Pregenerated sensors for TMEM185A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073139Ensembl transcript IDs: ENSMUST00000101506.10, ENSMUST00000114630.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATGGGTTCTGGGCTGGCTATACCAGCAGAGCCTGGAGAAACTGCTaGCAGGTGGTGGTACCTGCATGCCCAGTATGCAGTGTTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: DGFWAGYTSRAWRNC*QVVVPACPVCSVLL Trigger: AAGAAGAACACTGCATACTGGGCATGCAGGTACCACCACCTGTCAGCAGTTTCTCCAGGCTCTGCTGGTATAGCCAGCCCAGAACCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CCA 90 bp | CAGACCACAGATGTGCTTTCTGTGGGCCTAGGCAGCAGTCATCCCTaGGTGGGTATCACAGGAATGAGAACACATTTCAGGTACCCATAC | + |
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Preference number: 1 (lower is better) Translates to: QTTDVLSVGLGSSHP*VGITGMRTHFRYPY Trigger: GTATGGGTACCTGAAATGTGTTCTCATTCCTGTGATACCCACCCAGGGATGACTGCTGCCTAGGCCCACAGAAAGCACATCTGTGGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CCA 90 bp | AATGCTACACTGCTTCCCCTTTCTTCTGAAACAGAACAGGCTCACTaGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACTTCAATT | + |
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Preference number: 1 (lower is better) Translates to: NATLLPLSSETEQAH*RPVPRVGLGLETSI Trigger: AATTGAAGTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTCTGTTTCAGAAGAAAGGGGAAGCAGTGTAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CCA 90 bp | ATACCAGCAGAGCCTGGAGAAACTGCTGACAGGTGGTGGTACCTGCATGCCCAGGGCAGCAGTCATCCCTaGGTGGGTATCACAGGAATG | + |
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Preference number: 2 (lower is better) Translates to: IPAEPGETADRWWYLHAQGSSHP*VGITGM Trigger: CATTCCTGTGATACCCACCCAGGGATGACTGCTGCC...CTGGGCATGCAGGTACCACCACCTGTCAGCAGTTTCTCCAGGCTCTGCTGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR GCA 90 bp | GAACAGGCTCACTGGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACTTCACCTGCATGCCCAGTATaGAGTGTTCTTCTTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: EQAHWRPVPRVGLGLETSPACPV*SVLLAG Trigger: ACCTGCAAGAAGAACACTGCATACTGGGCATGCAGG...TGAAGTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CCA 90 bp | GAACAGGCTCACTGGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACTTCAATGGAATCATGCCATTaGGAAGGGCTCACTGATGAG | + |
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Preference number: 2 (lower is better) Translates to: EQAHWRPVPRVGLGLETSMESCH*EGLTDE Trigger: CTCATCAGTGAGCCCTTCCCAATGGCATGATTCCAT...TGAAGTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGCTCACTGGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACTTCAATTTCCCACACCCCATGTTaGAAAAGCACAGAGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QAHWRPVPRVGLGLETSISHTPC*KSTELS Trigger: GGAAAGCTCTGTGCTTTTCCAACATGGGGTGTGGGA...AATTGAAGTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CCA 90 bp | GAACAGGCTCACTGGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACTTCACTGAAGGTTATTTTCTaGTATGATGGGTTCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: EQAHWRPVPRVGLGLETSLKVIF*YDGFWA Trigger: AGCCCAGAACCCATCATACCAGAAAATAACCTTCAG...TGAAGTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CAA 90 bp | AGCCATTTCTCCCACACCCCATGTTGGAAAAGCACAGAGCTTTCCTaGATTGTAGTAGCTGTGCTGGCAGAAATTCCAGGGTATCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SHFSHTPCWKSTELS*IVVAVLAEIPGYQW Trigger: CCACTGATACCCTGGAATTTCTGCCAGCACAGCTACTACAATCAAGGAAAGCTCTGTGCTTTTCCAACATGGGGTGTGGGAGAAATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAATGCTACACTGCTTCCCCTTTCTTCTGAAACAGAACAGGCTCACTGGAGGGATTCTGGCCTGCCTTaGCAACCTTCTCTAGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: KNATLLPLSSETEQAHWRDSGLP*QPSLVS Trigger: GGACACTAGAGAAGGTTGCCAAGGCAGGCCAGAATC...CCTCCAGTGAGCCTGTTCTGTTTCAGAAGAAAGGGGAAGCAGTGTAGCATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAATGCTACACTGCTTCCCCTTTCTTCTGAAACAGAACAGGCTCACTGGAGGACTGCTGACAGGTGGTaGTACCTGCATGCCCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: KNATLLPLSSETEQAHWRTADRW*YLHAQY Trigger: ATACTGGGCATGCAGGTACCACCACCTGTCAGCAGT...CCTCCAGTGAGCCTGTTCTGTTTCAGAAGAAAGGGGAAGCAGTGTAGCATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAATGCTACACTGCTTCCCCTTTCTTCTGAAACAGAACAGGCTCACTGGAGGCAAGGGGGCATTTCTTaGGCTTTTAAGCCATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: KNATLLPLSSETEQAHWRQGGIS*AFKPFL Trigger: GAGAAATGGCTTAAAAGCCCAAGAAATGCCCCCTTG...CCTCCAGTGAGCCTGTTCTGTTTCAGAAGAAAGGGGAAGCAGTGTAGCATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR TCA 72 bp | TGGGCTGGCTATACCAGCAGAGCCTGGAGAAACTGCTaGCAGGTGGTGGTACCTGCATGCCCAGTATGCAGT | + |
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Preference number: 3 (lower is better) Translates to: WAGYTSRAWRNC*QVVVPACPVCS Trigger: ACTGCATACTGGGCATGCAGGTACCACCACCTGTCAGCAGTTTCTCCAGGCTCTGCTGGTATAGCCAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CCA 72 bp | GCTATACCAGCAGAGCCTGGAGAAACTGCTGACAGGTaGTGGTACCTGCATGCCCAGTATGCAGTGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: AIPAEPGETADR*WYLHAQYAVFF Trigger: GAAGAACACTGCATACTGGGCATGCAGGTACCACCACCTGTCAGCAGTTTCTCCAGGCTCTGCTGGTATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CCA 72 bp | CTGCTTCCCCTTTCTTCTGAAACAGAACAGGCTCACTaGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: LLPLSSETEQAH*RPVPRVGLGLE Trigger: CTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTCTGTTTCAGAAGAAAGGGGAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR GCA 72 bp | CCTATGTTCTGTTCTGAGTGGCTGGTTGACACTGGATaGAAACGAGGCTTCAGATGGTGGTCCGAGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: PMFCSEWLVDTG*KRGFRWWSEVP Trigger: TGGAACCTCGGACCACCATCTGAAGCCTCGTTTGCATCCAGTGTCAACCAGCCACTCAGAACAGAACATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CCA 72 bp | GATGTGCTTTCTGTGGGCCTAGGCAGCAGTCATCCCTaGGTGGGTATCACAGGAATGAGAACACATTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: DVLSVGLGSSHP*VGITGMRTHFR Trigger: CCTGAAATGTGTTCTCATTCCTGTGATACCCACCCAGGGATGACTGCTGCCTAGGCCCACAGAAAGCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CCA 72 bp | GATTCTGGCCTGCCTTGGCAACCTTCTCTAGTGTCCTaGTCTCAAGGGGGCATTTCTTGGGCTTTTAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: DSGLPWQPSLVS*SQGGISWAFKP Trigger: TGGCTTAAAAGCCCAAGAAATGCCCCCTTGAGACCAGGACACTAGAGAAGGTTGCCAAGGCAGGCCAGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR TCA 72 bp | ACAGCAGAGACAAGGAAAGCAGGGCCGGGCTGTATCTaGACACAGCAGGTGTGTACAGACCTACTTATAGTC | + |
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Preference number: 3 (lower is better) Translates to: TAETRKAGPGCI*TQQVCTDLLIV Trigger: GACTATAAGTAGGTCTGTACACACCTGCTGTGTTCAGATACAGCCCGGCCCTGCTTTCCTTGTCTCTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR GCA 72 bp | AATCATGCCATTGGGAAGGGCTCACTGATGAGGCCCTaGAAACCTGCTGTCATCCTGGCTAAAGCTAAATTT | + |
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Preference number: 3 (lower is better) Translates to: NHAIGKGSLMRP*KPAVILAKAKF Trigger: AAATTTAGCTTTAGCCAGGATGACAGCAGGTTTGCAGGGCCTCATCAGTGAGCCCTTCCCAATGGCATGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR CCA 72 bp | CTGTATAAATACTATATAGGCATGGAATCATGCCATTaGGAAGGGCTCACTGATGAGGCCCTGCAAACCTGC | + |
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Preference number: 3 (lower is better) Translates to: LYKYYIGMESCH*EGLTDEALQTC Trigger: GCAGGTTTGCAGGGCCTCATCAGTGAGCCCTTCCCAATGGCATGATTCCATGCCTATATAGTATTTATACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR-3UTR CAA 90 bp | GTAAGTGAGGTGGGGCATCTGACTGAGATACAGCAGTCTGAGCTATCTGCTTCTAAAGAAATAGGTTCTTaGCTCATGTGTCACTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VSEVGHLTEIQQSELSASKEIGS*LMCHWH Trigger: ATGCCAGTGACACATGAGCAAAGAACCTATTTCTTT...AGAAGCAGATAGCTCAGACTGCTGTATCTCAGTCAGATGCCCCACCTCACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| 3UTR TCA 72 bp | GATCAGGTGACCATGAATGAATCATTTGATTTAGACTaGAGGTTATTTTCTGGTATGATGGGTTCTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: DQVTMNESFDLD*RLFSGMMGSGL Trigger: CAGCCCAGAACCCATCATACCAGAAAATAACCTTCAGTCTAAATCAAATGATTCATTCATGGTCACCTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR CCA 90 bp | GGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTACTTGCCAGGGCTCTaGGTGATGACTACCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGKGSRSVCLSAHTLRRPYLPGL*VMTTLA Trigger: GGCCAGGGTAGTCATCACCCAGAGCCCTGGCAAGTA...GGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | AGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGCGTCCTTACTTGCCAGGGCTCTaGGTGATGACTACCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SRSVCLSAHTLRRPWWRPYLPGL*VMTTLA Trigger: GGCCAGGGTAGTCATCACCCAGAGCCCTGGCAAGTA...AGGACGCCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | GGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCAAAGCCCCAGACACATaGTGCAACAGACACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: GGKGSRSVCLSAHTLRRPKAPDT*CNRHWG Trigger: TCCCCAGTGTCTGTTGCAGCATGTGTCTGGGGCTTT...GGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | AGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGCGGCACAAGAAGGACATaGGAATCCACAGAGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: REVGVCVSVHTHSGGPGGGTRRT*ESTEGH Trigger: GTGTCCCTCTGTGGATTCTCATGTCCTTCTTGTGCC...GCCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | TTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCGGCACAAGAAGGACATaGGAATCCACAGAGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: LGAREVGVCVSVHTHSGGGTRRT*ESTEGH Trigger: GTGTCCCTCTGTGGATTCTCATGTCCTTCTTGTGCC...GCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | AGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGCCCCAGACACATGCTaGAACAGACACTGGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: RLGAREVGVCVSVHTHSGAPDTC*NRHWGN Trigger: GTTTCCCCAGTGTCTGTTGCAGCATGTGTCTGGGGC...GCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | GGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGAGTAGCTCCATTGAATaGTGCCATCCAAACGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GKGSRSVCLSAHTLRRPWSSSIE*CHPNEG Trigger: CCCTTCGTTTGGATGGCATCATTCAATGGAGCTACT...CCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | GGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGGCAGGAGCAAATGGATaGCCACAGCAATTAACATGG | + |
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Preference number: 4 (lower is better) Translates to: GKGSRSVCLSAHTLRRPWAGANG*PQQLTW Trigger: CCATGTTAATTGCTGTGGGCATCCATTTGCTCCTGC...CCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | AGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGCACCAGAAGCCAGAAATaGCTTCCTCTCTCAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: REVGVCVSVHTHSGGPGGTRSQK*LPLSIL Trigger: CAGGATTGAGAGAGGAAGCCATTTCTGGCTTCTGGT...GCCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | GGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGACAAGCCAGGGCCAGTaGATAATCTTGTCCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GKGSRSVCLSAHTLRRPWTSQGQ*IILSSL Trigger: AAGACTGGACAAGATTATCCACTGGCCCTGGCTTGT...CCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114630.3 |
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| 3UTR CAA 72 bp | AGGCTTCAGATGGTGGTCCGAGGTTCCAGGTCTAGGTaGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RLQMVVRGSRSR*GAREVGVCVSV Trigger: CACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGAACCTCGGACCACCATCTGAAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR TCA 90 bp | GCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTAGTAGCTCCATTGAATaGTGCCATCCAAACGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: AREVGVCVSVHTHSGGPGSSSIE*CHPNEG Trigger: CCCTTCGTTTGGATGGCATCATTCAATGGAGCTACT...ACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | AAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGAACTCCAGTTCCAACTaGTGCGCCAACAATGACCAT | + |
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Preference number: 4 (lower is better) Translates to: KGSRSVCLSAHTLRRPWWNSSSN*CANNDH Trigger: ATGGTCATTGTTGGCGCATCAGTTGGAACTGGAGTT...CCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | AAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGGCAGGAGCAAATGGATaGCCACAGCAATTAACATGG | + |
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Preference number: 4 (lower is better) Translates to: KGSRSVCLSAHTLRRPWWAGANG*PQQLTW Trigger: CCATGTTAATTGCTGTGGGCATCCATTTGCTCCTGC...CCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | GGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTCTTCCACAACCATATTaGAGCAAAGACAGCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GAREVGVCVSVHTHSGGPLPQPY*SKDSPV Trigger: TACTGGGCTGTCTTTGCTCCAATATGGTTGTGGAAG...AGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | TCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGAATTTACTCGGGTTaGAGTCCTGAAAGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SRLGAREVGVCVSVHTHSGIYSG*SPERGP Trigger: GGGGCCTCTTTCAGGACTTCAACCCGAGTAAATTCC...GGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | GGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTCAAAGAACAATGGCATaGAGACCAGAAGCCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GAREVGVCVSVHTHSGGPQRTMA*RPEARN Trigger: ATTTCTGGCTTCTGGTCTTCATGCCATTGTTCTTTG...AGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | TTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCATACTGAGGATTTCGTaGCCAAACTCCAGTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LGAREVGVCVSVHTHSGGILRIS*PNSSSN Trigger: GTTGGAACTGGAGTTTGGGCACGAAATCCTCAGTAT...GCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | ACAGAACAGGCTCACTGGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACTAAAGCCCCAGACACATaGTGCAACAGACACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: TEQAHWRPVPRVGLGLETKAPDT*CNRHWG Trigger: TCCCCAGTGTCTGTTGCAGCATGTGTCTGGGGCTTT...AGTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR GCA 90 bp | GTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCTTGCGGAACATAGGTaGAATTTTAGGAGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VGGKGSRSVCLSAHTLRRLAEHR*NFRRFW Trigger: CCAGAACCTCCTAAAATTGCACCTATGTTCCGCAAG...CCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | GCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTCTTGCGGAACATAGGTaGAATTTTAGGAGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AREVGVCVSVHTHSGGPGLAEHR*NFRRFW Trigger: CCAGAACCTCCTAAAATTGCACCTATGTTCCGCAAG...ACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | AGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCATACTGAGGATTTCGTaGCCAAACTCCAGTTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: RLGAREVGVCVSVHTHSGILRIS*PNSSSN Trigger: GTTGGAACTGGAGTTTGGGCACGAAATCCTCAGTAT...GCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | AAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGGGAAACAAAGAACAATaGCATGAAGACCAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KGSRSVCLSAHTLRRPWWGNKEQ*HEDQKP Trigger: TGGCTTCTGGTCTTCATGCCATTGTTCTTTGTTTCC...CCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | CGAGGTTCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGAGGAGGTTCTGGAACTaGGGTTTCTTCTGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RGSRSRLGAREVGVCVSVRRFWN*GFFCFL Trigger: GAGGAAACAGAAGAAACCCCAGTTCCAGAACCTCCT...CACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGAACCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | AACAGAACAGGCTCACTGGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACCTGATGCGCCAACAATaGCCATTAACTTCCACAACC | + |
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Preference number: 4 (lower is better) Translates to: NRTGSLEACAKGRTRVRDLMRQQ*PLTSTT Trigger: GGTTGTGGAAGTTAATGGTCATTGTTGGCGCATCAG...GTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR TCA 90 bp | GAACAGGCTCACTGGAGGCCTGTGCCAAGGGTAGGACTAGGGTTAGAGACTTCAAACTCCAGTTCCAACTaGTGCGCCAACAATGACCAT | + |
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Preference number: 4 (lower is better) Translates to: EQAHWRPVPRVGLGLETSNSSSN*CANNDH Trigger: ATGGTCATTGTTGGCGCATCAGTTGGAACTGGAGTT...TGAAGTCTCTAACCCTAGTCCTACCCTTGGCACAGGCCTCCAGTGAGCCTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR CCA 90 bp | CGAGGTTCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCTTCCACAACCATATTaGAGCAAAGACAGCCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: RGSRSRLGAREVGVCVSVLPQPY*SKDSPV Trigger: TACTGGGCTGTCTTTGCTCCAATATGGTTGTGGAAG...CACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGAACCTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | CGAGGTTCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGATCAGCAGGAGCAAATaGATGCCCACAGCAATTAAC | + |
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Preference number: 4 (lower is better) Translates to: RGSRSRLGAREVGVCVSVISRSK*MPTAIN Trigger: GTTAATTGCTGTGGGCATCCATTTGCTCCTGCTGAT...CACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGAACCTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | GGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGCAGGGGAACAAATATTaGAATACAGGAGAAAGCATT | + |
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Preference number: 4 (lower is better) Translates to: GKGSRSVCLSAHTLRRPWQGNKY*NTGESI Trigger: AATGCTTTCTCCTGTATTCCAATATTTGTTCCCCTG...CCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | TCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACAAGGAGGTTCTGGAACTaGGGTTTCTTCTGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SRSRLGAREVGVCVSVHTRRFWN*GFFCFL Trigger: GAGGAAACAGAAGAAACCCCAGTTCCAGAACCTCCT...TGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | AAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGGCAATGAATATAAACTaGAGAATGTTGACCGAACAC | + |
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Preference number: 4 (lower is better) Translates to: KGSRSVCLSAHTLRRPWWAMNIN*RMLTEH Trigger: GTGTTCGGTCAACATTCTTCAGTTTATATTCATTGC...CCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | TCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACAATCAGCAGGAGCAAATaGATGCCCACAGCAATTAAC | + |
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Preference number: 4 (lower is better) Translates to: SRSRLGAREVGVCVSVHTISRSK*MPTAIN Trigger: GTTAATTGCTGTGGGCATCCATTTGCTCCTGCTGAT...TGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | AGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGCTTTCAATATTTAGTTTaGGTGGAGGAAGGACATACT | + |
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Preference number: 4 (lower is better) Translates to: REVGVCVSVHTHSGGPGGFQYLV*VEEGHT Trigger: AGTATGTCCTTCCTCCACCCAAACTAAATATTGAAA...GCCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CCA 90 bp | TCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACAGGAAACAAAGAACAATaGCATGAAGACCAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRSRLGAREVGVCVSVHTGNKEQ*HEDQKP Trigger: TGGCTTCTGGTCTTCATGCCATTGTTCTTTGTTTCC...TGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | GGTTCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACTGGTTATATGTGTTCTaGGTTGTTCTGCAATCACAT | + |
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Preference number: 4 (lower is better) Translates to: GSRSRLGAREVGVCVSVHWLYVF*VVLQSH Trigger: ATGTGATTGCAGAACAACGCAGAACACATATAACCA...GTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR GCA 90 bp | AGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTGGTTATATGTGTTCTaGGTTGTTCTGCAATCACAT | + |
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Preference number: 4 (lower is better) Translates to: RSRLGAREVGVCVSVHTHWLYVF*VVLQSH Trigger: ATGTGATTGCAGAACAACGCAGAACACATATAACCA...GTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR TCA 90 bp | GTGGGTATCACAGGAATGAGAACACATTTCAGGTACCCATACGAAAGAAATAGGGGAATTTACTCGGGTTaGAGTCCTGAAAGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VGITGMRTHFRYPYERNRGIYSG*SPERGP Trigger: GGGGCCTCTTTCAGGACTTCAACCCGAGTAAATTCC...CCTATTTCTTTCGTATGGGTACCTGAAATGTGTTCTCATTCCTGTGATACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR CCA 90 bp | TCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCTTTCAATATTTAGTTTaGGTGGAGGAAGGACATACT | + |
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Preference number: 4 (lower is better) Translates to: SRLGAREVGVCVSVHTHSFQYLV*VEEGHT Trigger: AGTATGTCCTTCCTCCACCCAAACTAAATATTGAAA...GGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| 3UTR CAA 72 bp | GGAAGTGGTCCCAGAGGAACCACATCATTCAATACTTaGATAGGAATTTTAGCACTAGAAAATCTGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GSGPRGTTSFNT*IGILALENLPR Trigger: TCTGGGCAGATTTTCTAGTGCTAAAATTCCTATCAAAGTATTGAATGATGTGGTTCCTCTGGGACCACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR TCA 90 bp | GGTCCCAGAGGAACCACATCATTCAATACTTTGATAGGAATTTTAGCACTAGAACAAAGAACAATGGCATaGAGACCAGAAGCCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GPRGTTSFNTLIGILALEQRTMA*RPEARN Trigger: ATTTCTGGCTTCTGGTCTTCATGCCATTGTTCTTTG...TTCTAGTGCTAAAATTCCTATCAAAGTATTGAATGATGTGGTTCCTCTGGGACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR CCA 90 bp | GTGGGTATCACAGGAATGAGAACACATTTCAGGTACCCATACGAAAGAAATAGGCAGGGGAACAAATATTaGAATACAGGAGAAAGCATT | + |
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Preference number: 4 (lower is better) Translates to: VGITGMRTHFRYPYERNRQGNKY*NTGESI Trigger: AATGCTTTCTCCTGTATTCCAATATTTGTTCCCCTG...CCTATTTCTTTCGTATGGGTACCTGAAATGTGTTCTCATTCCTGTGATACCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR CAA 90 bp | GGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGGGAGGAAGGACATACTaGCCAGGGCTCTGGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: GKGSRSVCLSAHTLRRPWGGRTY*PGLWVM Trigger: CATCACCCAGAGCCCTGGCAAGTATGTCCTTCCTCC...CCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CAA 90 bp | GTCCGAGGTTCCAGGTCTAGGTTGGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGGAGGAAGGACATACTaGCCAGGGCTCTGGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: VRGSRSRLGAREVGVCVSGGRTY*PGLWVM Trigger: CATCACCCAGAGCCCTGGCAAGTATGTCCTTCCTCC...TGAGACACACACTCCTACTTCCCTTGCCCCCAACCTAGACCTGGAACCTCGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CAA 90 bp | GGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCTGGTGGCGTGGCCAGTGGATAATCTaGTCCAGTCTTAAGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: GSRSVCLSAHTLRRPWWRGQWII*SSLKAM Trigger: CATTGCCTTAAGACTGGACAAGATTATCCACTGGCC...ACGCCACCAGGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114630.3 |
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| CDS-3UTR CAA 90 bp | GGGGGCAAGGGAAGTAGGAGTGTGTGTCTCAGTGCACACACACTCCGGCGGCCCACAGGGGAACAAATATaGGAATACAGGAGAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GGKGSRSVCLSAHTLRRPTGEQI*EYRRKH Trigger: ATGCTTTCTCCTGTATTCCAATATTTGTTCCCCTGT...GGGCCGCCGGAGTGTGTGTGCACTGAGACACACACTCCTACTTCCCTTGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS TCA 90 bp | GAGGATTTCGTGCCCAAACTCCAGTTCCAACTGATGCGCCAACAATaGCCATTAACTTCCACAACCATATTGGAGCAAAGACAGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: EDFVPKLQFQLMRQQ*PLTSTTILEQRQPS Trigger: ACTGGGCTGTCTTTGCTCCAATATGGTTGTGGAAGTTAATGGTCATTGTTGGCGCATCAGTTGGAACTGGAGTTTGGGCACGAAATCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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| CDS-3UTR CAA 90 bp | AAAAATGCTACACTGCTTCCCCTTTCTTCTGAAACAGAACAGGCTCACTGGAGGATTTCAATATTTAGTTaGGGTGGAGGAAGGACATAC | + |
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Preference number: 5 (lower is better) Translates to: KNATLLPLSSETEQAHWRISIFS*GGGRTY Trigger: GTATGTCCTTCCTCCACCCAAACTAAATATTGAAAT...CCTCCAGTGAGCCTGTTCTGTTTCAGAAGAAAGGGGAAGCAGTGTAGCATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS-3UTR CAA 90 bp | GGTCCCAGAGGAACCACATCATTCAATACTTTGATAGGAATTTTAGCACTAGAAACAGGGGAACAAATATaGGAATACAGGAGAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GPRGTTSFNTLIGILALETGEQI*EYRRKH Trigger: ATGCTTTCTCCTGTATTCCAATATTTGTTCCCCTGT...TTCTAGTGCTAAAATTCCTATCAAAGTATTGAATGATGTGGTTCCTCTGGGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101506.10 |
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| CDS TCA 72 bp | GTGCCCAAACTCCAGTTCCAACTGATGCGCCAACAATaGCCATTAACTTCCACAACCATATTGGAGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VPKLQFQLMRQQ*PLTSTTILEQR Trigger: TCTTTGCTCCAATATGGTTGTGGAAGTTAATGGTCATTGTTGGCGCATCAGTTGGAACTGGAGTTTGGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101506.10 ENSMUST00000114630.3 |
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