAAGTTGCGTTCCTTTT...TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 90 bp AGCTCTGGGCTGTGTACCTTATACAGCACTCAGTATTCACTGGTTTaGCCTGTTCTGTGGTGCTGGGGATGGAACTTAGGACCTTATACA +
Preference number: 2 (lower is better)
Translates to: SSGLCTLYSTQYSLV*PVLWCWGWNLGPYT
Trigger: TGTATAAGGTCCTAAGTTCCATCCCCAGCACCACAGAACAGGCAAAACCAGTGAATACTGAGTGCTGTATAAGGTACACAGCCCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp GGCTCACTCTGTGCTTGCATGTGCCAGTTTTCAGGGTCGCCCACTTCACACTGGTCCAATCTCCTTATATaGACAGTGATAAACACACAA +
Preference number: 2 (lower is better)
Translates to: GSLCACMCQFSGSPTSHWSNLLI*TVINTQ
Trigger: TTGTGTGTTTATCACTGTGCATATAAGGAGATTGGA...CCAGTGTGAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAGTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CCA 90 bp TCGACAGCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTCCTGTTCTGTGGTGCTaGGGATGGAACTTAGGACCT +
Preference number: 2 (lower is better)
Translates to: STATKRKDMLHVQDIENGPVLWC*GWNLGP
Trigger: AGGTCCTAAGTTCCATCCCCAGCACCACAGAACAGG...ACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGCTGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp ATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTGGGACCCCTCCACACACACATTTTCCATCTCACAATaGAATTCAAGGTTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: MLPVALCVGLWWDPSTHTFSISQ*NSRFRN
Trigger: GTTTCTGAACCTTGAATTGCATTGTGAGATGGAAAA...TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp TCGACAGCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTTTGCCTGTTCTGTGGTaGTGGGGATGGAACTTAGGA +
Preference number: 2 (lower is better)
Translates to: STATKRKDMLHVQDIENGLPVLW*WGWNLG
Trigger: TCCTAAGTTCCATCCCCAGCACCACAGAACAGGCAA...ACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGCTGTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp TCGACAGCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTCACTCCTCCAACAACTaGCTCTTCACAGAAACTTCT +
Preference number: 2 (lower is better)
Translates to: STATKRKDMLHVQDIENGHSSNN*LFTETS
Trigger: AGAAGTTTCTGTGAAGAGGCAGTTGTTGGAGGAGTG...ACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGCTGTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CCA 90 bp GCTCTATGTTGTAAGCTCTGGGCTGTGTACCTTATACAGCACTCAGTATTCACTCTAAAGCTTCCTTTTTaGGCCAAAACAACCTTGAAC +
Preference number: 2 (lower is better)
Translates to: ALCCKLWAVYLIQHSVFTLKLPF*AKTTLN
Trigger: GTTCAAGGTTGTTTTGGCCCAAAAAGGAAGCTTTAG...AGTGAATACTGAGTGCTGTATAAGGTACACAGCCCAGAGCTTACAACATAGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CCA 90 bp GCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTTATAATGTTTTGCCTGTTCTGTaGTGCTGGGGATGGAACTTA +
Preference number: 2 (lower is better)
Translates to: ATKRKDMLHVQDIENGYNVLPVL*CWGWNL
Trigger: TAAGTTCCATCCCCAGCACCACAGAACAGGCAAAAC...ATTATAACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR GCA 90 bp TCGACAGCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTTACAAAAATCACGACTaGTTTCCTTTTAATGCAGGT +
Preference number: 2 (lower is better)
Translates to: STATKRKDMLHVQDIENGYKNHD*FPFNAG
Trigger: ACCTGCATTAAAAGGAAAGCAGTCGTGATTTTTGTA...ACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGCTGTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 90 bp TTCTTTATGTCCTTCTCTATCCTCAGCAGGGACAAAAACAAGCACTaGTTTACTGTTTACTTCAGTGTTATTCACATATCGAGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: FFMSFSILSRDKNKH*FTVYFSVIHISRSG
Trigger: TCCACTCCTCGATATGTGAATAACACTGAAGTAAACAGTAAACAAGTGCTTGTTTTTGTCCCTGCTGAGGATAGAGAAGGACATAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 72 bp CAGACCCCACATCCTGTGCTCCTCTGCCAACCCTCCTaGCTCCCAGCTTTACAGCAGCGGTCTGCCTTAGTG +
Preference number: 3 (lower is better)
Translates to: QTPHPVLLCQPS*LPALQQRSALV
Trigger: CACTAAGGCAGACCGCTGCTGTAAAGCTGGGAGGCAGGAGGGTTGGCAGAGGAGCACAGGATGTGGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 72 bp TGCATGTGCCAGTTTTCAGGGTCGCCCACTTCACACTaGGTGTGCCCTCCCCTGAGGAAGACTCCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: CMCQFSGSPTSH*VCPPLRKTPAL
Trigger: GAGAGCAGGAGTCTTCCTCAGGGGAGGGCACACCCAGTGTGAAGTGGGCGACCCTGAAAACTGGCACATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 72 bp CTGCTTACTTTAGAGAGGACCAGCAGGATGGCTCAGTaGGTGCAGGGGCTTGCTGTCAAGCCTGACAACCTG +
Preference number: 3 (lower is better)
Translates to: LLTLERTSRMAQ*VQGLAVKPDNL
Trigger: CAGGTTGTCAGGCTTGACAGCAAGCCCCTGCACGCACTGAGCCATCCTGCTGGTCCTCTCTAAAGTAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 72 bp CCCATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTaGGACCCCTCCACACACACACACTTTGGCACGTCT +
Preference number: 3 (lower is better)
Translates to: PMLPVALCVGLW*DPSTHTHFGTS
Trigger: AGACGTGCCAAAGTGTGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 72 bp GTTCCCATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTaGTGGGACCCCTCCACACACACACACTTTGGCACG +
Preference number: 3 (lower is better)
Translates to: VPMLPVALCVGL*WDPSTHTHFGT
Trigger: CGTGCCAAAGTGTGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACATGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp CCCTCTGCTGCGATGACACTACAAAGCTCTCAAGTGTaGGCACCCCCGGACCTCCTAGGGATCAATGTAGTC +
Preference number: 3 (lower is better)
Translates to: PSAAMTLQSSQV*APPDLLGINVV
Trigger: GACTACATTGATCCCTAGGAGGTCCGGGGGTGCTCACACTTGAGAGCTTTGTAGTGTCATCGCAGCAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 72 bp TTCACACTGGGTGTGCCCTCCCCTGAGGAAGACTCCTaGTCTCAGAGTTCCCATGTTGCCTGTAGCTCTTTG +
Preference number: 3 (lower is better)
Translates to: FTLGVPSPEEDS*SQSSHVACSSL
Trigger: CAAAGAGCTACAGGCAACATGGGAACTCTGAGAGCAGGAGTCTTCCTCAGGGGAGGGCACACCCAGTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 72 bp CGTGCATATGCTTCTAAACACGGCCGGCTCACTCTGTaGTTGCATGTGCCAGTTTTCAGGGTCGCCCACTTC +
Preference number: 3 (lower is better)
Translates to: RAYASKHGRLTL*LHVPVFRVAHF
Trigger: GAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAGTGAGCCGGCCGTGTTTAGAAGCATATGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 72 bp AGGCAGAGGTGGAGAGGACGAAGGCAGGGACAGCTATaGCCTAAGTGCCTACATCCTATCTGGGAGAGTGAA +
Preference number: 3 (lower is better)
Translates to: RQRWRGRRQGQL*PKCLHPIWESE
Trigger: TTCACTCTCCCAGATAGGATGTAGGCACTTAGGCCATAGCTGTCCCTGCCTTCGTCCTCTCCACCTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 72 bp TGGAGAGGACGAAGGCAGGGACAGCTATGGCCTAAGTaGCTACATCCTATCTGGGAGAGTGAAGTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: WRGRRQGQLWPK*LHPIWESEVLE
Trigger: TTCCAGCACTTCACTCTCCCAGATAGGATGTAGGCACTTAGGCCATAGCTGTCCCTGCCTTCGTCCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp GATGGCTCAGTGCGTGCAGGGGCTTGCTGTCAAGCCTaGCAACCTGAATTTAACCCACAAGACCCAAATGCT +
Preference number: 3 (lower is better)
Translates to: DGSVRAGACCQA*QPEFNPQDPNA
Trigger: AGCATTTGGGTCTTGTGGGTTAAATTCAGGTTGTCAGGCTTGACAGCAAGCCCCTGCACGCACTGAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp ATGAATTTTTGCTTGGACACAGTCCCTCTGCTGCGATaGCACTACAAAGCTCTCAAGTGTGAGCACCCCCGG +
Preference number: 3 (lower is better)
Translates to: MNFCLDTVPLLR*HYKALKCEHPR
Trigger: CCGGGGGTGCTCACACTTGAGAGCTTTGTAGTGTCATCGCAGCAGAGGGACTGTGTCCAAGCAAAAATTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 72 bp CTGGGCTGTGTACCTTATACAGCACTCAGTATTCACTaGTTTTGCCTGTTCTGTGGTGCTGGGGATGGAACT +
Preference number: 3 (lower is better)
Translates to: LGCVPYTALSIH*FCLFCGAGDGT
Trigger: AGTTCCATCCCCAGCACCACAGAACAGGCAAAACCAGTGAATACTGAGTGCTGTATAAGGTACACAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp TTGAACTTTTTCTCCACCTGCCTGTGTCACCAGTTCTaGGTACAGGCAGGCATAGCCATGCCTTGTTCTATG +
Preference number: 3 (lower is better)
Translates to: LNFFSTCLCHQF*VQAGIAMPCSM
Trigger: CATAGAACAAGGCATGGCTATGCCTGCCTGTACTCAGAACTGGTGACACAGGCAGGTGGAGAAAAAGTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 72 bp ACTTTGGCACGTCTAGTCTACTGTTACCTGTGTTCATaGTCTGCTTACTTTAGAGAGGACCAGCAGGATGGC +
Preference number: 3 (lower is better)
Translates to: TLARLVYCYLCS*SAYFREDQQDG
Trigger: GCCATCCTGCTGGTCCTCTCTAAAGTAAGCAGAGCATGAACACAGGTAACAGTAGACTAGACGTGCCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR GCA 72 bp GCCAGCGGCGATCGACAGCTACGAAACGCAAGGATATaGTACATGTCCAGGACATTGAAAATGGTTATAATC +
Preference number: 3 (lower is better)
Translates to: ASGDRQLRNARI*YMSRTLKMVII
Trigger: GATTATAACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGCTGTCGATCGCCGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 72 bp TACAGCACTCAGTATTCACTGGTTTTGCCTGTTCTGTaGTGCTGGGGATGGAACTTAGGACCTTATACATGC +
Preference number: 3 (lower is better)
Translates to: YSTQYSLVLPVL*CWGWNLGPYTC
Trigger: GCATGTATAAGGTCCTAAGTTCCATCCCCAGCACCACAGAACAGGCAAAACCAGTGAATACTGAGTGCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CCA 72 bp TGGCACCCTAGAAGCCTTGCTCTATGTTGTAAGCTCTaGGCTGTGTACCTTATACAGCACTCAGTATTCACT +
Preference number: 3 (lower is better)
Translates to: WHPRSLALCCKL*AVYLIQHSVFT
Trigger: AGTGAATACTGAGTGCTGTATAAGGTACACAGCCCAGAGCTTACAACATAGAGCAAGGCTTCTAGGGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp TTCACATCCTGCACACTAAACAAGCATTCTACAAAGTaGGCACCAGCCCAGTCCCTGGTATTAGCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: FTSCTLNKHSTK*APAQSLVLALS
Trigger: AGACAAAGCTAATACCAGGGACTGGGCTGGTGCTCACTTTGTAGAATGCTTGTTTAGTGTGCAGGATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp ACAACTGCCTCTTCACAGAAACTTCTCGCCACTATATaGTGGGATGTCCTATGTTCCACTAAGGGCTTTTTC +
Preference number: 3 (lower is better)
Translates to: TTASSQKLLATI*WDVLCSTKGFF
Trigger: GAAAAAGCCCTTAGTGGAACATAGGACATCCCATCATATAGTGGCGAGAAGTTTCTGTGAAGAGGCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp AGTGGAGGAGATAGCCCATCATGTCCACTGACCTGCTaGGTTGGTAAGCATACATATACATTCACATTCAAG +
Preference number: 3 (lower is better)
Translates to: SGGDSPSCPLTC*VGKHTYTFTFK
Trigger: CTTGAATGTGAATGTATATGTATGCTTACCAACTCAGCAGGTCAGTGGACATGATGGGCTATCTCCTCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CAA 90 bp AAGCATATGCACTGTCCTTTAGATGATGAATTTTTGCTTGGACACAGTCCCTCTTGGGCCAAAACAACCTaGAACTTTTTCTCCACCTGC +
Preference number: 3 (lower is better)
Translates to: KHMHCPLDDEFLLGHSPSWAKTT*NFFSTC
Trigger: GCAGGTGGAGAAAAAGTTCAAGGTTGTTTTGGCCCA...AGAGGGACTGTGTCCAAGCAAAAATTCATCATCTAAAGGACAGTGCATATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR TCA 72 bp CATGGATGTCAGAATAACAAATTCAGACAGATTAACTaGTGCCTACAAACAGGCAGAGGTGGAGAGGACGAA +
Preference number: 3 (lower is better)
Translates to: HGCQNNKFRQIN*CLQTGRGGEDE
Trigger: TTCGTCCTCTCCACCTCTGCCTGTTTGTAGGCATCAGTTAATCTGTCTGAATTTGTTATTCTGACATCCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CAA 90 bp TCGACAGCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTTTAGATGATGAATTTTaGCTTGGACACAGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: STATKRKDMLHVQDIENGLDDEF*LGHSPS
Trigger: AGAGGGACTGTGTCCAAGCAAAAATTCATCATCTAA...ACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGCTGTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR-3UTR CAA 90 bp GCTACGAAACGCAAGGATATGCTACATGTCCAGGACATTGAAAATGGTTATAATCGCAACTTGGAAAAGTaGTCCTCCAATCTCCTTATA +
Preference number: 3 (lower is better)
Translates to: ATKRKDMLHVQDIENGYNRNLEK*SSNLLI
Trigger: TATAAGGAGATTGGAGGACAACTTTTCCAAGTTGCG...ATTATAACCATTTTCAATGTCCTGGACATGTAGCATATCCTTGCGTTTCGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR CCA 90 bp GGCTCACTCTGTGCTTGCATGTGCCAGTTTTCAGGGTCGCCCACTTCACACTGGACAGTCACAGCTGTCTaGGCCAACTTCAGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: GSLCACMCQFSGSPTSHWTVTAV*ANFSRE
Trigger: CTCGCGGCTGAAGTTGGCCCAGACAGCTGTGACTGT...CCAGTGTGAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR GCA 90 bp ATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTGGGACCCCTCCACACACACACGTTCACATACAGGATaGCCACCAGTCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: MLPVALCVGLWWDPSTHTRSHTG*PPVSGR
Trigger: TCTTCCGGAGACTGGTGGGCATCCTGTATGTGAACG...TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 72 bp TCACCAGTTCTGAGTACAGGCAGGCATAGCCATGCCTaGTTCTATGCAGTGCTAGGGTCTGAACCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPVLSTGRHSHA*FYAVLGSEPRA
Trigger: AGCCCTGGGTTCAGACCCTAGCACTGCATAGAACAAGGCATGGCTATGCCTGCCTGTACTCAGAACTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 72 bp GCATATGCTTCTAAACACGGCCGGCTCACTCTGTGCTaGCATGTGCCAGTTTTCAGGGTCGCCCACTTCACA +
Preference number: 4 (lower is better)
Translates to: AYASKHGRLTLC*HVPVFRVAHFT
Trigger: TGTGAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAGTGAGCCGGCCGTGTTTAGAAGCATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR CCA 90 bp ATGTTGCCTGTAGCTCTTTGTGTAGGCCTGTGGTGGGACCCCTCCACACACACAAGTCTCCGGAAGAAGTaGCTCATCCAACAGAGCATG +
Preference number: 4 (lower is better)
Translates to: MLPVALCVGLWWDPSTHTSLRKK*LIQQSM
Trigger: CATGCTCTGTTGGATGAGCCACTTCTTCCGGAGACT...TGTGTGTGTGGAGGGGTCCCACCACAGGCCTACACAAAGAGCTACAGGCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR CCA 90 bp GGCTCACTCTGTGCTTGCATGTGCCAGTTTTCAGGGTCGCCCACTTCACACTGGTGCTGTTCTTCAGTGTaGCCAGAGTTCCGAACACTT +
Preference number: 4 (lower is better)
Translates to: GSLCACMCQFSGSPTSHWCCSSV*PEFRTL
Trigger: AAGTGTTCGGAACTCTGGCCACACTGAAGAACAGCA...CCAGTGTGAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAGTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR CCA 90 bp GCTCTATGTTGTAAGCTCTGGGCTGTGTACCTTATACAGCACTCAGTATTCACTGACTTCTCCCGTGAGTaGGGAGACCTGCTCCCCACC +
Preference number: 4 (lower is better)
Translates to: ALCCKLWAVYLIQHSVFTDFSRE*GDLLPT
Trigger: GGTGGGGAGCAGGTCTCCCCACTCACGGGAGAAGTC...AGTGAATACTGAGTGCTGTATAAGGTACACAGCCCAGAGCTTACAACATAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR GCA 90 bp AAGCATTCTGGTAGACAAATTACAAAAATCACGACTGCTTTCCTTTTAATGCAGGCACAGTACGTGTCCTaGCGCCAGCCCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KHSGRQITKITTAFLLMQAQYVS*RQPQKV
Trigger: GACCTTCTGGGGCTGGCGGCAGGACACGTACTGTGC...CTGCATTAAAAGGAAAGCAGTCGTGATTTTTGTAATTTGTCTACCAGAATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 72 bp CTGTGTACCTTATACAGCACTCAGTATTCACTGGTTTaGCCTGTTCTGTGGTGCTGGGGATGGAACTTAGGA +
Preference number: 4 (lower is better)
Translates to: LCTLYSTQYSLV*PVLWCWGWNLG
Trigger: TCCTAAGTTCCATCCCCAGCACCACAGAACAGGCAAAACCAGTGAATACTGAGTGCTGTATAAGGTACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR GCA 90 bp AAGCATATGCACTGTCCTTTAGATGATGAATTTTTGCTTGGACACAGTCCCTCTGGTAGAAGGTCTGCTTaGCACTGTACTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: KHMHCPLDDEFLLGHSPSGRRSA*HCTAGC
Trigger: GCATCCAGCAGTACAGTGGCAAGCAGACCTTCTACC...AGAGGGACTGTGTCCAAGCAAAAATTCATCATCTAAAGGACAGTGCATATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 72 bp GAAAAGCATATGCACTGTCCTTTAGATGATGAATTTTaGCTTGGACACAGTCCCTCTGCTGCGATGACACTA +
Preference number: 4 (lower is better)
Translates to: EKHMHCPLDDEF*LGHSPSAAMTL
Trigger: TAGTGTCATCGCAGCAGAGGGACTGTGTCCAAGCAAAAATTCATCATCTAAAGGACAGTGCATATGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
3UTR CAA 72 bp TCCTTCTCTATCCTCAGCAGGGACAAAAACAAGCACTaGTTTACTGTTTACTTCAGTGTTATTCACATATCG +
Preference number: 4 (lower is better)
Translates to: SFSILSRDKNKH*FTVYFSVIHIS
Trigger: CGATATGTGAATAACACTGAAGTAAACAGTAAACAAGTGCTTGTTTTTGTCCCTGCTGAGGATAGAGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 90 bp CCTGCCGCCAGCCCCAGAAGGTCAGGTGGGCCACTCGGAGCAGGGTaGCCGACTCGTTCACATACAGGATGCCCACCAGTCTCCGGAAGA +
Preference number: 5 (lower is better)
Translates to: PAASPRRSGGPLGAG*PTRSHTGCPPVSGR
Trigger: TCTTCCGGAGACTGGTGGGCATCCTGTATGTGAACGAGTCGGGCACCCTGCTCCGAGTGGCCCACCTGACCTTCTGGGGCTGGCGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 90 bp GACACGGCACAGTACGTGTCCTGCCGCCAGCCCCAGAAGGTCAGGTaGGCCACTCGGAGCAGGGTGCCCGACTCGTTCACATACAGGATG +
Preference number: 5 (lower is better)
Translates to: DTAQYVSCRQPQKVR*ATRSRVPDSFTYRM
Trigger: CATCCTGTATGTGAACGAGTCGGGCACCCTGCTCCGAGTGGCCCACCTGACCTTCTGGGGCTGGCGGCAGGACACGTACTGTGCCGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 90 bp GATTCTGACAGGGGTATCATGTCTGACACGGCACAGTACGTGTCCTaGCGCCAGCCCCAGAAGGTCAGGTGGGCCACTCGGAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: DSDRGIMSDTAQYVS*RQPQKVRWATRSRV
Trigger: CACCCTGCTCCGAGTGGCCCACCTGACCTTCTGGGGCTGGCGGCAGGACACGTACTGTGCCGTGTCAGACATGATACCCCTGTCAGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 90 bp GGTGGGCCACTCGGAGCAGGGTGCCCGACTCGTTCACATACAGGATaGCCACCAGTCTCCGGAAGAAGTGGCTCATCCAACAGAGCATGG +
Preference number: 5 (lower is better)
Translates to: GGPLGAGCPTRSHTG*PPVSGRSGSSNRAW
Trigger: CCATGCTCTGTTGGATGAGCCACTTCTTCCGGAGACTGGTGGGCATCCTGTATGTGAACGAGTCGGGCACCCTGCTCCGAGTGGCCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 90 bp GGATGCCCACCAGTCTCCGGAAGAAGTGGCTCATCCAACAGAGCATaGCCAGGGCAAAGCTGGCGACCCCACCCAGAAGGCACAGTGAAC +
Preference number: 5 (lower is better)
Translates to: GCPPVSGRSGSSNRA*PGQSWRPHPEGTVN
Trigger: GTTCACTGTGCCTTCTGGGTGGGGTCGCCAGCTTTGCCCTGGCCATGCTCTGTTGGATGAGCCACTTCTTCCGGAGACTGGTGGGCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS-3UTR CAA 90 bp GGCCGGCTCACTCTGTGCTTGCATGTGCCAGTTTTCAGGGTCGCCCACTTCACACTCCCCACCCACCTTTaGGAATCCCCCTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GRLTLCLHVPVFRVAHFTLPTHL*ESPCPE
Trigger: CTCTGGGCAGGGGGATTCCAAAAGGTGGGTGGGGAG...TGTGAAGTGGGCGACCCTGAAAACTGGCACATGCAAGCACAGAGTGAGCCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 90 bp CCCGACTCGTTCACATACAGGATGCCCACCAGTCTCCGGAAGAAGTaGCTCATCCAACAGAGCATGGCCAGGGCAAAGCTGGCGACCCCA +
Preference number: 5 (lower is better)
Translates to: PDSFTYRMPTSLRKK*LIQQSMARAKLATP
Trigger: TGGGGTCGCCAGCTTTGCCCTGGCCATGCTCTGTTGGATGAGCCACTTCTTCCGGAGACTGGTGGGCATCCTGTATGTGAACGAGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 90 bp CTGTCTGGGCCAACTTCAGCCGCGAGAGGAACCCAATTGCTCGGATaGCTCGGAACCGGTAGATTGTATGGAATGTTTCGGTCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: LSGPTSAARGTQLLG*LGTGRLYGMFRSRC
Trigger: GCACCGAGACCGAAACATTCCATACAATCTACCGGTTCCGAGCCATCCGAGCAATTGGGTTCCTCTCGCGGCTGAAGTTGGCCCAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS TCA 90 bp CTTGTGCGAACCGTTCCCTGTCCAGGATTCGGCCATAGCGTAAGGTaGGGTAGAAGGTCTGCTTGCCACTGTACTGCTGGATGCGTACAA +
Preference number: 5 (lower is better)
Translates to: LVRTVPCPGFGHSVR*GRRSACHCTAGCVQ
Trigger: TTGTACGCATCCAGCAGTACAGTGGCAAGCAGACCTTCTACCTCACCTTACGCTATGGCCGAATCCTGGACAGGGAACGGTTCGCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 72 bp AGCCCCAGAAGGTCAGGTGGGCCACTCGGAGCAGGGTaGCCGACTCGTTCACATACAGGATGCCCACCAGTC +
Preference number: 6 (lower is better)
Translates to: SPRRSGGPLGAG*PTRSHTGCPPV
Trigger: GACTGGTGGGCATCCTGTATGTGAACGAGTCGGGCACCCTGCTCCGAGTGGCCCACCTGACCTTCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 72 bp AGGGGTATCATGTCTGACACGGCACAGTACGTGTCCTaGCGCCAGCCCCAGAAGGTCAGGTGGGCCACTCGG +
Preference number: 6 (lower is better)
Translates to: RGIMSDTAQYVS*RQPQKVRWATR
Trigger: CCGAGTGGCCCACCTGACCTTCTGGGGCTGGCGGCAGGACACGTACTGTGCCGTGTCAGACATGATACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 72 bp AAGCCCGGGGGCAGGGCCACCACAGTCACAGCTGTCTaGGCCAACTTCAGCCGCGAGAGGAACCCAATTGCT +
Preference number: 6 (lower is better)
Translates to: KPGGRATTVTAV*ANFSRERNPIA
Trigger: AGCAATTGGGTTCCTCTCGCGGCTGAAGTTGGCCCAGACAGCTGTGACTGTGGTGGCCCTGCCCCCGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 72 bp CCAGTCTCCGGAAGAAGTGGCTCATCCAACAGAGCATaGCCAGGGCAAAGCTGGCGACCCCACCCAGAAGGC +
Preference number: 6 (lower is better)
Translates to: PVSGRSGSSNRA*PGQSWRPHPEG
Trigger: GCCTTCTGGGTGGGGTCGCCAGCTTTGCCCTGGCCATGCTCTGTTGGATGAGCCACTTCTTCCGGAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 72 bp AGCACCATAGTCCCTGTAGAGGCCTCCTCCATGCAGTaGGCCCCTGCAACCTTGGCACGACTCGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: STIVPVEASSMQ*APATLARLEGG
Trigger: TCCTCCTTCGAGTCGTGCCAAGGTTGCAGGGGCCCACTGCATGGAGGAGGCCTCTACAGGGACTATGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 72 bp CTCGGAGCAGGGTGCCCGACTCGTTCACATACAGGATaGCCACCAGTCTCCGGAAGAAGTGGCTCATCCAAC +
Preference number: 6 (lower is better)
Translates to: LGAGCPTRSHTG*PPVSGRSGSSN
Trigger: GTTGGATGAGCCACTTCTTCCGGAGACTGGTGGGCATCCTGTATGTGAACGAGTCGGGCACCCTGCTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 72 bp GCTGTTCTTCAGTGTGGCCAGAGTTCCGAACACTTGTaGGAACCGTTCCCTGTCCAGGATTCGGCCATAGCG +
Preference number: 6 (lower is better)
Translates to: AVLQCGQSSEHL*EPFPVQDSAIA
Trigger: CGCTATGGCCGAATCCTGGACAGGGAACGGTTCGCACAAGTGTTCGGAACTCTGGCCACACTGAAGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CAA 72 bp CTGTCTGGGCCAACTTCAGCCGCGAGAGGAACCCAATaGCTCGGATGGCTCGGAACCGGTAGATTGTATGGA +
Preference number: 6 (lower is better)
Translates to: LSGPTSAARGTQ*LGWLGTGRLYG
Trigger: TCCATACAATCTACCGGTTCCGAGCCATCCGAGCAATTGGGTTCCTCTCGCGGCTGAAGTTGGCCCAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS TCA 72 bp ACCGTTCCCTGTCCAGGATTCGGCCATAGCGTAAGGTaGGGTAGAAGGTCTGCTTGCCACTGTACTGCTGGA +
Preference number: 6 (lower is better)
Translates to: TVPCPGFGHSVR*GRRSACHCTAG
Trigger: TCCAGCAGTACAGTGGCAAGCAGACCTTCTACCTCACCTTACGCTATGGCCGAATCCTGGACAGGGAACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS GCA 72 bp TGTCTGGGCCAACTTCAGCCGCGAGAGGAACCCAATTaGTCGGATGGCTCGGAACCGGTAGATTGTATGGAA +
Preference number: 6 (lower is better)
Translates to: CLGQLQPREEPN*SDGSEPVDCME
Trigger: TTCCATACAATCTACCGGTTCCGAGCCATCCGAGCAATTGGGTTCCTCTCGCGGCTGAAGTTGGCCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CCA 72 bp TTCACATACAGGATGCCCACCAGTCTCCGGAAGAAGTaGCTCATCCAACAGAGCATGGCCAGGGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: FTYRMPTSLRKK*LIQQSMARAKL
Trigger: CAGCTTTGCCCTGGCCATGCTCTGTTGGATGAGCCACTTCTTCCGGAGACTGGTGGGCATCCTGTATGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CAA 72 bp GGAACCCAATTGCTCGGATGGCTCGGAACCGGTAGATaGTATGGAATGTTTCGGTCTCGGTGCCTGGTGACT +
Preference number: 6 (lower is better)
Translates to: GTQLLGWLGTGR*YGMFRSRCLVT
Trigger: AGTCACCAGGCACCGAGACCGAAACATTCCATACAATCTACCGGTTCCGAGCCATCCGAGCAATTGGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10
CDS CAA 72 bp CTTGCTGTTCTTCAGTGTGGCCAGAGTTCCGAACACTaGTGCGAACCGTTCCCTGTCCAGGATTCGGCCATA +
Preference number: 6 (lower is better)
Translates to: LAVLQCGQSSEH*CEPFPVQDSAI
Trigger: TATGGCCGAATCCTGGACAGGGAACGGTTCGCACAAGTGTTCGGAACTCTGGCCACACTGAAGAACAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000052505.10