Pregenerated sensors for TMEM181A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038141Ensembl transcript IDs: ENSMUST00000088940.6, ENSMUST00000232383.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGTCTCACAGCAGATGCCTGAGTGAGCATACTGACCCCATCATGTaGTGGAGAAGAGGGAGGCAGACCGCCCACCTGAGGCGGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: KSHSRCLSEHTDPIM*WRRGRQTAHLRRAQ Trigger: CTGTGCCCGCCTCAGGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTCAGTATGCTCACTCAGGCATCTGCTGTGAGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CCA 90 bp | CATGACACAGGACCTTGCCCACAGCGCTACTGGCCTGTAGCTGCCTaGGCTTCCTCCAGGCTATCAGCCCACTCTGGACTCAACTTGGAT | + |
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Preference number: 1 (lower is better) Translates to: HDTGPCPQRYWPVAA*ASSRLSAHSGLNLD Trigger: ATCCAAGTTGAGTCCAGAGTGGGCTGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGCCAGTAGCGCTGTGGGCAAGGTCCTGTGTCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CCA 90 bp | ACCCTTGAAAAGCACCATGACACAGGACCTTGCCCACAGCGCTACTaGCCTGTAGCTGCCTGGGCTTCCTCCAGGCTATCAGCCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: TLEKHHDTGPCPQRY*PVAAWASSRLSAHS Trigger: AGAGTGGGCTGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGCCAGTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR TCA 90 bp | ATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGGGGAAACTaGGGAGCGGGAAGGAAGGCGGTGGCCCTGAGGACTTCCAATGCT | + |
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Preference number: 1 (lower is better) Translates to: MLPLPGVRRDAVWGN*GAGRKAVALRTSNA Trigger: AGCATTGGAAGTCCTCAGGGCCACCGCCTTCCTTCCCGCTCCTCAGTTTCCCCACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR GCA 90 bp | CCTAACTGTACACAGACCCTTGAAAAGCACCATGACACAGGACCTTaGCCACAGCGCTACTGGCCTGTAGCTGCCTGGGCTTCCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PNCTQTLEKHHDTGP*PQRYWPVAAWASSR Trigger: CCTGGAGGAAGCCCAGGCAGCTACAGGCCAGTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACAGTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR TCA 90 bp | ACGCTGTGTGGGGAAACTGAGGAGCGGGAAGGAAGGCGGTGGCCCTaGGGACTTCCAATGCTGAACTTCAGTGTGGGTGACATCCGTTTT | + |
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Preference number: 1 (lower is better) Translates to: TLCGETEEREGRRWP*GLPMLNFSVGDIRF Trigger: AAAACGGATGTCACCCACACTGAAGTTCAGCATTGGAAGTCCTCAGGGCCACCGCCTTCCTTCCCGCTCCTCAGTTTCCCCACACAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR GCA 90 bp | ACCGGAACTGGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATaGTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGGGGAAACT | + |
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Preference number: 1 (lower is better) Translates to: TGTGPLDLPRQRQAG*YLYQVFAETLCGET Trigger: AGTTTCCCCACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CCA 90 bp | AGTCGGTGCACAGACGAAGGGAACAGAAGAGGGATCTACCGGAACTaGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATGCTACCT | + |
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Preference number: 1 (lower is better) Translates to: SRCTDEGNRRGIYRN*ASGFAKTEAGRMLP Trigger: AGGTAGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATCCCTCTTCTGTTCCCTTCGTCTGTGCACCGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR GCA 90 bp | CGAAGGGAACAGAAGAGGGATCTACCGGAACTGGGCCTCTGGATTTaGCAAGACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCG | + |
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Preference number: 1 (lower is better) Translates to: RREQKRDLPELGLWI*QDRGRQDATFTRCS Trigger: CGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATCCCTCTTCTGTTCCCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CCA 90 bp | CACAGACGAAGGGAACAGAAGAGGGATCTACCGGAACTGGGCCTCTaGATTTGCCAAGACAGAGGCAGGCAGGATGCTACCTTTACCAGG | + |
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Preference number: 1 (lower is better) Translates to: HRRREQKRDLPELGL*ICQDRGRQDATFTR Trigger: CCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATCCCTCTTCTGTTCCCTTCGTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CCA 90 bp | TCAGTACGAGTCAGCGTCCATAAGATGGCAGCTGCAGGGCTCCACTaGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: SVRVSVHKMAAAGLH*KGRAGNIRYSGIFP Trigger: GGGGAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGCAGCTGCCATCTTATGGACGCTGACTCGTACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR GCA 90 bp | CCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTaGTTTATAAACTGCCCATCTGCAGGATGGCTTTACATACCTAAG | + |
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Preference number: 1 (lower is better) Translates to: PNCAFNGSALEAGEI*FINCPSAGWLYIPK Trigger: CTTAGGTATGTAAAGCCATCCTGCAGATGGGCAGTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR GCA 90 bp | TTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACTaGCCATCTGCAGGATGGCTTTACATACCTAAGCTTACTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: FNGSALEAGEICFIN*PSAGWLYIPKLTSV Trigger: GACTGAAGTAAGCTTAGGTATGTAAAGCCATCCTGCAGATGGGCAGTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CCA 90 bp | ACGCTCAAATATACAATACATATCAAGCCTCATATCTGTTCCTCATaGAGGGACTTAGTTCTCTCTTTTGTGGGTGCTTGTGTTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: TLKYTIHIKPHICSS*RDLVLSFVGACVFP Trigger: AGGAAAAACACAAGCACCCACAAAAGAGAGAACTAAGTCCCTCCATGAGGAACAGATATGAGGCTTGATATGTATTGTATATTTGAGCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTACCGGAACTGGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATGCTAGGCCTCTGGCCCCCTaGTGTCCCATCTGCTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: DLPELGLWICQDRGRQDARPLAP*CPICCP Trigger: CGGGCAGCAGATGGGACAGCAGGGGGCCAGAGGCCT...AGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCTGAGGCGGGCACTTAAAGAGTGGGGCTaGCCCCAAAGCAAACTCCGC | + |
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Preference number: 2 (lower is better) Translates to: DPIMCWRRGRQTAHLRRALKEWG*PQSKLR Trigger: GCGGAGTTTGCTTTGGGGGCAGCCCCACTCTTTAAG...TGCCCGCCTCAGGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGACTCAGGCAGGCCTCTaGCCCCCTGCTGTCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: DRGRQDATFTRCSQRRCVTQAGL*PPAVPS Trigger: AGATGGGACAGCAGGGGGCCAGAGGCCTGCCTGAGT...CACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTACCGGAACTGGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATGCTTCATCACTGCCACGCTaGGACCTTGATCGTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: DLPELGLWICQDRGRQDASSLPR*DLDRQA Trigger: GGCCTGACGATCAAGGTCCCAGCGTGGCAGTGATGA...AGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTACCGGAACTGGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATGCTTGGCCTGTAGCTGCCTaGGCTTCCTCCAGGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: DLPELGLWICQDRGRQDAWPVAA*ASSRLS Trigger: TGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGCCA...AGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CAA 90 bp | CCACCTCCAGCACAGGGAGACCCAATCCTAACTGTACACAGACCCTaGAAAAGCACCATGACACAGGACCTTGCCCACAGCGCTACTGGC | + |
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Preference number: 2 (lower is better) Translates to: PPPAQGDPILTVHRP*KSTMTQDLAHSATG Trigger: GCCAGTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACAGTTAGGATTGGGTCTCCCTGTGCTGGAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACCGGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATTGGACTCAACTTGGATaGCAATTCTGCTGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LTGNLGAVTFQVPLDWTNWTQLG*QFCWGW Trigger: CCACCCCCAGCAGAATTGCCATCCAAGTTGAGTCCA...ATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCCGGTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | AATTTTGGTCGGAAGGGCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAATGGCCTGTAGCTGCCTaGGCTTCCTCCAGGCTATCA | + |
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Preference number: 2 (lower is better) Translates to: NFGRKGLLVFHLQHRETQWPVAA*ASSRLS Trigger: TGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGCCA...TTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGCCCTTCCGACCAAAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR GCA 90 bp | AACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACAGGCCTCTGGCCCCCTaGTGTCCCATCTGCTGCCCG | + |
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Preference number: 2 (lower is better) Translates to: NCAFNGSALEAGEICFINRPLAP*CPICCP Trigger: CGGGCAGCAGATGGGACAGCAGGGGGCCAGAGGCCT...GTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTCACACTCAGTGAAGATGAAGAAATTTTGGTCGGAAGGGCCTCCTCGTGACCCCATCATGTGCTaGAGAAGAGGGAGGCAGACC | + |
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Preference number: 2 (lower is better) Translates to: GGSHSVKMKKFWSEGPPRDPIMC*RRGRQT Trigger: GGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTC...ACGAGGAGGCCCTTCCGACCAAAATTTCTTCATCTTCACTGAGTGTGAACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATAAAAACTGACCCCATCATGTaGTGGAGAAGAGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GNLGAVTFQVPLDWTNIKTDPIM*WRRGRQ Trigger: CTGCCTCCCTCTTCTCCAGCACATGATGGGGTCAGT...TTTTATATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATAAAACCCCAACAGACTCAGTaGTCACAGCAAGTGCAAACT | + |
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Preference number: 2 (lower is better) Translates to: GNLGAVTFQVPLDWTNIKPQQTQ*SQQVQT Trigger: AGTTTGCACTTGCTGTGATCACTGAGTCTGTTGGGG...TTTTATATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATAAAAACTCTGGACTCAACTTaGATGGCAATTCTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GNLGAVTFQVPLDWTNIKTLDST*MAILLG Trigger: CCCCAGCAGAATTGCCATCCAAGTTGAGTCCAGAGT...TTTTATATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATAAAATACAGGATATGCCTTTaGATTCTCTACCAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GNLGAVTFQVPLDWTNIKYRICL*ILYQAA Trigger: GGCTGCCTGGTAGAGAATTCAAAGGCATATCCTGTA...TTTTATATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGGAACAGGAAACCTTTGCTTACAGAGGAGTCCAGACACAAACAGATAGAAACTCAGGCAGGCCTCTaGCCCCCTGCTGTCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: IRNRKPLLTEESRHKQIETQAGL*PPAVPS Trigger: AGATGGGACAGCAGGGGGCCAGAGGCCTGCCTGAGT...TTCTATCTGTTTGTGTCTGGACTCCTCTGTAAGCAAAGGTTTCCTGTTCCTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGCTCCACTGGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCACTCTGGACTCAACTTaGATGGCAATTCTGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: AGLHWKGRAGNIRYSGIFTLDST*MAILLG Trigger: CCCCAGCAGAATTGCCATCCAAGTTGAGTCCAGAGT...GAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGCTCCACTGGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCTACAGGATATGCCTTTaGATTCTCTACCAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: AGLHWKGRAGNIRYSGIFYRICL*ILYQAA Trigger: GGCTGCCTGGTAGAGAATTCAAAGGCATATCCTGTA...GAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCCCTTCATCTGCAGCTGTCTCTATAGCCATTCAAAATGTCTTACTTTCTCTCTACTGGCCTGTAGCTaGCTGGGCTTCCTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TPFICSCLYSHSKCLTFSLLACS*LGFLQA Trigger: AGCCTGGAGGAAGCCCAGGCAGCTACAGGCCAGTAG...AGAGAAAGTAAGACATTTTGAATGGCTATAGAGACAGCTGCAGATGAAGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CAA 90 bp | AATGATGGACGGGAACCTGGCCACTTGCCATTCCTGAAGATGCTATaGAATGTGGCTCATCAAACCCAATCAAAGTCTCACAGCAGATGC | + |
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Preference number: 2 (lower is better) Translates to: NDGREPGHLPFLKML*NVAHQTQSKSHSRC Trigger: GCATCTGCTGTGAGACTTTGATTGGGTTTGATGAGCCACATTCAATAGCATCTTCAGGAATGGCAAGTGGCCAGGTTCCCGTCCATCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATATTTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGCTTAAAGAGTGGGGCTaGCCCCAAAGCAAACTCCGC | + |
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Preference number: 2 (lower is better) Translates to: TIFEPVHPNCAFNGSALELKEWG*PQSKLR Trigger: GCGGAGTTTGCTTTGGGGGCAGCCCCACTCTTTAAG...CTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAAATATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAACGCTCAAATATACAATACATATCAAGCCTCATATCTGTTCCTCATGGGCTGCAGGGCTCCACTaGAAGGGAAGGGCTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: RQTLKYTIHIKPHICSSWAAGLH*KGRAGN Trigger: GTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGCAGC...CCATGAGGAACAGATATGAGGCTTGATATGTATTGTATATTTGAGCGTTTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGTGCCCATCTGCAGGATaGCTTTACATACCTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: LNLFILTVPSMVQHLRLACPSAG*LYIPKL Trigger: AAGCTTAGGTATGTAAAGCCATCCTGCAGATGGGCA...CGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR GCA 90 bp | AACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACGGGACTCCCTTCATCTaGAGCTGTCTCTATAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: NCAFNGSALEAGEICFINGTPFI*SCLYSH Trigger: ATGGCTATAGAGACAGCTGCAGATGAAGGGAGTCCC...GTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAACGCTCAAATATACAATACATATCAAGCCTCATATCTGTTCCTCATGGTCATCACTGCCACGCTaGGACCTTGATCGTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RQTLKYTIHIKPHICSSWSSLPR*DLDRQA Trigger: GGCCTGACGATCAAGGTCCCAGCGTGGCAGTGATGA...CCATGAGGAACAGATATGAGGCTTGATATGTATTGTATATTTGAGCGTTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGATGTAAGTTTACATACCCTCTTCTCTAGCCTTTCGATGGGGCTTGAAGGCCATATTCGAACATCTTaGGATCAGTACGAGTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: SDVSLHTLFSSLSMGLEGHIRTS*DQYESA Trigger: CGCTGACTCGTACTGATCCCAAGATGTTCGAATATG...GCCTTCAAGCCCCATCGAAAGGCTAGAGAAGAGGGTATGTAAACTTACATCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAACGCTCAAATATACAATACATATCAAGCCTCATATCTGTTCCTCATGGTGGACTCAACTTGGATaGCAATTCTGCTGGGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RQTLKYTIHIKPHICSSWWTQLG*QFCWGW Trigger: CCACCCCCAGCAGAATTGCCATCCAAGTTGAGTCCA...CCATGAGGAACAGATATGAGGCTTGATATGTATTGTATATTTGAGCGTTTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CCA 90 bp | AACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACTGCCCATCTGCAGGATaGCTTTACATACCTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: NCAFNGSALEAGEICFINCPSAG*LYIPKL Trigger: AAGCTTAGGTATGTAAAGCCATCCTGCAGATGGGCA...GTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR CCA 72 bp | GGACCTTGCCCACAGCGCTACTGGCCTGTAGCTGCCTaGGCTTCCTCCAGGCTATCAGCCCACTCTGGACTC | + |
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Preference number: 3 (lower is better) Translates to: GPCPQRYWPVAA*ASSRLSAHSGL Trigger: GAGTCCAGAGTGGGCTGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGCCAGTAGCGCTGTGGGCAAGGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR-3UTR CAA 90 bp | GACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCTGAGGCGGGCACAGCTTAGACTTCCCTaGAGGGTAGGGCACTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: DPIMCWRRGRQTAHLRRAQLRLP*RVGHSR Trigger: TCTTGAGTGCCCTACCCTCAAGGGAAGTCTAAGCTG...TGCCCGCCTCAGGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR TCA 72 bp | TTACCAGGTGTTCGCAGAGACGCTGTGTGGGGAAACTaGGGAGCGGGAAGGAAGGCGGTGGCCCTGAGGACT | + |
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Preference number: 3 (lower is better) Translates to: LPGVRRDAVWGN*GAGRKAVALRT Trigger: AGTCCTCAGGGCCACCGCCTTCCTTCCCGCTCCTCAGTTTCCCCACACAGCGTCTCTGCGAACACCTGGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| 3UTR TCA 72 bp | GGGGAAACTGAGGAGCGGGAAGGAAGGCGGTGGCCCTaGGGACTTCCAATGCTGAACTTCAGTGTGGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GETEEREGRRWP*GLPMLNFSVGD Trigger: GTCACCCACACTGAAGTTCAGCATTGGAAGTCCTCAGGGCCACCGCCTTCCTTCCCGCTCCTCAGTTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR GCA 72 bp | AGCAGATGCCTGAGTGAGCATACTGACCCCATCATGTaGTGGAGAAGAGGGAGGCAGACCGCCCACCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SRCLSEHTDPIM*WRRGRQTAHLR Trigger: CCTCAGGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTCAGTATGCTCACTCAGGCATCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CCA 72 bp | AGCTGCCTGGGCTTCCTCCAGGCTATCAGCCCACTCTaGACTCAACTTGGATGGCAATTCTGCTGGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCLGFLQAISPL*TQLGWQFCWGW Trigger: CCACCCCCAGCAGAATTGCCATCCAAGTTGAGTCCAGAGTGGGCTGATAGCCTGGAGGAAGCCCAGGCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CCA 72 bp | AAGCACCATGACACAGGACCTTGCCCACAGCGCTACTaGCCTGTAGCTGCCTGGGCTTCCTCCAGGCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: KHHDTGPCPQRY*PVAAWASSRLS Trigger: TGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGCCAGTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCTGAGGCGGGCAAGGAACAGGAAACCTTaGCTTACAGAGGAGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DPIMCWRRGRQTAHLRRARNRKP*LTEESR Trigger: TCTGGACTCCTCTGTAAGCAAAGGTTTCCTGTTCCT...TGCCCGCCTCAGGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR GCA 72 bp | TCAAGAACGGTGCCACAGAGAGGAGAGAGTCATCACTaGCACGCTGGGACCTTGATCGTCAGGCCTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SRTVPQRGESHH*HAGTLIVRPPT Trigger: TGTGGGAGGCCTGACGATCAAGGTCCCAGCGTGGCAGTGATGACTCTCTCCTCTCTGTGGCACCGTTCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR GCA 72 bp | ACACAGACCCTTGAAAAGCACCATGACACAGGACCTTaGCCACAGCGCTACTGGCCTGTAGCTGCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TQTLEKHHDTGP*PQRYWPVAAWA Trigger: AGCCCAGGCAGCTACAGGCCAGTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CCA 72 bp | GGTGCCACAGAGAGGAGAGAGTCATCACTGCCACGCTaGGACCTTGATCGTCAGGCCTCCCACAGACTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GATERRESSLPR*DLDRQASHRLN Trigger: ATTGAGTCTGTGGGAGGCCTGACGATCAAGGTCCCAGCGTGGCAGTGATGACTCTCTCCTCTCTGTGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CCA 72 bp | AGGGAACAGAAGAGGGATCTACCGGAACTGGGCCTCTaGATTTGCCAAGACAGAGGCAGGCAGGATGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: REQKRDLPELGL*ICQDRGRQDAT Trigger: GGTAGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATCCCTCTTCTGTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CCA 72 bp | ACAGACGAAGGGAACAGAAGAGGGATCTACCGGAACTaGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TDEGNRRGIYRN*ASGFAKTEAGR Trigger: CCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATCCCTCTTCTGTTCCCTTCGTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CCA 72 bp | ACATCTTGGGATCAGTACGAGTCAGCGTCCATAAGATaGCAGCTGCAGGGCTCCACTGGAAGGGAAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TSWDQYESASIR*QLQGSTGREGL Trigger: CAGCCCTTCCCTTCCAGTGGAGCCCTGCAGCTGCCATCTTATGGACGCTGACTCGTACTGATCCCAAGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR TCA 72 bp | GGGAAGGAAGGCGGTGGCCCTGAGGACTTCCAATGCTaGACTTCAGTGTGGGTGACATCCGTTTTCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKEGGGPEDFQC*TSVWVTSVFHR Trigger: TCTGTGGAAAACGGATGTCACCCACACTGAAGTTCAGCATTGGAAGTCCTCAGGGCCACCGCCTTCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTACACAGACCCTTGAAAAGCACCATGACACAGGACCTTGCCCACAGCGCTACCGGGAACCTGGCCACTaGCCATTCCTGAAGATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: CTQTLEKHHDTGPCPQRYREPGH*PFLKML Trigger: TAGCATCTTCAGGAATGGCAAGTGGCCAGGTTCCCG...GTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCACCGGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATACTGTACACAGACCCTaGAAAAGCACCATGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LTGNLGAVTFQVPLDWTNTVHRP*KSTMTQ Trigger: CTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACAGT...ATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCCGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCTCAGAGCGGAAATCTGAGTCGGTGCACAGACGAAGGGAACAGAAGAGGGGAAGATGAAGAAATTTaGGTCGGAAGGGCCTCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: AAQSGNLSRCTDEGNRRGEDEEI*VGRASS Trigger: CGAGGAGGCCCTTCCGACCAAAATTTCTTCATCTTC...CCCTCTTCTGTTCCCTTCGTCTGTGCACCGACTCAGATTTCCGCTCTGAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR TCA 72 bp | AGAGAGGAGAGAGTCATCACTGCCACGCTGGGACCTTaGTCGTCAGGCCTCCCACAGACTCAATTGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: REERVITATLGP*SSGLPQTQLLF Trigger: AAAAAGCAATTGAGTCTGTGGGAGGCCTGACGATCAAGGTCCCAGCGTGGCAGTGATGACTCTCTCCTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGCTCCACTGGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCCAGCTTAGACTTCCCTaGAGGGTAGGGCACTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AGLHWKGRAGNIRYSGIFQLRLP*RVGHSR Trigger: TCTTGAGTGCCCTACCCTCAAGGGAAGTCTAAGCTG...GAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR GCA 72 bp | GTGGCTCATCAAACCCAATCAAAGTCTCACAGCAGATaGCTGAGTGAGCATACTGACCCCATCATGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VAHQTQSKSHSR*LSEHTDPIMCW Trigger: CCAGCACATGATGGGGTCAGTATGCTCACTCAGGCATCTGCTGTGAGACTTTGATTGGGTTTGATGAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR TCA 72 bp | CCATCGCACCTGATGTCGGTGTACAGGATATGCCTTTaGATTCTCTACCAGGCAGCCCCTCTTCTTAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSHLMSVYRICL*ILYQAAPLLKE Trigger: CTCTTTAAGAAGAGGGGCTGCCTGGTAGAGAATTCAAAGGCATATCCTGTACACCGACATCAGGTGCGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGACTGTACACAGACCCTaGAAAAGCACCATGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LNLFILTVPSMVQHLRLATVHRP*KSTMTQ Trigger: CTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACAGT...CGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR TCA 72 bp | CTCATCAAACCCAATCAAAGTCTCACAGCAGATGCCTaGGTGAGCATACTGACCCCATCATGTGCTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LIKPNQSLTADA*VSILTPSCAGE Trigger: TTCTCCAGCACATGATGGGGTCAGTATGCTCACTCAGGCATCTGCTGTGAGACTTTGATTGGGTTTGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR TCA 72 bp | TGTTTTAAGCTCACCCCTGAGCTGCTGCCTACACACTaGAGTCTTAGTTCTGTAAGCAGAGCTTTGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CFKLTPELLPTH*SLSSVSRALHS Trigger: GCTGTGCAAAGCTCTGCTTACAGAACTAAGACTTCAGTGTGTAGGCAGCAGCTCAGGGGTGAGCTTAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR GCA 72 bp | GCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTaGTTTATAAACTGCCCATCTGCAGGATGGCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: AFNGSALEAGEI*FINCPSAGWLY Trigger: GTAAAGCCATCCTGCAGATGGGCAGTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGTTCACACTCAGTGAAGATGAAGAAATTTTGGTCGGAAGGGCCTCCTCGTTTCCTGAAGATGCTATaGAATGTGGCTCATCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: GGSHSVKMKKFWSEGPPRFLKML*NVAHQT Trigger: GGTTTGATGAGCCACATTCAATAGCATCTTCAGGAA...ACGAGGAGGCCCTTCCGACCAAAATTTCTTCATCTTCACTGAGTGTGAACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR GCA 72 bp | TCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACTaGCCATCTGCAGGATGGCTTTACATACCTAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SALEAGEICFIN*PSAGWLYIPKL Trigger: AAGCTTAGGTATGTAAAGCCATCCTGCAGATGGGCAGTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATTTGCTTTATAAACTGCCCATCTGCAGGATGGCTTTACATACCTAAGCTTAGGAACAGGAAACCTTaGCTTACAGAGGAGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EICFINCPSAGWLYIPKLRNRKP*LTEESR Trigger: TCTGGACTCCTCTGTAAGCAAAGGTTTCCTGTTCCT...AAGCTTAGGTATGTAAAGCCATCCTGCAGATGGGCAGTTTATAAAGCAAATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR TCA 72 bp | CATAAGATATTCTGGTATCTTCCCCAACAGACTCAGTaGTCACAGCAAGTGCAAACTCATGTAAACCCGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HKIFWYLPQQTQ*SQQVQTHVNPL Trigger: TAACGGGTTTACATGAGTTTGCACTTGCTGTGATCACTGAGTCTGTTGGGGAAGATACCAGAATATCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | GACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGTCGCGGTACGCCTCCTaGAGCCGCCGGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DRGRQDATFTRCSQRRCVSRYAS*SRRHSC Trigger: GCAGCTGTGCCGGCGGCTGCAGGAGGCGTACCGCGA...CACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCTGAGGCGGGCAGATGGATGTTTCTTCTaGGGGCTCCAGCTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DPIMCWRRGRQTAHLRRADGCFF*GLQLHN Trigger: GTTGTGGAGCTGGAGCCCTCAGAAGAAACATCCATC...TGCCCGCCTCAGGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CAA 72 bp | ACCGCCCACCTGAGGCGGGCACAGCTTAGACTTCCCTaGAGGGTAGGGCACTCAAGAACGGTGCCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAHLRRAQLRLP*RVGHSRTVPQR Trigger: TCTCTGTGGCACCGTTCTTGAGTGCCCTACCCTCAAGGGAAGTCTAAGCTGTGCCCGCCTCAGGTGGGCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | TGTACACAGACCCTTGAAAAGCACCATGACACAGGACCTTGCCCACAGCGCTACGCGCGAGGTCCTCCTTaGGCTCGCGGTACGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTQTLEKHHDTGPCPQRYARGPP*ARGTPP Trigger: AGGAGGCGTACCGCGAGCTCAAGGAGGACCTCGCGC...GTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | GACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCTGAGGCGGGCAGGCCACGATGATTTCTaGACATTTCCCTGCACACGT | + |
|
Preference number: 4 (lower is better) Translates to: DPIMCWRRGRQTAHLRRAGHDDF*TFPCTR Trigger: ACGTGTGCAGGGAAATGTGCAGAAATCATCGTGGCC...TGCCCGCCTCAGGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | CTCACCGGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATCAGCGGCCACCACCATaGAGAAGACCTTCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGNLGAVTFQVPLDWTNQRPPP*RRPSCP Trigger: AGGGCATGAAGGTCTTCTTCATGGTGGTGGCCGCTG...ATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCCGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGGCTCCACTGGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCGCCGGCACAGCTGCTTaGGGCCACTGCAGAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGLHWKGRAGNIRYSGIFAGTAA*GHCRAA Trigger: CGCCGCTCTGCAGTGGCCTCAAGCAGCTGTGCCGGC...GAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTTGCACTTGGCACGGATaGCCTGGCCGTTCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQRQAGCYLYQVFAETLCCTWHG*PGRSAG Trigger: CCCTGCAGAACGGCCAGGCCATCCGTGCCAAGTGCA...ACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGCATACTGACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCGTCGTGGTTCCATCTTaGGACACACCATCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSILTPSCAGEEGGRPPTVVVPS*DTPSTF Trigger: GAAGGTCGATGGTGTGTCTCAAGATGGAACCACGAC...GGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTCAGTATGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | CTCACCGGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATTGGACCCGTATCCCATaGTACACGCACAGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGNLGAVTFQVPLDWTNWTRIP*YTHSQK Trigger: CTTCTGGCTGTGCGTGTATCATGGGATACGGGTCCA...ATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCCGGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTAGCTGCCTGGGCTTCCTCCAGGCTATCAGCCCACTCTGGACTCAACTTTCCACTTCTGCTCGATaGCCCAGTCCCTCATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACSCLGFLQAISPLWTQLSTSAR*PSPSWR Trigger: TCTCCATGAGGGACTGGGGCATCGAGCAGAAGTGGA...AAGTTGAGTCCAGAGTGGGCTGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GATCTACCGGAACTGGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATGCTGCCATATTCCCAGAGTaGCAGAAGCCAGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLPELGLWICQDRGRQDAAIFPE*QKPATA Trigger: TGCTGTGGCTGGCTTCTGTCACTCTGGGAATATGGC...AGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGCATACTGACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCCACAGGAACAGAGACTaGAAGAAGTCGTCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VSILTPSCAGEEGGRPPTHRNRD*KKSSSI Trigger: GATGCTGGACGACTTCTTCCAGTCTCTGTTCCTGTG...GGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTCAGTATGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GATCTACCGGAACTGGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATGCTGCGATCATCCTTGAATaGCGCGAGGTCCTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPELGLWICQDRGRQDAAIILE*REVLLE Trigger: CTCAAGGAGGACCTCGCGCCATTCAAGGATGATCGC...AGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGGTCGTGGTTCCATCTTaGGACACACCATCGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRGRQDATFTRCSQRRCVVVVPS*DTPSTF Trigger: GAAGGTCGATGGTGTGTCTCAAGATGGAACCACGAC...CACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | AATTTTGGTCGGAAGGGCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAATGGACCCGTATCCCATaGTACACGCACAGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NFGRKGLLVFHLQHRETQWTRIP*YTHSQK Trigger: CTTCTGGCTGTGCGTGTATCATGGGATACGGGTCCA...TTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGCCCTTCCGACCAAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTAGCTGCCTGGGCTTCCTCCAGGCTATCAGCCCACTCTGGACTCAACTTATATCCTTGATGGGCTaGTTCAGGTGCTCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACSCLGFLQAISPLWTQLISLMG*FRCSNP Trigger: GGGGTTTGAGCACCTGAACCAGCCCATCAAGGATAT...AAGTTGAGTCCAGAGTGGGCTGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | CTCACCGGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATATCCTTGATGGGCTaGTTCAGGTGCTCAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGNLGAVTFQVPLDWTNISLMG*FRCSNP Trigger: GGGGTTTGAGCACCTGAACCAGCCCATCAAGGATAT...ATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCCGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTAGCTGCCTGGGCTTCCTCCAGGCTATCAGCCCACTCTGGACTCAACTTCACAGGAACAGAGACTaGAAGAAGTCGTCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ACSCLGFLQAISPLWTQLHRNRD*KKSSSI Trigger: GATGCTGGACGACTTCTTCCAGTCTCTGTTCCTGTG...AAGTTGAGTCCAGAGTGGGCTGATAGCCTGGAGGAAGCCCAGGCAGCTACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATAAAATTGGCACGGATGGCCTaGCCGTTCTGCAGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GNLGAVTFQVPLDWTNIKLARMA*PFCRGI Trigger: AATGCCCCTGCAGAACGGCCAGGCCATCCGTGCCAA...TTTTATATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCCAGACACAAACAGATAGAAGGGGCCAGAATGTGTCACTCAGGCAGGCCTGCCATATTCCCAGAGTaGCAGAAGCCAGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESRHKQIEGARMCHSGRPAIFPE*QKPATA Trigger: TGCTGTGGCTGGCTTCTGTCACTCTGGGAATATGGC...AGGCCTGCCTGAGTGACACATTCTGGCCCCTTCTATCTGTTTGTGTCTGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGAAGACCTTCATGCCCTaGAAGTTTCCGGTGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: DRGRQDATFTRCSQRRCVKTFMP*KFPVST Trigger: GGTTGACACCGGAAACTTTCAGGGCATGAAGGTCTT...CACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAATCCTAACTGTACACAGATGGGCTGGTTCAGGTaGTCAAACCCCACAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: ASSFSTSSTGRPNPNCTQMGWFR*SNPTVT Trigger: GGTTACTGTGGGGTTTGAGCACCTGAACCAGCCCAT...CTGTGTACAGTTAGGATTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | TGTACACAGACCCTTGAAAAGCACCATGACACAGGACCTTGCCCACAGCGCTACACAGACATCCACTTCTaGTCGATGCCCCAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTQTLEKHHDTGPCPQRYTDIHF*SMPQSL Trigger: GAGGGACTGGGGCATCGAGCAGAAGTGGATGTCTGT...GTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | CTCACCGGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATGCTACGAAGTTGTCCTaGAACACTTGTGCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGNLGAVTFQVPLDWTNATKLS*NTCAPN Trigger: GTTTGGAGCACAAGTGTTGCAGGACAACTTCGTAGC...ATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCCGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | TTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGACTCTTCCCTGCACTTaGCACGGATGGCCTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNLFILTVPSMVQHLRLATLPCT*HGWPGR Trigger: ACGGCCAGGCCATCCGTGCCAAGTGCAGGGAAGAGT...CGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CAA 72 bp | CAGAGAGGAGAGAGTCATCACTGCCACGCTGGGACCTaGATCGTCAGGCCTCCCACAGACTCAATTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRGESHHCHAGT*IVRPPTDSIAF Trigger: AAAAGCAATTGAGTCTGTGGGAGGCCTGACGATCAAGGTCCCAGCGTGGCAGTGATGACTCTCTCCTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CAA 72 bp | GCACAGGGAGACCCAATCCTAACTGTACACAGACCCTaGAAAAGCACCATGACACAGGACCTTGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQGDPILTVHRP*KSTMTQDLAHS Trigger: GCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACAGTTAGGATTGGGTCTCCCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAATCCTAACTGTACACAGAAGACCTTCATGCCCTaGAAGTTTCCGGTGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: ASSFSTSSTGRPNPNCTQKTFMP*KFPVST Trigger: GGTTGACACCGGAAACTTTCAGGGCATGAAGGTCTT...CTGTGTACAGTTAGGATTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | TCGGATGTAAGTTTACATACCCTCTTCTCTAGCCTTTCGATGGGGCTTGAAGGCACTCTTCCCTGCACTTaGCACGGATGGCCTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SDVSLHTLFSSLSMGLEGTLPCT*HGWPGR Trigger: ACGGCCAGGCCATCCGTGCCAAGTGCAGGGAAGAGT...GCCTTCAAGCCCCATCGAAAGGCTAGAGAAGAGGGTATGTAAACTTACATCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATAAAACAAGGTGGGCCACGATaGTTTCTGCACATTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GNLGAVTFQVPLDWTNIKQGGPR*FLHISL Trigger: CAGGGAAATGTGCAGAAATCATCGTGGCCCACCTTG...TTTTATATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGTTCACACTCAGTGAAGATGAAGAAATTTTGGTCGGAAGGGCCTCCTCGTCAAGGTGGGCCACGATaGTTTCTGCACATTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGSHSVKMKKFWSEGPPRQGGPR*FLHISL Trigger: CAGGGAAATGTGCAGAAATCATCGTGGCCCACCTTG...ACGAGGAGGCCCTTCCGACCAAAATTTCTTCATCTTCACTGAGTGTGAACCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCTCCACTGGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCACAGACATCCACTTCTaGTCGATGCCCCAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLHWKGRAGNIRYSGIFTDIHF*SMPQSL Trigger: GAGGGACTGGGGCATCGAGCAGAAGTGGATGTCTGT...GAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCAGAGCGGAAATCTGAGTCGGTGCACAGACGAAGGGAACAGAAGAGGGTATGGATGTACGTCGTaGTTCCATCTTGAGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: AAQSGNLSRCTDEGNRRGYGCTS*FHLETH Trigger: GTGTGTCTCAAGATGGAACCACGACGTACATCCATA...CCCTCTTCTGTTCCCTTCGTCTGTGCACCGACTCAGATTTCCGCTCTGAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCAGAGCGGAAATCTGAGTCGGTGCACAGACGAAGGGAACAGAAGAGGGCACCAAGAAGGAGAGTaGGAAGAAAGGGTCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AAQSGNLSRCTDEGNRRGHQEGE*EERVIV Trigger: TACAATGACCCTTTCTTCCCACTCTCCTTCTTGGTG...CCCTCTTCTGTTCCCTTCGTCTGTGCACCGACTCAGATTTCCGCTCTGAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | AACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACTGCACTTGGCACGGATaGCCTGGCCGTTCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NCAFNGSALEAGEICFINCTWHG*PGRSAG Trigger: CCCTGCAGAACGGCCAGGCCATCCGTGCCAAGTGCA...GTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GATCTACCGGAACTGGGCCTCTGGATTTGCCAAGACAGAGGCAGGCAGGATGCTATCAGCCATAGTTGTTaGTTATATGTGGACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLPELGLWICQDRGRQDAISHSC*LYVDSG Trigger: CCCACTGTCCACATATAACCAACAACTATGGCTGAT...AGCATCCTGCCTGCCTCTGTCTTGGCAAATCCAGAGGCCCAGTTCCGGTAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGATCAGCCATAGTTGTTaGTTATATGTGGACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DRGRQDATFTRCSQRRCVISHSC*LYVDSG Trigger: CCCACTGTCCACATATAACCAACAACTATGGCTGAT...CACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | CTCACCGGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATTCAGTCCAAAACAGATaGAGAAGACAACAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: LTGNLGAVTFQVPLDWTNSVQNR*RRQQTQ Trigger: TTGTGTTTGTTGTCTTCTTCATCTGTTTTGGACTGA...ATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCCGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | TGTACACAGACCCTTGAAAAGCACCATGACACAGGACCTTGCCCACAGCGCTACCAGAGTCGTTCAACATaGAAAACGCAGGGTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTQTLEKHHDTGPCPQRYQSRST*KTQGYP Trigger: AGGATAACCCTGCGTTTTCCATGTTGAACGACTCTG...GTAGCGCTGTGGGCAAGGTCCTGTGTCATGGTGCTTTTCAAGGGTCTGTGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | GACAGAGGCAGGCAGGATGCTACCTTTACCAGGTGTTCGCAGAGACGCTGTGTGTCAGTCCAAAACAGATaGAGAAGACAACAAACACAA | + |
|
Preference number: 4 (lower is better) Translates to: DRGRQDATFTRCSQRRCVSVQNR*RRQQTQ Trigger: TTGTGTTTGTTGTCTTCTTCATCTGTTTTGGACTGA...CACACAGCGTCTCTGCGAACACCTGGTAAAGGTAGCATCCTGCCTGCCTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | ACCATATTTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGCAGCGGCCACCACCATaGAGAAGACCTTCATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TIFEPVHPNCAFNGSALEQRPPP*RRPSCP Trigger: AGGGCATGAAGGTCTTCTTCATGGTGGTGGCCGCTG...CTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAAATATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAATCCTAACTGTACACAGGTTGTTGGTTATATGTaGACAGTGGGTTTGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASSFSTSSTGRPNPNCTQVVGYM*TVGLKV Trigger: TACCTTCAAACCCACTGTCCACATATAACCAACAAC...CTGTGTACAGTTAGGATTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGTTCACACTCAGTGAAGATGAAGAAATTTTGGTCGGAAGGGCCTCCTCGTCAGAGTCGTTCAACATaGAAAACGCAGGGTTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSHSVKMKKFWSEGPPRQSRST*KTQGYP Trigger: AGGATAACCCTGCGTTTTCCATGTTGAACGACTCTG...ACGAGGAGGCCCTTCCGACCAAAATTTCTTCATCTTCACTGAGTGTGAACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGAACAGGAAACCTTTGCTTACAGAGGAGTCCAGACACAAACAGATAGAATTGGCACGGATGGCCTaGCCGTTCTGCAGGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IRNRKPLLTEESRHKQIELARMA*PFCRGI Trigger: AATGCCCCTGCAGAACGGCCAGGCCATCCGTGCCAA...TTCTATCTGTTTGTGTCTGGACTCCTCTGTAAGCAAAGGTTTCCTGTTCCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| 3UTR CAA 72 bp | CGGGAACCTGGCCACTTGCCATTCCTGAAGATGCTATaGAATGTGGCTCATCAAACCCAATCAAAGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: REPGHLPFLKML*NVAHQTQSKSH Trigger: GTGAGACTTTGATTGGGTTTGATGAGCCACATTCAATAGCATCTTCAGGAATGGCAAGTGGCCAGGTTCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | AACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACATGGGCTGGTTCAGGTaGTCAAACCCCACAGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: NCAFNGSALEAGEICFINMGWFR*SNPTVT Trigger: GGTTACTGTGGGGTTTGAGCACCTGAACCAGCCCAT...GTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGGAACAGGAAACCTTTGCTTACAGAGGAGTCCAGACACAAACAGATAGAAGGACGAAGTGGCGCTTaGAGAGCGTATAGAGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRNRKPLLTEESRHKQIEGRSGA*RAYRAA Trigger: TGCGGCTCTATACGCTCTCCAAGCGCCACTTCGTCC...TTCTATCTGTTTGTGTCTGGACTCCTCTGTAAGCAAAGGTTTCCTGTTCCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCTCCACTGGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCTATGGATGTACGTCGTaGTTCCATCTTGAGACACAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLHWKGRAGNIRYSGIFYGCTS*FHLETH Trigger: GTGTGTCTCAAGATGGAACCACGACGTACATCCATA...GAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCTCCACTGGAAGGGAAGGGCTGGTAACATAAGATATTCTGGTATCTTCCACCAAGAAGGAGAGTaGGAAGAAAGGGTCATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGLHWKGRAGNIRYSGIFHQEGE*EERVIV Trigger: TACAATGACCCTTTCTTCCCACTCTCCTTCTTGGTG...GAAGATACCAGAATATCTTATGTTACCAGCCCTTCCCTTCCAGTGGAGCCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | ACCATATTTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGCGTATAGAGCCGCATaGGTGCCAACCTGTAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TIFEPVHPNCAFNGSALEAYRAA*VPTCSS Trigger: GCTACTACAGGTTGGCACCCATGCGGCTCTATACGC...CTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAAATATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAATCCTAACTGTACACAGAATTCATTAAATGTCTaGCATATTCCCAGAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ASSFSTSSTGRPNPNCTQNSLNV*HIPRVT Trigger: TGTCACTCTGGGAATATGGCAGACATTTAATGAATT...CTGTGTACAGTTAGGATTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGGAACAGGAAACCTTTGCTTACAGAGGAGTCCAGACACAAACAGATAGAAGATGGATGTTTCTTCTaGGGGCTCCAGCTCCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: IRNRKPLLTEESRHKQIEDGCFF*GLQLHN Trigger: GTTGTGGAGCTGGAGCCCTCAGAAGAAACATCCATC...TTCTATCTGTTTGTGTCTGGACTCCTCTGTAAGCAAAGGTTTCCTGTTCCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAAACGCTCAAATATACAATACATATCAAGCCTCATATCTGTTCCTCATGGAGTAGCGATCATCCTTaGATGGCGCGAGGTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQTLKYTIHIKPHICSSWSSDHP*MARGPP Trigger: AGGAGGACCTCGCGCCATTCAAGGATGATCGCTACT...CCATGAGGAACAGATATGAGGCTTGATATGTATTGTATATTTGAGCGTTTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCCTTCATCTGCAGCTGTCTCTATAGCCATTCAAAATGTCTTACTTTCTCTCCTTCACTGTCATGGTaGAGCTGGTTTGGATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TPFICSCLYSHSKCLTFSPSLSW*SWFGWM Trigger: CATCCATCCAAACCAGCTTCACCATGACAGTGAAGG...AGAGAAAGTAAGACATTTTGAATGGCTATAGAGACAGCTGCAGATGAAGGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | GAGATTTGCTTTATAAACTGCCCATCTGCAGGATGGCTTTACATACCTAAGCTTGGCCACGATGATTTCTaGACATTTCCCTGCACACGT | + |
|
Preference number: 4 (lower is better) Translates to: EICFINCPSAGWLYIPKLGHDDF*TFPCTR Trigger: ACGTGTGCAGGGAAATGTGCAGAAATCATCGTGGCC...AAGCTTAGGTATGTAAAGCCATCCTGCAGATGGGCAGTTTATAAAGCAAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | ACCATATTTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGCTACGAAGTTGTCCTaGAACACTTGTGCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TIFEPVHPNCAFNGSALEATKLS*NTCAPN Trigger: GTTTGGAGCACAAGTGTTGCAGGACAACTTCGTAGC...CTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAAATATGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR GCA 90 bp | AACTGTGCCTTCAATGGTTCAGCACTTGAGGCTGGCGAGATTTGCTTTATAAACAATTCATTAAATGTCTaGCATATTCCCAGAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NCAFNGSALEAGEICFINNSLNV*HIPRVT Trigger: TGTCACTCTGGGAATATGGCAGACATTTAATGAATT...GTTTATAAAGCAAATCTCGCCAGCCTCAAGTGCTGAACCATTGAAGGCACAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS-3UTR CCA 90 bp | GAGATTTGCTTTATAAACTGCCCATCTGCAGGATGGCTTTACATACCTAAGCTTGTTGTTGGTTATATGTaGACAGTGGGTTTGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EICFINCPSAGWLYIPKLVVGYM*TVGLKV Trigger: TACCTTCAAACCCACTGTCCACATATAACCAACAAC...AAGCTTAGGTATGTAAAGCCATCCTGCAGATGGGCAGTTTATAAAGCAAATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
||
| CDS GCA 90 bp | TCCTCCTTGAGCTCGCGGTACGCCTCCTGCAGCCGCCGGCACAGCTaGTTGAGGCCACTGCAGAGCGGCGGCTCGAACGCAGGGTACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLSSRYASCSRRHS*LRPLQSGGSNAGYS Trigger: GGAGTACCCTGCGTTCGAGCCGCCGCTCTGCAGTGGCCTCAAGCAGCTGTGCCGGCGGCTGCAGGAGGCGTACCGCGAGCTCAAGGAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS GCA 90 bp | TCCTTGAATGGCGCGAGGTCCTCCTTGAGCTCGCGGTACGCCTCCTaGAGCCGCCGGCACAGCTGCTTGAGGCCACTGCAGAGCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLNGARSSLSSRYAS*SRRHSCLRPLQSGG Trigger: GCCGCCGCTCTGCAGTGGCCTCAAGCAGCTGTGCCGGCGGCTGCAGGAGGCGTACCGCGAGCTCAAGGAGGACCTCGCGCCATTCAAGGA 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS CCA 90 bp | ATAGAGCCGCATGGGTGCCAACCTGTAGTAGCGATCATCCTTGAATaGCGCGAGGTCCTCCTTGAGCTCGCGGTACGCCTCCTGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IEPHGCQPVVAIILE*REVLLELAVRLLQP Trigger: CGGCTGCAGGAGGCGTACCGCGAGCTCAAGGAGGACCTCGCGCCATTCAAGGATGATCGCTACTACAGGTTGGCACCCATGCGGCTCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
||
| CDS GCA 90 bp | AGAGCAGCAGCAGGGCCAGGAGGACAGACATCCACTTCTGCTCGATaGCCCAGTCCCTCATGGAGAACTTGCGCAGGGAATGTACAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RAAAGPGGQTSTSAR*PSPSWRTCAGNVQT Trigger: TGTTTGTACATTCCCTGCGCAAGTTCTCCATGAGGGACTGGGGCATCGAGCAGAAGTGGATGTCTGTCCTCCTGGCCCTGCTGCTGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 90 bp | TACACGCACAGCCAGAAGAGCAGCAGGGCACACAGGAACAGAGACTaGAAGAAGTCGTCCAGCATCCCCGGGAACCAGCTATTCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YTHSQKSSRAHRNRD*KKSSSIPGNQLFTK Trigger: CTTGGTGAATAGCTGGTTCCCGGGGATGCTGGACGACTTCTTCCAGTCTCTGTTCCTGTGTGCCCTGCTGCTCTTCTGGCTGTGCGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | GTGAGCATACTGACCCCATCATGTGCTGGAGAAGAGGGAGGCAGACCGCCCACCTCCCTCATGGAGAACTaGCGCAGGGAATGTACAAAC | + |
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Preference number: 5 (lower is better) Translates to: VSILTPSCAGEEGGRPPTSLMEN*RRECTN Trigger: GTTTGTACATTCCCTGCGCAAGTTCTCCATGAGGGA...GGTGGGCGGTCTGCCTCCCTCTTCTCCAGCACATGATGGGGTCAGTATGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS TCA 90 bp | CTCTGGGTCCCTCGATGCCGACGAAGACGGTCAGTCCAAAACAGATaGAGAAGACAACAAACACAAGGACGAAGTGGCGCTTGGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LWVPRCRRRRSVQNR*RRQQTQGRSGAWRA Trigger: CGCTCTCCAAGCGCCACTTCGTCCTTGTGTTTGTTGTCTTCTTCATCTGTTTTGGACTGACCGTCTTCGTCGGCATCGAGGGACCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | AATTTTGGTCGGAAGGGCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAAGTGAAGTTCATATCCTaGATGGGCTGGTTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NFGRKGLLVFHLQHRETQVKFIS*MGWFRC Trigger: GCACCTGAACCAGCCCATCAAGGATATGAACTTCAC...TTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGCCCTTCCGACCAAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 90 bp | TCGTCAGAGTCGTTCAACATGGAAAACGCAGGGTTATCCTTCAGCTaGGACTCGTACAGGGCATTCTTCGACGGAGAGTACACAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSESFNMENAGLSFS*DSYRAFFDGEYTKA Trigger: GGCCTTTGTGTACTCTCCGTCGAAGAATGCCCTGTACGAGTCCCAGCTGAAGGATAACCCTGCGTTTTCCATGTTGAACGACTCTGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | GGGAATCTGGGAGCCGTCACCTTCCAGGTTCCCCTGGATTGGACCAATATAAAACGTCGTGGTTCCATCTaGAGACACACCATCGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNLGAVTFQVPLDWTNIKRRGSI*RHTIDL Trigger: AAGGTCGATGGTGTGTCTCAAGATGGAACCACGACG...TTTTATATTGGTCCAATCCAGGGGAACCTGGAAGGTGACGGCTCCCAGATTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | GCCTCCTCGTTTTCCACCTCCAGCACAGGGAGACCCAATCCTAACTGTACACAGAGTTCTGCTACGAAGTaGTCCTGCAACACTTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: ASSFSTSSTGRPNPNCTQSSATK*SCNTCA Trigger: AGCACAAGTGTTGCAGGACAACTTCGTAGCAGAACT...CTGTGTACAGTTAGGATTGGGTCTCCCTGTGCTGGAGGTGGAAAACGAGGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | ACCATATTTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGACTCTTCCCTGCACTaGGCACGGATGGCCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TIFEPVHPNCAFNGSALEDSSLH*ARMAWP Trigger: CGGCCAGGCCATCCGTGCCAAGTGCAGGGAAGAGTC...CTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAAATATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | AGGCAAACGCTCAAATATACAATACATATCAAGCCTCATATCTGTTCCTCATGGGGCGCGAGGTCCTCCTaGAGCTCGCGGTACGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQTLKYTIHIKPHICSSWGARSS*SSRYAS Trigger: GGAGGCGTACCGCGAGCTCAAGGAGGACCTCGCGCC...CCATGAGGAACAGATATGAGGCTTGATATGTATTGTATATTTGAGCGTTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
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| CDS TCA 90 bp | TCGTGGTTCCATCTTGAGACACACCATCGACCTTCACTGTCATGGTaGAGCTGGTTTGGATGGATGTTTCTTCTGAGGGCTCCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWFHLETHHRPSLSW*SWFGWMFLLRAPAP Trigger: TGGAGCTGGAGCCCTCAGAAGAAACATCCATCCAAACCAGCTTCACCATGACAGTGAAGGTCGATGGTGTGTCTCAAGATGGAACCACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | GGGGGTTCACACTCAGTGAAGATGAAGAAATTTTGGTCGGAAGGGCCTCCTCGTTCCCTCATGGAGAACTaGCGCAGGGAATGTACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GGSHSVKMKKFWSEGPPRSLMEN*RRECTN Trigger: GTTTGTACATTCCCTGCGCAAGTTCTCCATGAGGGA...ACGAGGAGGCCCTTCCGACCAAAATTTCTTCATCTTCACTGAGTGTGAACCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | GAGTCCAGACACAAACAGATAGAAGGGGCCAGAATGTGTCACTCAGGCAGGCCTAGTTCTGCTACGAAGTaGTCCTGCAACACTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESRHKQIEGARMCHSGRPSSATK*SCNTCA Trigger: AGCACAAGTGTTGCAGGACAACTTCGTAGCAGAACT...AGGCCTGCCTGAGTGACACATTCTGGCCCCTTCTATCTGTTTGTGTCTGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 90 bp | ACAAACAGGCAAATCACGATGAAGGTGAGCACCACAAACACGAAGTaGAACCAGATCTCCAGCCGGGAAAACGCAGGGTTGTATGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNRQITMKVSTTNTK*NQISSRENAGLYVF Trigger: GAAGACATACAACCCTGCGTTTTCCCGGCTGGAGATCTGGTTCCACTTCGTGTTTGTGGTGCTCACCTTCATCGTGATTTGCCTGTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | AGGCAAACGCTCAAATATACAATACATATCAAGCCTCATATCTGTTCCTCATGGGACTCTTCCCTGCACTaGGCACGGATGGCCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RQTLKYTIHIKPHICSSWDSSLH*ARMAWP Trigger: CGGCCAGGCCATCCGTGCCAAGTGCAGGGAAGAGTC...CCATGAGGAACAGATATGAGGCTTGATATGTATTGTATATTTGAGCGTTTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 90 bp | TCTTCTGAGGGCTCCAGCTCCACAACGCACATCAGCCATAGTTGTTaGTTATATGTGGACAGTGGGTTTGAAGGTATAACTGTCTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSEGSSSTTHISHSC*LYVDSGFEGITVFS Trigger: GCTAAAGACAGTTATACCTTCAAACCCACTGTCCACATATAACCAACAACTATGGCTGATGTGCGTTGTGGAGCTGGAGCCCTCAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS GCA 90 bp | TCAACCCGATACTGGTACATGGGATCATTTAATTCATTAAATGTCTaGCATATTCCCAGAGTGACAGAAGCCAGCCACAGCAGTCCAACG | + |
|
Preference number: 5 (lower is better) Translates to: STRYWYMGSFNSLNV*HIPRVTEASHSSPT Trigger: CGTTGGACTGCTGTGGCTGGCTTCTGTCACTCTGGGAATATGGCAGACATTTAATGAATTAAATGATCCCATGTACCAGTATCGGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS-3UTR CAA 90 bp | ACCATATTTGAACCTGTTCATCCTAACTGTGCCTTCAATGGTTCAGCACTTGAGGTGAAGTTCATATCCTaGATGGGCTGGTTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TIFEPVHPNCAFNGSALEVKFIS*MGWFRC Trigger: GCACCTGAACCAGCCCATCAAGGATATGAACTTCAC...CTCAAGTGCTGAACCATTGAAGGCACAGTTAGGATGAACAGGTTCAAATATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS GCA 72 bp | AGCTCGCGGTACGCCTCCTGCAGCCGCCGGCACAGCTaGTTGAGGCCACTGCAGAGCGGCGGCTCGAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSRYASCSRRHS*LRPLQSGGSNA Trigger: TGCGTTCGAGCCGCCGCTCTGCAGTGGCCTCAAGCAGCTGTGCCGGCGGCTGCAGGAGGCGTACCGCGAGCT 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
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| CDS GCA 72 bp | GGCGCGAGGTCCTCCTTGAGCTCGCGGTACGCCTCCTaGAGCCGCCGGCACAGCTGCTTGAGGCCACTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GARSSLSSRYAS*SRRHSCLRPLQ Trigger: CTGCAGTGGCCTCAAGCAGCTGTGCCGGCGGCTGCAGGAGGCGTACCGCGAGCTCAAGGAGGACCTCGCGCC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
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| CDS GCA 72 bp | AGCAGCAGCAGGGCCAGGAGGACAGACATCCACTTCTaGTCGATGCCCCAGTCCCTCATGGAGAACTTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRARRTDIHF*SMPQSLMENLR Trigger: GCGCAAGTTCTCCATGAGGGACTGGGGCATCGAGCAGAAGTGGATGTCTGTCCTCCTGGCCCTGCTGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS GCA 72 bp | GCAGGGCCAGGAGGACAGACATCCACTTCTGCTCGATaGCCCAGTCCCTCATGGAGAACTTGCGCAGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: AGPGGQTSTSAR*PSPSWRTCAGN Trigger: ATTCCCTGCGCAAGTTCTCCATGAGGGACTGGGGCATCGAGCAGAAGTGGATGTCTGTCCTCCTGGCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 72 bp | CATGGGTGCCAACCTGTAGTAGCGATCATCCTTGAATaGCGCGAGGTCCTCCTTGAGCTCGCGGTACGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HGCQPVVAIILE*REVLLELAVRL Trigger: GAGGCGTACCGCGAGCTCAAGGAGGACCTCGCGCCATTCAAGGATGATCGCTACTACAGGTTGGCACCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232383.2 |
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| CDS CCA 72 bp | AGCCAGAAGAGCAGCAGGGCACACAGGAACAGAGACTaGAAGAAGTCGTCCAGCATCCCCGGGAACCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SQKSSRAHRNRD*KKSSSIPGNQL Trigger: TAGCTGGTTCCCGGGGATGCTGGACGACTTCTTCCAGTCTCTGTTCCTGTGTGCCCTGCTGCTCTTCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS GCA 72 bp | GCCAAGGTGGGCCACGATGATTTCTGCACATTTCCCTaGACACGTGAGGGTCCTCGTCCGGTTGTGAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: AKVGHDDFCTFP*TREGPRPVVNL Trigger: AAGGTTCACAACCGGACGAGGACCCTCACGTGTGCAGGGAAATGTGCAGAAATCATCGTGGCCCACCTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 72 bp | AGTCACTGTCCGACTCTTCCCTGCACTTGGCACGGATaGCCTGGCCGTTCTGCAGGGGCATTTCTTCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: SHCPTLPCTWHG*PGRSAGAFLHS Trigger: ACTATGAAGAAATGCCCCTGCAGAACGGCCAGGCCATCCGTGCCAAGTGCAGGGAAGAGTCGGACAGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 72 bp | CATCCCCGGGAACCAGCTATTCACCAAGAAGGAGAGTaGGAAGAAAGGGTCATTGTAGAGCAGCAGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HPREPAIHQEGE*EERVIVEQQQG Trigger: GCCCTGCTGCTGCTCTACAATGACCCTTTCTTCCCACTCTCCTTCTTGGTGAATAGCTGGTTCCCGGGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS TCA 72 bp | CATTTCCCTGCACACGTGAGGGTCCTCGTCCGGTTGTaGACCTTGTTATGGATGTACGTCGTGGTTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: HFPAHVRVLVRL*TLLWMYVVVPS Trigger: AGATGGAACCACGACGTACATCCATAACAAGGTTCACAACCGGACGAGGACCCTCACGTGTGCAGGGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 72 bp | CAAATCACGATGAAGGTGAGCACCACAAACACGAAGTaGAACCAGATCTCCAGCCGGGAAAACGCAGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QITMKVSTTNTK*NQISSRENAGL Trigger: CAACCCTGCGTTTTCCCGGCTGGAGATCTGGTTCCACTTCGTGTTTGTGGTGCTCACCTTCATCGTGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 72 bp | CAGACATCCACTTCTGCTCGATGCCCCAGTCCCTCATaGAGAACTTGCGCAGGGAATGTACAAACAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QTSTSARCPSPS*RTCAGNVQTGK Trigger: TTTGCCTGTTTGTACATTCCCTGCGCAAGTTCTCCATGAGGGACTGGGGCATCGAGCAGAAGTGGATGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CAA 72 bp | CACTTCTGCTCGATGCCCCAGTCCCTCATGGAGAACTaGCGCAGGGAATGTACAAACAGGCAAATCACGATG | + |
|
Preference number: 6 (lower is better) Translates to: HFCSMPQSLMEN*RRECTNRQITM Trigger: CATCGTGATTTGCCTGTTTGTACATTCCCTGCGCAAGTTCTCCATGAGGGACTGGGGCATCGAGCAGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CAA 90 bp | ACAGACATCCACTTCTGCTCGATGCCCCAGTCCCTCATGGAGAACTaGCGCAGGGAATGTACAAACAGGCAAATCACGATGAAGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TDIHFCSMPQSLMEN*RRECTNRQITMKVS Trigger: GCTCACCTTCATCGTGATTTGCCTGTTTGTACATTCCCTGCGCAAGTTCTCCATGAGGGACTGGGGCATCGAGCAGAAGTGGATGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS TCA 72 bp | CCTCGATGCCGACGAAGACGGTCAGTCCAAAACAGATaGAGAAGACAACAAACACAAGGACGAAGTGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRCRRRRSVQNR*RRQQTQGRSGA Trigger: AGCGCCACTTCGTCCTTGTGTTTGTTGTCTTCTTCATCTGTTTTGGACTGACCGTCTTCGTCGGCATCGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CAA 90 bp | CGTCCGGTTGTGAACCTTGTTATGGATGTACGTCGTGGTTCCATCTaGAGACACACCATCGACCTTCACTGTCATGGTGAAGCTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPVVNLVMDVRRGSI*RHTIDLHCHGEAGL Trigger: CAAACCAGCTTCACCATGACAGTGAAGGTCGATGGTGTGTCTCAAGATGGAACCACGACGTACATCCATAACAAGGTTCACAACCGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 72 bp | TCGTCCGGTTGTGAACCTTGTTATGGATGTACGTCGTaGTTCCATCTTGAGACACACCATCGACCTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGCEPCYGCTS*FHLETHHRPSL Trigger: CAGTGAAGGTCGATGGTGTGTCTCAAGATGGAACCACGACGTACATCCATAACAAGGTTCACAACCGGACGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS TCA 72 bp | CATCTTGAGACACACCATCGACCTTCACTGTCATGGTaGAGCTGGTTTGGATGGATGTTTCTTCTGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLETHHRPSLSW*SWFGWMFLLRA Trigger: AGCCCTCAGAAGAAACATCCATCCAAACCAGCTTCACCATGACAGTGAAGGTCGATGGTGTGTCTCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS TCA 72 bp | GCACTACAAAGGTCAACGCAGTCAAAAACTTTAACCTaGGATCCACGTAAGGCATATGACGGAGCTCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ALQRSTQSKTLT*DPRKAYDGARS Trigger: GCTCCGAGCTCCGTCATATGCCTTACGTGGATCTCAGGTTAAAGTTTTTGACTGCGTTGACCTTTGTAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CCA 72 bp | GGCTCCAGCTCCACAACGCACATCAGCCATAGTTGTTaGTTATATGTGGACAGTGGGTTTGAAGGTATAACT | + |
|
Preference number: 6 (lower is better) Translates to: GSSSTTHISHSC*LYVDSGFEGIT Trigger: AGTTATACCTTCAAACCCACTGTCCACATATAACCAACAACTATGGCTGATGTGCGTTGTGGAGCTGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS CAA 72 bp | GTGAACCTTGTTATGGATGTACGTCGTGGTTCCATCTaGAGACACACCATCGACCTTCACTGTCATGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VNLVMDVRRGSI*RHTIDLHCHGE Trigger: TTCACCATGACAGTGAAGGTCGATGGTGTGTCTCAAGATGGAACCACGACGTACATCCATAACAAGGTTCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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| CDS GCA 72 bp | TACTGGTACATGGGATCATTTAATTCATTAAATGTCTaGCATATTCCCAGAGTGACAGAAGCCAGCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: YWYMGSFNSLNV*HIPRVTEASHS Trigger: GCTGTGGCTGGCTTCTGTCACTCTGGGAATATGGCAGACATTTAATGAATTAAATGATCCCATGTACCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088940.6 ENSMUST00000232383.2 |
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