Pregenerated sensors for TMEM184A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036687Ensembl transcript IDs: ENSMUST00000044002.10, ENSMUST00000110832.8, ENSMUST00000146780.3, ENSMUST00000147328.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGTGTCTGGATGGTGCTGTGGTTGGGAACTATGCAGCCTGGGCTaGCCCTTCCCTGAGGAGGCCTGGCTTCCTAGTCTGCACACCTGG | + |
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Preference number: 1 (lower is better) Translates to: LVSGWCCGWELCSLG*PFPEEAWLPSLHTW Trigger: CCAGGTGTGCAGACTAGGAAGCCAGGCCTCCTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCCAACCACAGCACCATCCAGACACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 90 bp | TTGTCCATAGCCACAAGGCGGGGGCAGAGGAAGGCAGCCCCCTGCTaGCTGAGCCCTAAGCCTCTTGTATTTGATGACCGGCAGGCATGG | + |
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Preference number: 1 (lower is better) Translates to: LSIATRRGQRKAAPC*LSPKPLVFDDRQAW Trigger: CCATGCCTGCCGGTCATCAAATACAAGAGGCTTAGGGCTCAGCCAGCAGGGGGCTGCCTTCCTCTGCCCCCGCCTTGTGGCTATGGACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR TCA 90 bp | GGCTGTGCCACGGGAATCATAAACCACTTTAGGGTGGGGCCGACCTaGAGTTCAGAGGGAGGTGACTGCTCCAGCTCCCACCGTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: GCATGIINHFRVGPT*SSEGGDCSSSHRGT Trigger: TGTGCCACGGTGGGAGCTGGAGCAGTCACCTCCCTCTGAACTTCAGGTCGGCCCCACCCTAAAGTGGTTTATGATTCCCGTGGCACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR GCA 90 bp | AGTTTGTCCATAGCCACAAGGCGGGGGCAGAGGAAGGCAGCCCCCTaGTGGCTGAGCCCTAAGCCTCTTGTATTTGATGACCGGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: SLSIATRRGQRKAAP*WLSPKPLVFDDRQA Trigger: TGCCTGCCGGTCATCAAATACAAGAGGCTTAGGGCTCAGCCAGCAGGGGGCTGCCTTCCTCTGCCCCCGCCTTGTGGCTATGGACAAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 90 bp | GTTCAGAGGGAGGTGACTGCTCCAGCTCCCACCGTGGCACAGAGCTaGTCATCTCGTGGCAAAGTCCACCTTCTTTGCCGTATACTGTGC | + |
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Preference number: 1 (lower is better) Translates to: VQREVTAPAPTVAQS*SSRGKVHLLCRILC Trigger: GCACAGTATACGGCAAAGAAGGTGGACTTTGCCACGAGATGACCAGCTCTGTGCCACGGTGGGAGCTGGAGCAGTCACCTCCCTCTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR GCA 90 bp | GCTAGGCTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATaGAAGGGCAAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: ARLPLREPRQLSRLE*KGKGSSSPKIATAR Trigger: CCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAGCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR TCA 90 bp | CCTGTCTTAGCTGCTCCCGATACCCACTCACTCCATAGGCCCCAGTaGACCATCATTCAGAAGACAGGCCCCCACAAGAACAGAAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: PVLAAPDTHSLHRPQ*TIIQKTGPHKNRKP Trigger: GGGCTTTCTGTTCTTGTGGGGGCCTGTCTTCTGAATGATGGTTCACTGGGGCCTATGGAGTGAGTGGGTATCGGGAGCAGCTAAGACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR GCA 90 bp | GCAATAAAGAATTTCCTGTTTGGGATGCTTCTGGTGTCTGGATGGTaGTGTGGTTGGGAACTATGCAGCCTGGGCTGGCCCTTCCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: AIKNFLFGMLLVSGW*CGWELCSLGWPFPE Trigger: CTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCCAACCACAGCACCATCCAGACACCAGAAGCATCCCAAACAGGAAATTCTTTATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR TCA 90 bp | GTACAGAGGTTCCCGGTGCACGTGTGGGTATTTAGTGATGTCAACTaGCTGTCAGAGGCCCAGGAGCCTACTTTGTATCTGGACTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: VQRFPVHVWVFSDVN*LSEAQEPTLYLDLW Trigger: CCACAAGTCCAGATACAAAGTAGGCTCCTGGGCCTCTGACAGTCAGTTGACATCACTAAATACCCACACGTGCACCGGGAACCTCTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR TCA 90 bp | GACATGCTATGCCTGGCCCAGCTTTTCTTTGTAGCAAGTTTCAACTaGTGTACCTCTGAGTGCAGGTGGTGGCGGAGAGGGAAGCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: DMLCLAQLFFVASFN*CTSECRWWRRGKQG Trigger: ACCTTGCTTCCCTCTCCGCCACCACCTGCACTCAGAGGTACATCAGTTGAAACTTGCTACAAAGAAAAGCTGGGCCAGGCATAGCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR TCA 90 bp | TTCAAGTCAGAAACAGCCTCTAGTGAGACCAGGTTTCTCTACAGCTaGCTCCAGCATCCCCTGTCCCCAGCCTATAGCCTACTTCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: FKSETASSETRFLYS*LQHPLSPAYSLLLS Trigger: GGACAGAAGTAGGCTATAGGCTGGGGACAGGGGATGCTGGAGTCAGCTGTAGAGAAACCTGGTCTCACTAGAGGCTGTTTCTGACTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 90 bp | GCCAACCCACAGCTTCACCTGCAGGCTATAATTAAGACATTCCACTaGGTCCTCTGGTTGGTCCAATTTGCCCAGGTGACTTCACTCTGG | + |
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Preference number: 1 (lower is better) Translates to: ANPQLHLQAIIKTFH*VLWLVQFAQVTSLW Trigger: CCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAGGACCCAGTGGAATGTCTTAATTATAGCCTGCAGGTGAAGCTGTGGGTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR CCA 90 bp | TTTGCAATAAAGAATTTCCTGTTTGGGATGCTTCTGGTGTCTGGATaGTGCTGTGGTTGGGAACTATGCAGCCTGGGCTGGCCCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: FAIKNFLFGMLLVSG*CCGWELCSLGWPFP Trigger: AGGGAAGGGCCAGCCCAGGCTGCATAGTTCCCAACCACAGCACCATCCAGACACCAGAAGCATCCCAAACAGGAAATTCTTTATTGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAACTATGCAGCCTGGGCTGGCCCTTCCCTGAGGAGGCCTGGCTTCCTAGTCGCCTACTTCTGTCCCTaGGTGCAATCAGCCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GNYAAWAGPSLRRPGFLVAYFCP*VQSASG Trigger: CCCAGAGGCTGATTGCACCCAGGGACAGAAGTAGGC...GACTAGGAAGCCAGGCCTCCTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGACTCCCCAGCACTCAGTaGCTGGGCCCATCCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LPLREPRQLSRLECKGKGLPSTQ*LGPSCL Trigger: CAGGCAGGATGGGCCCAGTCACTGAGTGCTGGGGAG...TCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGGTGAACATGCAGGACATTGCAAGAGGGCCAGGGTCTGTGTGGGGCAGAGTTGACTGTGTGGGCTaGGGGGCCACCCTCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SWVNMQDIARGPGSVWGRVDCVG*GATLCA Trigger: GGCACAGAGGGTGGCCCCGCAGCCCACACAGTCAAC...TCTGCCCCACACAGACCCTGGCCCTCTTGCAATGTCCTGCATGTTCACCCAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAACTATGCAGCCTGGGCTGGCCCTTCCCTGAGGAGGCCTGGCTTCCTAGTCAGAGATGCTGGTAGGTaGGGGTCCCTGTTTACCACC | + |
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Preference number: 2 (lower is better) Translates to: GNYAAWAGPSLRRPGFLVRDAGR*GSLFTT Trigger: GGTGGTAAACAGGGACCCCCACCTACCAGCATCTCT...GACTAGGAAGCCAGGCCTCCTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCCCTGTCCCCAGCCTATAGCCTACTTCTGTCCCTGGGTGCAATCAGCCTCTAGGAAGGCAGCCCCCTaGTGGCTGAGCCCTAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: IPCPQPIAYFCPWVQSASRKAAP*WLSPKP Trigger: AGGCTTAGGGCTCAGCCAGCAGGGGGCTGCCTTCCT...AGAGGCTGATTGCACCCAGGGACAGAAGTAGGCTATAGGCTGGGGACAGGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAACTATGCAGCCTGGGCTGGCCCTTCCCTGAGGAGGCCTGGCTTCCTAGTCGAACATGCAGGACATTaGAAGAGGGCCAGGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GNYAAWAGPSLRRPGFLVEHAGH*KRARVC Trigger: ACAGACCCTGGCCCTCTTGCAATGTCCTGCATGTTC...GACTAGGAAGCCAGGCCTCCTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | AAGATCAAGATCACAGACTGTTGGCCCCCTGTCTGCCCCCTGCCTCATGGCCACAAGGCAGCCCCCTGCTaGCTGAGCCCTAAGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: KIKITDCWPPVCPLPHGHKAAPC*LSPKPL Trigger: AAGAGGCTTAGGGCTCAGCCAGCAGGGGGCTGCCTT...GTGGCCATGAGGCAGGGGGCAGACAGGGGGCCAACAGTCTGTGATCTTGATCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CAA 90 bp | GAGCCTACTTTGTATCTGGACTTGTGGGCGAGGATCCTATCGAGTTaGTCCATAGCCACAAGGCGGGGGCAGAGGAAGGCAGCCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: EPTLYLDLWARILSS*SIATRRGQRKAAPC Trigger: GCAGGGGGCTGCCTTCCTCTGCCCCCGCCTTGTGGCTATGGACAAACTCGATAGGATCCTCGCCCACAAGTCCAGATACAAAGTAGGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCCAGCACTCAGTGACTGGGCCCATCCTGCCTGGCCATCCCTCTCTGTCGCAGGTGACTTCACTCTaGGCTGTACATGGAATACAG | + |
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Preference number: 2 (lower is better) Translates to: APQHSVTGPILPGHPSLSQVTSL*AVHGIQ Trigger: CTGTATTCCATGTACAGCCCAGAGTGAAGTCACCTG...CGACAGAGAGGGATGGCCAGGCAGGATGGGCCCAGTCACTGAGTGCTGGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | CTATGTGGCTCCCCAGCACTCAGTGACTGGGCCCATCCTGCCTGGCCATCCCTCCAGGTGACTTCACTCTaGGCTGTACATGGAATACAG | + |
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Preference number: 2 (lower is better) Translates to: LCGSPALSDWAHPAWPSLQVTSL*AVHGIQ Trigger: CTGTATTCCATGTACAGCCCAGAGTGAAGTCACCTG...GAGGGATGGCCAGGCAGGATGGGCCCAGTCACTGAGTGCTGGGGAGCCACATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR CAA 90 bp | TACAGGAAGAGACAAGAGAGAAGGCAGGCCCCCAGGCTTGAGTTCTaGGACCAGGCCACGCTAGGCTGTGCCACGGGAATCATAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: YRKRQERRQAPRLEF*DQATLGCATGIINH Trigger: GTGGTTTATGATTCCCGTGGCACAGCCTAGCGTGGCCTGGTCCAAGAACTCAAGCCTGGGGGCCTGCCTTCTCTCTTGTCTCTTCCTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGAAGAGATGCTGGTAGGTaGGGGTCCCTGTTTACCACC | + |
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Preference number: 2 (lower is better) Translates to: LPLREPRQLSRLECKGKGRDAGR*GSLFTT Trigger: GGTGGTAAACAGGGACCCCCACCTACCAGCATCTCT...TCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGATCTTCTCCAGCACTCAGTGACTaGGCCCATCCTGCCTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LREPRQLSRLECKGKGSSPALSD*AHPAWP Trigger: TGGCCAGGCAGGATGGGCCCAGTCACTGAGTGCTGG...AGAAGATCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR CAA 90 bp | CTCAGGGACCTGAGTAATCCTTGTAGGGTGGGCCATGTCACCTGCTaGGTCCCTGGCCTCTCTTGGGTGAACATGCAGGACATTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LRDLSNPCRVGHVTC*VPGLSWVNMQDIAR Trigger: TCTTGCAATGTCCTGCATGTTCACCCAAGAGAGGCCAGGGACCAAGCAGGTGACATGGCCCACCCTACAAGGATTACTCAGGTCCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTGGCTCCCTGGTTGGTCCAATTTaGCCAGGTGACTTCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: KGSSSPKIATARPRLCGSLVGPI*PGDFTL Trigger: CAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAG...GGAGCCACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCAAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTTGTCCATGGAAGGAATaGCCAACCCACAGCTTCACC | + |
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Preference number: 2 (lower is better) Translates to: KGKGSSSPKIATARPRLCCPWKE*PTHSFT Trigger: GGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACA...ACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGATGTCTCTTCTGTCCATaGAAGGAATGGCCAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: LPLREPRQLSRLECKGKGCLFCP*KEWPTH Trigger: GTGGGTTGGCCATTCCTTCCATGGACAGAAGAGACA...TCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGAATTAAGACATTCCACTaGGTCCTCTGGTTGGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LPLREPRQLSRLECKGKGIKTFH*VLWLVQ Trigger: TTGGACCAACCAGAGGACCCAGTGGAATGTCTTAAT...TCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGATGTCAACTGACTGTCAGAGGCCCAGGAGCCTACTTTGTATCTGGACTAGCCTCCCTGGGCACTaGACCTGGTATACAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LVMSTDCQRPRSLLCIWTSLPGH*TWYTGR Trigger: TCTTCCTGTATACCAGGTCCAGTGCCCAGGGAGGCT...AGTCCAGATACAAAGTAGGCTCCTGGGCCTCTGACAGTCAGTTGACATCACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGCCACACCCACACCAGATCCACTCGGCACAGTGATCAGCACAAGTTCCCTTTGTCTGATATTGTaGGCTGTGGGAACTAACAAC | + |
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Preference number: 2 (lower is better) Translates to: KEATPTPDPLGTVISTSSLCLIL*AVGTNN Trigger: GTTGTTAGTTCCCACAGCCCACAATATCAGACAAAG...GGAACTTGTGCTGATCACTGTGCCGAGTGGATCTGGTGTGGGTGTGGCCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CAA 90 bp | CTTCACCTGCAGGCTATAATTAAGACATTCCACTGGGTCCTCTGGTaGGTCCAATTTGCCCAGGTGACTTCACTCTGGGCTGTACATGGA | + |
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Preference number: 2 (lower is better) Translates to: LHLQAIIKTFHWVLW*VQFAQVTSLWAVHG Trigger: TCCATGTACAGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAGGACCCAGTGGAATGTCTTAATTATAGCCTGCAGGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGATGTCAACTGACTGTCAGAGGCCCAGGAGCCTACTTTGTATCTGGACTCTTTCTAGGTTAGAATaGAAGGGCAAGGGATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LVMSTDCQRPRSLLCIWTLSRLE*KGKGSS Trigger: AGAAGATCCCTTGCCCTTGCATTCTAACCTAGAAAG...AGTCCAGATACAAAGTAGGCTCCTGGGCCTCTGACAGTCAGTTGACATCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 72 bp | AGGCCCAGGCTATGTGGCTCCCCAGCACTCAGTGACTaGGCCCATCCTGCCTGGCCATCCCTCTCTGTCGCT | + |
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Preference number: 3 (lower is better) Translates to: RPRLCGSPALSD*AHPAWPSLSVA Trigger: AGCGACAGAGAGGGATGGCCAGGCAGGATGGGCCCAGTCACTGAGTGCTGGGGAGCCACATAGCCTGGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| 3UTR TCA 72 bp | CAAGGCGGGGGCAGAGGAAGGCAGCCCCCTGCTGGCTaGGCCCTAAGCCTCTTGTATTTGATGACCGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QGGGRGRQPPAG*ALSLLYLMTGR Trigger: CCTGCCGGTCATCAAATACAAGAGGCTTAGGGCTCAGCCAGCAGGGGGCTGCCTTCCTCTGCCCCCGCCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 72 bp | GCAGAAGGTTGTGCCAGGACAAGTCCACTTACTGCCTaGCAAGCAGCCCACTCCTCGCACCCCATGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: AEGCARTSPLTA*QAAHSSHPMGW Trigger: CCAGCCCATGGGGTGCGAGGAGTGGGCTGCTTGCCAGGCAGTAAGTGGACTTGTCCTGGCACAACCTTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 72 bp | GGATGGTGCTGTGGTTGGGAACTATGCAGCCTGGGCTaGCCCTTCCCTGAGGAGGCCTGGCTTCCTAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: GWCCGWELCSLG*PFPEEAWLPSL Trigger: CAGACTAGGAAGCCAGGCCTCCTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCCAACCACAGCACCATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 72 bp | GTGGGCCATGTCACCTGCTTGGTCCCTGGCCTCTCTTaGGTGAACATGCAGGACATTGCAAGAGGGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: VGHVTCLVPGLS*VNMQDIARGPG Trigger: CCCTGGCCCTCTTGCAATGTCCTGCATGTTCACCCAAGAGAGGCCAGGGACCAAGCAGGTGACATGGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CAA 90 bp | GCCACACCCACACCAGATCCACTCGGCACAGTGATCAGCACAAGTTCCAAATGGGGCAGGCCCCCAGGCTaGAGTTCTTGGACCAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: ATPTPDPLGTVISTSSKWGRPPG*SSWTRP Trigger: TGGCCTGGTCCAAGAACTCAAGCCTGGGGGCCTGCC...CCATTTGGAACTTGTGCTGATCACTGTGCCGAGTGGATCTGGTGTGGGTGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR TCA 72 bp | GCCATGTCACCTGCTTGGTCCCTGGCCTCTCTTGGGTaGACATGCAGGACATTGCAAGAGGGCCAGGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: AMSPAWSLASLG*TCRTLQEGQGL Trigger: CAGACCCTGGCCCTCTTGCAATGTCCTGCATGTTCACCCAAGAGAGGCCAGGGACCAAGCAGGTGACATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR GCA 72 bp | AATGGCAGAAGGTTGTGCCAGGACAAGTCCACTTACTaGCTGGCAAGCAGCCCACTCCTCGCACCCCATGGG | + |
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Preference number: 3 (lower is better) Translates to: NGRRLCQDKSTY*LASSPLLAPHG Trigger: CCCATGGGGTGCGAGGAGTGGGCTGCTTGCCAGGCAGTAAGTGGACTTGTCCTGGCACAACCTTCTGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR-3UTR CAA 90 bp | GCCACACCCACACCAGATCCACTCGGCACAGTGATCAGCACAAGTTCCAAATGGGGCTCTCGGGAGAGGTaGGGCCTCTGTCAAGAGATG | + |
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Preference number: 3 (lower is better) Translates to: ATPTPDPLGTVISTSSKWGSRER*GLCQEM Trigger: CATCTCTTGACAGAGGCCCAACCTCTCCCGAGAGCC...CCATTTGGAACTTGTGCTGATCACTGTGCCGAGTGGATCTGGTGTGGGTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR CCA 72 bp | TTTGGGATGCTTCTGGTGTCTGGATGGTGCTGTGGTTaGGAACTATGCAGCCTGGGCTGGCCCTTCCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: FGMLLVSGWCCG*ELCSLGWPFPE Trigger: CTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCCAACCACAGCACCATCCAGACACCAGAAGCATCCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR TCA 72 bp | ACGGGAATCATAAACCACTTTAGGGTGGGGCCGACCTaGAGTTCAGAGGGAGGTGACTGCTCCAGCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: TGIINHFRVGPT*SSEGGDCSSSH Trigger: GTGGGAGCTGGAGCAGTCACCTCCCTCTGAACTTCAGGTCGGCCCCACCCTAAAGTGGTTTATGATTCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| 3UTR TCA 72 bp | GTCTCCATGTTTCCAAGGCCGGTGTGGCTGGAATACTaGGTCTATCTTAGCCTCCCTGGGCACTGGACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSMFPRPVWLEY*VYLSLPGHWTW Trigger: CCAGGTCCAGTGCCCAGGGAGGCTAAGATAGACTCAGTATTCCAGCCACACCGGCCTTGGAAACATGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR GCA 72 bp | CCGTCTGTAGCCACCAGGGCCCTGGGGGACATGCTATaGCTGGCCCAGCTTTTCTTTGTAGCAAGTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSVATRALGDML*LAQLFFVASFN Trigger: GTTGAAACTTGCTACAAAGAAAAGCTGGGCCAGGCATAGCATGTCCCCCAGGGCCCTGGTGGCTACAGACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | TCCAGCTCCCACCGTGGCACAGAGCTGGTCATCTCGTaGCAAAGTCCACCTTCTTTGCCGTATACTGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSHRGTELVIS*QSPPSLPYTVQ Trigger: CTGCACAGTATACGGCAAAGAAGGTGGACTTTGCCACGAGATGACCAGCTCTGTGCCACGGTGGGAGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | CTGGACTTGAATGAGACTGAAGCCCCGCCCCCTCCCTaGTACTCCAATCGCATCCCAGCATTCTTTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LDLNETEAPPPP*YSNRIPAFFEQ Trigger: CTGCTCAAAGAATGCTGGGATGCGATTGGAGTACCAGGGAGGGGGCGGGGCTTCAGTCTCATTCAAGTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | CACAGACTGTTGGCCCCCTGTCTGCCCCCTGCCTCATaGCCACCACCTAATTTATTGCTGTACATGTTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: HRLLAPCLPPAS*PPPNLLLYMLP Trigger: CGGCAACATGTACAGCAATAAATTAGGTGGTGGCCATGAGGCAGGGGGCAGACAGGGGGCCAACAGTCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR TCA 72 bp | AGGAGGCCACACCCACACCAGATCCACTCGGCACAGTaGTCAGCACAAGTTCCAAATGGCTGTTACGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RRPHPHQIHSAQ*SAQVPNGCYAV Trigger: GACTGCGTAACAGCCATTTGGAACTTGTGCTGATCACTGTGCCGAGTGGATCTGGTGTGGGTGTGGCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR GCA 72 bp | AATTTCCTGTTTGGGATGCTTCTGGTGTCTGGATGGTaGTGTGGTTGGGAACTATGCAGCCTGGGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NFLFGMLLVSGW*CGWELCSLGWP Trigger: GGGCCAGCCCAGGCTGCATAGTTCCCAACCACAGCACCATCCAGACACCAGAAGCATCCCAAACAGGAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTGGTCCAATTTGCCCAGGTGACTTCACTCTGGGCTGTACATGGAATACAGGCTCTCGGGAGAGGTaGGGCCTCTGTCAAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LVGPICPGDFTLGCTWNTGSRER*GLCQEM Trigger: CATCTCTTGACAGAGGCCCAACCTCTCCCGAGAGCC...TGTATTCCATGTACAGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR TCA 72 bp | TGCCTGGCCCAGCTTTTCTTTGTAGCAAGTTTCAACTaGTGTACCTCTGAGTGCAGGTGGTGGCGGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CLAQLFFVASFN*CTSECRWWRRG Trigger: CCCTCTCCGCCACCACCTGCACTCAGAGGTACATCAGTTGAAACTTGCTACAAAGAAAAGCTGGGCCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR GCA 72 bp | CCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATaGAAGGGCAAGGGATCTTCTTCACCCAAGATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLREPRQLSRLE*KGKGSSSPKIA Trigger: GGCTATCTTGGGTGAAGAAGATCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | CTCTGGTTGGTCCAATTTGCCCAGGTGACTTCACTCTaGGCTGTACATGGAATACAGAGGCCCTGTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LWLVQFAQVTSL*AVHGIQRPCEA Trigger: AGCCTCACAGGGCCTCTGTATTCCATGTACAGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | CTGCCTTTGTCTCCATGTTTCCAAGGCCGGTGTGGCTaGAATACTGAGTCTATCTTAGCCTCCCTGGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: LPLSPCFQGRCG*NTESILASLGT Trigger: AGTGCCCAGGGAGGCTAAGATAGACTCAGTATTCCAGCCACACCGGCCTTGGAAACATGGAGACAAAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR GCA 72 bp | CACACCTTCCCAGTGCCTAGGTACAGAGGTTCCCGGTaGACGTGTGGGTATTTAGTGATGTCAACTGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: HTFPVPRYRGSR*TCGYLVMSTDC Trigger: ACAGTCAGTTGACATCACTAAATACCCACACGTGCACCGGGAACCTCTGTACCTAGGCACTGGGAAGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | TCAGAGGCCCAGGAGCCTACTTTGTATCTGGACTTGTaGGCGAGGATCCTATCGAGTTTGTCCATAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SEAQEPTLYLDL*ARILSSLSIAT Trigger: TGTGGCTATGGACAAACTCGATAGGATCCTCGCCCACAAGTCCAGATACAAAGTAGGCTCCTGGGCCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | ACTGACTGTCAGAGGCCCAGGAGCCTACTTTGTATCTaGACTTGTGGGCGAGGATCCTATCGAGTTTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TDCQRPRSLLCI*TCGRGSYRVCP Trigger: TGGACAAACTCGATAGGATCCTCGCCCACAAGTCCAGATACAAAGTAGGCTCCTGGGCCTCTGACAGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | AAGAATTTCCTGTTTGGGATGCTTCTGGTGTCTGGATaGTGCTGTGGTTGGGAACTATGCAGCCTGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: KNFLFGMLLVSG*CCGWELCSLGW Trigger: CCAGCCCAGGCTGCATAGTTCCCAACCACAGCACCATCCAGACACCAGAAGCATCCCAAACAGGAAATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR TCA 72 bp | TTCCCGGTGCACGTGTGGGTATTTAGTGATGTCAACTaGCTGTCAGAGGCCCAGGAGCCTACTTTGTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: FPVHVWVFSDVN*LSEAQEPTLYL Trigger: CAGATACAAAGTAGGCTCCTGGGCCTCTGACAGTCAGTTGACATCACTAAATACCCACACGTGCACCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR GCA 72 bp | ACTTGTTTAATATCTTTGGTTAGCACACCTTCCCAGTaGCTAGGTACAGAGGTTCCCGGTGCACGTGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCLISLVSTPSQ*LGTEVPGARVG Trigger: ACCCACACGTGCACCGGGAACCTCTGTACCTAGGCACTGGGAAGGTGTGCTAACCAAAGATATTAAACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | CTGCAGGCTATAATTAAGACATTCCACTGGGTCCTCTaGTTGGTCCAATTTGCCCAGGTGACTTCACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LQAIIKTFHWVL*LVQFAQVTSLW Trigger: CCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAGGACCCAGTGGAATGTCTTAATTATAGCCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CCA 72 bp | CAGCTTCACCTGCAGGCTATAATTAAGACATTCCACTaGGTCCTCTGGTTGGTCCAATTTGCCCAGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: QLHLQAIIKTFH*VLWLVQFAQVT Trigger: AGTCACCTGGGCAAATTGGACCAACCAGAGGACCCAGTGGAATGTCTTAATTATAGCCTGCAGGTGAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGGGGTCCCGGGGTGGGTACTGGGTaGTGGGTGCCCACCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRERLGLCQEMLVGGGPGVGTG*WVPTLA Trigger: GGCCAGGGTGGGCACCCAGCACCCAGTACCCACCCC...GGGACCCCCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCGAGAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCCAGCACTCAGTGACTGGGCCCATCCTGCCTGGCCATCCCTCTCTGTCGCACGCGCTCCATCTGTaGCCCGGCTGCCACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: APQHSVTGPILPGHPSLSHALHL*PGCHCG Trigger: CCCACAGTGGCAGCCGGGCCACAGATGGAGCGCGTG...CGACAGAGAGGGATGGCCAGGCAGGATGGGCCCAGTCACTGAGTGCTGGGGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACTATGCAGCCTGGGCTGGCCCTTCCCTGAGGAGGCCTGGCTTCCTAGTCTCCAGAGCCACTGGCTaGGCCGGGGTGGGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNYAAWAGPSLRRPGFLVSRATG*AGVGTG Trigger: CCCAGTACCCACCCCGGCCCAGCCAGTGGCTCTGGA...GACTAGGAAGCCAGGCCTCCTCAGGGAAGGGCCAGCCCAGGCTGCATAGTTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTGAGGCTCTCGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGCATCTGTGGCCCGGCTaGCACTGTGGGCATTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVRLSGEVGPLSRDAGRWHLWPG*HCGHCR Trigger: CCGGCAATGCCCACAGTGGCAGCCGGGCCACAGATG...CCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCGAGAGCCTCACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGGGGTCCCTGAACGCCTCGGGCCAATaGGCTGGTGAGGAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGEVGPLSRDAGRWGSLNASGQ*AGEEEL Trigger: CAGCTCTTCCTCACCAGCGCATTGGCCCGAGGCGTT...CAGGGACCCCCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTGGCTCCGTACTGGGTGCTGGGTaGCCACCCTGGCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSSSPKIATARPRLCGSVLGAG*PPWPGP Trigger: TGGGCCTGGCCAGGGTGGGCACCCAGCACCCAGTAC...GGAGCCACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTGTCTCTTCTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCACTGGCTGGGCCGGGGTaGGTACTGGGTGCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPVSSVHGRNGQPTASPALAGPG*VLGAGC Trigger: GCACCCAGCACCCAGTACCCACCCCGGCCCAGCCAG...TGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAGAAGAGACAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTCTGGCTGGGCCGGGGTaGGTACTGGGTGCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGKGSSSPKIATARPRLCLAGPG*VLGAGC Trigger: GCACCCAGCACCCAGTACCCACCCCGGCCCAGCCAG...ACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTTGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGACACCTCCAGAGCCACTaGCTGGGCCGGGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLREPRQLSRLECKGKGHLQSH*LGRGGY Trigger: GTACCCACCCCGGCCCAGCCAGTGGCTCTGGAGGTG...TCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR TCA 90 bp | CGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGGGGTCCCTGTTTACAAGGAGGAGGAGGCTaGGCCAGGAGTCGAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RERLGLCQEMLVGGGPCLQGGGG*ARSRRR Trigger: ACGCCTTCGACTCCTGGCTCAGCCTCCTCCTCCTTG...TAAACAGGGACCCCCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATCCCTCTCTGTCGCTGCTCAGCGTAAGATCTAACCACCTGTCTCTTCTGGTACTGGGTGCTGGGTaGCCACCCTGGCCAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHPSLSLLSVRSNHLSLLVLGAG*PPWPGP Trigger: TGGGCCTGGCCAGGGTGGGCACCCAGCACCCAGTAC...CAGAAGAGACAGGTGGTTAGATCTTACGCTGAGCAGCGACAGAGAGGGATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTGTCTCTTCTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCAGTGGGTACTGGGTGCTaGGTGCCCACCCTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPVSSVHGRNGQPTASPAVGTGC*VPTLAR Trigger: CCTGGCCAGGGTGGGCACCCAGCACCCAGTACCCAC...TGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAGAAGAGACAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTTCCAGAGCCACTGGCTaGGCCGGGGTGGGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KGKGSSSPKIATARPRLCSRATG*AGVGTG Trigger: CCCAGTACCCACCCCGGCCCAGCCAGTGGCTCTGGA...ACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTTGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCAAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTCACCTCCAGAGCCACTaGCTGGGCCGGGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGKGSSSPKIATARPRLCHLQSH*LGRGGY Trigger: GTACCCACCCCGGCCCAGCCAGTGGCTCTGGAGGTG...ACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTTGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CAA 72 bp | AGACAAGAGAGAAGGCAGGCCCCCAGGCTTGAGTTCTaGGACCAGGCCACGCTAGGCTGTGCCACGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RQERRQAPRLEF*DQATLGCATGI Trigger: GATTCCCGTGGCACAGCCTAGCGTGGCCTGGTCCAAGAACTCAAGCCTGGGGGCCTGCCTTCTCTCTTGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | CTATGTGGCTCCCCAGCACTCAGTGACTGGGCCCATCCTGCCTGGCCATCCCTCGCCAACAGCATTCCCTaGCAGAAGGAGAGGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LCGSPALSDWAHPAWPSLANSIP*QKERKM Trigger: CATCTTCCTCTCCTTCTGGCAGGGAATGCTGTTGGC...GAGGGATGGCCAGGCAGGATGGGCCCAGTCACTGAGTGCTGGGGAGCCACATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR TCA 90 bp | CCACCTGTCTCTTCTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCACAAGGAGGAGGAGGCTaGGCCAGGAGTCGAAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPVSSVHGRNGQPTASPAQGGGG*ARSRRR Trigger: ACGCCTTCGACTCCTGGCTCAGCCTCCTCCTCCTTG...TGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAGAAGAGACAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCTCTGGTTGGTCCAATTTGCCCAGGTGACTTCACTCTGGGCTGTACATCATCTGTGGCCCGGCTaGCACTGTGGGCATTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WVLWLVQFAQVTSLWAVHHLWPG*HCGHCR Trigger: CCGGCAATGCCCACAGTGGCAGCCGGGCCACAGATG...ATGTACAGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAGGACCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGAAGAGACAAGAGAGAAGGCAGGCCCCCAGGCTTGAGTTCTTGGACCAGGAACGCCTCGGGCCAATaGGCTGGTGAGGAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGRDKREGRPPGLSSWTRNASGQ*AGEEEL Trigger: CAGCTCTTCCTCACCAGCGCATTGGCCCGAGGCGTT...CCTGGTCCAAGAACTCAAGCCTGGGGGCCTGCCTTCTCTCTTGTCTCTTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCAGGCTATAATGGGGTGGGTACTGGGTaGTGGGTGCCCACCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGRNGQPTASPAGYNGVGTG*WVPTLA Trigger: GGCCAGGGTGGGCACCCAGCACCCAGTACCCACCCC...ATTATAGCCTGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATCCCTCTCTGTCGCTGCTCAGCGTAAGATCTAACCACCTGTCTCTTCTGCCTGGACCTCAGGGATaGCCCCACACCTCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHPSLSLLSVRSNHLSLLPGPQG*PHTSPR Trigger: TCTTGGAGAGGTGTGGGGTCATCCCTGAGGTCCAGG...CAGAAGAGACAGGTGGTTAGATCTTACGCTGAGCAGCGACAGAGAGGGATGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTTGGTCCAATTTGCCCAGGTGACTTCACTCTGGGCTGTACATGGAATACACACGCGCTCCATCTGTaGCCCGGCTGCCACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LVGPICPGDFTLGCTWNTHALHL*PGCHCG Trigger: CCCACAGTGGCAGCCGGGCCACAGATGGAGCGCGTG...TGTATTCCATGTACAGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGGGGTCCCTGCGTTTCTCTATGTTaGGACTCTTCTTACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRERLGLCQEMLVGGGPCVSLC*DSSYHL Trigger: GAGGTGGTAAGAAGAGTCGCAACATAGAGAAACGCA...GGGACCCCCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCGAGAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCAGGCTATAATTAAGGTGCCGTCCACGGCCTaGACCTCAGGGATGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSMEGMANPQLHLQAIIKVPSTA*TSGMTP Trigger: TGGGGTCATCCCTGAGGTCCAGGCCGTGGACGGCAC...CTTAATTATAGCCTGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCAGGCTATAATGTGCCGTCCACGGCCTaGACCTCAGGGATGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGRNGQPTASPAGYNVPSTA*TSGMTP Trigger: TGGGGTCATCCCTGAGGTCCAGGCCGTGGACGGCAC...ATTATAGCCTGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CAA 72 bp | CTGAGTAATCCTTGTAGGGTGGGCCATGTCACCTGCTaGGTCCCTGGCCTCTCTTGGGTGAACATGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSNPCRVGHVTC*VPGLSWVNMQD Trigger: GTCCTGCATGTTCACCCAAGAGAGGCCAGGGACCAAGCAGGTGACATGGCCCACCCTACAAGGATTACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAGGCCACACCCACACCAGATCCACTCGGCACAGTGATCAGCACAAGTTCCAGCCGCTGTGGATGTTaGAGTCCCCATCGTGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: KEATPTPDPLGTVISTSSSRCGC*SPHRGI Trigger: AATACCACGATGGGGACTTCAACATCCACAGCGGCT...GGAACTTGTGCTGATCACTGTGCCGAGTGGATCTGGTGTGGGTGTGGCCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | GGAATGGCCAACCCACAGCTTCACCTGCAGGCTATAATTAAGACATTCCACTGGAGGCCTAGCCTCCTCTaGGGCAGCCTGGCTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GMANPQLHLQAIIKTFHWRPSLL*GSLAGH Trigger: ATGACCAGCCAGGCTGCCCCAGAGGAGGCTAGGCCT...CCAGTGGAATGTCTTAATTATAGCCTGCAGGTGAAGCTGTGGGTTGGCCATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044002.10 |
||
| CDS-3UTR CCA 90 bp | CCCTGTTTACCACCCCAGAAACCCAGGCAAGCTGGATCCCCAGCTAGGTTCCACCAGGAGCTTCATGTGTaGACTGCTGTGTGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCLPPQKPRQAGSPARFHQELHV*TAVCTA Trigger: AGCAGTACACACAGCAGTCCACACATGAAGCTCCTG...GTGGAACCTAGCTGGGGATCCAGCTTGCCTGGGTTTCTGGGGTGGTAAACAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTAAGACATTCCACTGGGTCCTCTGGTTGGTCCAATTTGCCCAGGTGACTGTGGGTACTGGGTGCTaGGTGCCCACCCTGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIKTFHWVLWLVQFAQVTVGTGC*VPTLAR Trigger: CCTGGCCAGGGTGGGCACCCAGCACCCAGTACCCAC...AGTCACCTGGGCAAATTGGACCAACCAGAGGACCCAGTGGAATGTCTTAATTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CAA 72 bp | TTGTATCTGGACTTGTGGGCGAGGATCCTATCGAGTTaGTCCATAGCCACAAGGCGGGGGCAGAGGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLDLWARILSS*SIATRRGQRKA Trigger: TGCCTTCCTCTGCCCCCGCCTTGTGGCTATGGACAAACTCGATAGGATCCTCGCCCACAAGTCCAGATACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGGGGTCCCTGTATTTGTCAAAAGCCTaGAGGATGATGGTGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGEVGPLSRDAGRWGSLYLSKA*RMMVIS Trigger: GCTGATCACCATCATCCTCCAGGCTTTTGACAAATA...CAGGGACCCCCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CAA 72 bp | ACACTGTTCCTGGGTGGGTGGCATTTCTGTCTGCCTTaGTCTCCATGTTTCCAAGGCCGGTGTGGCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLFLGGWHFCLP*SPCFQGRCGWN Trigger: ATTCCAGCCACACCGGCCTTGGAAACATGGAGACAAAGGCAGACAGAAATGCCACCCACCCAGGAACAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| 3UTR CAA 72 bp | CTGTCAGAGGCCCAGGAGCCTACTTTGTATCTGGACTaGTGGGCGAGGATCCTATCGAGTTTGTCCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSEAQEPTLYLD*WARILSSLSIA Trigger: GGCTATGGACAAACTCGATAGGATCCTCGCCCACAAGTCCAGATACAAAGTAGGCTCCTGGGCCTCTGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGAGCATCTCAACACAGATaGGGAAATTCTGGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLREPRQLSRLECKGKGASQHR*GNSGSQ Trigger: CTGGCTACCAGAATTTCCTCATCTGTGTTGAGATGC...TCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CCACCTGTCTCTTCTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCACAGGAGCTTCATGTGTaGACTGCTGTGTGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPVSSVHGRNGQPTASPAQELHV*TAVCTA Trigger: AGCAGTACACACAGCAGTCCACACATGAAGCTCCTG...TGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAGAAGAGACAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CAA 72 bp | GGACTAGTGCTGAGGATGGCTCAGTTGCTAAAGTGCTaGCCTTGTAGGCATGAGGACCTGGGTTCAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVLRMAQLLKC*PCRHEDLGSIP Trigger: AGGGATTGAACCCAGGTCCTCATGCCTACAAGGCAAGCACTTTAGCAACTGAGCCATCCTCAGCACTAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR TCA 90 bp | CTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGATCTTCTAGCCGCTGTGGATGTTaGAGTCCCCATCGTGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LREPRQLSRLECKGKGSSSRCGC*SPHRGI Trigger: AATACCACGATGGGGACTTCAACATCCACAGCGGCT...AGAAGATCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCAAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTCTGAGGGAATCAGCATaGGTTTCTCTATGTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KGKGSSSPKIATARPRLCLRESA*VSLCCD Trigger: GTCGCAACATAGAGAAACGCATGCTGATTCCCTCAG...ACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTTGCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGATTGAAGTCCCCATCGTaGTATTTGTCAAAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLREPRQLSRLECKGKGLKSPS*YLSKAW Trigger: CCAGGCTTTTGACAAATACCACGATGGGGACTTCAA...TCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAGGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTCCTCTGGTTGGTCCAATTTGCCCAGGTGACTTCACTCTGGGCTGTACATCTGAGGGAATCAGCATaGGTTTCTCTATGTTGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: WVLWLVQFAQVTSLWAVHLRESA*VSLCCD Trigger: GTCGCAACATAGAGAAACGCATGCTGATTCCCTCAG...ATGTACAGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAGGACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGTGAACATGCAGGACATTGCAAGAGGGCCAGGGTCTGTGTGGGGCAGATATTTGTCAAAAGCCTaGAGGATGATGGTGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWVNMQDIARGPGSVWGRYLSKA*RMMVIS Trigger: GCTGATCACCATCATCCTCCAGGCTTTTGACAAATA...TCTGCCCCACACAGACCCTGGCCCTCTTGCAATGTCCTGCATGTTCACCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTCTGGTTGGTCCAATTTGCCCAGGTGACTTCACTCTGGGCTGTACATGCGAGAAGTTATGAATaGCGTCCTGGACAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVLWLVQFAQVTSLWAVHARSYE*RPGQCP Trigger: AGGACATTGTCCAGGACGCCATTCATAACTTCTCGC...ATGTACAGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAGGACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| 3UTR CAA 72 bp | CAGGCTATAATTAAGACATTCCACTGGGTCCTCTGGTaGGTCCAATTTGCCCAGGTGACTTCACTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAIIKTFHWVLW*VQFAQVTSLWA Trigger: AGCCCAGAGTGAAGTCACCTGGGCAAATTGGACCAACCAGAGGACCCAGTGGAATGTCTTAATTATAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGTCCATGGAAGGAATGGCCAACCCACAGCTTCACCTGCAGGCTATAATGCATCTCAACACAGATaGGGAAATTCTGGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGRNGQPTASPAGYNASQHR*GNSGSQ Trigger: CTGGCTACCAGAATTTCCTCATCTGTGTTGAGATGC...ATTATAGCCTGCAGGTGAAGCTGTGGGTTGGCCATTCCTTCCATGGACAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGAGAGCCTCGCCAACTTTCTAGGTTAGAATGCAAGGGCAAGGGATCTTCTTGCGTTTCTCTATGTTaGGACTCTTCTTACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LREPRQLSRLECKGKGSSCVSLC*DSSYHL Trigger: GAGGTGGTAAGAAGAGTCGCAACATAGAGAAACGCA...AGAAGATCCCTTGCCCTTGCATTCTAACCTAGAAAGTTGGCGAGGCTCTCGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | GGAATGGCCAACCCACAGCTTCACCTGCAGGCTATAATTAAGACATTCCACTGGGCGAGAAGTTATGAATaGCGTCCTGGACAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GMANPQLHLQAIIKTFHWARSYE*RPGQCP Trigger: AGGACATTGTCCAGGACGCCATTCATAACTTCTCGC...CCAGTGGAATGTCTTAATTATAGCCTGCAGGTGAAGCTGTGGGTTGGCCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CCA 90 bp | GGAATGGCCAACCCACAGCTTCACCTGCAGGCTATAATTAAGACATTCCACTGGTTGAAGTCCCCATCGTaGTATTTGTCAAAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GMANPQLHLQAIIKTFHWLKSPS*YLSKAW Trigger: CCAGGCTTTTGACAAATACCACGATGGGGACTTCAA...CCAGTGGAATGTCTTAATTATAGCCTGCAGGTGAAGCTGTGGGTTGGCCATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS GCA 90 bp | CTTACCACCTCCAGAGCCACTGGCTGGGCCGGGGTGGGTACTGGGTaGTGGGTGCCCACCCTGGCCAGGCCCAGGAGCTTCATGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTTSRATGWAGVGTG*WVPTLARPRSFMCG Trigger: TCCACACATGAAGCTCCTGGGCCTGGCCAGGGTGGGCACCCAGCACCCAGTACCCACCCCGGCCCAGCCAGTGGCTCTGGAGGTGGTAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS CCA 90 bp | AACACGCCTGAAACGCCTCGGGCCAATGCGCTGGTGAGGAAGAGCTaGGGGGCCCCCTGCGAGCCGTTGTCCACGCGCTCCATCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NTPETPRANALVRKS*GAPCEPLSTRSICG Trigger: GCCACAGATGGAGCGCGTGGACAACGGCTCGCAGGGGGCCCCCCAGCTCTTCCTCACCAGCGCATTGGCCCGAGGCGTTTCAGGCGTGTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 ENSMUST00000146780.3 |
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| CDS CCA 90 bp | CCAGCGGCTAGGGTACCAGCCCCAACCCTGGTGCCGTCCACGGCCTaGACCTCAGGGATGACCCCACACCTCTCCAAGATGGCCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PAARVPAPTLVPSTA*TSGMTPHLSKMANS Trigger: GCTGTTGGCCATCTTGGAGAGGTGTGGGGTCATCCCTGAGGTCCAGGCCGTGGACGGCACCAGGGTTGGGGCTGGTACCCTAGCCGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS TCA 90 bp | AGGCGTAACGCAGCGCGAGGGAGGCGAACAGCATCTCAACACAGATaGGGAAATTCTGGTAGCCAGCGGCTAGGGTACCAGCCCCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: RRNAARGRRTASQHR*GNSGSQRLGYQPQP Trigger: GGGTTGGGGCTGGTACCCTAGCCGCTGGCTACCAGAATTTCCTCATCTGTGTTGAGATGCTGTTCGCCTCCCTCGCGCTGCGTTACGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS-3UTR CAA 90 bp | CCTGTGAGGCTCTCGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGGCCACTGGATATGCTTaGCATAGGTGCTGGCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVRLSGEVGPLSRDAGRWATGYA*HRCWRD Trigger: GTCCCGCCAGCACCTATGCAAAGCATATCCAGTGGC...CCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCGAGAGCCTCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS CCA 90 bp | GTGCTGGCGGGACTGGTGAGTTCTTCTTCTCTGAATACACCTGGCTaGGGAAGGCGTAACGCAGCGCGAGGGAGGCGAACAGCATCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLAGLVSSSSLNTPG*GRRNAARGRRTASQ Trigger: TTGAGATGCTGTTCGCCTCCCTCGCGCTGCGTTACGCCTTCCCCAGCCAGGTGTATTCAGAGAAGAAGAACTCACCAGTCCCGCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS-3UTR CAA 90 bp | CTATGTGGCTCCCCAGCACTCAGTGACTGGGCCCATCCTGCCTGGCCATCCCTCTCCCCATCGTGGTATTaGTCAAAAGCCTGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LCGSPALSDWAHPAWPSLSPSWY*SKAWRM Trigger: CATCCTCCAGGCTTTTGACAAATACCACGATGGGGA...GAGGGATGGCCAGGCAGGATGGGCCCAGTCACTGAGTGCTGGGGAGCCACATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS-3UTR CAA 90 bp | CCTGTGAGGCTCTCGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGTGGAGTGTGGCCTGTTaGCAGAAGCGTAAGAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVRLSGEVGPLSRDAGRWWSVAC*QKRKNV Trigger: CACGTTCTTACGCTTCTGCAAACAGGCCACACTCCA...CCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCGAGAGCCTCACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS-3UTR CAA 90 bp | AAGGGATCTTCTTCACCCAAGATAGCCACAGCCAGGCCCAGGCTATGTGGCTCCGCCACTGGATATGCTTaGCATAGGTGCTGGCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KGSSSPKIATARPRLCGSATGYA*HRCWRD Trigger: GTCCCGCCAGCACCTATGCAAAGCATATCCAGTGGC...GGAGCCACATAGCCTGGGCCTGGCTGTGGCTATCTTGGGTGAAGAAGATCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS-3UTR CAA 90 bp | CGGGAGAGGTTGGGCCTCTGTCAAGAGATGCTGGTAGGTGGGGGTCCCTGTTTATTGATGGTGAGGAACTaGAGTACCGGCTCGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RERLGLCQEMLVGGGPCLLMVRN*STGSKG Trigger: ACCCTTCGAGCCGGTACTCAAGTTCCTCACCATCAA...TAAACAGGGACCCCCACCTACCAGCATCTCTTGACAGAGGCCCAACCTCTCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS-3UTR CAA 90 bp | ATCCCCTGTCCCCAGCCTATAGCCTACTTCTGTCCCTGGGTGCAATCAGCCTCTTCCCCATCGTGGTATTaGTCAAAAGCCTGGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: IPCPQPIAYFCPWVQSASSPSWY*SKAWRM Trigger: CATCCTCCAGGCTTTTGACAAATACCACGATGGGGA...AGAGGCTGATTGCACCCAGGGACAGAAGTAGGCTATAGGCTGGGGACAGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGGTGAACATGCAGGACATTGCAAGAGGGCCAGGGTCTGTGTGGGGCAGAAGGAAGATGATGGCTTaGATGGTGAGGAACTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SWVNMQDIARGPGSVWGRRKMMA*MVRNLS Trigger: ACTCAAGTTCCTCACCATCAAAGCCATCATCTTCCT...TCTGCCCCACACAGACCCTGGCCCTCTTGCAATGTCCTGCATGTTCACCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110832.8 |
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| CDS GCA 90 bp | ATGTCCTGTGGGCTGATGGTCTCCTTTAAGCCACTGGATATGCTTTaGATAGGTGCTGGCGGGACTGGTGAGTTCTTCTTCTCTGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: MSCGLMVSFKPLDML*IGAGGTGEFFFSEY Trigger: GTATTCAGAGAAGAAGAACTCACCAGTCCCGCCAGCACCTATGCAAAGCATATCCAGTGGCTTAAAGGAGACCATCAGCCCACAGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGTGTTTATCTATAAATAAGCAGATAGTTGCTGGTAGGCTGGCGCACTGGTGGAGTGTGGCCTGTTaGCAGAAGCGTAAGAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARCLSINKQIVAGRLAHWWSVAC*QKRKNV Trigger: CACGTTCTTACGCTTCTGCAAACAGGCCACACTCCA...CCAGTGCGCCAGCCTACCAGCAACTATCTGCTTATTTATAGATAAACACCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS GCA 90 bp | CCCCAGATATTGGAAGCACAAGGTCAGGAAACTGTAGATGACAAATaGTTCGTAGCAGTCTCGCACAGAGTCGAAGTAGACGTAGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQILEAQGQETVDDK*FVAVSHRVEVDVVR Trigger: CCTTACTACGTCTACTTCGACTCTGTGCGAGACTGCTACGAAGCATTTGTCATCTACAGTTTCCTGACCTTGTGCTTCCAATATCTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGGTGTTTATCTATAAATAAGCAGATAGTTGCTGGTAGGCTGGCGCACTGGAGGAAGATGATGGCTTaGATGGTGAGGAACTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARCLSINKQIVAGRLAHWRKMMA*MVRNLS Trigger: ACTCAAGTTCCTCACCATCAAAGCCATCATCTTCCT...CCAGTGCGCCAGCCTACCAGCAACTATCTGCTTATTTATAGATAAACACCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS CCA 72 bp | GGCCCCCTGCGAGCCGTTGTCCACGCGCTCCATCTGTaGCCCGGCTGCCACTGTGGGCATTGCCGGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPLRAVVHALHL*PGCHCGHCRRG Trigger: CCCCCTCCGGCAATGCCCACAGTGGCAGCCGGGCCACAGATGGAGCGCGTGGACAACGGCTCGCAGGGGGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 ENSMUST00000146780.3 ENSMUST00000147328.2 |
||
| CDS CCA 72 bp | GAAACGCCTCGGGCCAATGCGCTGGTGAGGAAGAGCTaGGGGGCCCCCTGCGAGCCGTTGTCCACGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ETPRANALVRKS*GAPCEPLSTRS Trigger: GGAGCGCGTGGACAACGGCTCGCAGGGGGCCCCCCAGCTCTTCCTCACCAGCGCATTGGCCCGAGGCGTTTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 ENSMUST00000146780.3 ENSMUST00000147328.2 |
||
| CDS CCA 72 bp | GTTGCGACTCTTCTTACCACCTCCAGAGCCACTGGCTaGGCCGGGGTGGGTACTGGGTGCTGGGTGCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VATLLTTSRATG*AGVGTGCWVPT Trigger: GGTGGGCACCCAGCACCCAGTACCCACCCCGGCCCAGCCAGTGGCTCTGGAGGTGGTAAGAAGAGTCGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS TCA 72 bp | GCAGCGCGAGGGAGGCGAACAGCATCTCAACACAGATaGGGAAATTCTGGTAGCCAGCGGCTAGGGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: AARGRRTASQHR*GNSGSQRLGYQ Trigger: CTGGTACCCTAGCCGCTGGCTACCAGAATTTCCTCATCTGTGTTGAGATGCTGTTCGCCTCCCTCGCGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS CCA 72 bp | GGACTGGTGAGTTCTTCTTCTCTGAATACACCTGGCTaGGGAAGGCGTAACGCAGCGCGAGGGAGGCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: GLVSSSSLNTPG*GRRNAARGRRT Trigger: TGTTCGCCTCCCTCGCGCTGCGTTACGCCTTCCCCAGCCAGGTGTATTCAGAGAAGAAGAACTCACCAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS TCA 72 bp | ACTGGAGTGTGGCCTGTTTGCAGAAGCGTAAGAACGTaGTGGAGTAGGACATACCACGGAGGCAGCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGVWPVCRSVRT*WSRTYHGGSRS Trigger: GGACCTGCTGCCTCCGTGGTATGTCCTACTCCATCACGTTCTTACGCTTCTGCAAACAGGCCACACTCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS CAA 72 bp | AAGGAGAGGAAGATGATGGCTTTGATGGTGAGGAACTaGAGTACCGGCTCGAAGGGTCTCAGGAGGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KERKMMALMVRN*STGSKGLRRSL Trigger: CAGGGACCTCCTGAGACCCTTCGAGCCGGTACTCAAGTTCCTCACCATCAAAGCCATCATCTTCCTCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS GCA 72 bp | GGGCTGATGGTCTCCTTTAAGCCACTGGATATGCTTTaGATAGGTGCTGGCGGGACTGGTGAGTTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLMVSFKPLDML*IGAGGTGEFFF Trigger: GAAGAAGAACTCACCAGTCCCGCCAGCACCTATGCAAAGCATATCCAGTGGCTTAAAGGAGACCATCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
||
| CDS CAA 72 bp | AGGTCCTCTGAGGGAATCAGCATGCGTTTCTCTATGTaGCGACTCTTCTTACCACCTCCAGAGCCACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSSEGISMRFSM*RLFLPPPEPLA Trigger: AGCCAGTGGCTCTGGAGGTGGTAAGAAGAGTCGCAACATAGAGAAACGCATGCTGATTCCCTCAGAGGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS TCA 72 bp | CCAGATATTGGAAGCACAAGGTCAGGAAACTGTAGATaGCAAATGCTTCGTAGCAGTCTCGCACAGAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PDIGSTRSGNCR*QMLRSSLAQSR Trigger: TCGACTCTGTGCGAGACTGCTACGAAGCATTTGTCATCTACAGTTTCCTGACCTTGTGCTTCCAATATCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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| CDS GCA 72 bp | TTGGAAGCACAAGGTCAGGAAACTGTAGATGACAAATaGTTCGTAGCAGTCTCGCACAGAGTCGAAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LEAQGQETVDDK*FVAVSHRVEVD Trigger: GTCTACTTCGACTCTGTGCGAGACTGCTACGAAGCATTTGTCATCTACAGTTTCCTGACCTTGTGCTTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044002.10 ENSMUST00000110832.8 |
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