Pregenerated sensors for TMEM176B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029810Ensembl transcript IDs: ENSMUST00000101429.11, ENSMUST00000164733.4, ENSMUST00000166247.8, ENSMUST00000203229.3, ENSMUST00000203265.3, ENSMUST00000203355.3, ENSMUST00000203501.2, ENSMUST00000204073.3, ENSMUST00000204783.3, ENSMUST00000205147.3, ENSMUST00000205159.3
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TTCAAGTTGTTTCTCCTTTATCGGCATTGGATAAAATaGCATAATATCTGTTCGTGGAAGAAAGGACATTGG | + |
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Preference number: 3 (lower is better) Translates to: FKLFLLYRHWIK*HNICSWKKGHW Trigger: CCAATGTCCTTTCTTCCACGAACAGATATTATGTCATTTTATCCAATGCCGATAAAGGAGAAACAACTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 |
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| CDS-3UTR GCA 90 bp | GTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCCCTGGCCGGGGACGCAGGTaGTGGATGCCCATCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VGVCCGARRGPGNSRVLPGRGRR*WMPIKK Trigger: CTTCTTGATGGGCATCCAGCACCTGCGTCCCCGGCC...AGGGAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | GAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCGGCCGGGGACGCAGGTaGTGGATGCCCATCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: EVGVCCGARRGPGNSRVLGRGRR*WMPIKK Trigger: CTTCTTGATGGGCATCCAGCACCTGCGTCCCCGGCC...GAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | GGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCCCTGGACGGGGACGCAGGTGCTaGATGCCCATCAAGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GVCCGARRGPGNSRVLPGRGRRC*MPIKKL Trigger: AAGCTTCTTGATGGGCATCCAGCACCTGCGTCCCCG...TCCAGGGAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | AGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAAGGCCGGGGACGCAGGTaGTGGATGCCCATCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGYIRSRCVLRGQKRPWEGRGRR*WMPIKK Trigger: CTTCTTGATGGGCATCCAGCACCTGCGTCCCCGGCC...TTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | TCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCGCCCATAGTGGATTCTaGCCTGAGGCCAGGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SEVGVCCGARRGPGNSRVAHSGF*PEARRE Trigger: TTCTCTCCTGGCCTCAGGCCAGAATCCACTATGGGC...GACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | GTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACCGGGGACGCAGGTGCTaGATGCCCATCAAGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VATSEVGVCCGARRGPGNRGRRC*MPIKKL Trigger: AAGCTTCTTGATGGGCATCCAGCACCTGCGTCCCCG...GTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | ATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCGGGGACGCAGGTGCTaGATGCCCATCAAGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: IRSRCVLRGQKRPWEQSRRGRRC*MPIKKL Trigger: AAGCTTCTTGATGGGCATCCAGCACCTGCGTCCCCG...ACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | GTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCCCTAAGAAGCTTCCTCTCTaGCTCTTCTTCATTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VGVCCGARRGPGNSRVLPKKLPL*LFFIQG Trigger: GCCCTGAATGAAGAAGAGTCAGAGAGGAAGCTTCTT...AGGGAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | GAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCACAGCTCCCAGCAGCTaGTCCAAAGCAGATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVGVCCGARRGPGNSRVLTAPSS*SKADFW Trigger: CCAAAAATCTGCTTTGGAGCAGCTGCTGGGAGCTGT...GAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | AGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACGGGGACGCAGGTGCTaGATGCCCATCAAGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SGYIRSRCVLRGQKRPWERGRRC*MPIKKL Trigger: AAGCTTCTTGATGGGCATCCAGCACCTGCGTCCCCG...TTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | GGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCCCTGGATCCAAAGCAGATTTTTaGTGGATGTGGATGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: GVCCGARRGPGNSRVLPGSKADF*WMWMLM Trigger: CATCAGCATCCACATCCACCAAAAATCTGCTTTGGA...TCCAGGGAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | GCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTGCCCATAGTGGATTCTaGCCTGAGGCCAGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATSEVGVCCGARRGPGNSAHSGF*PEARRE Trigger: TTCTCTCCTGGCCTCAGGCCAGAATCCACTATGGGC...ACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | TCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCTGTTCAGGTACTCTCTaGACCTCTCTGTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SEVGVCCGARRGPGNSRVCSGTL*TSLSSS Trigger: ACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAACA...GACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | TCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCGCAAGGGGTTGCATGTaGAAAAGATCTCGACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SEVGVCCGARRGPGNSRVARGCM*KRSRRS Trigger: ACTACGTCGAGATCTTTTCCACATGCAACCCCTTGC...GACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | GTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACGAACACTGGTTTGCCTaGTTAAGCTGTTCACACCCA | + |
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Preference number: 4 (lower is better) Translates to: VATSEVGVCCGARRGPGNEHWFA*LSCSHP Trigger: TGGGTGTGAACAGCTTAATCAGGCAAACCAGTGTTC...GTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | ATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTGAACACTGGTTTGCCTaGTTAAGCTGTTCACACCCA | + |
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Preference number: 4 (lower is better) Translates to: IRSRCVLRGQKRPWEQSREHWFA*LSCSHP Trigger: TGGGTGTGAACAGCTTAATCAGGCAAACCAGTGTTC...ACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | GTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAAGAAGCTTCCTCTCTaGCTCTTCTTCATTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VATSEVGVCCGARRGPGNKKLPL*LFFIQG Trigger: GCCCTGAATGAAGAAGAGTCAGAGAGGAAGCTTCTT...GTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | AGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAAACAGCTCCCAGCAGCTaGTCCAAAGCAGATTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGYIRSRCVLRGQKRPWETAPSS*SKADFW Trigger: CCAAAAATCTGCTTTGGAGCAGCTGCTGGGAGCTGT...TTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | GCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTACAGCTCCCAGCAGCTaGTCCAAAGCAGATTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ATSEVGVCCGARRGPGNSTAPSS*SKADFW Trigger: CCAAAAATCTGCTTTGGAGCAGCTGCTGGGAGCTGT...ACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | ATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTTGTTCAGGTACTCTCTaGACCTCTCTGTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: IRSRCVLRGQKRPWEQSRCSGTL*TSLSSS Trigger: ACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAACA...ACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTGTGGGCCGGGGACGCAGGTaGTGGATGCCCATCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ERGRERGLNSGYIRSRCVGRGRR*WMPIKK Trigger: CTTCTTGATGGGCATCCAGCACCTGCGTCCCCGGCC...CACACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | TACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGGAACACTGGTTTGCCTaGTTAAGCTGTTCACACCCA | + |
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Preference number: 4 (lower is better) Translates to: YIRSRCVLRGQKRPWEQSEHWFA*LSCSHP Trigger: TGGGTGTGAACAGCTTAATCAGGCAAACCAGTGTTC...CGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | CGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCCCTGGATTACTATGGACTTGATTGCAAGGGGTTaGATGTGGAAAAGATCTCGA | + |
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Preference number: 4 (lower is better) Translates to: RGQKRPWEQSRPPWITMDLIARG*MWKRSR Trigger: TCGAGATCTTTTCCACATGCAACCCCTTGCAATCAA...GTCCATAGTAATCCAGGGAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | TCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCTCCAAAGCAGATTTTTaGTGGATGTGGATGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: SEVGVCCGARRGPGNSRVSKADF*WMWMLM Trigger: CATCAGCATCCACATCCACCAAAAATCTGCTTTGGA...GACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | AGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAAGCAAGGGGTTGCATGTaGAAAAGATCTCGACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SGYIRSRCVLRGQKRPWEARGCM*KRSRRS Trigger: ACTACGTCGAGATCTTTTCCACATGCAACCCCTTGC...TTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | GGGCTGAATAGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGAAGAAGCTTCCTCTCTaGCTCTTCTTCATTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GLNSGYIRSRCVLRGQKRKKLPL*LFFIQG Trigger: GCCCTGAATGAAGAAGAGTCAGAGAGGAAGCTTCTT...CCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACTATTCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | TACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGTCCAAAGCAGATTTTTaGTGGATGTGGATGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: YIRSRCVLRGQKRPWEQSSKADF*WMWMLM Trigger: CATCAGCATCCACATCCACCAAAAATCTGCTTTGGA...CGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | GGGGAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTACAGCTCCCAGCAGCTaGTCCAAAGCAGATTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GERGRERGLNSGYIRSRCTAPSS*SKADFW Trigger: CCAAAAATCTGCTTTGGAGCAGCTGCTGGGAGCTGT...ACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | GGGGAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTGAACACTGGTTTGCCTaGTTAAGCTGTTCACACCCA | + |
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Preference number: 4 (lower is better) Translates to: GERGRERGLNSGYIRSRCEHWFA*LSCSHP Trigger: TGGGTGTGAACAGCTTAATCAGGCAAACCAGTGTTC...ACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR TCA 90 bp | GGGGAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTCTCTGTCTTCCAGTCTaGATCATCACTGTATCGCAC | + |
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Preference number: 4 (lower is better) Translates to: GERGRERGLNSGYIRSRCLCLPV*IITVSH Trigger: GTGCGATACAGTGATGATTCAGACTGGAAGACAGAG...ACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | GGGGAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTTGTTCAGGTACTCTCTaGACCTCTCTGTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GERGRERGLNSGYIRSRCCSGTL*TSLSSS Trigger: ACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAACA...ACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CCA 90 bp | GAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTGTGGCAAGGGGTTGCATGTaGAAAAGATCTCGACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ERGRERGLNSGYIRSRCVARGCM*KRSRRS Trigger: ACTACGTCGAGATCTTTTCCACATGCAACCCCTTGC...CACACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR GCA 90 bp | GACATAATATCTGTTCGTGGAAGAAAGGACATTGGCGTGAGGACAGTGGGGAGATGTTCAGGTACTCTCTaGACCTCTCTGTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DIISVRGRKDIGVRTVGRCSGTL*TSLSSS Trigger: ACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAACA...TCTCCCCACTGTCCTCACGCCAATGTCCTTTCTTCCACGAACAGATATTATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 |
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| CDS-3UTR CAA 90 bp | GTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCCCTGCAGGGATCTTCTCTTaGGCCGGGGACGCAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: VGVCCGARRGPGNSRVLPAGIFS*AGDAGA Trigger: AGCACCTGCGTCCCCGGCCAAAGAGAAGATCCCTGC...AGGGAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | CGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCCCTGGATTACTATGGACGCAGGGATCTTCTCTTaGGCCGGGGACGCAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: RGQKRPWEQSRPPWITMDAGIFS*AGDAGA Trigger: AGCACCTGCGTCCCCGGCCAAAGAGAAGATCCCTGC...GTCCATAGTAATCCAGGGAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | GCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTGCAGGGATCTTCTCTTaGGCCGGGGACGCAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: ATSEVGVCCGARRGPGNSAGIFS*AGDAGA Trigger: AGCACCTGCGTCCCCGGCCAAAGAGAAGATCCCTGC...ACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | CTGAATAGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCGCAGGGATCTTCTCTTaGGCCGGGGACGCAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LNSGYIRSRCVLRGQKRPAGIFS*AGDAGA Trigger: AGCACCTGCGTCCCCGGCCAAAGAGAAGATCCCTGC...GGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACTATTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS TCA 90 bp | GGCCGGGGACGCAGGTGCTGGATGCCCATCAAGAAGCTTCCTCTCTaGCTCTTCTTCATTCAGGGCCTGGGAGCTCCGGCCATACATACT | + |
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Preference number: 5 (lower is better) Translates to: GRGRRCWMPIKKLPL*LFFIQGLGAPAIHT Trigger: AGTATGTATGGCCGGAGCTCCCAGGCCCTGAATGAAGAAGAGTCAGAGAGGAAGCTTCTTGATGGGCATCCAGCACCTGCGTCCCCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 ENSMUST00000204073.3 |
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| CDS-3UTR CAA 90 bp | GAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCCTCTGTGTGGAGGCCACTTaGACTCCATTCACAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: EVGVCCGARRGPGNSRVLCVEAT*TPFTVT Trigger: AGTGACTGTGAATGGAGTCAAAGTGGCCTCCACACA...GAGGACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | GTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACCAACTCCAGCTAGAATaGCCACAGACCCCGACCAGA | + |
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Preference number: 5 (lower is better) Translates to: VATSEVGVCCGARRGPGNQLQLE*PQTPTR Trigger: TCTGGTCGGGGTCTGTGGCAATTCTAGCTGGAGTTG...GTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | TACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCAACTCCAGCTAGAATaGCCACAGACCCCGACCAGA | + |
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Preference number: 5 (lower is better) Translates to: YIRSRCVLRGQKRPWEQSQLQLE*PQTPTR Trigger: TCTGGTCGGGGTCTGTGGCAATTCTAGCTGGAGTTG...CGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS CCA 90 bp | GCAATATCTGGGTCACCCCTAGAGACAGCTGCCCATAGTGGATTCTaGCCTGAGGCCAGGAGAGAAACTTCTTCAGGGAGCCCACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: AISGSPLETAAHSGF*PEARRETSSGSPQL Trigger: GAGCTGTGGGCTCCCTGAAGAAGTTTCTCTCCTGGCCTCAGGCCAGAATCCACTATGGGCAGCTGTCTCTAGGGGTGACCCAGATATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS TCA 90 bp | GGTAGCAGCTGCAGCTGTGGCAATGCAAGCCAGGAGGAGGAGACATaGTACCTGGCCGGACAGTTTTCCCTGCCTCTTCTCATGGACAAT | + |
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Preference number: 5 (lower is better) Translates to: GSSCSCGNASQEEET*YLAGQFSLPLLMDN Trigger: ATTGTCCATGAGAAGAGGCAGGGAAAACTGTCCGGCCAGGTATCATGTCTCCTCCTCCTGGCTTGCATTGCCACAGCTGCAGCTGCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS GCA 90 bp | AGGATAGCAGGGATCTTCTCTTTGGCCGGGGACGCAGGTGCTGGATaGCCATCAAGAAGCTTCCTCTCTGACTCTTCTTCATTCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RIAGIFSLAGDAGAG*PSRSFLSDSSSFRA Trigger: GGCCCTGAATGAAGAAGAGTCAGAGAGGAAGCTTCTTGATGGGCATCCAGCACCTGCGTCCCCGGCCAAAGAGAAGATCCCTGCTATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 ENSMUST00000204073.3 |
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| CDS-3UTR CAA 90 bp | AGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAATGTGTGGAGGCCACTTaGACTCCATTCACAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: SGYIRSRCVLRGQKRPWECVEAT*TPFTVT Trigger: AGTGACTGTGAATGGAGTCAAAGTGGCCTCCACACA...TTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS CCA 90 bp | GCTGCAGCTGTGGCAATGCAAGCCAGGAGGAGGAGACATGATACCTaGCCGGACAGTTTTCCCTGCCTCTTCTCATGGACAATAGTACCA | + |
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Preference number: 5 (lower is better) Translates to: AAAVAMQARRRRHDT*PDSFPCLFSWTIVP Trigger: TGGTACTATTGTCCATGAGAAGAGGCAGGGAAAACTGTCCGGCCAGGTATCATGTCTCCTCCTCCTGGCTTGCATTGCCACAGCTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS-3UTR CAA 90 bp | CTGAATAGTGGCTACATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGTGTGGAGGCCACTTaGACTCCATTCACAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: LNSGYIRSRCVLRGQKRPCVEAT*TPFTVT Trigger: AGTGACTGTGAATGGAGTCAAAGTGGCCTCCACACA...GGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGATGTAGCCACTATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | ATCAGAAGTAGGTGTGTGCTGCGGGGCCAGAAGAGGCCCTGGGAACAGTCGCGTCTCCAAAGCAGATTTTaGGTGGATGTGGATGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: IRSRCVLRGQKRPWEQSRLQSRF*VDVDAD Trigger: ATCAGCATCCACATCCACCAAAAATCTGCTTTGGAG...ACGCGACTGTTCCCAGGGCCTCTTCTGGCCCCGCAGCACACACCTACTTCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS TCA 90 bp | AGCAGCTGCTCCAAAGCAGATTTTTGGTGGATGTGGATGCTGATGTaGGCGGACTGGGGATGTGTGGAGGCCACTTTGACTCCATTCACA | + |
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Preference number: 5 (lower is better) Translates to: SSCSKADFWWMWMLM*ADWGCVEATLTPFT Trigger: TGTGAATGGAGTCAAAGTGGCCTCCACACATCCCCAGTCCGCTCACATCAGCATCCACATCCACCAAAAATCTGCTTTGGAGCAGCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS GCA 90 bp | CAAGCCAGGAGGAGGAGACATGATACCTGGCCGGACAGTTTTCCCTaGCTCTTCTCATGGACAATAGTACCAACTCCAGCTAGAATTGCC | + |
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Preference number: 5 (lower is better) Translates to: QARRRRHDTWPDSFP*LFSWTIVPTPARIA Trigger: GGCAATTCTAGCTGGAGTTGGTACTATTGTCCATGAGAAGAGGCAGGGAAAACTGTCCGGCCAGGTATCATGTCTCCTCCTCCTGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS-3UTR CAA 90 bp | GAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTGTGCAACTCCAGCTAGAATaGCCACAGACCCCGACCAGA | + |
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Preference number: 5 (lower is better) Translates to: ERGRERGLNSGYIRSRCVQLQLE*PQTPTR Trigger: TCTGGTCGGGGTCTGTGGCAATTCTAGCTGGAGTTG...CACACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | GGGGAGAGAGGGAGAGAAAGAGGGCTGAATAGTGGCTACATCAGAAGTAGGTGTTGTGTGGAGGCCACTTaGACTCCATTCACAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: GERGRERGLNSGYIRSRCCVEAT*TPFTVT Trigger: AGTGACTGTGAATGGAGTCAAAGTGGCCTCCACACA...ACACCTACTTCTGATGTAGCCACTATTCAGCCCTCTTTCTCTCCCTCTCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 |
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| CDS-3UTR CAA 90 bp | GACATAATATCTGTTCGTGGAAGAAAGGACATTGGCGTGAGGACAGTGGGGAGACAACTCCAGCTAGAATaGCCACAGACCCCGACCAGA | + |
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Preference number: 5 (lower is better) Translates to: DIISVRGRKDIGVRTVGRQLQLE*PQTPTR Trigger: TCTGGTCGGGGTCTGTGGCAATTCTAGCTGGAGTTG...TCTCCCCACTGTCCTCACGCCAATGTCCTTTCTTCCACGAACAGATATTATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 |
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| CDS TCA 90 bp | CATCATCATGTTCAGGTACTCTCTGCACCTCTCTGTCTTCCAGTCTaGATCATCACTGTATCGCACTGTCCCATACCCAGGGTCCATGCT | + |
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Preference number: 5 (lower is better) Translates to: HHHVQVLSAPLCLPV*IITVSHCPIPRVHA Trigger: AGCATGGACCCTGGGTATGGGACAGTGCGATACAGTGATGATTCAGACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAACATGATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203355.3 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS GCA 90 bp | TGCAGAACGCTAGGAACAAGTTCATCATCATGTTCAGGTACTCTCTaGACCTCTCTGTCTTCCAGTCTGAATCATCACTGTATCGCACTG | + |
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Preference number: 5 (lower is better) Translates to: CRTLGTSSSSCSGTL*TSLSSSLNHHCIAL Trigger: CAGTGCGATACAGTGATGATTCAGACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAACATGATGATGAACTTGTTCCTAGCGTTCTGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 ENSMUST00000204073.3 ENSMUST00000204783.3 |
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| CDS TCA 72 bp | CGCAGGTGCTGGATGCCCATCAAGAAGCTTCCTCTCTaGCTCTTCTTCATTCAGGGCCTGGGAGCTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRCWMPIKKLPL*LFFIQGLGAPA Trigger: GGCCGGAGCTCCCAGGCCCTGAATGAAGAAGAGTCAGAGAGGAAGCTTCTTGATGGGCATCCAGCACCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 ENSMUST00000204073.3 |
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| CDS CCA 72 bp | GGGTCACCCCTAGAGACAGCTGCCCATAGTGGATTCTaGCCTGAGGCCAGGAGAGAAACTTCTTCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GSPLETAAHSGF*PEARRETSSGS Trigger: GCTCCCTGAAGAAGTTTCTCTCCTGGCCTCAGGCCAGAATCCACTATGGGCAGCTGTCTCTAGGGGTGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS TCA 72 bp | TGCAGCTGTGGCAATGCAAGCCAGGAGGAGGAGACATaGTACCTGGCCGGACAGTTTTCCCTGCCTCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CSCGNASQEEET*YLAGQFSLPLL Trigger: GAGAAGAGGCAGGGAAAACTGTCCGGCCAGGTATCATGTCTCCTCCTCCTGGCTTGCATTGCCACAGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS CCA 72 bp | GTGGCAATGCAAGCCAGGAGGAGGAGACATGATACCTaGCCGGACAGTTTTCCCTGCCTCTTCTCATGGACA | + |
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Preference number: 6 (lower is better) Translates to: VAMQARRRRHDT*PDSFPCLFSWT Trigger: TGTCCATGAGAAGAGGCAGGGAAAACTGTCCGGCCAGGTATCATGTCTCCTCCTCCTGGCTTGCATTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS TCA 72 bp | GCTGCTCCAAAGCAGATTTTTGGTGGATGTGGATGCTaGTGTGAGCGGACTGGGGATGTGTGGAGGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: AAPKQIFGGCGC*CERTGDVWRPL Trigger: AAGTGGCCTCCACACATCCCCAGTCCGCTCACATCAGCATCCACATCCACCAAAAATCTGCTTTGGAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS TCA 72 bp | ACTGTATCGCACTGTCCCATACCCAGGGTCCATGCTTaGTTGCAAGGGGTTGCATGTGGAAAAGATCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: TVSHCPIPRVHA*LQGVACGKDLD Trigger: GTCGAGATCTTTTCCACATGCAACCCCTTGCAATCAAGCATGGACCCTGGGTATGGGACAGTGCGATACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS TCA 72 bp | GTTCAGGTACTCTCTGCACCTCTCTGTCTTCCAGTCTaGATCATCACTGTATCGCACTGTCCCATACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VQVLSAPLCLPV*IITVSHCPIPR Trigger: CCTGGGTATGGGACAGTGCGATACAGTGATGATTCAGACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000204073.3 ENSMUST00000204783.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS CAA 72 bp | CACTGTATCGCACTGTCCCATACCCAGGGTCCATGCTaGATTGCAAGGGGTTGCATGTGGAAAAGATCTCGA | + |
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Preference number: 6 (lower is better) Translates to: HCIALSHTQGPC*IARGCMWKRSR Trigger: TCGAGATCTTTTCCACATGCAACCCCTTGCAATCAAGCATGGACCCTGGGTATGGGACAGTGCGATACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS GCA 72 bp | CATCACTGTATCGCACTGTCCCATACCCAGGGTCCATaGTTGATTGCAAGGGGTTGCATGTGGAAAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: HHCIALSHTQGP*LIARGCMWKRS Trigger: AGATCTTTTCCACATGCAACCCCTTGCAATCAAGCATGGACCCTGGGTATGGGACAGTGCGATACAGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS CCA 72 bp | ACCCAGGGTCCATGCTTGATTGCAAGGGGTTGCATGTaGAAAAGATCTCGACGTAGTAGGGAACACTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: TQGPCLIARGCM*KRSRRSREHWF Trigger: AAACCAGTGTTCCCTACTACGTCGAGATCTTTTCCACATGCAACCCCTTGCAATCAAGCATGGACCCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203229.3 ENSMUST00000203265.3 ENSMUST00000203355.3 ENSMUST00000203501.2 ENSMUST00000204073.3 ENSMUST00000205147.3 ENSMUST00000205159.3 |
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| CDS GCA 72 bp | CTAGGAACAAGTTCATCATCATGTTCAGGTACTCTCTaGACCTCTCTGTCTTCCAGTCTGAATCATCACTGT | + |
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Preference number: 6 (lower is better) Translates to: LGTSSSSCSGTL*TSLSSSLNHHC Trigger: ACAGTGATGATTCAGACTGGAAGACAGAGAGGTGCAGAGAGTACCTGAACATGATGATGAACTTGTTCCTAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000101429.11 ENSMUST00000164733.4 ENSMUST00000166247.8 ENSMUST00000203355.3 ENSMUST00000204073.3 ENSMUST00000204783.3 |
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