Pregenerated sensors for TMEM176A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023367Ensembl transcript IDs: ENSMUST00000101426.11, ENSMUST00000168406.4, ENSMUST00000203639.3, ENSMUST00000204309.2, ENSMUST00000204400.2, ENSMUST00000204482.3
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGCCATGGCCCTGCTAGTGGGGGAGGGTCTTCTTAGTCCTGCCTaGTTCTTCTTTCAGGCTTCAGTAGGAGGGACGCCCGGAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: VAMALLVGEGLLSPA*FFFQASVGGTPGAR Trigger: TCTTGCTCCGGGCGTCCCTCCTACTGAAGCCTGAAAGAAGAATCAGGCAGGACTAAGAAGACCCTCCCCCACTAGCAGGGCCATGGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR TCA 90 bp | GTCCTCACGCTGCTCTGCCTCCCAGACAGTGTGAATTCCCTGGTGTaGCAAAGCAAGGACCTGCCAGCAATAACAGGAGAGTTTATTATC | + |
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Preference number: 1 (lower is better) Translates to: VLTLLCLPDSVNSLV*QSKDLPAITGEFII Trigger: GATAATAAACTCTCCTGTTATTGCTGGCAGGTCCTTGCTTTGTCACACCAGGGAATTCACACTGTCTGGGAGGCAGAGCAGCGTGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| 3UTR TCA 90 bp | GAGAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTaGAGGATGGAGAGACAAGCAAGTGCTGCTGAGAGCTGCTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: ESLLSSCCLRRDIGR*RMERQASAAESCCG Trigger: ACCACAGCAGCTCTCAGCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR CCA 90 bp | GACAGCAAAGATGTAGGACAGGAAACCAGAGAACATCCTGAAGTCTaGTTAGGTCGCCTGCATTATGCAGGCAATCTGTACAAGCATGCA | + |
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Preference number: 1 (lower is better) Translates to: DSKDVGQETREHPEV*LGRLHYAGNLYKHA Trigger: TGCATGCTTGTACAGATTGCCTGCATAATGCAGGCGACCTAACCAGACTTCAGGATGTTCTCTGGTTTCCTGTCCTACATCTTTGCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR GCA 90 bp | TGGGTGGGTTTGGATGCACAGGCACAAAATTCTGCAGTATGTGACTaGCTAGCTTATGCAAGCAAAGGGATTTTGAGAGAATGCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: WVGLDAQAQNSAVCD*LAYASKGILRECLL Trigger: AAGCAGGCATTCTCTCAAAATCCCTTTGCTTGCATAAGCTAGGCAGTCACATACTGCAGAATTTTGTGCCTGTGCATCCAAACCCACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR GCA 90 bp | AGTCTGGTTAGGTCGCCTGCATTATGCAGGCAATCTGTACAAGCATaGAAGACAGAAATGAGAAATACCAATTTCCCCTTTGAAAGTAAC | + |
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Preference number: 1 (lower is better) Translates to: SLVRSPALCRQSVQA*KTEMRNTNFPFESN Trigger: GTTACTTTCAAAGGGGAAATTGGTATTTCTCATTTCTGTCTTGCATGCTTGTACAGATTGCCTGCATAATGCAGGCGACCTAACCAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR CCA 90 bp | ATACTCAGAAGGCTGAGACAGAAGGATCATGAGTTCAGGTTTAGATaGTGCTACATAGCAAGTCTCCATCCTCAACATAAATCAATGAGA | + |
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Preference number: 1 (lower is better) Translates to: ILRRLRQKDHEFRFR*CYIASLHPQHKSMR Trigger: TCTCATTGATTTATGTTGAGGATGGAGACTTGCTATGTAGCACCATCTAAACCTGAACTCATGATCCTTCTGTCTCAGCCTTCTGAGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR TCA 90 bp | GAGATGGGAAGCAGAGGTGAAGAGGTCGAAGTAGCCTTTTGGTTTTaGAATTTAACTTTGTCTATTTGGCAACTGTTCACTCTAATGCAT | + |
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Preference number: 1 (lower is better) Translates to: EMGSRGEEVEVAFWF*NLTLSIWQLFTLMH Trigger: ATGCATTAGAGTGAACAGTTGCCAAATAGACAAAGTTAAATTTCAAAACCAAAAGGCTACTTCGACCTCTTCACCTCTGCTTCCCATCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGTCCCTTTCCCCCTCACCCTGAACACCCGGTCATCTGTTTGCAGGTTGAGTGCTGCTGAGAGCTaGTGTGGTGCTGGGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GTVPFPLTLNTRSSVCRLSAAES*CGAGQN Trigger: GTTCTGCCCAGCACCACAGCAGCTCTCAGCAGCACT...CAACCTGCAAACAGATGACCGGGTGTTCAGGGTGAGGGGGAAAGGGACTGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR-3UTR TCA 90 bp | GCATCAGAGGCTTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGTGTGAATTCAGGGATATAGGACGGTaGAGGATGGAGAGACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ASEACCPHAALPPRQCEFRDIGR*RMERQA Trigger: TGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCT...GAATTCACACTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAAGCCTCTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| 3UTR-3UTR CCA 90 bp | AGGATCTTGGAAATTTTGGTTCTCTTCTTTCCTCCCCCGTTGTGGTGGTGCTGTGAGCTGCTGTGGTGCTaGGCAGAACCAGGCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RILEILVLFFPPPLWWCCELLWC*AEPGSG Trigger: GCCACTGCCTGGTTCTGCCCAGCACCACAGCAGCTC...ACAGCACCACCACAACGGGGGAGGAAAGAAGAGAACCAAAATTTCCAAGATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR TCA 90 bp | CTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGCTTCTTAGTCCTGCCTaGTTCTTCTTTCAGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LWEASEACCPHAALPPRQLLSPA*FFFQAS Trigger: TGAAGCCTGAAAGAAGAATCAGGCAGGACTAAGAAG...CTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTGTGACAAAGCAAGGACCTGCCAGCAATAACAGGAGAGTTTATTATCAAGAGCTGCTGTGGTGCTaGGCAGAACCAGGCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: PGVTKQGPASNNRRVYYQELLWC*AEPGSG Trigger: GCCACTGCCTGGTTCTGCCCAGCACCACAGCAGCTC...TTGATAATAAACTCTCCTGTTATTGCTGGCAGGTCCTTGCTTTGTCACACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| 3UTR-3UTR CCA 90 bp | GCAATAACAGGAGAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGAGCTGCTGTGGTGCTaGGCAGAACCAGGCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: AITGEFIIKLLPEEGYRTELLWC*AEPGSG Trigger: GCCACTGCCTGGTTCTGCCCAGCACCACAGCAGCTC...CGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCCTTCTTAGTCCTGCCTaGTTCTTCTTTCAGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LPEEGYRTVKDGETSKCCLLSPA*FFFQAS Trigger: TGAAGCCTGAAAGAAGAATCAGGCAGGACTAAGAAG...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAAGTGCTGCTGAGAGCTaGTGTGGTGCTGGGCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGSAAES*CGAGQN Trigger: GTTCTGCCCAGCACCACAGCAGCTCTCAGCAGCACT...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR-3UTR GCA 90 bp | ACACCACCCTGTTCATCATGGAGGGCTTTGATTGTCTTCTCAGATTTTGGCTGCGGGATTTTGAGAGAATaGCTGCTTTCCCACTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: TPPCSSWRALIVFSDFGCGILRE*LLSHSG Trigger: CCCAGAGTGGGAAAGCAGGCATTCTCTCAAAATCCC...GCAGCCAAAATCTGAGAAGACAATCAAAGCCCTCCATGATGAACAGGGTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR CAA 90 bp | CAAAGCAAGGACCTGCCAGCAATAACAGGAGAGTTTATTATCAAGTaGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: QSKDLPAITGEFIIK*LPEEGYRTVKDGET Trigger: TGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGCTGGCAGGTCCTTGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| 3UTR-3UTR TCA 90 bp | AGGACGGTGAAACACATTTGTAATCCCAATACTCAGAAGGCTGAGACAGAAGGAGTGAATTCCCTGGTGTaGCAAAGCAAGGACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RTVKHICNPNTQKAETEGVNSLV*QSKDLP Trigger: TGGCAGGTCCTTGCTTTGTCACACCAGGGAATTCAC...TCCTTCTGTCTCAGCCTTCTGAGTATTGGGATTACAAATGTGTTTCACCGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR-3UTR TCA 90 bp | AGGACGGTGAAACACATTTGTAATCCCAATACTCAGAAGGCTGAGACAGAAGGAGCCTCCCAGACAGTGTaGATTCCCTGGTGTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: RTVKHICNPNTQKAETEGASQTV*IPWCDK Trigger: TTTGTCACACCAGGGAATTCACACTGTCTGGGAGGC...TCCTTCTGTCTCAGCCTTCTGAGTATTGGGATTACAAATGTGTTTCACCGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR-3UTR GCA 90 bp | TGGGTAGGATGTAGGAGCTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGAGTTTATTATCAAGTTaGTGCCTGAGGAGGGATATA | + |
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Preference number: 2 (lower is better) Translates to: WVGCRSYGKHQRLAVLTLSLLSS*CLRRDI Trigger: TATATCCCTCCTCAGGCAGCAACTTGATAATAAACT...CAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAGCTCCTACATCCTACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| 3UTR-3UTR CCA 90 bp | ACACCACCCTGTTCATCATGGAGGGCTTTGATTGTCTTCTCAGATTTTGGCTGCTTTTTGTTGACTGGGTaGGTTTGGATGCACAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: TPPCSSWRALIVFSDFGCFLLTG*VWMHRH Trigger: GTGCCTGTGCATCCAAACCCACCCAGTCAACAAAAA...GCAGCCAAAATCTGAGAAGACAATCAAAGCCCTCCATGATGAACAGGGTGGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR GCA 90 bp | TGCATTATGCAGGCAATCTGTACAAGCATGCAAGACAGAAATGAGAAATACCAAGAAGCATCAGAGGCTTaGTGTCCTCACGCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: CIMQAICTSMQDRNEKYQEASEA*CPHAAL Trigger: CAGAGCAGCGTGAGGACAGCAAGCCTCTGATGCTTC...TTGGTATTTCTCATTTCTGTCTTGCATGCTTGTACAGATTGCCTGCATAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTATGTGACTGCCTAGCTTATGCAAGCAAAGGGATTTTGAGAGAATGCCTGACCCGGTCATCTGTTTaGAGGTTGCAAGATTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: AVCDCLAYASKGILRECLTRSSV*RLQDSR Trigger: TCTAGAATCTTGCAACCTGCAAACAGATGACCGGGT...CAGGCATTCTCTCAAAATCCCTTTGCTTGCATAAGCTAGGCAGTCACATACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR TCA 90 bp | GTACAAGCATGCAAGACAGAAATGAGAAATACCAATTTCCCCTTTGAAAGTAACGTGAATTCCCTGGTGTaGCAAAGCAAGGACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VQACKTEMRNTNFPFESNVNSLV*QSKDLP Trigger: TGGCAGGTCCTTGCTTTGTCACACCAGGGAATTCAC...GTTACTTTCAAAGGGGAAATTGGTATTTCTCATTTCTGTCTTGCATGCTTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR TCA 90 bp | GTACAAGCATGCAAGACAGAAATGAGAAATACCAATTTCCCCTTTGAAAGTAACGATGGGAAGCAGAGGTaGAGAGGTCGAAGTAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: VQACKTEMRNTNFPFESNDGKQR*RGRSSL Trigger: AAGGCTACTTCGACCTCTTCACCTCTGCTTCCCATC...GTTACTTTCAAAGGGGAAATTGGTATTTCTCATTTCTGTCTTGCATGCTTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR GCA 90 bp | AGGATCTTGGAAATTTTGGTTCTCTTCTTTCCTCCCCCGTTGTGGTGGTGCTGTAGTTTATTATCAAGTTaGTGCCTGAGGAGGGATATA | + |
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Preference number: 2 (lower is better) Translates to: RILEILVLFFPPPLWWCCSLLSS*CLRRDI Trigger: TATATCCCTCCTCAGGCAGCAACTTGATAATAAACT...ACAGCACCACCACAACGGGGGAGGAAAGAAGAGAACCAAAATTTCCAAGATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR-3UTR CCA 90 bp | GTACAAGCATGCAAGACAGAAATGAGAAATACCAATTTCCCCTTTGAAAGTAACAGCCTTCTTTGCCCATaGTTGTCTTCTCCACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: VQACKTEMRNTNFPFESNSLLCP*LSSPLL Trigger: GAGAAGTGGAGAAGACAACCATGGGCAAAGAAGGCT...GTTACTTTCAAAGGGGAAATTGGTATTTCTCATTTCTGTCTTGCATGCTTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR CAA 90 bp | AGAGGTCGAAGTAGCCTTTTGGTTTTGAAATTTAACTTTGTCTATTaGGCAACTGTTCACTCTAATGCATCTTTGGCTTCTTGGCATCAA | + |
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Preference number: 2 (lower is better) Translates to: RGRSSLLVLKFNFVY*ATVHSNASLASWHQ Trigger: TTGATGCCAAGAAGCCAAAGATGCATTAGAGTGAACAGTTGCCAAATAGACAAAGTTAAATTTCAAAACCAAAAGGCTACTTCGACCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR TCA 72 bp | GCCCTGCTAGTGGGGGAGGGTCTTCTTAGTCCTGCCTaGTTCTTCTTTCAGGCTTCAGTAGGAGGGACGCCC | + |
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Preference number: 3 (lower is better) Translates to: ALLVGEGLLSPA*FFFQASVGGTP Trigger: GGGCGTCCCTCCTACTGAAGCCTGAAAGAAGAATCAGGCAGGACTAAGAAGACCCTCCCCCACTAGCAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR TCA 72 bp | TTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGTGTaGATTCCCTGGTGTGACAAAGCAAGGACCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLSSRCSASQTV*IPWCDKARTCQ Trigger: CTGGCAGGTCCTTGCTTTGTCACACCAGGGAATTCACACTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| 3UTR TCA 72 bp | CCAGAATTCAGGGGACAGTCCCTTTCCCCCTCACCCTaGACACCCGGTCATCTGTTTGCAGGTTGCAAGATT | + |
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Preference number: 3 (lower is better) Translates to: PEFRGQSLSPSP*TPGHLFAGCKI Trigger: AATCTTGCAACCTGCAAACAGATGACCGGGTGTTCAGGGTGAGGGGGAAAGGGACTGTCCCCTGAATTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGGGGACAGTCCCTTTCCCCCTCACCCTGAACACCCGGTCATCTGTTTGCGAGTTTATTATCAAGTaGCTGCCTGAGGAGGGATAT | + |
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Preference number: 3 (lower is better) Translates to: IQGTVPFPLTLNTRSSVCEFIIK*LPEEGY Trigger: ATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC...GCAAACAGATGACCGGGTGTTCAGGGTGAGGGGGAAAGGGACTGTCCCCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR TCA 72 bp | TTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTaGAGGATGGAGAGACAAGCAAGTGCTGCTGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LSSCCLRRDIGR*RMERQASAAES Trigger: GCTCTCAGCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR CCA 72 bp | TGTCTTCTCCACTTCTCCACACCACCCTGTTCATCATaGAGGGCTTTGATTGTCTTCTCAGATTTTGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: CLLHFSTPPCSS*RALIVFSDFGC Trigger: GCAGCCAAAATCTGAGAAGACAATCAAAGCCCTCCATGATGAACAGGGTGGTGTGGAGAAGTGGAGAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR CCA 72 bp | GATGTAGGACAGGAAACCAGAGAACATCCTGAAGTCTaGTTAGGTCGCCTGCATTATGCAGGCAATCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: DVGQETREHPEV*LGRLHYAGNLY Trigger: GTACAGATTGCCTGCATAATGCAGGCGACCTAACCAGACTTCAGGATGTTCTCTGGTTTCCTGTCCTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR TCA 72 bp | GGGTTTGGATGCACAGGCACAAAATTCTGCAGTATGTaGCTGCCTAGCTTATGCAAGCAAAGGGATTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: GFGCTGTKFCSM*LPSLCKQRDFE Trigger: CTCAAAATCCCTTTGCTTGCATAAGCTAGGCAGTCACATACTGCAGAATTTTGTGCCTGTGCATCCAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR GCA 72 bp | TTGGATGCACAGGCACAAAATTCTGCAGTATGTGACTaGCTAGCTTATGCAAGCAAAGGGATTTTGAGAGAA | + |
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Preference number: 3 (lower is better) Translates to: LDAQAQNSAVCD*LAYASKGILRE Trigger: TTCTCTCAAAATCCCTTTGCTTGCATAAGCTAGGCAGTCACATACTGCAGAATTTTGTGCCTGTGCATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR GCA 72 bp | AGGTCGCCTGCATTATGCAGGCAATCTGTACAAGCATaGAAGACAGAAATGAGAAATACCAATTTCCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: RSPALCRQSVQA*KTEMRNTNFPF Trigger: AAAGGGGAAATTGGTATTTCTCATTTCTGTCTTGCATGCTTGTACAGATTGCCTGCATAATGCAGGCGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR CCA 72 bp | AGGCTGAGACAGAAGGATCATGAGTTCAGGTTTAGATaGTGCTACATAGCAAGTCTCCATCCTCAACATAAA | + |
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Preference number: 3 (lower is better) Translates to: RLRQKDHEFRFR*CYIASLHPQHK Trigger: TTTATGTTGAGGATGGAGACTTGCTATGTAGCACCATCTAAACCTGAACTCATGATCCTTCTGTCTCAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR-3UTR CAA 90 bp | TGCATTATGCAGGCAATCTGTACAAGCATGCAAGACAGAAATGAGAAATACCAATCATCTGTTTGCAGGTaGCAAGATTCTAGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: CIMQAICTSMQDRNEKYQSSVCR*QDSRAG Trigger: CCCAGCTCTAGAATCTTGCAACCTGCAAACAGATGA...TTGGTATTTCTCATTTCTGTCTTGCATGCTTGTACAGATTGCCTGCATAATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| 3UTR GCA 72 bp | CTGAGACAGAAGGATCATGAGTTCAGGTTTAGATGGTaGTACATAGCAAGTCTCCATCCTCAACATAAATCA | + |
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Preference number: 3 (lower is better) Translates to: LRQKDHEFRFRW*YIASLHPQHKS Trigger: TGATTTATGTTGAGGATGGAGACTTGCTATGTAGCACCATCTAAACCTGAACTCATGATCCTTCTGTCTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| 3UTR-3UTR CAA 90 bp | CTAATGCATCTTTGGCTTCTTGGCATCAACATCATTCTCAAGTATAAAGCCTTCGAGTTTATTATCAAGTaGCTGCCTGAGGAGGGATAT | + |
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Preference number: 3 (lower is better) Translates to: LMHLWLLGINIILKYKAFEFIIK*LPEEGY Trigger: ATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC...GAAGGCTTTATACTTGAGAATGATGTTGATGCCAAGAAGCCAAAGATGCATTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | AACCAGGCAGTGGCCATGGCCCTGCTAGTGGGGGAGGGTCTTCTTAGTCCTGCCGCCCCCAGCACAGTCTaGACCACCCAGGAGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: NQAVAMALLVGEGLLSPAAPSTV*TTQEAT Trigger: GGTGGCCTCCTGGGTGGTGCAGACTGTGCTGGGGGC...GGCAGGACTAAGAAGACCCTCCCCCACTAGCAGGGCCATGGCCACTGCCTGGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | CTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGAGGCCACCAGCACTCTaGTGCTGCCCTGGCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LWEASEACCPHAALPPRQRPPAL*CCPGSG Trigger: CCCAGAGCCAGGGCAGCAGCAGAGTGCTGGTGGCCT...CTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | AACCAGGCAGTGGCCATGGCCCTGCTAGTGGGGGAGGGTCTTCTTAGTCCTGCCTGCCCTGGCTCTGGGTaGAAGCGGATGCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NQAVAMALLVGEGLLSPACPGSG*KRMLES Trigger: GGATTCCAGCATCCGCTTCCACCCAGAGCCAGGGCA...GGCAGGACTAAGAAGACCCTCCCCCACTAGCAGGGCCATGGCCACTGCCTGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCGCCCCCAGCACAGTCTaGACCACCCAGGAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCAPSTV*TTQEAT Trigger: GGTGGCCTCCTGGGTGGTGCAGACTGTGCTGGGGGC...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | AACCAGGCAGTGGCCATGGCCCTGCTAGTGGGGGAGGGTCTTCTTAGTCCTGCCAGCGGTGCAGAAACTTaGCAGCACAAGAAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQAVAMALLVGEGLLSPASGAET*QHKKGP Trigger: AGGACCCTTCTTGTGCTGGCAAGTTTCTGCACCGCT...GGCAGGACTAAGAAGACCCTCCCCCACTAGCAGGGCCATGGCCACTGCCTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | AACCAGGCAGTGGCCATGGCCCTGCTAGTGGGGGAGGGTCTTCTTAGTCCTGCCGCCAGAGCAGACTCCTaGTGGATGTGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NQAVAMALLVGEGLLSPAARADS*WMCTSM Trigger: CATTGATGTGCACATCCACCAGGAGTCTGCTCTGGC...GGCAGGACTAAGAAGACCCTCCCCCACTAGCAGGGCCATGGCCACTGCCTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCCTGCTGCCCTGGCTCTaGGTGGAAGCGGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCLLPWL*VEADAG Trigger: TCCAGCATCCGCTTCCACCCAGAGCCAGGGCAGCAG...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | GGGACAGTCCCTTTCCCCCTCACCCTGAACACCCGGTCATCTGTTTGCAGGTTGCCACCCCGTTTCTTGTaGAGGAAGGCAACAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVPFPLTLNTRSSVCRLPPRFL*RKATAP Trigger: TGGAGCTGTTGCCTTCCTTCACAAGAAACGGGGTGG...CAACCTGCAAACAGATGACCGGGTGTTCAGGGTGAGGGGGAAAGGGACTGTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
||
| CDS-3UTR GCA 90 bp | TTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCCCAGCACTCTGCTGCTaGCCTGGCTCTGGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPEEGYRTVKDGETSKCPALCC*PGSGWK Trigger: CTTCCACCCAGAGCCAGGGCAGCAGCAGAGTGCTGG...GCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | TGGGTAGGATGTAGGAGCTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGTGCCCTGGCTCTGGGTaGAAGCGGATGCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WVGCRSYGKHQRLAVLTLCPGSG*KRMLES Trigger: GGATTCCAGCATCCGCTTCCACCCAGAGCCAGGGCA...CAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAGCTCCTACATCCTACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | TTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCCTGCTGCCCTGGCTCTaGGTGGAAGCGGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPEEGYRTVKDGETSKCLLPWL*VEADAG Trigger: TCCAGCATCCGCTTCCACCCAGAGCCAGGGCAGCAG...GCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCACTCTGCTGCTGCCCTaGCTCTGGGTGGAAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCTLLLP*LWVEAD Trigger: ATCCGCTTCCACCCAGAGCCAGGGCAGCAGCAGAGT...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | CTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGAGCGGTGCAGAAACTTaGCAGCACAAGAAGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWEASEACCPHAALPPRQSGAET*QHKKGP Trigger: AGGACCCTTCTTGTGCTGGCAAGTTTCTGCACCGCT...CTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCCGGCCAGCAGAAGTTTaGCCAGAGCAGACTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCRPAEV*PEQTPG Trigger: ACCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCG...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCCCACCCCGTTTCTTGTaGAGGAAGGCAACAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCPPRFL*RKATAP Trigger: TGGAGCTGTTGCCTTCCTTCACAAGAAACGGGGTGG...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | GCAGTATGTGACTGCCTAGCTTATGCAAGCAAAGGGATTTTGAGAGAATGCCTGGCCCCCAGCACAGTCTaGACCACCCAGGAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AVCDCLAYASKGILRECLAPSTV*TTQEAT Trigger: GGTGGCCTCCTGGGTGGTGCAGACTGTGCTGGGGGC...CAGGCATTCTCTCAAAATCCCTTTGCTTGCATAAGCTAGGCAGTCACATACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | TGGGTAGGATGTAGGAGCTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGTGGCAGCCACAGCGGTaGAGAAACTTGCCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: WVGCRSYGKHQRLAVLTLWQPQR*RNLPAQ Trigger: TTGTGCTGGCAAGTTTCTGCACCGCTGTGGCTGCCA...CAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAGCTCCTACATCCTACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CAGGATCTTGGAAATTTTGGTTCTCTTCTTTCCTCCCCCGTTGTGGTGGTGCTGCTGCTGCCCTGGCTCTaGGTGGAAGCGGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDLGNFGSLLSSPVVVVLLLPWL*VEADAG Trigger: TCCAGCATCCGCTTCCACCCAGAGCCAGGGCAGCAG...CAGCACCACCACAACGGGGGAGGAAAGAAGAGAACCAAAATTTCCAAGATCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | ACACCACCCTGTTCATCATGGAGGGCTTTGATTGTCTTCTCAGATTTTGGCTGCCCAGCACTCTGCTGCTaGCCTGGCTCTGGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TPPCSSWRALIVFSDFGCPALCC*PGSGWK Trigger: CTTCCACCCAGAGCCAGGGCAGCAGCAGAGTGCTGG...GCAGCCAAAATCTGAGAAGACAATCAAAGCCCTCCATGATGAACAGGGTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAAGGCCACCAGCACTCTaGTGCTGCCCTGGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGRPPAL*CCPGSG Trigger: CCCAGAGCCAGGGCAGCAGCAGAGTGCTGGTGGCCT...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCGCCAGAGCAGACTCCTaGTGGATGTGCACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCARADS*WMCTSM Trigger: CATTGATGTGCACATCCACCAGGAGTCTGCTCTGGC...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CAGTGTGAATTCCCTGGTGTGACAAAGCAAGGACCTGCCAGCAATAACAGGAGAACTCTGCTGCTGCCCTaGCTCTGGGTGGAAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QCEFPGVTKQGPASNNRRTLLLP*LWVEAD Trigger: ATCCGCTTCCACCCAGAGCCAGGGCAGCAGCAGAGT...TCTCCTGTTATTGCTGGCAGGTCCTTGCTTTGTCACACCAGGGAATTCACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | TATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGTGGTGGACCATCCATATaGAGAGTCTCTTTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YGKHQRLAVLTLLCLPDSGGPSI*RVSLTD Trigger: GTCTGTCAAAGAGACTCTTCATATGGATGGTCCACC...ACTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | CCCACTCTGGGAGTCTTGAATAGCACAATCCTGAACACCCGGTCATCTGTTTGCTGGCAGCCACAGCGGTaGAGAAACTTGCCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLGVLNSTILNTRSSVCWQPQR*RNLPAQ Trigger: TTGTGCTGGCAAGTTTCTGCACCGCTGTGGCTGCCA...GCAAACAGATGACCGGGTGTTCAGGATTGTGCTATTCAAGACTCCCAGAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCATGTGCACATCAATGTaGGTGGGTTGTGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCMCTSM*VGCGAS Trigger: TGAGGCTCCACAACCCACCCACATTGATGTGCACAT...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | ACACCACCCTGTTCATCATGGAGGGCTTTGATTGTCTTCTCAGATTTTGGCTGCACTCTGCTGCTGCCCTaGCTCTGGGTGGAAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPPCSSWRALIVFSDFGCTLLLP*LWVEAD Trigger: ATCCGCTTCCACCCAGAGCCAGGGCAGCAGCAGAGT...GCAGCCAAAATCTGAGAAGACAATCAAAGCCCTCCATGATGAACAGGGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | CTGGGAGTCTTGAATAGCACAATCCTGAACACCCGGTCATCTGTTTGCAGGTTGCCACCCCGTTTCTTGTaGAGGAAGGCAACAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGVLNSTILNTRSSVCRLPPRFL*RKATAP Trigger: TGGAGCTGTTGCCTTCCTTCACAAGAAACGGGGTGG...CAACCTGCAAACAGATGACCGGGTGTTCAGGATTGTGCTATTCAAGACTCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | CAGGATCTTGGAAATTTTGGTTCTCTTCTTTCCTCCCCCGTTGTGGTGGTGCTGAGACACATACAGGGGTaGGAGAAGCCAGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QDLGNFGSLLSSPVVVVLRHIQG*EKPGAA Trigger: TGCTGCTCCTGGCTTCTCTCACCCCTGTATGTGTCT...CAGCACCACCACAACGGGGGAGGAAAGAAGAGAACCAAAATTTCCAAGATCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | AGGACGGTGAAACACATTTGTAATCCCAATACTCAGAAGGCTGAGACAGAAGGACCAGCACTCTGCTGCTaGCCTGGCTCTGGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTVKHICNPNTQKAETEGPALCC*PGSGWK Trigger: CTTCCACCCAGAGCCAGGGCAGCAGCAGAGTGCTGG...TCCTTCTGTCTCAGCCTTCTGAGTATTGGGATTACAAATGTGTTTCACCGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| CDS-3UTR CCA 90 bp | CTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGCGCCTTCGGAATACATaGCTAAATAATGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LWEASEACCPHAALPPRQRLRNT*LNNGLC Trigger: ACATAGGCCATTATTTAGCCATGTATTCCGAAGGCG...CTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGACGGCCAGCAGAAGTTTaGCCAGAGCAGACTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGRPAEV*PEQTPG Trigger: ACCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCG...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGGGGACAGTCCCTTTCCCCCTCACCCTGAACACCCGGTCATCTGTTTGCCGCCTTCGGAATACATaGCTAAATAATGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: IQGTVPFPLTLNTRSSVCRLRNT*LNNGLC Trigger: ACATAGGCCATTATTTAGCCATGTATTCCGAAGGCG...GCAAACAGATGACCGGGTGTTCAGGGTGAGGGGGAAAGGGACTGTCCCCTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| CDS-3UTR TCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCTATGAAGAGTCTCTTTaGCAGACATCATCTCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCYEESL*QTSSPR Trigger: TCTCGGAGATGATGTCTGTCAAAGAGACTCTTCATA...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAAGACACATACAGGGGTaGGAGAAGCCAGGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGRHIQG*EKPGAA Trigger: TGCTGCTCCTGGCTTCTCTCACCCCTGTATGTGTCT...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGATGGCAGCCACAGCGGTaGAGAAACTTGCCAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGWQPQR*RNLPAQ Trigger: TTGTGCTGGCAAGTTTCTGCACCGCTGTGGCTGCCA...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | GCAATAACAGGAGAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGCGGCCAGCAGAAGTTTaGCCAGAGCAGACTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AITGEFIIKLLPEEGYRTRPAEV*PEQTPG Trigger: ACCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCG...CGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | CTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCTGCCGCCTTCGGAATACATaGCTAAATAATGGCCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPEEGYRTVKDGETSKCCRLRNT*LNNGLC Trigger: ACATAGGCCATTATTTAGCCATGTATTCCGAAGGCG...GCAGCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGACCCAAGAGCATAGCTTaGAGGCTCATGAGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGPKSIA*RLMSRV Trigger: GACCCTGCTCATGAGCCTCCAAGCTATGCTCTTGGG...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| 3UTR CAA 72 bp | GGGACCAGAGATCTTGTAGGTCAGAGTCCCATACTGTaGGAAAAGCTGGGGATGCAGAATGTGACTTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTRDLVGQSPIL*EKLGMQNVTLG Trigger: GCCTAAAGTCACATTCTGCATCCCCAGCTTTTCCAACAGTATGGGACTCTGACCTACAAGATCTCTGGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204309.2 |
||
| CDS-3UTR CCA 90 bp | CCTAGCTTATGCAAGCAAAGGGATTTTGAGAGAATGCCTGCTTTCCCACTCTGGATGTGCACATCAATGTaGGTGGGTTGTGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLCKQRDFERMPAFPLWMCTSM*VGCGAS Trigger: TGAGGCTCCACAACCCACCCACATTGATGTGCACAT...CCAGAGTGGGAAAGCAGGCATTCTCTCAAAATCCCTTTGCTTGCATAAGCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
||
| CDS-3UTR CCA 90 bp | AGGACGGTGAAACACATTTGTAATCCCAATACTCAGAAGGCTGAGACAGAAGGACCCAAGAGCATAGCTTaGAGGCTCATGAGCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTVKHICNPNTQKAETEGPKSIA*RLMSRV Trigger: GACCCTGCTCATGAGCCTCCAAGCTATGCTCTTGGG...TCCTTCTGTCTCAGCCTTCTGAGTATTGGGATTACAAATGTGTTTCACCGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
||
| CDS-3UTR CCA 90 bp | TGGTGCTACATAGCAAGTCTCCATCCTCAACATAAATCAATGAGACTTCTGAAATGCCCTGGCTCTGGGTaGAAGCGGATGCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WCYIASLHPQHKSMRLLKCPGSG*KRMLES Trigger: GGATTCCAGCATCCGCTTCCACCCAGAGCCAGGGCA...TTTCAGAAGTCTCATTGATTTATGTTGAGGATGGAGACTTGCTATGTAGCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
||
| CDS-3UTR CCA 90 bp | GCAATAACAGGAGAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGATGTGCACATCAATGTaGGTGGGTTGTGGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AITGEFIIKLLPEEGYRTMCTSM*VGCGAS Trigger: TGAGGCTCCACAACCCACCCACATTGATGTGCACAT...CGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
||
| 3UTR CAA 72 bp | GACCTGCCAGCAATAACAGGAGAGTTTATTATCAAGTaGCTGCCTGAGGAGGGATATAGGACGGTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLPAITGEFIIK*LPEEGYRTVKD Trigger: ATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGCTGGCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
||
| CDS-3UTR TCA 90 bp | AGGACGGTGAAACACATTTGTAATCCCAATACTCAGAAGGCTGAGACAGAAGGAGGTGGACCATCCATATaGAGAGTCTCTTTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTVKHICNPNTQKAETEGGGPSI*RVSLTD Trigger: GTCTGTCAAAGAGACTCTTCATATGGATGGTCCACC...TCCTTCTGTCTCAGCCTTCTGAGTATTGGGATTACAAATGTGTTTCACCGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
||
| CDS-3UTR TCA 90 bp | GCAATAACAGGAGAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGGTGGACCATCCATATaGAGAGTCTCTTTGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: AITGEFIIKLLPEEGYRTGGPSI*RVSLTD Trigger: GTCTGTCAAAGAGACTCTTCATATGGATGGTCCACC...CGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | CTGGGAGTCTTGAATAGCACAATCCTGAACACCCGGTCATCTGTTTGCAGGTTGCTGTTTCCGCCTTTGTaGAAAATCTTTTCCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: LGVLNSTILNTRSSVCRLLFPPL*KIFSRC Trigger: ACATCTGGAAAAGATTTTTCACAAAGGCGGAAACAG...CAACCTGCAAACAGATGACCGGGTGTTCAGGATTGTGCTATTCAAGACTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR CCA 90 bp | TTCTTCAAGAACGTTCCAGGGACCAGAGATCTTGTAGGTCAGAGTCCCATACTGCGCCTTCGGAATACATaGCTAAATAATGGCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: FFKNVPGTRDLVGQSPILRLRNT*LNNGLC Trigger: ACATAGGCCATTATTTAGCCATGTATTCCGAAGGCG...CAGTATGGGACTCTGACCTACAAGATCTCTGGTCCCTGGAACGTTCTTGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204309.2 |
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| CDS-3UTR TCA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGATATGAAGAGTCTCTTTaGCAGACATCATCTCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGYEESL*QTSSPR Trigger: TCTCGGAGATGATGTCTGTCAAAGAGACTCTTCATA...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR GCA 90 bp | GTACAAGCATGCAAGACAGAAATGAGAAATACCAATTTCCCCTTTGAAAGTAACAGCGGTGCAGAAACTTaGCAGCACAAGAAGGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VQACKTEMRNTNFPFESNSGAET*QHKKGP Trigger: AGGACCCTTCTTGTGCTGGCAAGTTTCTGCACCGCT...GTTACTTTCAAAGGGGAAATTGGTATTTCTCATTTCTGTCTTGCATGCTTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | GCAATAACAGGAGAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGCTGTTTCCGCCTTTGTaGAAAATCTTTTCCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: AITGEFIIKLLPEEGYRTLFPPL*KIFSRC Trigger: ACATCTGGAAAAGATTTTTCACAAAGGCGGAAACAG...CGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR TCA 90 bp | ACGGTGAAACACATTTGTAATCCCAATACTCAGAAGGCTGAGACAGAAGGATCACTGTTTCCGCCTTTGTaGAAAATCTTTTCCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: TVKHICNPNTQKAETEGSLFPPL*KIFSRC Trigger: ACATCTGGAAAAGATTTTTCACAAAGGCGGAAACAG...TGATCCTTCTGTCTCAGCCTTCTGAGTATTGGGATTACAAATGTGTTTCACCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| CDS GCA 90 bp | CCCCCAGCACAGTCTGCACCACCCAGGAGGCCACCAGCACTCTGCTaGTGCCCTGGCTCTGGGTGGAAGCGGATGCTGGAATCCTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: PPAQSAPPRRPPALC*CPGSGWKRMLESLA Trigger: TGCTAAGGATTCCAGCATCCGCTTCCACCCAGAGCCAGGGCAGCAGCAGAGTGCTGGTGGCCTCCTGGGTGGTGCAGACTGTGCTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS GCA 90 bp | GAGCCCCCAGCACAGTCTGCACCACCCAGGAGGCCACCAGCACTCTaGTGCTGCCCTGGCTCTGGGTGGAAGCGGATGCTGGAATCCTTA | + |
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Preference number: 5 (lower is better) Translates to: EPPAQSAPPRRPPAL*CCPGSGWKRMLESL Trigger: TAAGGATTCCAGCATCCGCTTCCACCCAGAGCCAGGGCAGCAGCAGAGTGCTGGTGGCCTCCTGGGTGGTGCAGACTGTGCTGGGGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | GGGACAGTCCCTTTCCCCCTCACCCTGAACACCCGGTCATCTGTTTGCAGGTTGCCGGCCAGCAGAAGTTaGGCCAGAGCAGACTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GTVPFPLTLNTRSSVCRLPASRS*ARADSW Trigger: CCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCGG...CAACCTGCAAACAGATGACCGGGTGTTCAGGGTGAGGGGGAAAGGGACTGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| CDS TCA 90 bp | AGAAGGGTCCTCATCAGGGCCCAGCAGGTACCACCCCGTTTCTTGTaGAGGAAGGCAACAGCTCCAGCCAGCATAGCCACGATCCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: RRVLIRAQQVPPRFL*RKATAPASIATIPV Trigger: GACTGGGATCGTGGCTATGCTGGCTGGAGCTGTTGCCTTCCTTCACAAGAAACGGGGTGGTACCTGCTGGGCCCTGATGAGGACCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS CCA 90 bp | AATGAGCATCCGGCCAGCAGAAGTTTGGCCAGAGCAGACTCCTGGTaGATGTGCACATCAATGTGGGTGGGTTGTGGAGCCTCAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: NEHPASRSLARADSW*MCTSMWVGCGASGS Trigger: GGACCCTGAGGCTCCACAACCCACCCACATTGATGTGCACATCCACCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCGGATGCTCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS CCA 90 bp | AGCAATGAGCATCCGGCCAGCAGAAGTTTGGCCAGAGCAGACTCCTaGTGGATGTGCACATCAATGTGGGTGGGTTGTGGAGCCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SNEHPASRSLARADS*WMCTSMWVGCGASG Trigger: CCCTGAGGCTCCACAACCCACCCACATTGATGTGCACATCCACCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCGGATGCTCATTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | TATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGCTCTGCCTCCCAGACAGTATCAATGTGGGTGGGTaGTGGAGCCTCAGGGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: YGKHQRLAVLTLLCLPDSINVGG*WSLRVH Trigger: GTGGACCCTGAGGCTCCACAACCCACCCACATTGAT...ACTGTCTGGGAGGCAGAGCAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | TTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGAGACAAGCAAGTGCCCGGCCAGCAGAAGTTaGGCCAGAGCAGACTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLPEEGYRTVKDGETSKCPASRS*ARADSW Trigger: CCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCGG...GCACTTGCTTGTCTCTCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | CAGTGTGAATTCCCTGGTGTGACAAAGCAAGGACCTGCCAGCAATAACAGGAGAATCAATGTGGGTGGGTaGTGGAGCCTCAGGGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: QCEFPGVTKQGPASNNRRINVGG*WSLRVH Trigger: GTGGACCCTGAGGCTCCACAACCCACCCACATTGAT...TCTCCTGTTATTGCTGGCAGGTCCTTGCTTTGTCACACCAGGGAATTCACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | CAGTGTGAATTCCCTGGTGTGACAAAGCAAGGACCTGCCAGCAATAACAGGAGACAGCGGTGCAGAAACTaGCCAGCACAAGAAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QCEFPGVTKQGPASNNRRQRCRN*PAQEGS Trigger: GGACCCTTCTTGTGCTGGCAAGTTTCTGCACCGCTG...TCTCCTGTTATTGCTGGCAGGTCCTTGCTTTGTCACACCAGGGAATTCACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAATCAATGTGGGTGGGTaGTGGAGCCTCAGGGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGINVGG*WSLRVH Trigger: GTGGACCCTGAGGCTCCACAACCCACCCACATTGAT...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | TGGGTAGGATGTAGGAGCTATGGGAAGCATCAGAGGCTTGCTGTCCTCACGCTGGGGTCTTTAGCATGCTaGTGTAGTATATGCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: WVGCRSYGKHQRLAVLTLGSLAC*CSICTR Trigger: CCTTGTGCATATACTACACAAGCATGCTAAAGACCC...CAGCGTGAGGACAGCAAGCCTCTGATGCTTCCCATAGCTCCTACATCCTACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | AGGACGGTGAAACACATTTGTAATCCCAATACTCAGAAGGCTGAGACAGAAGGACAGCGGTGCAGAAACTaGCCAGCACAAGAAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: RTVKHICNPNTQKAETEGQRCRN*PAQEGS Trigger: GGACCCTTCTTGTGCTGGCAAGTTTCTGCACCGCTG...TCCTTCTGTCTCAGCCTTCTGAGTATTGGGATTACAAATGTGTTTCACCGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101426.11 |
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| CDS-3UTR CAA 90 bp | GCAATAACAGGAGAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGCAGCGGTGCAGAAACTaGCCAGCACAAGAAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AITGEFIIKLLPEEGYRTQRCRN*PAQEGS Trigger: GGACCCTTCTTGTGCTGGCAAGTTTCTGCACCGCTG...CGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTCTCCTGTTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | GAGTTTATTATCAAGTTGCTGCCTGAGGAGGGATATAGGACGGTGAAGGATGGAGGGTCTTTAGCATGCTaGTGTAGTATATGCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: EFIIKLLPEEGYRTVKDGGSLAC*CSICTR Trigger: CCTTGTGCATATACTACACAAGCATGCTAAAGACCC...TCCATCCTTCACCGTCCTATATCCCTCCTCAGGCAGCAACTTGATAATAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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| CDS-3UTR CAA 90 bp | CCTGGTGTGACAAAGCAAGGACCTGCCAGCAATAACAGGAGAGTTTATTATCAAGGGTCTTTAGCATGCTaGTGTAGTATATGCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: PGVTKQGPASNNRRVYYQGSLAC*CSICTR Trigger: CCTTGTGCATATACTACACAAGCATGCTAAAGACCC...TTGATAATAAACTCTCCTGTTATTGCTGGCAGGTCCTTGCTTTGTCACACCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101426.11 ENSMUST00000204482.3 |
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| CDS CCA 72 bp | AGGCCACCAGCACTCTGCTGCTGCCCTGGCTCTGGGTaGAAGCGGATGCTGGAATCCTTAGCAATGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: RPPALCCCPGSG*KRMLESLAMSI Trigger: GATGCTCATTGCTAAGGATTCCAGCATCCGCTTCCACCCAGAGCCAGGGCAGCAGCAGAGTGCTGGTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS GCA 72 bp | CCCAATAACGATGGCAGCCACAGCGGTGCAGAAACTTaGCAGCACAAGAAGGGTCCTCATCAGGGCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PNNDGSHSGAET*QHKKGPHQGPA Trigger: TGCTGGGCCCTGATGAGGACCCTTCTTGTGCTGGCAAGTTTCTGCACCGCTGTGGCTGCCATCGTTATTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS CCA 72 bp | CATCCGGCCAGCAGAAGTTTGGCCAGAGCAGACTCCTaGTGGATGTGCACATCAATGTGGGTGGGTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HPASRSLARADS*WMCTSMWVGCG Trigger: TCCACAACCCACCCACATTGATGTGCACATCCACCAGGAGTCTGCTCTGGCCAAACTTCTGCTGGCCGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204400.2 ENSMUST00000204482.3 |
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| CDS CCA 72 bp | CGATCCCAGTCCAGAAGGGGGCGCCTTCGGAATACATaGCTAAATAATGGCCTATGTAGAGGGTTCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: RSQSRRGRLRNT*LNNGLCRGFHP Trigger: TGGGTGGAACCCTCTACATAGGCCATTATTTAGCCATGTATTCCGAAGGCGCCCCCTTCTGGACTGGGATCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204309.2 ENSMUST00000204482.3 |
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| CDS CCA 72 bp | AGGAGCAGCAGCACCCAGATACCCAAGAGCATAGCTTaGAGGCTCATGAGCAGGGTCTTTAGCATGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: RSSSTQIPKSIA*RLMSRVFSMLV Trigger: CACAAGCATGCTAAAGACCCTGCTCATGAGCCTCCAAGCTATGCTCTTGGGTATCTGGGTGCTGCTGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000203639.3 ENSMUST00000204482.3 |
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| CDS TCA 72 bp | CACCCAGCAGTTTCTTCTCCTCTGTTTCCGCCTTTGTaGAAAATCTTTTCCAGATGTAGACACATACAGGGG | + |
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Preference number: 6 (lower is better) Translates to: HPAVSSPLFPPL*KIFSRCRHIQG Trigger: CCCCTGTATGTGTCTACATCTGGAAAAGATTTTTCACAAAGGCGGAAACAGAGGAGAAGAAACTGCTGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101426.11 ENSMUST00000168406.4 ENSMUST00000204482.3 |
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