Pregenerated sensors for TMEM177 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036975Ensembl transcript IDs: ENSMUST00000037906.6
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACAGCCACCAGAGTACCCTTCCTATGGTGTGTGGCCTTTCCTCTaGGTTACACTGGACCCAGGCTGGTATCCTTCAAGACTGCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PQPPEYPSYGVWPFL*VTLDPGWYPSRLPR Trigger: CCTGGGCAGTCTTGAAGGATACCAGCCTGGGTCCAGTGTAACTCAGAGGAAAGGCCACACACCATAGGAAGGGTACTCTGGTGGCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 90 bp | CAGAGTACCCTTCCTATGGTGTGTGGCCTTTCCTCTGAGTTACACTaGACCCAGGCTGGTATCCTTCAAGACTGCCCAGGGAAGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: QSTLPMVCGLSSELH*TQAGILQDCPGKRE Trigger: TTCTCTCTTCCCTGGGCAGTCTTGAAGGATACCAGCCTGGGTCCAGTGTAACTCAGAGGAAAGGCCACACACCATAGGAAGGGTACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 90 bp | GATGTGGACTTTTGGCCCTTAGCTAGCAGCATACAGCAACAGCAGTaGCTGAGGGATGTAGAGTGTTGTCAGCCTGGATGGAGAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: DVDFWPLASSIQQQQ*LRDVECCQPGWRAI Trigger: GATGGCTCTCCATCCAGGCTGACAACACTCTACATCCCTCAGTCACTGCTGTTGCTGTATGCTGCTAGCTAAGGGCCAAAAGTCCACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 90 bp | ACTGCCACAATGGGGACACAGCTTCCATATTTAAACCCTAGCACTTaGGCAAATAAATTGAGGGGCCTGCTGCCACCATCTTGGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: TATMGTQLPYLNPST*ANKLRGLLPPSWFL Trigger: GAGGAACCAAGATGGTGGCAGCAGGCCCCTCAATTTATTTGCTCAAGTGCTAGGGTTTAAATATGGAAGCTGTGTCCCCATTGTGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 90 bp | TTCTTCTTCATGCTCATCTCTGGTGACACCTTGAAGAAGGTGTCATaGAAGAGGGTACAATATCGGGAAGCCATGGGGGAAGGACTTGCT | + |
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Preference number: 1 (lower is better) Translates to: FFFMLISGDTLKKVS*KRVQYREAMGEGLA Trigger: AGCAAGTCCTTCCCCCATGGCTTCCCGATATTGTACCCTCTTCCATGACACCTTCTTCAAGGTGTCACCAGAGATGAGCATGAAGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 90 bp | TGGAATTCAGAGACCACTAGGGAAGAAAGCCCTGTTTATTTATGCTaGGTTCTACCAGGCCCTCAGGCTCACAATCTCATACAACCCTAC | + |
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Preference number: 1 (lower is better) Translates to: WNSETTREESPVYLC*VLPGPQAHNLIQPY Trigger: GTAGGGTTGTATGAGATTGTGAGCCTGAGGGCCTGGTAGAACGCAGCATAAATAAACAGGGCTTTCTTCCCTAGTGGTCTCTGAATTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 90 bp | ATCCTCCTGCCCAAAATGCTGCAATTCCAGATGTATACCACAGTGTaGACTCTGCACTGGTCTTGCTCTTATTCTAACAACTGTGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: ILLPKMLQFQMYTTV*TLHWSCSYSNNCAW Trigger: CCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGGTATACATCTGGAATTGCAGCATTTTGGGCAGGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 90 bp | GGAGGTTCAGGAAAATATCACCTTCTTCTTCATGCTCATCTCTGGTaGCACCTTGAAGAAGGTGTCATGGAAGAGGGTACAATATCGGGA | + |
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Preference number: 1 (lower is better) Translates to: GGSGKYHLLLHAHLW*HLEEGVMEEGTISG Trigger: TCCCGATATTGTACCCTCTTCCATGACACCTTCTTCAAGGTGTCACCAGAGATGAGCATGAAGAAGAAGGTGATATTTTCCTGAACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 90 bp | CTGCAATTCCAGATGTATACCACAGTGTGGACTCTGCACTGGTCTTaGTCTTATTCTAACAACTGTGCTTGGTATGGTGGTTCATCTGCA | + |
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Preference number: 1 (lower is better) Translates to: LQFQMYTTVWTLHWS*SYSNNCAWYGGSSA Trigger: TGCAGATGAACCACCATACCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGGTATACATCTGGAATTGCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 90 bp | TGCCCAAAATGCTGCAATTCCAGATGTATACCACAGTGTGGACTCTaGACTGGTCTTGCTCTTATTCTAACAACTGTGCTTGGTATGGTG | + |
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Preference number: 1 (lower is better) Translates to: CPKCCNSRCIPQCGL*TGLALILTTVLGMV Trigger: CACCATACCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGGTATACATCTGGAATTGCAGCATTTTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 90 bp | GAAACATGTCTGGTGGTGACTCATGGTTTGACTTCCACAGTCCACTaGAATTCAGAGACCACTAGGGAAGAAAGCCCTGTTTATTTATGC | + |
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Preference number: 1 (lower is better) Translates to: ETCLVVTHGLTSTVH*NSETTREESPVYLC Trigger: GCATAAATAAACAGGGCTTTCTTCCCTAGTGGTCTCTGAATTCCAGTGGACTGTGGAAGTCAAACCATGAGTCACCACCAGACATGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 90 bp | GACCTCATCTCAAAAACTAAAGTAAACCAAAGCTTTAGTTACTTGTaGCTGCCAGAGCTCACTGTGCAAGGCCAACACAAATCCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: DLISKTKVNQSFSYL*LPELTVQGQHKSFL Trigger: CAGGAAGGATTTGTGTTGGCCTTGCACAGTGAGCTCTGGCAGGCACAAGTAACTAAAGCTTTGGTTTACTTTAGTTTTTGAGATGAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR GCA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTTTCATCACGAGGCAGTaGCTATGCAAGCCAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: TPKGLITSHWAPPLKGFPFITRQ*LCKPGL Trigger: CAGTCCTGGCTTGCATAGGCACTGCCTCGTGATGAA...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACGCCTCAACTGAAGACTaGTCTCTGTGTGTCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PKGPHHLPLGPTSQRLPYASTED*SLCVCG Trigger: CCCACAGACACACAGAGACCAGTCTTCAGTTGAGGC...GTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACTCCTCTGAGTTACACTaGACCCAGGCTGGTATCCTT | + |
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Preference number: 2 (lower is better) Translates to: PKGPHHLPLGPTSQRLPYSSELH*TQAGIL Trigger: AAGGATACCAGCCTGGGTCCAGTGTAACTCAGAGGA...GTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACTTCCACAGTCCACTaGAATTCAGAGACCACTAGG | + |
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Preference number: 2 (lower is better) Translates to: TPKGLITSHWAPPLKGFPTSTVH*NSETTR Trigger: CCTAGTGGTCTCTGAATTCCAGTGGACTGTGGAAGT...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR TCA 90 bp | TACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCAAGGAGAAGATGATGTaGATGGCCAAGTTAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: YPKGPHHLPLGPTSQRLPKEKMM*MAKLGL Trigger: TAGACCTAACTTGGCCATTCACATCATCTTCTCCTT...GGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACGACTTCCCTCCAAGATaGATTGGAGGATATGATCTA | + |
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Preference number: 2 (lower is better) Translates to: PKGPHHLPLGPTSQRLPYDFPPR*IGGYDL Trigger: TAGATCATATCCTCCAATCCATCTTGGAGGGAAGTC...GTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR TCA 90 bp | CCACAGTGTGGACTCTGCACTGGTCTTGCTCTTATTCTAACAACTGTGCTTGGTGTGTGGCCTTTCCTCTaGGTTACACTGGACCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PQCGLCTGLALILTTVLGVWPFL*VTLDPG Trigger: GCCTGGGTCCAGTGTAACTCAGAGGAAAGGCCACAC...ACCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR TCA 90 bp | GAGGTTCAGGAAAATATCACCTTCTTCTTCATGCTCATCTCTGGTGACACCTTGGAGCTCAGCCTGCCATaGCCAGGGGAAAGGACCCGT | + |
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Preference number: 2 (lower is better) Translates to: EVQENITFFFMLISGDTLELSLP*PGERTR Trigger: ACGGGTCCTTTCCCCTGGTCATGGCAGGCTGAGCTC...CAAGGTGTCACCAGAGATGAGCATGAAGAAGAAGGTGATATTTTCCTGAACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACTTTCCCATACTTTTCCATGTaGGTGTTGATGTGGACTTTT | + |
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Preference number: 2 (lower is better) Translates to: KGLITSHWAPPLKGFPTFPYFSM*VLMWTF Trigger: AAAAGTCCACATCAACACCCACATGGAAAAGTATGG...GAAAGTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR TCA 90 bp | TCATACAACCCTACAATCAGTCCTCCCCACTTCATAGTTGAGGTAAACAAGACTAGACGGTCACTCTTCTaGCCCTGGGCTGTGGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SYNPTISPPHFIVEVNKTRRSLF*PWAVGA Trigger: TGCACCCACAGCCCAGGGTCAGAAGAGTGACCGTCT...AGTCTTGTTTACCTCAACTATGAAGTGGGGAGGACTGATTGTAGGGTTGTATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR GCA 90 bp | CCACAGTGTGGACTCTGCACTGGTCTTGCTCTTATTCTAACAACTGTGCTTGGTTGCCAGAGCTCACTGTaGAAGGCCAACACAAATCCT | + |
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Preference number: 2 (lower is better) Translates to: PQCGLCTGLALILTTVLGCQSSL*KANTNP Trigger: AGGATTTGTGTTGGCCTTGCACAGTGAGCTCTGGCA...ACCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTGTGGACTCTGCACTGGTCTTGCTCTTATTCTAACAACTGTGCTTGGTCTGCTGCCACCATCTTaGTTCCTCGCAAGATTAAGA | + |
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Preference number: 2 (lower is better) Translates to: PQCGLCTGLALILTTVLGLLPPS*FLARLR Trigger: TCTTAATCTTGCGAGGAACCAAGATGGTGGCAGCAG...ACCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGTTCAGGAAAATATCACCTTCTTCTTCATGCTCATCTCTGGTGACACCTTGCTGTGCTTGGTATGGTaGTTCATCTGCAGCAACAGC | + |
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Preference number: 2 (lower is better) Translates to: EVQENITFFFMLISGDTLLCLVW*FICSNS Trigger: GCTGTTGCTGCAGATGAACCACCATACCAAGCACAG...CAAGGTGTCACCAGAGATGAGCATGAAGAAGAAGGTGATATTTTCCTGAACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CCA 90 bp | AAGCTAGAACACCATCCACGTATCAGTCCCATATTGTATTCTGCTCTAGAGTCCGCAAGAAAGAAAGGGTaGATATATCAGAAACATGTC | + |
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Preference number: 2 (lower is better) Translates to: KLEHHPRISPILYSALESARKKG*IYQKHV Trigger: GACATGTTTCTGATATATCCACCCTTTCTTTCTTGC...GGACTCTAGAGCAGAATACAATATGGGACTGATACGTGGATGGTGTTCTAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CAA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTGTGGTGACTCATGGTTaGACTTCCACAGTCCACTGG | + |
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Preference number: 3 (lower is better) Translates to: TPKGLITSHWAPPLKGFPVVTHG*TSTVHW Trigger: CCAGTGGACTGTGGAAGTCAAACCATGAGTCACCAC...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CAA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTTTTTCCATGTGGGTGTaGATGTGGACTTTTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: TPKGLITSHWAPPLKGFPFSMWV*MWTFGP Trigger: AGGGCCAAAAGTCCACATCAACACCCACATGGAAAA...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CAA 90 bp | CTGAAGATGATACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCACCTGCTGCCACCATCTaGGTTCCTCGCAAGATTAAG | + |
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Preference number: 3 (lower is better) Translates to: LKMIPQRASSPPTGPHLSPAATI*VPRKIK Trigger: CTTAATCTTGCGAGGAACCAAGATGGTGGCAGCAGG...TGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGTATCATCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 72 bp | CCAGAGTACCCTTCCTATGGTGTGTGGCCTTTCCTCTaGGTTACACTGGACCCAGGCTGGTATCCTTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: PEYPSYGVWPFL*VTLDPGWYPSR Trigger: TCTTGAAGGATACCAGCCTGGGTCCAGTGTAACTCAGAGGAAAGGCCACACACCATAGGAAGGGTACTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 72 bp | TTTTGGCCCTTAGCTAGCAGCATACAGCAACAGCAGTaGCTGAGGGATGTAGAGTGTTGTCAGCCTGGATGG | + |
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Preference number: 3 (lower is better) Translates to: FWPLASSIQQQQ*LRDVECCQPGW Trigger: CCATCCAGGCTGACAACACTCTACATCCCTCAGTCACTGCTGTTGCTGTATGCTGCTAGCTAAGGGCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 72 bp | GGCCCCACCTCTCAAAGGCTTCCCTACTTTCAACACTaGCACAATGGGGACACAGCTTCCATATTTAAACCC | + |
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Preference number: 3 (lower is better) Translates to: GPTSQRLPYFQH*HNGDTASIFKP Trigger: GGGTTTAAATATGGAAGCTGTGTCCCCATTGTGGCAGTGTTGAAAGTAGGGAAGCCTTTGAGAGGTGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 72 bp | CAATATCGGGAAGCCATGGGGGAAGGACTTGCTCTTTaGATAGGGTTTTGGCCTAGGTCAGTCTTGCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: QYREAMGEGLAL*IGFWPRSVLPR Trigger: TCTAGGCAAGACTGACCTAGGCCAAAACCCTATCCAAAGAGCAAGTCCTTCCCCCATGGCTTCCCGATATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 72 bp | AGCATTCTTTCATCGTCCCTGACACCAGGGCTGACTTaGGTTCCTGTTCTGACTTCCCTCCAAGATGGATTG | + |
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Preference number: 3 (lower is better) Translates to: SILSSSLTPGLT*VPVLTSLQDGL Trigger: CAATCCATCTTGGAGGGAAGTCAGAACAGGAACTCAAGTCAGCCCTGGTGTCAGGGACGATGAAAGAATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 72 bp | CCAAAGACGGTCACTCTTCTGACCCTGGGCTGTGGGTaGAACCACACTAAGAGATTCATCTCAAGTTCATCA | + |
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Preference number: 3 (lower is better) Translates to: PKTVTLLTLGCG*NHTKRFISSSS Trigger: TGATGAACTTGAGATGAATCTCTTAGTGTGGTTGCACCCACAGCCCAGGGTCAGAAGAGTGACCGTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 72 bp | TCAGAGACCACTAGGGAAGAAAGCCCTGTTTATTTATaGTGCGTTCTACCAGGCCCTCAGGCTCACAATCTC | + |
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Preference number: 3 (lower is better) Translates to: SETTREESPVYL*CVLPGPQAHNL Trigger: GAGATTGTGAGCCTGAGGGCCTGGTAGAACGCAGCATAAATAAACAGGGCTTTCTTCCCTAGTGGTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 72 bp | CTGGTGGTGACTCATGGTTTGACTTCCACAGTCCACTaGAATTCAGAGACCACTAGGGAAGAAAGCCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LVVTHGLTSTVH*NSETTREESPV Trigger: AACAGGGCTTTCTTCCCTAGTGGTCTCTGAATTCCAGTGGACTGTGGAAGTCAAACCATGAGTCACCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 72 bp | ATGCTCATCTCTGGTGACACCTTGAAGAAGGTGTCATaGAAGAGGGTACAATATCGGGAAGCCATGGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: MLISGDTLKKVS*KRVQYREAMGE Trigger: TTCCCCCATGGCTTCCCGATATTGTACCCTCTTCCATGACACCTTCTTCAAGGTGTCACCAGAGATGAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 72 bp | GAGACCACTAGGGAAGAAAGCCCTGTTTATTTATGCTaGGTTCTACCAGGCCCTCAGGCTCACAATCTCATA | + |
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Preference number: 3 (lower is better) Translates to: ETTREESPVYLC*VLPGPQAHNLI Trigger: TATGAGATTGTGAGCCTGAGGGCCTGGTAGAACGCAGCATAAATAAACAGGGCTTTCTTCCCTAGTGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 72 bp | AGAACACCATCCACGTATCAGTCCCATATTGTATTCTaGTCTAGAGTCCCTTGTCCTCAAGAGCTCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RTPSTYQSHIVF*SRVPCPQELSL Trigger: CAGGCTGAGCTCTTGAGGACAAGGGACTCTAGAGCAGAATACAATATGGGACTGATACGTGGATGGTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 72 bp | ATGGGGACACAGCTTCCATATTTAAACCCTAGCACTTaGGCAAATAAATTGAGGGGCCTGCTGCCACCATCT | + |
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Preference number: 3 (lower is better) Translates to: MGTQLPYLNPST*ANKLRGLLPPS Trigger: AGATGGTGGCAGCAGGCCCCTCAATTTATTTGCTCAAGTGCTAGGGTTTAAATATGGAAGCTGTGTCCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 72 bp | ACTCTAAACCACATACAAAGTCTGAGTAGAAGCCACTaGTTATCCCACCCTGCCATTCTTCAGCCTACCACA | + |
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Preference number: 3 (lower is better) Translates to: TLNHIQSLSRSH*LSHPAILQPTT Trigger: TGTGGTAGGCTGAAGAATGGCAGGGTGGGATAACCAGTGGCTTCTACTCAGACTTTGTATGTGGTTTAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 72 bp | ACAGCAGTGACTGAGGGATGTAGAGTGTTGTCAGCCTaGATGGAGAGCCATCCATCTAGTAACTACTTTATC | + |
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Preference number: 3 (lower is better) Translates to: TAVTEGCRVLSA*MESHPSSNYFI Trigger: GATAAAGTAGTTACTAGATGGATGGCTCTCCATCCAGGCTGACAACACTCTACATCCCTCAGTCACTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CAA 90 bp | AAATTGAGGGGCCTGCTGCCACCATCTTGGTTCCTCGCAAGATTAAGAGTAGATATGGCGAGGACAGAGTaGAATTGTTTAACTCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: KLRGLLPPSWFLARLRVDMARTE*NCLTPK Trigger: CTTTGGAGTTAAACAATTCAACTCTGTCCTCGCCAT...ATCTACTCTTAATCTTGCGAGGAACCAAGATGGTGGCAGCAGGCCCCTCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR-3UTR CAA 90 bp | AAATTGAGGGGCCTGCTGCCACCATCTTGGTTCCTCGCAAGATTAAGAGTAGATGTTAGATTTGTCAACTaGACAAAGCCTACAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: KLRGLLPPSWFLARLRVDVRFVN*TKPTVL Trigger: CAGGACTGTAGGCTTTGTCAAGTTGACAAATCTAAC...ATCTACTCTTAATCTTGCGAGGAACCAAGATGGTGGCAGCAGGCCCCTCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 72 bp | GGTGGATATATCAGAAACATGTCTGGTGGTGACTCATaGTTTGACTTCCACAGTCCACTGGAATTCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GGYIRNMSGGDS*FDFHSPLEFRD Trigger: GTCTCTGAATTCCAGTGGACTGTGGAAGTCAAACCATGAGTCACCACCAGACATGTTTCTGATATATCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR TCA 72 bp | GGAAAATATCACCTTCTTCTTCATGCTCATCTCTGGTaGCACCTTGAAGAAGGTGTCATGGAAGAGGGTACA | + |
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Preference number: 3 (lower is better) Translates to: GKYHLLLHAHLW*HLEEGVMEEGT Trigger: TGTACCCTCTTCCATGACACCTTCTTCAAGGTGTCACCAGAGATGAGCATGAAGAAGAAGGTGATATTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR GCA 72 bp | TGCTGCAATTCCAGATGTATACCACAGTGTGGACTCTaGACTGGTCTTGCTCTTATTCTAACAACTGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: CCNSRCIPQCGL*TGLALILTTVL Trigger: AAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGGTATACATCTGGAATTGCAGCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| 3UTR CCA 72 bp | CCCAAAATGCTGCAATTCCAGATGTATACCACAGTGTaGACTCTGCACTGGTCTTGCTCTTATTCTAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PKMLQFQMYTTV*TLHWSCSYSNN Trigger: GTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGGTATACATCTGGAATTGCAGCATTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CCA 72 bp | CTACCAAGTGTTGGGGTTCACATGTGTGAGGCACCATaGCATGTTTATTATTCTAAGACAGGGTTTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSVGVHMCEAP*HVYYSKTGFHC Trigger: ACAGTGAAACCCTGTCTTAGAATAATAAACATGCCATGGTGCCTCACACATGTGAACCCCAACACTTGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCAAGAAAGAAAGGGTGGATATATCAGAAACATGTCTGGTGGTGACTCATGGTGAGGACAGAGTTGAATaGTTTAACTCCAAAGACGGT | + |
|
Preference number: 3 (lower is better) Translates to: CKKERVDISETCLVVTHGEDRVE*FNSKDG Trigger: ACCGTCTTTGGAGTTAAACAATTCAACTCTGTCCTC...ACCATGAGTCACCACCAGACATGTTTCTGATATATCCACCCTTTCTTTCTTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR-3UTR CAA 90 bp | AAAACTAAAGTAAACCAAAGCTTTAGTTACTTGTGCCTGCCAGAGCTCACTGTGCGTATCAGTCCCATATaGTATTCTGCTCTAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KTKVNQSFSYLCLPELTVRISPI*YSALES Trigger: GGACTCTAGAGCAGAATACAATATGGGACTGATACG...CACAGTGAGCTCTGGCAGGCACAAGTAACTAAAGCTTTGGTTTACTTTAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | CTGAAGATGATACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCACAGACAGAGAGGCCGTaGGGCGGTCCAGCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKMIPQRASSPPTGPHLSQTERP*GGPASL Trigger: AAGGCTGGCTGGACCGCCGCACGGCCTCTCTGTCTG...TGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGTATCATCTTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTCAGTTCGCAAGCTCATaGGGCCTCCGTAGAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPKGLITSHWAPPLKGFPQFASS*GLRRAP Trigger: TGGGGCTCTACGGAGGCCCCATGAGCTTGCGAACTG...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTGTGCCTGCTGGGCTTTaGCAATCCACTCTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPKGLITSHWAPPLKGFPVPAGL*QSTLCP Trigger: TGGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCAC...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTGGGCATTATGAGACATaGTCAGGGCATCTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPKGLITSHWAPPLKGFPGHYET*SGHLSA Trigger: GGCTGAGAGATGCCCTGACCATGTCTCATAATGCCC...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CCA 90 bp | GTTCATCTGCAGCAACAGCTACTCAGAAGGCTGAGCTGGCAAGGGCAACACAGGCAGCCTGGTGCCTGCTaGGCTTTGCCAATCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VHLQQQLLRRLSWQGQHRQPGAC*ALPIHS Trigger: AGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGCTG...CCTGTGTTGCCCTTGCCAGCTCAGCCTTCTGAGTAGCTGTTGCTGCAGATGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR TCA 90 bp | AAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACTTTCTGGGAAGAGGTGAAATaGGATTTGAACCCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLITSHWAPPLKGFPTFWEEVK*DLNPKQ Trigger: CTGTTTGGGGTTCAAATCTCATTTCACCTCTTCCCA...GAAAGTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | AAATTGAGGGGCCTGCTGCCACCATCTTGGTTCCTCGCAAGATTAAGAGTAGATTCTCAGCCTGGTGCCTaGTGGGCTTTGCCAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLRGLLPPSWFLARLRVDSQPGA*WALPIH Trigger: GTGGATTGGCAAAGCCCAGCAGGCACCAGGCTGAGA...ATCTACTCTTAATCTTGCGAGGAACCAAGATGGTGGCAGCAGGCCCCTCAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR TCA 90 bp | TCCATACTTTTCCATGTGGGTGTTGATGTGGACTTTTGGCCCTTAGCTAGCAGCAAGAGGCTCCACAGATaGGGGGAAAGAGGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SILFHVGVDVDFWPLASSKRLHR*GERGAG Trigger: ACCAGCTCCTCTTTCCCCTCATCTGTGGAGCCTCTT...GCTGCTAGCTAAGGGCCAAAAGTCCACATCAACACCCACATGGAAAAGTATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | GATGTGAATGGCCAAGTTAGGTCTAGCTCTGTGATCACAAGTCTCCTCACCTTGCATCTCTCAGCCTGGTaGCTGCTGGGCTTTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DVNGQVRSSSVITSLLTLHLSAW*LLGFAN Trigger: ATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATG...CAAGGTGAGGAGACTTGTGATCACAGAGCTAGACCTAACTTGGCCATTCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CCA 90 bp | GAGGTTCAGGAAAATATCACCTTCTTCTTCATGCTCATCTCTGGTGACACCTTGGGCCACCCAGGAAGATaGCAGGGATTCCCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EVQENITFFFMLISGDTLGHPGR*QGFPPQ Trigger: CTGTGGTGGGAATCCCTGCCATCTTCCTGGGTGGCC...CAAGGTGTCACCAGAGATGAGCATGAAGAAGAAGGTGATATTTTCCTGAACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CCA 90 bp | TGCAAGAAAGAAAGGGTGGATATATCAGAAACATGTCTGGTGGTGACTCATGGTGGGCATCTCTCAGCCTaGTGCCTGCTGGGCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CKKERVDISETCLVVTHGGHLSA*CLLGFA Trigger: GGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGCCC...ACCATGAGTCACCACCAGACATGTTTCTGATATATCCACCCTTTCTTTCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACTTTCGACAATGTTTCCACTTaGTGTATACAGCTTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGLITSHWAPPLKGFPTFDNVST*CIQLFS Trigger: GGAGAAAAGCTGTATACACCAAGTGGAAACATTGTC...GAAAGTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CCA 90 bp | AATTTCCAAGGAGAAGATGATGTGAATGGCCAAGTTAGGTCTAGCTCTGTGATCCCCAGCAGGCAACCGTaGGAATCCAGCACTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFQGEDDVNGQVRSSSVIPSRQP*ESSTHR Trigger: CCTGTGAGTGCTGGATTCCCACGGTTGCCTGCTGGG...GATCACAGAGCTAGACCTAACTTGGCCATTCACATCATCTTCTCCTTGGAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CAA 72 bp | CAGCATTCTTTCATCGTCCCTGACACCAGGGCTGACTaGAGTTCCTGTTCTGACTTCCCTCCAAGATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QHSFIVPDTRAD*SSCSDFPPRWI Trigger: AATCCATCTTGGAGGGAAGTCAGAACAGGAACTCAAGTCAGCCCTGGTGTCAGGGACGATGAAAGAATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CAA 72 bp | CATACAGCAACAGCAGTGACTGAGGGATGTAGAGTGTaGTCAGCCTGGATGGAGAGCCATCCATCTAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTATAVTEGCRV*SAWMESHPSSN Trigger: GTTACTAGATGGATGGCTCTCCATCCAGGCTGACAACACTCTACATCCCTCAGTCACTGCTGTTGCTGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR TCA 90 bp | AAATTGAGGGGCCTGCTGCCACCATCTTGGTTCCTCGCAAGATTAAGAGTAGATCCAGCACTCACAGGCTaGAAAGTGAAGGCGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLRGLLPPSWFLARLRVDPALTG*KVKAVK Trigger: TTTTACCGCCTTCACTTTTCAGCCTGTGAGTGCTGG...ATCTACTCTTAATCTTGCGAGGAACCAAGATGGTGGCAGCAGGCCCCTCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | GAACACCATCCACGTATCAGTCCCATATTGTATTCTGCTCTAGAGTCCCTTGTCTCTCTGTATAAAGGCTaGAGCCCTCCACAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: EHHPRISPILYSALESLVSLYKG*SPPQRT Trigger: GGTCCTCTGTGGAGGGCTGCAGCCTTTATACAGAGA...GACAAGGGACTCTAGAGCAGAATACAATATGGGACTGATACGTGGATGGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | TGTGGGTGCAACCACACTAAGAGATTCATCTCAAGTTCATCACGAGGCAGTGCCTGCCAATCCACTCTTTaGCCATGTATGATCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGCNHTKRFISSSSRGSACQSTL*PCMITE Trigger: CTCTGTGATCATACATGGGCAAAGAGTGGATTGGCA...GGCACTGCCTCGTGATGAACTTGAGATGAATCTCTTAGTGTGGTTGCACCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGAACACCATCCACGTATCAGTCCCATATTGTATTCTGCTCTAGAGTCCGTCTGCCCAAAAGACTaGGTAGGGCTAAGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLEHHPRISPILYSALESVCPKD*VGLSFL Trigger: CAGGAAACTTAGCCCTACGCAGTCTTTTGGGCAGAC...GGACTCTAGAGCAGAATACAATATGGGACTGATACGTGGATGGTGTTCTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | AAGCTAGAACACCATCCACGTATCAGTCCCATATTGTATTCTGCTCTAGAGTCCGCTTTTCTCCTTGTCTaGCCAAAAGACTGCGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLEHHPRISPILYSALESAFLLV*PKDCVG Trigger: CCCTACGCAGTCTTTTGGGCAGACAAGGAGAAAAGC...GGACTCTAGAGCAGAATACAATATGGGACTGATACGTGGATGGTGTTCTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CAA 72 bp | CAGCCAGAGTCTATTCATGGCGAGGACAGAGTTGAATaGTTTAACTCCAAAGACGGTCACTCTTCTGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPESIHGEDRVE*FNSKDGHSSDP Trigger: AGGGTCAGAAGAGTGACCGTCTTTGGAGTTAAACAATTCAACTCTGTCCTCGCCATGAATAGACTCTGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CAA 72 bp | ACGCTCAGCCAGAGTCTATTCATGGCGAGGACAGAGTaGAATTGTTTAACTCCAAAGACGGTCACTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLSQSLFMARTE*NCLTPKTVTLL Trigger: CAGAAGAGTGACCGTCTTTGGAGTTAAACAATTCAACTCTGTCCTCGCCATGAATAGACTCTGGCTGAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR TCA 90 bp | CCACAGTGTGGACTCTGCACTGGTCTTGCTCTTATTCTAACAACTGTGCTTGGTCTCTTTGCCCATGTATaGTCACAGAGTGTTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PQCGLCTGLALILTTVLGLFAHV*SQSVQC Trigger: ACATTGAACACTCTGTGATCATACATGGGCAAAGAG...ACCAAGCACAGTTGTTAGAATAAGAGCAAGACCAGTGCAGAGTCCACACTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CAA 72 bp | AGAAAGCTAGAACACCATCCACGTATCAGTCCCATATaGTATTCTGCTCTAGAGTCCCTTGTCCTCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLEHHPRISPI*YSALESLVLKS Trigger: GCTCTTGAGGACAAGGGACTCTAGAGCAGAATACAATATGGGACTGATACGTGGATGGTGTTCTAGCTTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CAA 72 bp | GATATATCAGAAACATGTCTGGTGGTGACTCATGGTTaGACTTCCACAGTCCACTGGAATTCAGAGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: DISETCLVVTHG*TSTVHWNSETT Trigger: AGTGGTCTCTGAATTCCAGTGGACTGTGGAAGTCAAACCATGAGTCACCACCAGACATGTTTCTGATATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| 3UTR CAA 72 bp | CTACTTTATCCATCTGTCCTGGTTAGATTTGTCAACTaGACAAAGCCTACAGTCCTGAGAAGGGAAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLYPSVLVRFVN*TKPTVLRRESL Trigger: GAGGCTTTCCCTTCTCAGGACTGTAGGCTTTGTCAAGTTGACAAATCTAACCAGGACAGATGGATAAAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR GCA 90 bp | TCATACAACCCTACAATCAGTCCTCCCCACTTCATAGTTGAGGTAAACAAGACTATAGCCTACCACTATTaGCACCAAGTTAAAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYNPTISPPHFIVEVNKTIAYHY*HQVKGS Trigger: ACTGCCTTTAACTTGGTGGCAATAGTGGTAGGCTAT...AGTCTTGTTTACCTCAACTATGAAGTGGGGAGGACTGATTGTAGGGTTGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CAA 90 bp | CCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACGGTGCCTGCTGGGCTTaGCCAATCCACTCTTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKGPHHLPLGPTSQRLPYGACWA*PIHSLP Trigger: GGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACC...GTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CAA 90 bp | ACCCCAAAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTAGCCCCAGGGCATGCTaGGCACCCACACTTATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPKGLITSHWAPPLKGFPSPRAC*APTLIA Trigger: GGCAATAAGTGTGGGTGCCAAGCATGCCCTGGGGCT...AGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTTTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS CCA 90 bp | CAGTTCGCAAGCTCATGGGGCCTCCGTAGAGCCCCAGGGCATGCTTaGCACCCACACTTATTGCCCATGTTCCTGCTAGGCAAGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QFASSWGLRRAPGHA*HPHLLPMFLLGKLG Trigger: CCCCAGCTTGCCTAGCAGGAACATGGGCAATAAGTGTGGGTGCCAAGCATGCCCTGGGGCTCTACGGAGGCCCCATGAGCTTGCGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCTCATCACCTCCCACTGGGCCCCACCTCTCAAAGGCTTCCCTACTTTCTGGCACCCACACTTATaGCCCATGTTCCTGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGLITSHWAPPLKGFPTFWHPHL*PMFLLG Trigger: GCCTAGCAGGAACATGGGCAATAAGTGTGGGTGCCA...GAAAGTAGGGAAGCCTTTGAGAGGTGGGGCCCAGTGGGAGGTGATGAGGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGGCCTTTCCTCTGAGTTACACTGGACCCAGGCTGGTATCCTTCAAGACGGAAAGAGGAGCTGGTaGGCCCTGAGGCCAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: VCGLSSELHWTQAGILQDGKRSW*ALRPVL Trigger: CAGTACTGGCCTCAGGGCCAACCAGCTCCTCTTTCC...GTCTTGAAGGATACCAGCCTGGGTCCAGTGTAACTCAGAGGAAAGGCCACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS TCA 90 bp | TCCAGGTATACCACCTCCTTGGCCAAGGCAAACTTCTGGGCATTATaGGACATGGTCAGGGCATCTCTCAGCCTGGTGCCTGCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRYTTSLAKANFWAL*DMVRASLSLVPAGL Trigger: AAGCCCAGCAGGCACCAGGCTGAGAGATGCCCTGACCATGTCTCATAATGCCCAGAAGTTTGCCTTGGCCAAGGAGGTGGTATACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS TCA 90 bp | ACAGAGAGGCCGTGCGGCGGTCCAGCCAGCCTTCCAGGGCAAGAGTaGGAGAGTCTTTGGAAAAGGTATAGGCTACATAGCCTACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: TERPCGGPASLPGQE*ESLWKRYRLHSLPL Trigger: TAGTGGTAGGCTATGTAGCCTATACCTTTTCCAAAGACTCTCTCACTCTTGCCCTGGAAGGCTGGCTGGACCGCCGCACGGCCTCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS CCA 90 bp | GGGTCTGTAGGGCAGCCACACCACTCTCCAGGTATACCACCTCCTTaGCCAAGGCAAACTTCTGGGCATTATGAGACATGGTCAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSVGQPHHSPGIPPP*PRQTSGHYETWSGH Trigger: ATGCCCTGACCATGTCTCATAATGCCCAGAAGTTTGCCTTGGCCAAGGAGGTGGTATACCTGGAGAGTGGTGTGGCTGCCCTACAGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS TCA 90 bp | GCCTGGTGCCTGCTGGGCTTTGCCAATCCACTCTTTGCCCATGTATaGTCACAGAGTGTTCAATGTTGGTCACAGGGCCACCCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AWCLLGFANPLFAHV*SQSVQCWSQGHPGR Trigger: TCTTCCTGGGTGGCCCTGTGACCAACATTGAACACTCTGTGATCATACATGGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS CCA 90 bp | GAGCTGGTTGGCCCTGAGGCCAGTACTGGTAGAGCCACTGGACTATaGGATCTGGGAAGAGGTGAAATGAGATTTGAACCCCAAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ELVGPEASTGRATGL*DLGRGEMRFEPQTG Trigger: GCCTGTTTGGGGTTCAAATCTCATTTCACCTCTTCCCAGATCCCATAGTCCAGTGGCTCTACCAGTACTGGCCTCAGGGCCAACCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS CCA 90 bp | ATACCACCTCCTTGGCCAAGGCAAACTTCTGGGCATTATGAGACATaGTCAGGGCATCTCTCAGCCTGGTGCCTGCTGGGCTTTGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: IPPPWPRQTSGHYET*SGHLSAWCLLGFAN Trigger: ATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGCCCTGACCATGTCTCATAATGCCCAGAAGTTTGCCTTGGCCAAGGAGGTGGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS GCA 90 bp | GCATCTCTCAGCCTGGTGCCTGCTGGGCTTTGCCAATCCACTCTTTaGCCATGTATGATCACAGAGTGTTCAATGTTGGTCACAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLSLVPAGLCQSTL*PCMITECSMLVTGP Trigger: TGGCCCTGTGACCAACATTGAACACTCTGTGATCATACATGGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS GCA 90 bp | CTGGGCATTATGAGACATGGTCAGGGCATCTCTCAGCCTGGTGCCTaGTGGGCTTTGCCAATCCACTCTTTGCCCATGTATGATCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGIMRHGQGISQPGA*WALPIHSLPMYDHR Trigger: TCTGTGATCATACATGGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGCCCTGACCATGTCTCATAATGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS TCA 90 bp | ACATCTGTTGTAGAGAGTCCCGGCGGGTGGTGTAGGGCAAATGGTTaGTGCGAAACCAGTGTCTGGGGACAATGTTTCCACTTGGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TSVVESPGGWCRANG*CETSVWGQCFHLVY Trigger: ATACACCAAGTGGAAACATTGTCCCCAGACACTGGTTTCGCATCAACCATTTGCCCTACACCACCCGCCGGGACTCTCTACAACAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CAA 90 bp | AAATTGAGGGGCCTGCTGCCACCATCTTGGTTCCTCGCAAGATTAAGAGTAGATACAGAGTGTTCAATGTaGGTCACAGGGCCACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLRGLLPPSWFLARLRVDTECSM*VTGPPR Trigger: CCTGGGTGGCCCTGTGACCAACATTGAACACTCTGT...ATCTACTCTTAATCTTGCGAGGAACCAAGATGGTGGCAGCAGGCCCCTCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS GCA 90 bp | GAGAGAGTCTTTGGAAAAGGTATAGGCTACATAGCCTACCACTATTaGCACCAAGTTAAAGGCAGTTCGCAAGCTCATGGGGCCTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: ERVFGKGIGYIAYHY*HQVKGSSQAHGASV Trigger: TACGGAGGCCCCATGAGCTTGCGAACTGCCTTTAACTTGGTGGCAATAGTGGTAGGCTATGTAGCCTATACCTTTTCCAAAGACTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
||
| CDS-3UTR CAA 90 bp | GAACACCATCCACGTATCAGTCCCATATTGTATTCTGCTCTAGAGTCCCTTGTCAGGTATACCACCTCCTaGGCCAAGGCAAACTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: EHHPRISPILYSALESLVRYTTS*AKANFW Trigger: CCAGAAGTTTGCCTTGGCCAAGGAGGTGGTATACCT...GACAAGGGACTCTAGAGCAGAATACAATATGGGACTGATACGTGGATGGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS-3UTR CAA 90 bp | TGTGGGTGCAACCACACTAAGAGATTCATCTCAAGTTCATCACGAGGCAGTGCCGGACAATGTTTCCACTaGGTGTATACAGCTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: CGCNHTKRFISSSSRGSAGQCFH*VYTAFL Trigger: GAGAAAAGCTGTATACACCAAGTGGAAACATTGTCC...GGCACTGCCTCGTGATGAACTTGAGATGAATCTCTTAGTGTGGTTGCACCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS GCA 90 bp | TTCCACTTGGTGTATACAGCTTTTCTCCTTGTCTGCCCAAAAGACTaGGTAGGGCTAAGTTTCCTGACAGAATCTTCTCATAGAATTCCA | + |
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Preference number: 5 (lower is better) Translates to: FHLVYTAFLLVCPKD*VGLSFLTESSHRIP Trigger: TGGAATTCTATGAGAAGATTCTGTCAGGAAACTTAGCCCTACGCAGTCTTTTGGGCAGACAAGGAGAAAAGCTGTATACACCAAGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS CCA 72 bp | CCTTGGCCAAGGCAAACTTCTGGGCATTATGAGACATaGTCAGGGCATCTCTCAGCCTGGTGCCTGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PWPRQTSGHYET*SGHLSAWCLLG Trigger: GCCCAGCAGGCACCAGGCTGAGAGATGCCCTGACCATGTCTCATAATGCCCAGAAGTTTGCCTTGGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS TCA 72 bp | CCGTGCGGCGGTCCAGCCAGCCTTCCAGGGCAAGAGTaGGAGAGTCTTTGGAAAAGGTATAGGCTACATAGC | + |
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Preference number: 6 (lower is better) Translates to: PCGGPASLPGQE*ESLWKRYRLHS Trigger: GCTATGTAGCCTATACCTTTTCCAAAGACTCTCTCACTCTTGCCCTGGAAGGCTGGCTGGACCGCCGCACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS CCA 72 bp | GGGCATTATGAGACATGGTCAGGGCATCTCTCAGCCTaGTGCCTGCTGGGCTTTGCCAATCCACTCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: GHYETWSGHLSA*CLLGFANPLFA Trigger: GGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGCCCTGACCATGTCTCATAATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS TCA 72 bp | GTAGAGAGTCCCGGCGGGTGGTGTAGGGCAAATGGTTaGTGCGAAACCAGTGTCTGGGGACAATGTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VESPGGWCRANG*CETSVWGQCFH Trigger: GTGGAAACATTGTCCCCAGACACTGGTTTCGCATCAACCATTTGCCCTACACCACCCGCCGGGACTCTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS CCA 72 bp | GGGCAGCCACACCACTCTCCAGGTATACCACCTCCTTaGCCAAGGCAAACTTCTGGGCATTATGAGACATGG | + |
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Preference number: 6 (lower is better) Translates to: GQPHHSPGIPPP*PRQTSGHYETW Trigger: CCATGTCTCATAATGCCCAGAAGTTTGCCTTGGCCAAGGAGGTGGTATACCTGGAGAGTGGTGTGGCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS CAA 90 bp | GGCATCTCTCAGCCTGGTGCCTGCTGGGCTTTGCCAATCCACTCTTaGCCCATGTATGATCACAGAGTGTTCAATGTTGGTCACAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GISQPGACWALPIHS*PMYDHRVFNVGHRA Trigger: GGCCCTGTGACCAACATTGAACACTCTGTGATCATACATGGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS GCA 72 bp | CATTATGAGACATGGTCAGGGCATCTCTCAGCCTGGTaGCTGCTGGGCTTTGCCAATCCACTCTTTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: HYETWSGHLSAW*LLGFANPLFAH Trigger: ATGGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGCCCTGACCATGTCTCATAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS CAA 90 bp | TGCCAATCCACTCTTTGCCCATGTATGATCACAGAGTGTTCAATGTaGGTCACAGGGCCACCCAGGAAGATGGCAGGGATTCCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: CQSTLCPCMITECSM*VTGPPRKMAGIPTT Trigger: TGTGGTGGGAATCCCTGCCATCTTCCTGGGTGGCCCTGTGACCAACATTGAACACTCTGTGATCATACATGGGCAAAGAGTGGATTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS CAA 90 bp | ATGAGACATGGTCAGGGCATCTCTCAGCCTGGTGCCTGCTGGGCTTaGCCAATCCACTCTTTGCCCATGTATGATCACAGAGTGTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: MRHGQGISQPGACWA*PIHSLPMYDHRVFN Trigger: ATTGAACACTCTGTGATCATACATGGGCAAAGAGTGGATTGGCAAAGCCCAGCAGGCACCAGGCTGAGAGATGCCCTGACCATGTCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS TCA 72 bp | CTGCTGGGCTTTGCCAATCCACTCTTTGCCCATGTATaGTCACAGAGTGTTCAATGTTGGTCACAGGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLGFANPLFAHV*SQSVQCWSQGH Trigger: GTGGCCCTGTGACCAACATTGAACACTCTGTGATCATACATGGGCAAAGAGTGGATTGGCAAAGCCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS CAA 72 bp | ACTCTTTGCCCATGTATGATCACAGAGTGTTCAATGTaGGTCACAGGGCCACCCAGGAAGATGGCAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: TLCPCMITECSM*VTGPPRKMAGI Trigger: AATCCCTGCCATCTTCCTGGGTGGCCCTGTGACCAACATTGAACACTCTGTGATCATACATGGGCAAAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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| CDS GCA 72 bp | GTGTATACAGCTTTTCTCCTTGTCTGCCCAAAAGACTaGGTAGGGCTAAGTTTCCTGACAGAATCTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VYTAFLLVCPKD*VGLSFLTESSH Trigger: ATGAGAAGATTCTGTCAGGAAACTTAGCCCTACGCAGTCTTTTGGGCAGACAAGGAGAAAAGCTGTATACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037906.6 |
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