Pregenerated sensors for TMEM184C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031617Ensembl transcript IDs: ENSMUST00000034030.15, ENSMUST00000141202.2, ENSMUST00000152168.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATCGCCCACGGTGGACAGCAGCATAACGGAAGGATGTGGTTTTGTTaGTCTTTCGCTTCGAGGTGTAATATCAAGTTTGGGAATCGGATT | + |
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Preference number: 5 (lower is better) Translates to: IAHGGQQHNGRMWFC*SFASRCNIKFGNRI Trigger: AATCCGATTCCCAAACTTGATATTACACCTCGAAGCGAAAGATCAACAAAACCACATCCTTCCGTTATGCTGCTGTCCACCGTGGGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS GCA 90 bp | GTCTGTCTGTCAAGCATGACATCCTTGCCTGTGTTAAGTTTTTGTTaGTCTTCTGGGATGTTGATCGTGACGTCTTGTCCGGGATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: VCLSSMTSLPVLSFC*SSGMLIVTSCPGLR Trigger: TCTCAATCCCGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGACAGACAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 90 bp | GTCAAGCATGACATCCTTGCCTGTGTTAAGTTTTTGTTGCTCTTCTaGGATGTTGATCGTGACGTCTTGTCCGGGATTGAGAAGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: VKHDILACVKFLLLF*DVDRDVLSGIEKLL Trigger: CAGAAGCTTCTCAATCCCGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS GCA 90 bp | GATGACGTAAGCTTCGTAACACTCCCTCCAGGTATCCACGTATATTaGAATTTTGGGATATACCAAGGCCACCCAACTATCCACACTGTA | + |
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Preference number: 5 (lower is better) Translates to: DDVSFVTLPPGIHVY*NFGIYQGHPTIHTV Trigger: TACAGTGTGGATAGTTGGGTGGCCTTGGTATATCCCAAAATTGCAATATACGTGGATACCTGGAGGGAGTGTTACGAAGCTTACGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS GCA 90 bp | ACCAAAGTTTCCTTCATCATATACATCAAGGATTTCACATACGAGTaGAGTGACGGTGGTGATCGGTCTGACCACGGTATATTGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TKVSFIIYIKDFTYE*SDGGDRSDHGILQH Trigger: GTGCTGCAATATACCGTGGTCAGACCGATCACCACCGTCACTGCACTCGTATGTGAAATCCTTGATGTATATGATGAAGGAAACTTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 90 bp | AAGCTTCGTAACACTCCCTCCAGGTATCCACGTATATTGCAATTTTaGGATATACCAAGGCCACCCAACTATCCACACTGTATATTGGGA | + |
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Preference number: 5 (lower is better) Translates to: KLRNTPSRYPRILQF*DIPRPPNYPHCILG Trigger: TCCCAATATACAGTGTGGATAGTTGGGTGGCCTTGGTATATCCCAAAATTGCAATATACGTGGATACCTGGAGGGAGTGTTACGAAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS TCA 90 bp | AATCATGATCTTTTCATATATGCTGGCTATAGAAATTGGTCTCGGTaGAGTAATGGTCTGTCTGTCAAGCATGACATCCTTGCCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: NHDLFIYAGYRNWSR*SNGLSVKHDILACV Trigger: AACACAGGCAAGGATGTCATGCTTGACAGACAGACCATTACTTCACCGAGACCAATTTCTATAGCCAGCATATATGAAAAGATCATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 90 bp | AACTATCCACACTGTATATTGGGACCATCCATAGGATCCTTATTATaGGCTTTTGAAGTTCAGGTTGAGTGTAATGTACCAGATGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: NYPHCILGPSIGSLL*AFEVQVECNVPDVE Trigger: TTCAACATCTGGTACATTACACTCAACCTGAACTTCAAAAGCCCATAATAAGGATCCTATGGATGGTCCCAATATACAGTGTGGATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS TCA 90 bp | GTTGAAGGAAATAAAGCCTGTAAAGTAACTATTTGTTCCTGGTCTTaGTATTGGCTATTATCAGGAATTGCGTTCTGTTCTGGGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: VEGNKACKVTICSWS*YWLLSGIAFCSGMS Trigger: TGACATCCCAGAACAGAACGCAATTCCTGATAATAGCCAATATCAAGACCAGGAACAAATAGTTACTTTACAGGCTTTATTTCCTTCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS GCA 90 bp | GGGATGTCAATCATGACATCTTTGCGTTTGTCAATAAGTTTTTGTTaGTCTTCTGGGATGTTAATCATGACATTTTTGCCTGTATCATTA | + |
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Preference number: 5 (lower is better) Translates to: GMSIMTSLRLSISFC*SSGMLIMTFLPVSL Trigger: TAATGATACAGGCAAAAATGTCATGATTAACATCCCAGAAGAGCAACAAAAACTTATTGACAAACGCAAAGATGTCATGATTGACATCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 72 bp | ATTTGGCAAGTTCGCTTTTTCGGTTGTCTTCTCCGCTaGCGCCCTGGAGGTCACCCAGAGTCTCCGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: IWQVRFFGCLLR*RPGGHPESPLH Trigger: ATGCAGCGGAGACTCTGGGTGACCTCCAGGGCGCCAGCGGAGAAGACAACCGAAAAAGCGAACTTGCCAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141202.2 |
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| CDS CAA 90 bp | GGTCTGTCTGTCAAGCATGACATCCTTGCCTGTGTTAAGTTTTTGTaGCTCTTCTGGGATGTTGATCGTGACGTCTTGTCCGGGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: GLSVKHDILACVKFL*LFWDVDRDVLSGIE Trigger: CTCAATCCCGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGACAGACAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 72 bp | GACATCCTTGCCTGTGTTAAGTTTTTGTTGCTCTTCTaGGATGTTGATCGTGACGTCTTGTCCGGGATTGAG | + |
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Preference number: 6 (lower is better) Translates to: DILACVKFLLLF*DVDRDVLSGIE Trigger: CTCAATCCCGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 90 bp | ATGACATCCTTGCCTGTGTTAAGTTTTTGTTGCTCTTCTGGGATGTaGATCGTGACGTCTTGTCCGGGATTGAGAAGCTTCTGTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: MTSLPVLSFCCSSGM*IVTSCPGLRSFCCS Trigger: AGAGCAACAGAAGCTTCTCAATCCCGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 90 bp | AATGGTCTGTCTGTCAAGCATGACATCCTTGCCTGTGTTAAGTTTTaGTTGCTCTTCTGGGATGTTGATCGTGACGTCTTGTCCGGGATT | + |
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Preference number: 6 (lower is better) Translates to: NGLSVKHDILACVKF*LLFWDVDRDVLSGI Trigger: AATCCCGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGACAGACAGACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS TCA 72 bp | GGTGGACAGCAGCATAACGGAAGGATGTGGTTTTGTTaGTCTTTCGCTTCGAGGTGTAATATCAAGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GGQQHNGRMWFC*SFASRCNIKFG Trigger: CCCAAACTTGATATTACACCTCGAAGCGAAAGATCAACAAAACCACATCCTTCCGTTATGCTGCTGTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS GCA 72 bp | AGCTTCGTAACACTCCCTCCAGGTATCCACGTATATTaGAATTTTGGGATATACCAAGGCCACCCAACTATC | + |
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Preference number: 6 (lower is better) Translates to: SFVTLPPGIHVY*NFGIYQGHPTI Trigger: GATAGTTGGGTGGCCTTGGTATATCCCAAAATTGCAATATACGTGGATACCTGGAGGGAGTGTTACGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS GCA 72 bp | TCCTTCATCATATACATCAAGGATTTCACATACGAGTaGAGTGACGGTGGTGATCGGTCTGACCACGGTATA | + |
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Preference number: 6 (lower is better) Translates to: SFIIYIKDFTYE*SDGGDRSDHGI Trigger: TATACCGTGGTCAGACCGATCACCACCGTCACTGCACTCGTATGTGAAATCCTTGATGTATATGATGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS GCA 72 bp | TCAAGCATGACATCCTTGCCTGTGTTAAGTTTTTGTTaGTCTTCTGGGATGTTGATCGTGACGTCTTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SSMTSLPVLSFC*SSGMLIVTSCP Trigger: CGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 72 bp | AACACTCCCTCCAGGTATCCACGTATATTGCAATTTTaGGATATACCAAGGCCACCCAACTATCCACACTGT | + |
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Preference number: 6 (lower is better) Translates to: NTPSRYPRILQF*DIPRPPNYPHC Trigger: ACAGTGTGGATAGTTGGGTGGCCTTGGTATATCCCAAAATTGCAATATACGTGGATACCTGGAGGGAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS CCA 72 bp | GTCTTGTCCGGGATTGAGAAGCTTCTGTTGCTCTTCTaGGATGTCATTCATGATCTCTTCATATATGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VLSGIEKLLLLF*DVIHDLFIYAG Trigger: GCCAGCATATATGAAGAGATCATGAATGACATCCCAGAAGAGCAACAGAAGCTTCTCAATCCCGGACAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 72 bp | GATCGTGACGTCTTGTCCGGGATTGAGAAGCTTCTGTaGCTCTTCTGGGATGTCATTCATGATCTCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: DRDVLSGIEKLL*LFWDVIHDLFI Trigger: TATGAAGAGATCATGAATGACATCCCAGAAGAGCAACAGAAGCTTCTCAATCCCGGACAAGACGTCACGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 72 bp | TTGCCTGTGTTAAGTTTTTGTTGCTCTTCTGGGATGTaGATCGTGACGTCTTGTCCGGGATTGAGAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LPVLSFCCSSGM*IVTSCPGLRSF Trigger: GAAGCTTCTCAATCCCGGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 72 bp | GTCAAGCATGACATCCTTGCCTGTGTTAAGTTTTTGTaGCTCTTCTGGGATGTTGATCGTGACGTCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: VKHDILACVKFL*LFWDVDRDVLS Trigger: GGACAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 72 bp | TGGATAACCTCTCATTGTCCTCCCGACACGCCTTACTaGTTCAGAAATATCATCTCTGATATCGGACACATC | + |
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Preference number: 6 (lower is better) Translates to: WITSHCPPDTPY*FRNIISDIGHI Trigger: GATGTGTCCGATATCAGAGATGATATTTCTGAACAAGTAAGGCGTGTCGGGAGGACAATGAGAGGTTATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 72 bp | TCTGTCAAGCATGACATCCTTGCCTGTGTTAAGTTTTaGTTGCTCTTCTGGGATGTTGATCGTGACGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SVKHDILACVKF*LLFWDVDRDVL Trigger: CAAGACGTCACGATCAACATCCCAGAAGAGCAACAAAAACTTAACACAGGCAAGGATGTCATGCTTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 90 bp | TCGAGTGCTCATTATGATCTGGATCTCCAGGAAAACATTTCTTTTTaGGATAACCTCTCATTGTCCTCCCGACACGCCTTACTTGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SSAHYDLDLQENISF*DNLSLSSRHALLVQ Trigger: CTGAACAAGTAAGGCGTGTCGGGAGGACAATGAGAGGTTATCCAAAAAAGAAATGTTTTCCTGGAGATCCAGATCATAATGAGCACTCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 72 bp | AAAGAAACGAAAACCACGAGTTTTACGCAGAGGAACTaGCCAACAGGTTGTATAGGGCTAAGCTCTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: KETKTTSFTQRN*PTGCIGLSSSF Trigger: AAAGGAAGAGCTTAGCCCTATACAACCTGTTGGCAAGTTCCTCTGCGTAAAACTCGTGGTTTTCGTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS TCA 72 bp | CTTTTCATATATGCTGGCTATAGAAATTGGTCTCGGTaGAGTAATGGTCTGTCTGTCAAGCATGACATCCTT | + |
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Preference number: 6 (lower is better) Translates to: LFIYAGYRNWSR*SNGLSVKHDIL Trigger: AAGGATGTCATGCTTGACAGACAGACCATTACTTCACCGAGACCAATTTCTATAGCCAGCATATATGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS GCA 72 bp | GAATCAGAAGATTCGGTACATAAATCAGAAGACTCCTaGTGTGATTCCGAGGTGTCAATCATGCTATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: ESEDSVHKSEDS*CDSEVSIMLFS Trigger: TGAAAATAGCATGATTGACACCTCGGAATCACAGCAGGAGTCTTCTGATTTATGTACCGAATCTTCTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 72 bp | CACTGTATATTGGGACCATCCATAGGATCCTTATTATaGGCTTTTGAAGTTCAGGTTGAGTGTAATGTACCA | + |
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Preference number: 6 (lower is better) Translates to: HCILGPSIGSLL*AFEVQVECNVP Trigger: TGGTACATTACACTCAACCTGAACTTCAAAAGCCCATAATAAGGATCCTATGGATGGTCCCAATATACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034030.15 ENSMUST00000152168.8 |
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| CDS GCA 72 bp | TTGTTCCTGGTCTTGATATTGGCTATTATCAGGAATTaGGTTCTGTTCTGGGATGTCAATCATGACATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LFLVLILAIIRN*VLFWDVNHDIF Trigger: AAAGATGTCATGATTGACATCCCAGAACAGAACGCAATTCCTGATAATAGCCAATATCAAGACCAGGAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CCA 72 bp | TTGATATTGGCTATTATCAGGAATTGCGTTCTGTTCTaGGATGTCAATCATGACATCTTTGCGTTTGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: LILAIIRNCVLF*DVNHDIFAFVN Trigger: ATTGACAAACGCAAAGATGTCATGATTGACATCCCAGAACAGAACGCAATTCCTGATAATAGCCAATATCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS TCA 72 bp | AATAAAGCCTGTAAAGTAACTATTTGTTCCTGGTCTTaGTATTGGCTATTATCAGGAATTGCGTTCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: NKACKVTICSWS*YWLLSGIAFCS Trigger: AGAACAGAACGCAATTCCTGATAATAGCCAATATCAAGACCAGGAACAAATAGTTACTTTACAGGCTTTATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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| CDS CAA 72 bp | AATCATGACATCTTTGCGTTTGTCAATAAGTTTTTGTaGCTCTTCTGGGATGTTAATCATGACATTTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: NHDIFAFVNKFL*LFWDVNHDIFA Trigger: GGCAAAAATGTCATGATTAACATCCCAGAAGAGCAACAAAAACTTATTGACAAACGCAAAGATGTCATGATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034030.15 |
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