Pregenerated sensors for TMEM179 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054013Ensembl transcript IDs: ENSMUST00000066791.7, ENSMUST00000222836.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACCACGTGCGCTGGAGCCTGTGGTGGTGCAAAGGCTGCTAACCTaGCGGCGACGGCACCTCGGTTCTGCACTCACACCCCCATCCACA | + |
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Preference number: 1 (lower is better) Translates to: GPRALEPVVVQRLLT*RRRHLGSALTPPST Trigger: TGTGGATGGGGGTGTGAGTGCAGAACCGAGGTGCCGTCGCCGCCAGGTTAGCAGCCTTTGCACCACCACAGGCTCCAGCGCACGTGGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR CCA 90 bp | CCCATGACAGCCAAGCAGCCCAGGATGGCCTCTCAGAGCAGGGGATaGAGCCCAGCCCAGGGTCCCACATTCCTACCAGGATCCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PMTAKQPRMASQSRG*SPAQGPTFLPGSSA Trigger: GGCAGAGGATCCTGGTAGGAATGTGGGACCCTGGGCTGGGCTCCATCCCCTGCTCTGAGAGGCCATCCTGGGCTGCTTGGCTGTCATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR TCA 90 bp | GGCCAAAGCCCTCAGAGAAGACTGGAGTGTCGGTCGGCCCAACCCTaGCCTCCTCAGACAGGCACCCCCTTGCACAGCACCCTGACCATC | + |
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Preference number: 1 (lower is better) Translates to: GQSPQRRLECRSAQP*PPQTGTPLHSTLTI Trigger: GATGGTCAGGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTCAGGGTTGGGCCGACCGACACTCCAGTCTTCTCTGAGGGCTTTGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR GCA 90 bp | GGACTGGAAGCTGGAAGTCACCCCCTCCCCAAGTCTCTGGATCTCTaGCCCATCACTGTCAGGCTCTCCATGGGAACTCAGGTGCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: GLEAGSHPLPKSLDL*PITVRLSMGTQVPC Trigger: GCAGGGCACCTGAGTTCCCATGGAGAGCCTGACAGTGATGGGGCAGAGATCCAGAGACTTGGGGAGGGGGTGACTTCCAGCTTCCAGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR GCA 90 bp | AGCCCAGCCCAGGGTCCCACATTCCTACCAGGATCCTCTGCCCGCTaGCTTCTCCAGTGCCTTCTGAGAACCTTGGCTGAGTGCTATAGG | + |
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Preference number: 1 (lower is better) Translates to: SPAQGPTFLPGSSAR*LLQCLLRTLAECYR Trigger: CCTATAGCACTCAGCCAAGGTTCTCAGAAGGCACTGGAGAAGGCAGCGGGCAGAGGATCCTGGTAGGAATGTGGGACCCTGGGCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR CCA 90 bp | ATCCTCTTCTGGGAGCTCATCAAGGCCAAAGCCCTCAGAGAAGACTaGAGTGTCGGTCGGCCCAACCCTGACCTCCTCAGACAGGCACCC | + |
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Preference number: 1 (lower is better) Translates to: ILFWELIKAKALRED*SVGRPNPDLLRQAP Trigger: GGGTGCCTGTCTGAGGAGGTCAGGGTTGGGCCGACCGACACTCCAGTCTTCTCTGAGGGCTTTGGCCTTGATGAGCTCCCAGAAGAGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR CCA 90 bp | GCCATCCATTCCATAAGACCTCTCTTGGACAGACACCCCTGCCCATaGCTTCAGCCAACAGGTCCTGCCAACACTCCTAGGCCCAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: AIHSIRPLLDRHPCP*LQPTGPANTPRPRG Trigger: GCCTCTGGGCCTAGGAGTGTTGGCAGGACCTGTTGGCTGAAGCCATGGGCAGGGGTGTCTGTCCAAGAGAGGTCTTATGGAATGGATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR TCA 90 bp | ATGCCACCTAGAAAGCCTCAAAGGGAGGAGAGTGGAACTCTCCCATaGCAGCCAAGCAGCCCAGGATGGCCTCTCAGAGCAGGGGATGGA | + |
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Preference number: 1 (lower is better) Translates to: MPPRKPQREESGTLP*QPSSPGWPLRAGDG Trigger: TCCATCCCCTGCTCTGAGAGGCCATCCTGGGCTGCTTGGCTGTCATGGGAGAGTTCCACTCTCCTCCCTTTGAGGCTTTCTAGGTGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR TCA 90 bp | CCCAACCCTGACCTCCTCAGACAGGCACCCCCTTGCACAGCACCCTaGCCATCCTTGCTGGCTTCAATTTTTAGGGCCCAACTGACACAC | + |
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Preference number: 1 (lower is better) Translates to: PNPDLLRQAPPCTAP*PSLLASIFRAQLTH Trigger: GTGTGTCAGTTGGGCCCTAAAAATTGAAGCCAGCAAGGATGGTCAGGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTCAGGGTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR GCA 90 bp | GCCTCTTCGGCCATGGGGGCCTCACCCTTGCAACACAGAGAACCATaGCACCTAGAAAGCCTCAAAGGGAGGAGAGTGGAACTCTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: ASSAMGASPLQHREP*HLESLKGRRVELSH Trigger: ATGGGAGAGTTCCACTCTCCTCCCTTTGAGGCTTTCTAGGTGGCATGGTTCTCTGTGTTGCAAGGGTGAGGCCCCCATGGCCGAAGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR CCA 90 bp | ACAAAGGGTCACACGGGTGAAGGAGTATGCGTCAAAGGCCAGGACTaGAAGCTGGAAGTCACCCCCTCCCCAAGTCTCTGGATCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: TKGHTGEGVCVKGQD*KLEVTPSPSLWISA Trigger: GGCAGAGATCCAGAGACTTGGGGAGGGGGTGACTTCCAGCTTCCAGTCCTGGCCTTTGACGCATACTCCTTCACCCGTGTGACCCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR GCA 90 bp | TCTCTTGCCATCCATTCCATAAGACCTCTCTTGGACAGACACCCCTaGCCATGGCTTCAGCCAACAGGTCCTGCCAACACTCCTAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: SLAIHSIRPLLDRHP*PWLQPTGPANTPRP Trigger: GGGCCTAGGAGTGTTGGCAGGACCTGTTGGCTGAAGCCATGGGCAGGGGTGTCTGTCCAAGAGAGGTCTTATGGAATGGATGGCAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR GCA 90 bp | CTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTaGAGCCTCTGCCTGTCTCTTGCCATCCATTCCATAAGACCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LERSRDVWQATWGPL*SLCLSLAIHSIRPL Trigger: GAGAGGTCTTATGGAATGGATGGCAAGAGACAGGCAGAGGCTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR TCA 90 bp | CAGCACCCTGACCATCCTTGCTGGCTTCAATTTTTAGGGCCCAACTaGCACACACACACACACACAAAGGCTCCTCACAGTGAGCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: QHPDHPCWLQFLGPN*HTHTHTKAPHSEPG Trigger: TCCAGGCTCACTGTGAGGAGCCTTTGTGTGTGTGTGTGTGTGTCAGTTGGGCCCTAAAAATTGAAGCCAGCAAGGATGGTCAGGGTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR TCA 90 bp | ACACGGAGGCATCACTACCATCACTACCAGCTTCTCCAGGAAGACTaGAACCAGGGCTTCCCTGTAGCAAGCTGGAAAGGAGCAGAGATG | + |
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Preference number: 1 (lower is better) Translates to: TRRHHYHHYQLLQED*NQGFPVASWKGAEM Trigger: CATCTCTGCTCCTTTCCAGCTTGCTACAGGGAAGCCCTGGTTTCAGTCTTCCTGGAGAAGCTGGTAGTGATGGTAGTGATGCCTCCGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCTTATGGAAGGGGCAGGGACCACGTGCGCTGGAGCCTGTGGTGGTGCAAAGCGCCCCCTCCCCATaGAGGCCTCAGGAAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPLWKGQGPRALEPVVVQSAPSP*RPQERG Trigger: CCCCCTTTCCTGAGGCCTGCATGGGGAGGGGGCGCT...TTGCACCACCACAGGCTCCAGCGCACGTGGTCCCTGCCCCTTCCATAAGGGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | GTCGGTCGGCCCAACCCTGACCTCCTCAGACAGGCACCCCCTTGCACAGCACCCGGATCCTCTGCCCGCTaGCTTCTCCAGTGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: VGRPNPDLLRQAPPCTAPGSSAR*LLQCLL Trigger: CAGAAGGCACTGGAGAAGGCAGCGGGCAGAGGATCC...GGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTCAGGGTTGGGCCGACCGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | GTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCCTCAGACACAGTTGGCCAGCCTGGATaGGTCCCCAGCGCCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VPSTWKHTSHRWTLASDTVGQPG*VPSAPS Trigger: GGAGGGGGCGCTGGGGACCCATCCAGGCTGGCCAAC...TGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCTTATGGAAGGGGCAGGGACCACGTGCGCTGGAGCCTGTGGTGGTGCAACCCTCCCCAAGTCTCTaGATCTCTGCCCCATCACTG | + |
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Preference number: 2 (lower is better) Translates to: SPLWKGQGPRALEPVVVQPSPSL*ISAPSL Trigger: CAGTGATGGGGCAGAGATCCAGAGACTTGGGGAGGG...TTGCACCACCACAGGCTCCAGCGCACGTGGTCCCTGCCCCTTCCATAAGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCGTGCCCTGCTCACGGTaGGCGGGGCCAAGAGACACA | + |
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Preference number: 2 (lower is better) Translates to: LEACAFHLETHQPQMDTGVPCSR*AGPRDT Trigger: TGTGTCTCTTGGCCCCGCCCACCGTGAGCAGGGCAC...GCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | GTCGGCCCAACCCTGACCTCCTCAGACAGGCACCCCCTTGCACAGCACCCTGACCTTGTGCCTTCCACCTaGAAACACACCAGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: VGPTLTSSDRHPLAQHPDLVPST*KHTSHR Trigger: TCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAG...GTCAGGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTCAGGGTTGGGCCGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGAAGACTGGAGTGTCGGTCGGCCCAACCCTGACCTCCTCAGACAGGCACTGTCAGGCTCTCCATaGGAACTCAGGTGCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LREDWSVGRPNPDLLRQALSGSP*ELRCPA Trigger: AGCAGGGCACCTGAGTTCCCATGGAGAGCCTGACAG...TGCCTGTCTGAGGAGGTCAGGGTTGGGCCGACCGACACTCCAGTCTTCTCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTGCAGAGTGGAACTCTCCCATaGCAGCCAAGCAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QAGKEQRCLAGNLGTSLQSGTLP*QPSSPG Trigger: TCCTGGGCTGCTTGGCTGTCATGGGAGAGTTCCACT...CTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGAGGGTGTGGAGAAGAGACCAGGTCAGTTTGGAGACCAGATCCTCTTCTGGAACTCAGGTGCCCTaGTCACGGTGGGCGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: CVRVWRRDQVSLETRSSSGTQVP*SRWAGP Trigger: TGGCCCCGCCCACCGTGAGCAGGGCACCTGAGTTCC...AGAAGAGGATCTGGTCTCCAAACTGACCTGGTCTCTTCTCCACACCCTCACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCGCCAGGACTGGAAGCTaGAAGTCACCCCCTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LEACAFHLETHQPQMDTGARTGS*KSPPPQ Trigger: TTGGGGAGGGGGTGACTTCCAGCTTCCAGTCCTGGC...GCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTGCAGGAAGTCAGCCCCTTATaGAAGGGGCAGGGACCACGT | + |
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Preference number: 2 (lower is better) Translates to: QAGKEQRCLAGNLGTSLQEVSPL*KGQGPR Trigger: ACGTGGTCCCTGCCCCTTCCATAAGGGGCTGACTTC...CTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | GTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCCTCAGACACAGGGCCAAGAGACACATaGAGAGCTGTGTTGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPSTWKHTSHRWTLASDTGPRDT*RAVLAS Trigger: GCTGGCCAACACAGCTCTGCATGTGTCTCTTGGCCC...TGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | CACCAGCCACAGATGGACACTGGCCTCAGACACAGGTCAGGATCACCTTGCTTGGTCAAAGGCCAGGACTaGAAGCTGGAAGTCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: HQPQMDTGLRHRSGSPCLVKGQD*KLEVTP Trigger: GGGGGTGACTTCCAGCTTCCAGTCCTGGCCTTTGAC...CAAGCAAGGTGATCCTGACCTGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGCTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTGCAGCACACCAGCCACAGATaGACACTGGCCTCAGACACA | + |
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Preference number: 2 (lower is better) Translates to: QAGKEQRCLAGNLGTSLQHTSHR*TLASDT Trigger: TGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTG...CTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCACGGGTGAAGGAGTATaGGTCAAAGGCCAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: LEACAFHLETHQPQMDTGTGEGV*VKGQDW Trigger: CCAGTCCTGGCCTTTGACGCATACTCCTTCACCCGT...GCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | ACACACCAGCCACAGATGGACACTGGCCTCAGACACAGGTCAGGATCACCTTGCCGCTGCCTTCTCCAGTaGCTTCTGAGAACCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: THQPQMDTGLRHRSGSPCRCLLQ*LLRTLA Trigger: AGCCAAGGTTCTCAGAAGGCACTGGAGAAGGCAGCG...GCAAGGTGATCCTGACCTGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR CAA 90 bp | CACACACACACACACACAAAGGCTCCTCACAGTGAGCCTGGAAGCTaGTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGG | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTKAPHSEPGS*CLPPGNTPATDGHW Trigger: CCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAGGCTCACTGTGAGGAGCCTTTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCTCCTCACAGTGAGCCTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGTTCTCCAGTGCCTTCTaGGAACCTTGGCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RLLTVSLEACAFHLETHQFSSAF*EPWLSA Trigger: AGCACTCAGCCAAGGTTCTCAGAAGGCACTGGAGAA...CTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAGGCTCACTGTGAGGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR TCA 90 bp | CAAGCTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTGCAGCAGGATCACCTTGCTTaGAAATTGGGGACAGCGTTG | + |
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Preference number: 2 (lower is better) Translates to: QAGKEQRCLAGNLGTSLQQDHLA*KLGTAL Trigger: CAACGCTGTCCCCAATTTTCAAGCAAGGTGATCCTG...CTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGAGGGTGTGGAGAAGAGACCAGGTCAGTTTGGAGACCAGATCCTCTTCTCCTACCAGGATCCTCTaGCCGCTGCCTTCTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: CVRVWRRDQVSLETRSSSPTRIL*PLPSPV Trigger: CACTGGAGAAGGCAGCGGGCAGAGGATCCTGGTAGG...AGAAGAGGATCTGGTCTCCAAACTGACCTGGTCTCTTCTCCACACCCTCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACCAGCCACAGATGGACACTGGCCTCAGACACAGGTCAGGATCACCTTGCTCAAAGGGAGGAGAGTaGAACTCTCCCATGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: THQPQMDTGLRHRSGSPCSKGGE*NSPMTA Trigger: GGCTGTCATGGGAGAGTTCCACTCTCCTCCCTTTGA...GCAAGGTGATCCTGACCTGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACGGAGGCATCACTACCATCACTACCAGCTTCTCCAGGAAGACTGAAACCTTCCCCAGGAGTCCCTaGAACACCAACATCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: THGGITTITTSFSRKTETFPRSP*NTNIWG Trigger: CCCCCAGATGTTGGTGTTCCAGGGACTCCTGGGGAA...GGTTTCAGTCTTCCTGGAGAAGCTGGTAGTGATGGTAGTGATGCCTCCGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR TCA 90 bp | ACACACGGAGGCATCACTACCATCACTACCAGCTTCTCCAGGAAGACTGAAACCAAAGGCTCCTCACAGTaGGCCTGGAAGCTTGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: THGGITTITTSFSRKTETKGSSQ*AWKLVP Trigger: AGGCACAAGCTTCCAGGCTCACTGTGAGGAGCCTTT...GGTTTCAGTCTTCCTGGAGAAGCTGGTAGTGATGGTAGTGATGCCTCCGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | CACCAGCCACAGATGGACACTGGCCTCAGACACAGGTCAGGATCACCTTGCTTGCAACACAGAGAACCATaGCACCTAGAAAGCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HQPQMDTGLRHRSGSPCLQHREP*HLESLK Trigger: TTTGAGGCTTTCTAGGTGGCATGGTTCTCTGTGTTG...CAAGCAAGGTGATCCTGACCTGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGAGGGTGTGGAGAAGAGACCAGGTCAGTTTGGAGACCAGATCCTCTTCTAGAACCTTGGCTGAGTaGTATAGGATGGGAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: CVRVWRRDQVSLETRSSSRTLAE*YRMGSQ Trigger: CTGACTTCCCATCCTATAGCACTCAGCCAAGGTTCT...AGAAGAGGATCTGGTCTCCAAACTGACCTGGTCTCTTCTCCACACCCTCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGAGGGTGTGGAGAAGAGACCAGGTCAGTTTGGAGACCAGATCCTCTTCTACATGCTCACATGCATaGACATATATAGACAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: CVRVWRRDQVSLETRSSSTCSHA*TYIDKG Trigger: CCCTTTGTCTATATATGTGCATGCATGTGAGCATGT...AGAAGAGGATCTGGTCTCCAAACTGACCTGGTCTCTTCTCCACACCCTCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR GCA 90 bp | TTATTTTATTTTGACTTGAGGATCAGACACACGGAGGCATCACTACCATCACTAAAGTCTCTGGATCTCTaGCCCATCACTGTCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LFYFDLRIRHTEASLPSLKSLDL*PITVRL Trigger: GAGCCTGACAGTGATGGGGCAGAGATCCAGAGACTT...TAGTGATGGTAGTGATGCCTCCGTGTGTCTGATCCTCAAGTCAAAATAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR CCA 72 bp | GCGCTGGAGCCTGTGGTGGTGCAAAGGCTGCTAACCTaGCGGCGACGGCACCTCGGTTCTGCACTCACACCC | + |
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Preference number: 3 (lower is better) Translates to: ALEPVVVQRLLT*RRRHLGSALTP Trigger: GGGTGTGAGTGCAGAACCGAGGTGCCGTCGCCGCCAGGTTAGCAGCCTTTGCACCACCACAGGCTCCAGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR GCA 72 bp | GCCCCATCACTGTCAGGCTCTCCATGGGAACTCAGGTaGCCTGCTCACGGTGGGCGGGGCCAAGAGACACAT | + |
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Preference number: 3 (lower is better) Translates to: APSLSGSPWELR*PAHGGRGQETH Trigger: ATGTGTCTCTTGGCCCCGCCCACCGTGAGCAGGGCACCTGAGTTCCCATGGAGAGCCTGACAGTGATGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR-3UTR CAA 90 bp | GTCGGCCCAACCCTGACCTCCTCAGACAGGCACCCCCTTGCACAGCACCCTGACATGGGGGCCTCACCCTaGCAACACAGAGAACCATGC | + |
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Preference number: 3 (lower is better) Translates to: VGPTLTSSDRHPLAQHPDMGASP*QHREPC Trigger: GCATGGTTCTCTGTGTTGCAAGGGTGAGGCCCCCAT...GTCAGGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTCAGGGTTGGGCCGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR TCA 72 bp | CTGCAGACTAGGGCCAGCAACATTGAACGCACTCACTaGGATCCAGATGGGCGGGGCCTCTTCGGCCATGGG | + |
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Preference number: 3 (lower is better) Translates to: LQTRASNIERTH*DPDGRGLFGHG Trigger: CCCATGGCCGAAGAGGCCCCGCCCATCTGGATCTCAGTGAGTGCGTTCAATGTTGCTGGCCCTAGTCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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| 3UTR CCA 72 bp | TGGCTGAGTGCTATAGGATGGGAAGTCAGCCCCTTATaGAAGGGGCAGGGACCACGTGCGCTGGAGCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: WLSAIGWEVSPL*KGQGPRALEPV Trigger: CACAGGCTCCAGCGCACGTGGTCCCTGCCCCTTCCATAAGGGGCTGACTTCCCATCCTATAGCACTCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR GCA 72 bp | CAGGGTCCCACATTCCTACCAGGATCCTCTGCCCGCTaGCTTCTCCAGTGCCTTCTGAGAACCTTGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGPTFLPGSSAR*LLQCLLRTLAE Trigger: CTCAGCCAAGGTTCTCAGAAGGCACTGGAGAAGGCAGCGGGCAGAGGATCCTGGTAGGAATGTGGGACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CCA 72 bp | CACACGGGTGAAGGAGTATGCGTCAAAGGCCAGGACTaGAAGCTGGAAGTCACCCCCTCCCCAAGTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HTGEGVCVKGQD*KLEVTPSPSLW Trigger: CCAGAGACTTGGGGAGGGGGTGACTTCCAGCTTCCAGTCCTGGCCTTTGACGCATACTCCTTCACCCGTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CCA 72 bp | TGGGAGCTCATCAAGGCCAAAGCCCTCAGAGAAGACTaGAGTGTCGGTCGGCCCAACCCTGACCTCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: WELIKAKALRED*SVGRPNPDLLR Trigger: TCTGAGGAGGTCAGGGTTGGGCCGACCGACACTCCAGTCTTCTCTGAGGGCTTTGGCCTTGATGAGCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR TCA 72 bp | AGAAAGCCTCAAAGGGAGGAGAGTGGAACTCTCCCATaGCAGCCAAGCAGCCCAGGATGGCCTCTCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RKPQREESGTLP*QPSSPGWPLRA Trigger: TGCTCTGAGAGGCCATCCTGGGCTGCTTGGCTGTCATGGGAGAGTTCCACTCTCCTCCCTTTGAGGCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR TCA 72 bp | GACCTCCTCAGACAGGCACCCCCTTGCACAGCACCCTaGCCATCCTTGCTGGCTTCAATTTTTAGGGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DLLRQAPPCTAP*PSLLASIFRAQ Trigger: TTGGGCCCTAAAAATTGAAGCCAGCAAGGATGGTCAGGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR GCA 72 bp | GCCATGGGGGCCTCACCCTTGCAACACAGAGAACCATaGCACCTAGAAAGCCTCAAAGGGAGGAGAGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AMGASPLQHREP*HLESLKGRRVE Trigger: TTCCACTCTCCTCCCTTTGAGGCTTTCTAGGTGGCATGGTTCTCTGTGTTGCAAGGGTGAGGCCCCCATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CCA 72 bp | GTGAAGGAGTATGCGTCAAAGGCCAGGACTGGAAGCTaGAAGTCACCCCCTCCCCAAGTCTCTGGATCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VKEYASKARTGS*KSPPPQVSGSL Trigger: CAGAGATCCAGAGACTTGGGGAGGGGGTGACTTCCAGCTTCCAGTCCTGGCCTTTGACGCATACTCCTTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCCAGGTCAGGATCACCTaGCTTGAAAATTGGGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LEACAFHLETHQPQMDTGQVRIT*LENWGQ Trigger: CTGTCCCCAATTTTCAAGCAAGGTGATCCTGACCTG...GCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR TCA 72 bp | GGCAGTGTCGCCATGTCCCATAGATTAGGGCTTGTGTaGGGGTGTGGAGAAGAGACCAGGTCAGTTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GSVAMSHRLGLV*GCGEETRSVWR Trigger: TCTCCAAACTGACCTGGTCTCTTCTCCACACCCTCACACAAGCCCTAATCTATGGGACATGGCGACACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR GCA 72 bp | TGCCTTCTCCAGTGCCTTCTGAGAACCTTGGCTGAGTaGTATAGGATGGGAAGTCAGCCCCTTATGGAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: CLLQCLLRTLAE*YRMGSQPLMEG Trigger: CCCTTCCATAAGGGGCTGACTTCCCATCCTATAGCACTCAGCCAAGGTTCTCAGAAGGCACTGGAGAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CCA 72 bp | CTTCCACCTGGAAACACACCAGCCACAGATGGACACTaGCCTCAGACACAGGTCAGGATCACCTTGCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPPGNTPATDGH*PQTQVRITLLE Trigger: TTCAAGCAAGGTGATCCTGACCTGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CCA 72 bp | AAGAGACCAGGTCAGTTTGGAGACCAGATCCTCTTCTaGGAGCTCATCAAGGCCAAAGCCCTCAGAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KRPGQFGDQILF*ELIKAKALRED Trigger: GTCTTCTCTGAGGGCTTTGGCCTTGATGAGCTCCCAGAAGAGGATCTGGTCTCCAAACTGACCTGGTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR TCA 72 bp | CATGCATGCACATATATAGACAAAGGGTCACACGGGTaGAGGAGTATGCGTCAAAGGCCAGGACTGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HACTYIDKGSHG*RSMRQRPGLEA Trigger: AGCTTCCAGTCCTGGCCTTTGACGCATACTCCTTCACCCGTGTGACCCTTTGTCTATATATGTGCATGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR TCA 72 bp | GACCATCCTTGCTGGCTTCAATTTTTAGGGCCCAACTaGCACACACACACACACACAAAGGCTCCTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: DHPCWLQFLGPN*HTHTHTKAPHS Trigger: ACTGTGAGGAGCCTTTGTGTGTGTGTGTGTGTGTCAGTTGGGCCCTAAAAATTGAAGCCAGCAAGGATGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CCA 90 bp | GTCGGTCGGCCCAACCCTGACCTCCTCAGACAGGCACCCCCTTGCACAGCACCCGCCGTTCTCGGACAATaGCACCACCACCACGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGRPNPDLLRQAPPCTAPAVLGQ*HHHHEA Trigger: AGCTTCGTGGTGGTGGTGCCATTGTCCGAGAACGGC...GGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTCAGGGTTGGGCCGACCGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCTCACAGTGAGCCTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGCCCACTCCTGCACAGTaGAGCGCTCCCGCCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLTVSLEACAFHLETHQPTPAQ*SAPAPA Trigger: TGCAGGGGCGGGAGCGCTTCACTGTGCAGGAGTGGG...CTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAGGCTCACTGTGAGGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTGCAGGGAAAGCCAGAGTGGTaGTCGCCAGCCAGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QAGKEQRCLAGNLGTSLQGKPEW*SPARPA Trigger: GGCTGGCCTGGCTGGCGATCACCACTCTGGCTTTCC...CTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CAA 72 bp | ATGGGCGGGGCCTCTTCGGCCATGGGGGCCTCACCCTaGCAACACAGAGAACCATGCCACCTAGAAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGGASSAMGASP*QHREPCHLESL Trigger: GAGGCTTTCTAGGTGGCATGGTTCTCTGTGTTGCAAGGGTGAGGCCCCCATGGCCGAAGAGGCCCCGCCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR GCA 90 bp | AAAGAGGCAGCTGCCAAGGTAGACCCACACCTGAGGCAGATCCTAGGTCCCAGAAGCGTGCGCCATGCGTaGGCAGCAGCCAGCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KEAAAKVDPHLRQILGPRSVRHA*AAASSS Trigger: ACTGCTGCTGGCTGCTGCGCACGCATGGCGCACGCT...TCTGGGACCTAGGATCTGCCTCAGGTGTGGGTCTACCTTGGCAGCTGCCTCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTTCAGCCAACAGGTCCTGCCAACACTCCTAGGCCCAGAGGCCCTTCCCCAAGCCCTCGTGTCCCTTaGAGAGGAAGAAGAGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLQPTGPANTPRPRGPSPSPRVP*RGRRAC Trigger: GCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCT...TGGGGAAGGGCCTCTGGGCCTAGGAGTGTTGGCAGGACCTGTTGGCTGAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGAAGACTGGAGTGTCGGTCGGCCCAACCCTGACCTCCTCAGACAGGCACGGCCACGAAAGTCGTaGCCGTTCTCGGACAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LREDWSVGRPNPDLLRQARPRKS*PFSDNG Trigger: GCCATTGTCCGAGAACGGCCACGACTTTCGTGGCCG...TGCCTGTCTGAGGAGGTCAGGGTTGGGCCGACCGACACTCCAGTCTTCTCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CCA 90 bp | ACACACGGAGGCATCACTACCATCACTACCAGCTTCTCCAGGAAGACTGAAACCGCGGCAGGCAGCCGGTaGGCCCCACTCCTGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: THGGITTITTSFSRKTETAAGSR*APLLHS Trigger: ACTGTGCAGGAGTGGGGCCCACCGGCTGCCTGCCGC...GGTTTCAGTCTTCCTGGAGAAGCTGGTAGTGATGGTAGTGATGCCTCCGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR TCA 90 bp | TGGCTTCAGCCAACAGGTCCTGCCAACACTCCTAGGCCCAGAGGCCCTTCCCCACCACCACCACGAAGCTaGACAAGAAGGCCAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WLQPTGPANTPRPRGPSPPPPRS*TRRPES Trigger: ACTTTCTGGCCTTCTTGTTCAGCTTCGTGGTGGTGG...TGGGGAAGGGCCTCTGGGCCTAGGAGTGTTGGCAGGACCTGTTGGCTGAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTGCAGAGAAGCTCCTTCTCGTaGACCAGGCTGTCCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAGKEQRCLAGNLGTSLQRSSFS*TRLSNR Trigger: CCTGTTGGACAGCCTGGTTCACGAGAAGGAGCTTCT...CTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CCA 90 bp | GTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCCTCAGACACAAACTCCTCGCAGCTGTaGGGTGTGGAGCCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSTWKHTSHRWTLASDTNSSQL*GVEPFS Trigger: TGAGAAGGGCTCCACACCCCACAGCTGCGAGGAGTT...TGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGAAAGGAGCAGAGATGTCTGGCAGGCAACCTGGGGACCTCTCTGCAGCGATGGTGCTGGCAATaGAGACCAGGAAGACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QAGKEQRCLAGNLGTSLQRWCWQ*RPGRPQ Trigger: TTGTGGTCTTCCTGGTCTTCATTGCCAGCACCATCG...CTGCAGAGAGGTCCCCAGGTTGCCTGCCAGACATCTCTGCTCCTTTCCAGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCTCACAGTGAGCCTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGTGTCACACCACATGGTaGAGCCCACACTCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLTVSLEACAFHLETHQCHTTW*SPHSRW Trigger: CCATCGTGAGTGTGGGCTTCACCATGTGGTGTGACA...CTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAGGCTCACTGTGAGGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR TCA 90 bp | ACACACCAGCCACAGATGGACACTGGCCTCAGACACAGGTCAGGATCACCTTGCTGGAGCCCTTCTCAGTaGTGGTGTCACACCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: THQPQMDTGLRHRSGSPCWSPSQ*WCHTTW Trigger: CCATGTGGTGTGACACCATCACTGAGAAGGGCTCCA...GCAAGGTGATCCTGACCTGTGTCTGAGGCCAGTGTCCATCTGTGGCTGGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTCTCTTGCCATCCATTCCATAAGACCTCTCTTGGACAGACACCCCTGCGCACTCTTCTCCCCCTaGAAGGAGGTGCGGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLSLAIHSIRPLLDRHPCALFSP*KEVREV Trigger: TACCTCCCGCACCTCCTTCCAGGGGGAGAAGAGTGC...GCAGGGGTGTCTGTCCAAGAGAGGTCTTATGGAATGGATGGCAAGAGACAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTCTCTTGCCATCCATTCCATAAGACCTCTCTTGGACAGACACCCCTGCCCTGCATCGTCAGGTTaGCACTCAGCCACATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSLAIHSIRPLLDRHPCPASSG*HSATYP Trigger: AGGGTATGTGGCTGAGTGCCAACCTGACGATGCAGG...GCAGGGGTGTCTGTCCAAGAGAGGTCTTATGGAATGGATGGCAAGAGACAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CAA 72 bp | ACACACACAAAGGCTCCTCACAGTGAGCCTGGAAGCTaGTGCCTTCCACCTGGAAACACACCAGCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: THTKAPHSEPGS*CLPPGNTPATD Trigger: ATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAGGCTCACTGTGAGGAGCCTTTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| 3UTR CAA 72 bp | TGCCTGTCTCTTGCCATCCATTCCATAAGACCTCTCTaGGACAGACACCCCTGCCCATGGCTTCAGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLSLAIHSIRPL*DRHPCPWLQPT Trigger: TGTTGGCTGAAGCCATGGGCAGGGGTGTCTGTCCAAGAGAGGTCTTATGGAATGGATGGCAAGAGACAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR GCA 90 bp | TTATTTTATTTTGACTTGAGGATCAGACACACGGAGGCATCACTACCATCACTAGGTGGGCCCCACTCCTaGACAGTGAAGCGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LFYFDLRIRHTEASLPSLGGPHS*TVKRSR Trigger: GCGGGAGCGCTTCACTGTGCAGGAGTGGGGCCCACC...TAGTGATGGTAGTGATGCCTCCGTGTGTCTGATCCTCAAGTCAAAATAAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS GCA 90 bp | CTGGCGAGCAGGCTGAAGCGGCAGGCAGCCGGTGGGCCCCACTCCTaGACAGTGAAGCGCTCCCGCCCCTGCATCGTCAGGTTGGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LASRLKRQAAGGPHS*TVKRSRPCIVRLAL Trigger: GAGTGCCAACCTGACGATGCAGGGGCGGGAGCGCTTCACTGTGCAGGAGTGGGGCCCACCGGCTGCCTGCCGCTTCAGCCTGCTCGCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CAA 90 bp | GTCGGTCGGCCCAACCCTGACCTCCTCAGACAGGCACCCCCTTGCACAGCACCCGAGCCCTCGTGTCCCTaGCAGAGGAAGAAGAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRPNPDLLRQAPPCTAPEPSCP*QRKKSV Trigger: CACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTC...GGGTGCTGTGCAAGGGGGTGCCTGTCTGAGGAGGTCAGGGTTGGGCCGACCGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS GCA 90 bp | GCAGCCGGTGGGCCCCACTCCTGCACAGTGAAGCGCTCCCGCCCCTaGATCGTCAGGTTGGCACTCAGCCACATACCCTCGGTAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGGPHSCTVKRSRP*IVRLALSHIPSVKS Trigger: ACTCTTTACCGAGGGTATGTGGCTGAGTGCCAACCTGACGATGCAGGGGCGGGAGCGCTTCACTGTGCAGGAGTGGGGCCCACCGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS-3UTR CAA 90 bp | CTGGAAGCTTGTGCCTTCCACCTGGAAACACACCAGCCACAGATGGACACTGGCCCCTGCATCGTCAGGTaGGCACTCAGCCACATACCC | + |
|
Preference number: 5 (lower is better) Translates to: LEACAFHLETHQPQMDTGPCIVR*ALSHIP Trigger: GGGTATGTGGCTGAGTGCCAACCTGACGATGCAGGG...GCCAGTGTCCATCTGTGGCTGGTGTGTTTCCAGGTGGAAGGCACAAGCTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS CCA 90 bp | AGCCACATACCCTCGGTAAAGAGTAGGCAGCGGCCACGAAAGTCGTaGCCGTTCTCGGACAATGGCACCACCACCACGAAGCTGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHIPSVKSRQRPRKS*PFSDNGTTTTKLNK Trigger: CTTGTTCAGCTTCGTGGTGGTGGTGCCATTGTCCGAGAACGGCCACGACTTTCGTGGCCGCTGCCTACTCTTTACCGAGGGTATGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS TCA 72 bp | AGCGGCAGGCAGCCGGTGGGCCCCACTCCTGCACAGTaGAGCGCTCCCGCCCCTGCATCGTCAGGTTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGRQPVGPTPAQ*SAPAPASSGWH Trigger: GTGCCAACCTGACGATGCAGGGGCGGGAGCGCTTCACTGTGCAGGAGTGGGGCCCACCGGCTGCCTGCCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS GCA 72 bp | AGGCTGAAGCGGCAGGCAGCCGGTGGGCCCCACTCCTaGACAGTGAAGCGCTCCCGCCCCTGCATCGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLKRQAAGGPHS*TVKRSRPCIVR Trigger: CCTGACGATGCAGGGGCGGGAGCGCTTCACTGTGCAGGAGTGGGGCCCACCGGCTGCCTGCCGCTTCAGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS GCA 72 bp | GGGCCCCACTCCTGCACAGTGAAGCGCTCCCGCCCCTaGATCGTCAGGTTGGCACTCAGCCACATACCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GPHSCTVKRSRP*IVRLALSHIPS Trigger: CGAGGGTATGTGGCTGAGTGCCAACCTGACGATGCAGGGGCGGGAGCGCTTCACTGTGCAGGAGTGGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS CAA 90 bp | CCCCACTCCTGCACAGTGAAGCGCTCCCGCCCCTGCATCGTCAGGTaGGCACTCAGCCACATACCCTCGGTAAAGAGTAGGCAGCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PHSCTVKRSRPCIVR*ALSHIPSVKSRQRP Trigger: TGGCCGCTGCCTACTCTTTACCGAGGGTATGTGGCTGAGTGCCAACCTGACGATGCAGGGGCGGGAGCGCTTCACTGTGCAGGAGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS GCA 72 bp | TCAGGAAGGCGTAGAAGAAGGAGCCCTCGTGTCCCTTaGAGAGGAAGAAGAGCGTGCGCCATGCGTGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGRRRRRSPRVP*RGRRACAMRAQ Trigger: CTGCGCACGCATGGCGCACGCTCTTCTTCCTCTGCAAGGGACACGAGGGCTCCTTCTTCTACGCCTTCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS CCA 72 bp | GCAGCGGCCACGAAAGTCGTGGCCGTTCTCGGACAATaGCACCACCACCACGAAGCTGAACAAGAAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AAATKVVAVLGQ*HHHHEAEQEGQ Trigger: CTGGCCTTCTTGTTCAGCTTCGTGGTGGTGGTGCCATTGTCCGAGAACGGCCACGACTTTCGTGGCCGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS CCA 72 bp | CCCTCGGTAAAGAGTAGGCAGCGGCCACGAAAGTCGTaGCCGTTCTCGGACAATGGCACCACCACCACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSVKSRQRPRKS*PFSDNGTTTTK Trigger: CTTCGTGGTGGTGGTGCCATTGTCCGAGAACGGCCACGACTTTCGTGGCCGCTGCCTACTCTTTACCGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
||
| CDS CCA 72 bp | GCAGAGTTGTCGACGTTCAGCTCCAAGTCCGTTTCCTaGAACTCCTCGCAGCTGTGGGGTGTGGAGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AELSTFSSKSVS*NSSQLWGVEPF Trigger: GAAGGGCTCCACACCCCACAGCTGCGAGGAGTTCCAGGAAACGGACTTGGAGCTGAACGTCGACAACTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066791.7 ENSMUST00000222836.2 |
||
| CDS CAA 72 bp | TGCACAGTGAAGCGCTCCCGCCCCTGCATCGTCAGGTaGGCACTCAGCCACATACCCTCGGTAAAGAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CTVKRSRPCIVR*ALSHIPSVKSR Trigger: CCTACTCTTTACCGAGGGTATGTGGCTGAGTGCCAACCTGACGATGCAGGGGCGGGAGCGCTTCACTGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066791.7 |
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