Pregenerated sensors for TMEM182 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079588Ensembl transcript IDs: ENSMUST00000114765.4
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCAACCCAGCCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTaGCTCAGTGTTGTCTTTCCTTCTTGCTACAACTGGAGAATTCAT | + |
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Preference number: 1 (lower is better) Translates to: SQPSLPRAPSMSSSP*LSVVFPSCYNWRIH Trigger: ATGAATTCTCCAGTTGTAGCAAGAAGGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGGCTGGGTTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR GCA 90 bp | GCTACAACTGGAGAATTCATTGTGGGGTCCCCAACAAAGCCTGAGTaGTGTGTGTTTCTCAGTGCCTCACAGACATCAAACCCTTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: ATTGEFIVGSPTKPE*CVFLSASQTSNPSL Trigger: CAAGGAAGGGTTTGATGTCTGTGAGGCACTGAGAAACACACAGCACTCAGGCTTTGTTGGGGACCCCACAATGAATTCTCCAGTTGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CCA 90 bp | CCTCAGTGTTGTCTTTCCTTCTTGCTACAACTGGAGAATTCATTGTaGGGTCCCCAACAAAGCCTGAGTGCTGTGTGTTTCTCAGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: PQCCLSFLLQLENSL*GPQQSLSAVCFSVP Trigger: AGGCACTGAGAAACACACAGCACTCAGGCTTTGTTGGGGACCCCACAATGAATTCTCCAGTTGTAGCAAGAAGGAAAGACAACACTGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR GCA 90 bp | GAAGCAGAAGTGAATGTCAAGGAGACAATCAACATAGGCTTGGTTTaGTGTGGGCGATCACATAAGCACCCTGCGTTTACTTCAAAATGT | + |
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Preference number: 1 (lower is better) Translates to: EAEVNVKETINIGLV*CGRSHKHPAFTSKC Trigger: ACATTTTGAAGTAAACGCAGGGTGCTTATGTGATCGCCCACAGCAAACCAAGCCTATGTTGATTGTCTCCTTGACATTCACTTCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CAA 90 bp | GCCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTaGTCTTTCCTTCTTGCTACAACTGGAGAATTCATTGTGGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: AFPEHLPCRHPPASV*SFLLATTGEFIVGS Trigger: GGACCCCACAATGAATTCTCCAGTTGTAGCAAGAAGGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTTGTCTTTCCTTCCCAACAAAGCCTGAGTaGTGTGTGTTTCTCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SQSTFHVVIPLPQCCLSFPTKPE*CVFLSA Trigger: GGCACTGAGAAACACACAGCACTCAGGCTTTGTTGG...GAAGGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR TCA 90 bp | CATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACCTTCCGTCCCCAACAAAGCCTaGGTGCTGTGTGTTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HHHYTYKKSQPSLPRAPSVPNKA*VLCVSQ Trigger: CTGAGAAACACACAGCACTCAGGCTTTGTTGGGGAC...GGAAGGTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CAA 90 bp | GAGTGCTGTGTGTTTCTCAGTGCCTCACAGACATCAAACCCTTCCTaGATGGAAACTTCCAGAATGCAAGTACCAGTAGAGGGGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ECCVFLSASQTSNPS*METSRMQVPVEGSL Trigger: AAGGCTCCCCTCTACTGGTACTTGCATTCTGGAAGTTTCCATCAAGGAAGGGTTTGATGTCTGTGAGGCACTGAGAAACACACAGCACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CAA 90 bp | CTGCCTCAGTGTTGTCTTTCCTTCTTGCTACAACTGGAGAATTCATaGTGGGGTCCCCAACAAAGCCTGAGTGCTGTGTGTTTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LPQCCLSFLLQLENS*WGPQQSLSAVCFSV Trigger: CACTGAGAAACACACAGCACTCAGGCTTTGTTGGGGACCCCACAATGAATTCTCCAGTTGTAGCAAGAAGGAAAGACAACACTGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTATAAAGCAGGCTGTAGGGAGAGCTGAGGCAGCATCATCACTATACCTACTGTGTGTTTCTCAGTaGCTCACAGACATCAAACCC | + |
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Preference number: 2 (lower is better) Translates to: LCIKQAVGRAEAASSLYLLCVSQ*LTDIKP Trigger: GGGTTTGATGTCTGTGAGGCACTGAGAAACACACAG...TAGGTATAGTGATGATGCTGCCTCAGCTCTCCCTACAGCCTGCTTTATACACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR GCA 90 bp | CATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACCTTCCCACAAAACCTTTTCTTaGAGGAGGTTAGAGGAGATT | + |
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Preference number: 2 (lower is better) Translates to: HHHYTYKKSQPSLPRAPSHKTFS*RRLEEI Trigger: AATCTCCTCTAACCTCCTGCAAGAAAAGGTTTTGTG...GGAAGGTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGAATCATTGGCTCACAGAAGTCAGGGGGATGAGTGTCTGGCTATGTGTGCAGCCCAGACAGCTTTaGGTTCTTGAAAAGTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LVNHWLTEVRGMSVWLCVQPRQL*VLEKSK Trigger: TTTTGACTTTTCAAGAACCCAAAGCTGTCTGGGCTG...CACACATAGCCAGACACTCATCCCCCTGACTTCTGTGAGCCAATGATTCACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGTACCAGTAGAGGGGAGCCTTTTGTATCTGGCCTTGATTTCAATCAAGAGTGTGTGGGCATGTAGGTaGAGAAGAAACAAAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QVPVEGSLLYLALISIKSVWACR*RRNKAS Trigger: ACTGGCTTTGTTTCTTCTCCACCTACATGCCCACAC...ACTCTTGATTGAAATCAAGGCCAGATACAAAAGGCTCCCCTCTACTGGTACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR GCA 90 bp | GTATCTGGCCTTGATTTCAATCAAGAGTCCTGGCAAATGATCCTTTTTGATATAGGAGAACTAGTTCATTaGCAGCCCAGACAGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: VSGLDFNQESWQMILFDIGELVH*QPRQLW Trigger: CCAAAGCTGTCTGGGCTGGCAATGAACTAGTTCTCC...TATATCAAAAAGGATCATTTGCCAGGACTCTTGATTGAAATCAAGGCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCATGTACGCCAAAGAGGATGAAATTGAGGGATAATATGCAATCAAATGACAAATTAGTGAATCATTaGCTCACAGAAGTCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LACTPKRMKLRDNMQSNDKLVNH*LTEVRG Trigger: CCCCCTGACTTCTGTGAGCCAATGATTCACTAATTT...GTCATTTGATTGCATATTATCCCTCAATTTCATCCTCTTTGGCGTACATGCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR GCA 90 bp | CAAATGGAATTATGTGCTAAGCTGAGGCTGTTGGCTTTTACAAATTTTAAACCTGCATTATATGCACTTTaGTGTGTGGATTTCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: QMELCAKLRLLAFTNFKPALYAL*CVDFLS Trigger: ACTCAGGAAATCCACACAGCAAAGTGCATATAATGC...AGGTTTAAAATTTGTAAAAGCCAACAGCCTCAGCTTAGCACATAATTCCATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR GCA 72 bp | AGCCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTaGCTCAGTGTTGTCTTTCCTTCTTGCTACAACTGG | + |
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Preference number: 3 (lower is better) Translates to: SLPRAPSMSSSP*LSVVFPSCYNW Trigger: CCAGTTGTAGCAAGAAGGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTTGTCTTTCCACAATCAACATAGGCTaGGTTTGCTGTGGGCGATCA | + |
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Preference number: 3 (lower is better) Translates to: PSQSTFHVVIPLPQCCLSTINIG*VCCGRS Trigger: TGATCGCCCACAGCAAACCAAGCCTATGTTGATTGT...GGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTTGTCTTTCCTTCCCACAAAACCTTTTCTaGCAGGAGGTTAGAGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: SQSTFHVVIPLPQCCLSFPQNLF*QEVRGD Trigger: ATCTCCTCTAACCTCCTGCAAGAAAAGGTTTTGTGG...GAAGGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAGCATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACGTAGAGGGGAGCCTTTaGTATCTGGCCTTGATTTCA | + |
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Preference number: 3 (lower is better) Translates to: GSIITIPIRRANPAFPEHVEGSL*YLALIS Trigger: TGAAATCAAGGCCAGATACAAAAGGCTCCCCTCTAC...GTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR TCA 72 bp | AACTGGAGAATTCATTGTGGGGTCCCCAACAAAGCCTaGGTGCTGTGTGTTTCTCAGTGCCTCACAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: NWRIHCGVPNKA*VLCVSQCLTDI Trigger: GATGTCTGTGAGGCACTGAGAAACACACAGCACTCAGGCTTTGTTGGGGACCCCACAATGAATTCTCCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR GCA 72 bp | GGAGAATTCATTGTGGGGTCCCCAACAAAGCCTGAGTaGTGTGTGTTTCTCAGTGCCTCACAGACATCAAAC | + |
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Preference number: 3 (lower is better) Translates to: GEFIVGSPTKPE*CVFLSASQTSN Trigger: GTTTGATGTCTGTGAGGCACTGAGAAACACACAGCACTCAGGCTTTGTTGGGGACCCCACAATGAATTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTTGTCTTTCCGCTAAGCTGAGGCTGTaGGCTTTTACAAATTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: PSQSTFHVVIPLPQCCLSAKLRL*AFTNFK Trigger: TTTAAAATTTGTAAAAGCCAACAGCCTCAGCTTAGC...GGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR GCA 72 bp | AAACACCCTCATGGTTTAGTAGGTAGCTCAGGCTCCTaGTACCTTTCCAAGTCTCCCCCTGTGTATAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: KHPHGLVGSSGS*YLSKSPPVYKA Trigger: TGCTTTATACACAGGGGGAGACTTGGAAAGGTAGCAGGAGCCTGAGCTACCTACTAAACCATGAGGGTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CAA 90 bp | GCTCCTGCTACCTTTCCAAGTCTCCCCCTGTGTATAAAGCAGGCTGTAGGGAGATGTTGTCTTTCCTTCTaGCTACAACTGGAGAATTCA | + |
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Preference number: 3 (lower is better) Translates to: APATFPSLPLCIKQAVGRCCLSF*LQLENS Trigger: TGAATTCTCCAGTTGTAGCAAGAAGGAAAGACAACA...TCTCCCTACAGCCTGCTTTATACACAGGGGGAGACTTGGAAAGGTAGCAGGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CCA 72 bp | TGTCTTTCCTTCTTGCTACAACTGGAGAATTCATTGTaGGGTCCCCAACAAAGCCTGAGTGCTGTGTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: CLSFLLQLENSL*GPQQSLSAVCF Trigger: GAAACACACAGCACTCAGGCTTTGTTGGGGACCCCACAATGAATTCTCCAGTTGTAGCAAGAAGGAAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CCA 72 bp | CCTGGAGAACTAGTTCATTGCCAGCCCAGACAGCTTTaGGTTCTTGAAAAGTCAAAAGATCTCCTTTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PGELVHCQPRQL*VLEKSKDLLCE Trigger: CTCACAAAGGAGATCTTTTGACTTTTCAAGAACCCAAAGCTGTCTGGGCTGGCAATGAACTAGTTCTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR-3UTR CAA 90 bp | GTATCTGGCCTTGATTTCAATCAAGAGTCCTGGCAAATGATCCTTTTTGATATAGTTGTCATGGCCCTTTaGAACTCAGGAGTTCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: VSGLDFNQESWQMILFDIVVMAL*NSGVQS Trigger: GCTCTGAACTCCTGAGTTCAAAAGGGCCATGACAAC...TATATCAAAAAGGATCATTTGCCAGGACTCTTGATTGAAATCAAGGCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR TCA 72 bp | TATCTGGCCTTGATTTCAATCAAGAGTCCTGGCAAATaGTCCTTTTTGATATACAAAATGCCTGTGCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: YLALISIKSPGK*SFLIYKMPVLV Trigger: CACTAGCACAGGCATTTTGTATATCAAAAAGGATCATTTGCCAGGACTCTTGATTGAAATCAAGGCCAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR TCA 72 bp | ATATCAATGTCCTTGAAATGGTTTGTGATTGTGAATTaGGCTAAACCCCTGGAGTGTTACAAACAGCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: ISMSLKWFVIVN*AKPLECYKQLV Trigger: TACCAGCTGTTTGTAACACTCCAGGGGTTTAGCTCAATTCACAATCACAAACCATTTCAAGGACATTGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR GCA 72 bp | ATAATGGCACGCCATAGCTTAATATCACAGGATATATaGATAACAGAATCAAGCCAAAGAAAGCCAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: IMARHSLISQDI*ITESSQRKPKS Trigger: GCTTTTTGGCTTTCTTTGGCTTGATTCTGTTATGCATATATCCTGTGATATTAAGCTATGGCGTGCCATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CCA 72 bp | ACTTTTACTAGAAACAGCTTGCATGAGAAATTTAAATaGCATACAGTCCTGAAAAGGGTTCCATCCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: TFTRNSLHEKFK*HTVLKRVPSQR Trigger: TCTTTGGGATGGAACCCTTTTCAGGACTGTATGCCATTTAAATTTCTCATGCAAGCTGTTTCTAGTAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR TCA 72 bp | ATAACAGAATCAAGCCAAAGAAAGCCAAAAAGCAAATaGGCCAATATCAAAAGGAAACAGAAGATGACATTG | + |
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Preference number: 3 (lower is better) Translates to: ITESSQRKPKSK*ANIKRKQKMTL Trigger: CAATGTCATCTTCTGTTTCCTTTTGATATTGGCTCATTTGCTTTTTGGCTTTCTTTGGCTTGATTCTGTTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTTGTCTTTCCAGGGGGCTGCACAGATaGTCAGAAAGCTTGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: PSQSTFHVVIPLPQCCLSRGLHR*SESLQS Trigger: TGACTGCAAGCTTTCTGATCATCTGTGCAGCCCCCT...GGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR TCA 90 bp | CCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTTGTCTTTCCACAGGATGGAAGGGGTaGATTCCCAGCAGTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PSQSTFHVVIPLPQCCLSTGWKG*IPSSLS Trigger: TGAGAGACTGCTGGGAATTCACCCCTTCCATCCTGT...GGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR CCA 90 bp | CCTTCCCAGAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTTGTCTTTCCTGGATGGTGGCTGATTaGTGTACCAGAACTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSQSTFHVVIPLPQCCLSWMVAD*CTRTSR Trigger: TCTGGAAGTTCTGGTACACCAATCAGCCACCATCCA...GGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTCTGGGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR CCA 90 bp | CTCCCTGGAGAACTAGTTCATTGCCAGCCCAGACAGCTTTGGGTTCTTGAAAAGCGGAGTCGTAGGAGGTaGAGTTGTGCTCTCCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPGELVHCQPRQLWVLEKRSRRR*SCALPS Trigger: TGAGGGGAGAGCACAACTCCACCTCCTACGACTCCG...CTTTTCAAGAACCCAAAGCTGTCTGGGCTGGCAATGAACTAGTTCTCCAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR TCA 90 bp | CATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACCTTCCCCTCCACAACGCCACTaGACCAGCACCTCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HHHYTYKKSQPSLPRAPSPPQRH*TSTSRK Trigger: TTTTCTGGAGGTGCTGGTTCAGTGGCGTTGTGGAGG...GGAAGGTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR GCA 90 bp | CATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACCTTCCGTTCACCTGAACACCTaGCCACTTCAGTCGCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HHHYTYKKSQPSLPRAPSVHLNT*PLQSRE Trigger: TTCTCGCGACTGAAGTGGGCAGGTGTTCAGGTGAAC...GGAAGGTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR GCA 90 bp | GGCAGCATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACTTCCATGTCAGCCACTaGCTGGACCCAGATGACATA | + |
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Preference number: 4 (lower is better) Translates to: GSIITIPIRRANPAFPEHFHVSH*LDPDDI Trigger: TATGTCATCTGGGTCCAGGCAGTGGCTGACATGGAA...GTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR CCA 90 bp | GGCAGCATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACCGTGTGTGCAGTTCTTaGATGGTGGCTGATTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GSIITIPIRRANPAFPEHRVCSS*MVADWC Trigger: ACACCAATCAGCCACCATCCAAGAACTGCACACACG...GTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR CCA 90 bp | GGCAGCATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACATGTCAGCCACTGCCTaGACCCAGATGACATACAGT | + |
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Preference number: 4 (lower is better) Translates to: GSIITIPIRRANPAFPEHMSATA*TQMTYS Trigger: ACTGTATGTCATCTGGGTCCAGGCAGTGGCTGACAT...GTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR CCA 90 bp | CATCATCACTATACCTATAAGAAGAGCCAACCCAGCCTTCCCAGAGCACCTTCCTGTGCAGTTCTTGGATaGTGGCTGATTGGTGTACCA | + |
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Preference number: 4 (lower is better) Translates to: HHHYTYKKSQPSLPRAPSCAVLG*WLIGVP Trigger: TGGTACACCAATCAGCCACCATCCAAGAACTGCACA...GGAAGGTGCTCTGGGAAGGCTGGGTTGGCTCTTCTTATAGGTATAGTGATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CAA 72 bp | GAGCACCTTCCATGTCGTCATCCCCCTGCCTCAGTGTaGTCTTTCCTTCTTGCTACAACTGGAGAATTCATT | + |
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Preference number: 4 (lower is better) Translates to: EHLPCRHPPASV*SFLLATTGEFI Trigger: AATGAATTCTCCAGTTGTAGCAAGAAGGAAAGACAACACTGAGGCAGGGGGATGACGACATGGAAGGTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR CCA 90 bp | AAGGAGACAATCAACATAGGCTTGGTTTGCTGTGGGCGATCACATAAGCACCCTGCAGTTCTTGGATGGTaGCTGATTGGTGTACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KETINIGLVCCGRSHKHPAVLGW*LIGVPE Trigger: TTCTGGTACACCAATCAGCCACCATCCAAGAACTGC...AGGGTGCTTATGTGATCGCCCACAGCAAACCAAGCCTATGTTGATTGTCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR TCA 90 bp | ATGGCCCTTTTGAACTCAGGAGTTCAGAGCTCCAATAACAAGAACAACTGCTATCTGCCTGGACCCAGATaGCATACAGTATCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: MALLNSGVQSSNNKNNCYLPGPR*HTVSPP Trigger: TGGTGGTGATACTGTATGTCATCTGGGTCCAGGCAG...ATAGCAGTTGTTCTTGTTATTGGAGCTCTGAACTCCTGAGTTCAAAAGGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CAA 72 bp | GTGTTTCTCAGTGCCTCACAGACATCAAACCCTTCCTaGATGGAAACTTCCAGAATGCAAGTACCAGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: VFLSASQTSNPS*METSRMQVPVE Trigger: CTCTACTGGTACTTGCATTCTGGAAGTTTCCATCAAGGAAGGGTTTGATGTCTGTGAGGCACTGAGAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR TCA 90 bp | CCTGCGTTTACTTCAAAATGTATGATAGATCCACTACCTGCTCCCTGGAGAACTTATATTCTGTTCACCTaGACACCTGCCCACTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: PAFTSKCMIDPLPAPWRTYILFT*TPAHFS Trigger: ACTGAAGTGGGCAGGTGTTCAGGTGAACAGAATATA...AGTTCTCCAGGGAGCAGGTAGTGGATCTATCATACATTTTGAAGTAAACGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR GCA 90 bp | CTGGCATGTACGCCAAAGAGGATGAAATTGAGGGATAATATGCAATCAAATGACGATGATCAGAAAGCTTaGAGTCAAGGCGGCCACTAC | + |
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Preference number: 4 (lower is better) Translates to: LACTPKRMKLRDNMQSNDDDQKA*SQGGHY Trigger: GTAGTGGCCGCCTTGACTGCAAGCTTTCTGATCATC...GTCATTTGATTGCATATTATCCCTCAATTTCATCCTCTTTGGCGTACATGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS-3UTR GCA 90 bp | GCCATGGTCTTCATAAAGCAAGGCTATTATAATCCTCACATGGAAGTATCTGGAACTGGAAAAGGGGGCTaGACAGATGATCAGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: AMVFIKQGYYNPHMEVSGTGKGG*TDDQKA Trigger: AGCTTTCTGATCATCTGTGCAGCCCCCTTTTCCAGT...TCCAGATACTTCCATGTGAGGATTATAATAGCCTTGCTTTATGAAGACCATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| 3UTR CAA 72 bp | AGAGTAACCACATTTGGTATTGTTGTCATGGCCCTTTaGAACTCAGGAGTTCAGAGCTCCAATAACAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: RVTTFGIVVMAL*NSGVQSSNNKN Trigger: GTTCTTGTTATTGGAGCTCTGAACTCCTGAGTTCAAAAGGGCCATGACAACAATACCAAATGTGGTTACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS GCA 90 bp | AAAGCTTGCAGTCAAGGCGGCCACTACCCCCAGGAGCAGCAGGACTaGCCAGAAGCCACGGTAAATAATTGCGGAGTCGTAGGAGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: KACSQGGHYPQEQQD*PEATVNNCGVVGGG Trigger: TCCACCTCCTACGACTCCGCAATTATTTACCGTGGCTTCTGGGCAGTCCTGCTGCTCCTGGGGGTAGTGGCCGCCTTGACTGCAAGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS TCA 90 bp | TCAAGGCTCTGTAGCTTTCCATGTCAGCCACTGCCTGGACCCAGATaGCATACAGTATCACCACCAGGGAAAACAGGACACCTGAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SRLCSFPCQPLPGPR*HTVSPPGKTGHLRQ Trigger: TTGCCTCAGGTGTCCTGTTTTCCCTGGTGGTGATACTGTATGTCATCTGGGTCCAGGCAGTGGCTGACATGGAAAGCTACAGAGCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS TCA 90 bp | TCCACAACGCCACTGAACCAGCACCTCCAGAAAAAGCCTTCATGGTaGAAAGTGATGTTCTCTATATTCTGTTCACCTGAACACCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: STTPLNQHLQKKPSW*KVMFSIFCSPEHLP Trigger: GGGCAGGTGTTCAGGTGAACAGAATATAGAGAACATCACTTTTCACCATGAAGGCTTTTTCTGGAGGTGCTGGTTCAGTGGCGTTGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS CCA 72 bp | CGGGGACAGGTAAGCGTGTGTGCAGTTCTTGGATGGTaGCTGATTGGTGTACCAGAACTTCCAGATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RGQVSVCAVLGW*LIGVPELPDVG Trigger: TCCAACATCTGGAAGTTCTGGTACACCAATCAGCCACCATCCAAGAACTGCACACACGCTTACCTGTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS TCA 72 bp | TGTAGCTTTCCATGTCAGCCACTGCCTGGACCCAGATaGCATACAGTATCACCACCAGGGAAAACAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: CSFPCQPLPGPR*HTVSPPGKTGH Trigger: GTGTCCTGTTTTCCCTGGTGGTGATACTGTATGTCATCTGGGTCCAGGCAGTGGCTGACATGGAAAGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS CCA 72 bp | GTACGGGGACAGGTAAGCGTGTGTGCAGTTCTTGGATaGTGGCTGATTGGTGTACCAGAACTTCCAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: VRGQVSVCAVLG*WLIGVPELPDV Trigger: AACATCTGGAAGTTCTGGTACACCAATCAGCCACCATCCAAGAACTGCACACACGCTTACCTGTCCCCGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS TCA 72 bp | TCCAGATGTTGGAGTTGTTCTCCTCCACAACGCCACTaGACCAGCACCTCCAGAAAAAGCCTTCATGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: SRCWSCSPPQRH*TSTSRKSLHGE Trigger: TTCACCATGAAGGCTTTTTCTGGAGGTGCTGGTTCAGTGGCGTTGTGGAGGAGAACAACTCCAACATCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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| CDS TCA 72 bp | ATGGTGAAAAGTGATGTTCTCTATATTCTGTTCACCTaGACACCTGCCCACTTCAGTCGCGAGAAGCCAATA | + |
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Preference number: 6 (lower is better) Translates to: MVKSDVLYILFT*TPAHFSREKPI Trigger: TATTGGCTTCTCGCGACTGAAGTGGGCAGGTGTTCAGGTGAACAGAATATAGAGAACATCACTTTTCACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114765.4 |
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