Pregenerated sensors for TMEM175 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013495Ensembl transcript IDs: ENSMUST00000063272.13, ENSMUST00000078323.13, ENSMUST00000120327.3, ENSMUST00000146207.6
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGTAGAGCTTCTACTCTGGCACCTACACAAATGGAAGCAGCTCTaGTGGCCAGGTCTTGCTGGAGGCACCAGGTTCACAGAACGAGAG | + |
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Preference number: 1 (lower is better) Translates to: AVELLLWHLHKWKQL*WPGLAGGTRFTERE Trigger: CTCTCGTTCTGTGAACCTGGTGCCTCCAGCAAGACCTGGCCATCAGAGCTGCTTCCATTTGTGTAGGTGCCAGAGTAGAAGCTCTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR CCA 90 bp | CTGGCACCTACACAAATGGAAGCAGCTCTGATGGCCAGGTCTTGCTaGAGGCACCAGGTTCACAGAACGAGAGAAAAGCGGTCTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LAPTQMEAALMARSC*RHQVHRTREKRSLP Trigger: TGGAAGAGACCGCTTTTCTCTCGTTCTGTGAACCTGGTGCCTCCAGCAAGACCTGGCCATCAGAGCTGCTTCCATTTGTGTAGGTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR GCA 90 bp | ACTCTGGCACCTACACAAATGGAAGCAGCTCTGATGGCCAGGTCTTaGTGGAGGCACCAGGTTCACAGAACGAGAGAAAAGCGGTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: TLAPTQMEAALMARS*WRHQVHRTREKRSL Trigger: AAGAGACCGCTTTTCTCTCGTTCTGTGAACCTGGTGCCTCCAGCAAGACCTGGCCATCAGAGCTGCTTCCATTTGTGTAGGTGCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR GCA 90 bp | AAGCAGCTAACCATGTTGGGCCCTGGCCTAACAGATCCAGAAAGCTaGCTGTTCTCCTGTACTGACTGGGTGGGTGTGGCATTCTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: KQLTMLGPGLTDPES*LFSCTDWVGVAFSS Trigger: ACTTGAGAATGCCACACCCACCCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAACATGGTTAGCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR TCA 90 bp | TTCTCCTGTGTGTCATTACTTGGCTTGTGGACACCTTCAGAAGTGTaGTACCAGGGTAGTGTGTGGACCAGGGTGTCTCCCTGCCTGACA | + |
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Preference number: 1 (lower is better) Translates to: FSCVSLLGLWTPSEV*YQGSVWTRVSPCLT Trigger: TGTCAGGCAGGGAGACACCCTGGTCCACACACTACCCTGGTATCACACTTCTGAAGGTGTCCACAAGCCAAGTAATGACACACAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR CCA 90 bp | CCTGGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTGTACTGACTaGGTGGGTGTGGCATTCTCAAGTCCCCTGGACTTATCACTAGAT | + |
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Preference number: 1 (lower is better) Translates to: PGLTDPESCLFSCTD*VGVAFSSPLDLSLD Trigger: ATCTAGTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACCCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR CCA 90 bp | GGCCAGCAGATGGACTTAGCTGTAGCACTGACCATAGCATCTTCATaGGTCTTGGGATGTTTCCATCCCAATGTCATGTGCAAACTTAGG | + |
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Preference number: 1 (lower is better) Translates to: GQQMDLAVALTIASS*VLGCFHPNVMCKLR Trigger: CCTAAGTTTGCACATGACATTGGGATGGAAACATCCCAAGACCCATGAAGATGCTATGGTCAGTGCTACAGCTAAGTCCATCTGCTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR GCA 90 bp | TGGAGGCACCAGGTTCACAGAACGAGAGAAAAGCGGTCTCTTCCATaGACCCAAGAATTCATTGTCACACTTAAGACCCTAGAAAGAATT | + |
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Preference number: 1 (lower is better) Translates to: WRHQVHRTREKRSLP*TQEFIVTLKTLERI Trigger: AATTCTTTCTAGGGTCTTAAGTGTGACAATGAATTCTTGGGTGCATGGAAGAGACCGCTTTTCTCTCGTTCTGTGAACCTGGTGCCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR TCA 90 bp | TTGTTTGTAAATTACGGTCAGTGTAGCATGTCCTCTGTATTTAAGTaGGACTGTCTTTATGTGGAGTGTGTCCTGTGCACTGACTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: LFVNYGQCSMSSVFK*DCLYVECVLCTDWS Trigger: GGACCAGTCAGTGCACAGGACACACTCCACATAAAGACAGTCTCACTTAAATACAGAGGACATGCTACACTGACCGTAATTTACAAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR TCA 90 bp | TACCTGGTTGAGGAGTGTGTAAATAACATCTGTTGTGGAGTGGCTTaGACTCCCTTAGACTCAACTTATAGCACTTTATATACATGGTGT | + |
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Preference number: 1 (lower is better) Translates to: YLVEECVNNICCGVA*TPLDSTYSTLYTWC Trigger: ACACCATGTATATAAAGTGCTATAAGTTGAGTCTAAGGGAGTTCAAGCCACTCCACAACAGATGTTATTTACACACTCCTCAACCAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR GCA 90 bp | AGGAACAAATACACTCCAGTCACGTGCTTTCTAATGAGTACAGAATaGATAGTAACAGCTCAACAACACAAGGTAAACATTCCAACTAAA | + |
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Preference number: 1 (lower is better) Translates to: RNKYTPVTCFLMSTE*IVTAQQHKVNIPTK Trigger: TTTAGTTGGAATGTTTACCTTGTGTTGTTGAGCTGTTACTATGCATTCTGTACTCATTAGAAAGCACGTGACTGGAGTGTATTTGTTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGCCCAATACGTCTGGATaGAGGCCATCCAGGTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQPNTSG*RPSRWV Trigger: GACCCACCTGGATGGCCTGCATCCAGACGTATTGGG...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGCCTGGCTCGGGGAAGACTATGTGGGAAGTCTCCTGTGATGAGTACCCCGTACTTTTGAGGATATaGGCCAGACAGGAGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PRPGSGKTMWEVSCDEYPVLLRI*ARQELL Trigger: GAGAAGCTCCTGTCTGGCTCATATCCTCAAAAGTAC...GGGGTACTCATCACAGGAGACTTCCCACATAGTCTTCCCCGAGCCAGGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCCCTGGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTGTACTGACTGGTCTTCAACTCCAGAGTaGGCACCTAGTGCCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LGPGLTDPESCLFSCTDWSSTPE*APSAQK Trigger: CTTCTGGGCACTAGGTGCCCACTCTGGAGTTGAAGA...CCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGTTCTCCTGTACTGACTaGGTGGGTGTGGCATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQFSCTD*VGVAFS Trigger: TGAGAATGCCACACCCACCCAGTCAGTACAGGAGAA...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR CAA 90 bp | TACTCTGGCACCTACACAAATGGAAGCAGCTCTGATGGCCAGGTCTaGCTGGAGGCACCAGGTTCACAGAACGAGAGAAAAGCGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: YSGTYTNGSSSDGQV*LEAPGSQNERKAVS Trigger: AGAGACCGCTTTTCTCTCGTTCTGTGAACCTGGTGCCTCCAGCAAGACCTGGCCATCAGAGCTGCTTCCATTTGTGTAGGTGCCAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR GCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGTTGATCCTGGCTGGATaGTGCTGCCTCAAACAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQLILAG*CCLKQD Trigger: ATCTTGTTTGAGGCAGCAGCATCCAGCCAGGATCAA...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGAGGATATGAGCCAGACAGGACCCCTGGCAATGTTGTaGGCAAGGGAGGAAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: LAVPPGKLCTFEDMSQTGPLAML*AREESK Trigger: TTTACTTTCCTCCCTTGCCCACAACATTGCCAGGGG...TCCTGTCTGGCTCATATCCTCAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR-3UTR GCA 90 bp | TACAGGAATGGGCAAACAGACTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGATCCTGGCTGGATGCTaGTGCCTCAAACAAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: YRNGQTDWQSRQGSSVLLILAGC*CLKQDL Trigger: GAGATCTTGTTTGAGGCAGCAGCATCCAGCCAGGAT...CAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGTGTGGCATTCTCAAGTCCCCTGGACTTATCACTAGATGTCAGTTTGGGCCCACCCCCTGCTTCTaGCAAAACTGCATACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGCGILKSPGLITRCQFGPTPCF*QNCIQV Trigger: CACTTGTATGCAGTTTTGGCAGAAGCAGGGGGTGGG...CCCAAACTGACATCTAGTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR CCA 90 bp | TACAGGAATGGGCAAACAGACTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGCCCCTGGCAATGTTGTaGGCAAGGGAGGAAAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: YRNGQTDWQSRQGSSVLLPLAML*AREESK Trigger: TTTACTTTCCTCCCTTGCCCACAACATTGCCAGGGG...CAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTACCCTTGATCCTGGCTaGATGCTGCTGCCTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: TPKSQSVQSLLLCVITWLTLDPG*MLLPQT Trigger: TGTTTGAGGCAGCAGCATCCAGCCAGGATCAAGGGT...AAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR GCA 90 bp | GCCAAGATGAGAGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGACACAGTGTGGGTTTTaGTGTCCCATAGCTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: AKMRGLNHPAFLWLVTHWTQCGF*CPIADS Trigger: AGAGTCAGCTATGGGACAGCAAAACCCACACTGTGT...CCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCTCTCATCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGTGTGGCATTCTCAAGTCCCCTGGACTTATCACTAGATGTCAGTTTGGGCAACTGGTACAGGAATaGGCAAACAGACTGGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GGCGILKSPGLITRCQFGQLVQE*ANRLAV Trigger: GACTGCCAGTCTGTTTGCCCATTCCTGTACCAGTTG...CCCAAACTGACATCTAGTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR CCA 90 bp | TTGGGCCCTGGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTGTACTGACTGGCTGTGTGTCATTACTTaGCTTGTGGACACCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LGPGLTDPESCLFSCTDWLCVIT*LVDTFR Trigger: TCTGAAGGTGTCCACAAGCCAAGTAATGACACACAG...CCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCCATAGGATAGACCCTTaGTCCTGGCTGGATGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGHRIDP*SWLDAA Trigger: AGCAGCATCCAGCCAGGATCAAGGGTCTATCCTATG...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCACCCTTGATCCTGGCTaGATGCTGCTGCCTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGTLDPG*MLLPQT Trigger: TGTTTGAGGCAGCAGCATCCAGCCAGGATCAAGGGT...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR CAA 90 bp | GTGGGTCCTCTGATTTCATTTGTTCTTTCAAAGCAGCTAACCATGTaGGGCCCTGGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VGPLISFVLSKQLTM*GPGLTDPESCLFSC Trigger: ACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAACATGGTTAGCTGCTTTGAAAGAACAAATGAAATCAGAGGACCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGTGTGGCATTCTCAAGTCCCCTGGACTTATCACTAGATGTCAGTTTGGGTATATACATGGTGTTTaGCTGCCTACAGCCCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: GGCGILKSPGLITRCQFGYIHGV*LPTALP Trigger: AGGAAGGGCTGTAGGCAGGCAAACACCATGTATATA...CCCAAACTGACATCTAGTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR-3UTR GCA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCTTGATCCTGGCTGGATaGTGCTGCCTCAAACAAGAT | + |
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Preference number: 2 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGLILAG*CCLKQD Trigger: ATCTTGTTTGAGGCAGCAGCATCCAGCCAGGATCAA...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTGCTTGGCTACATGCTTGCCATTCAGCACTCTGCTCTGTATTTAGTTTATCTACAGTGTGCATGTaGTGGACAGAGGGCAACTTT | + |
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Preference number: 2 (lower is better) Translates to: KSAWLHACHSALCSVFSLSTVCM*WTEGNF Trigger: AAAGTTGCCCTCTGTCCATCACATGCACACTGTAGA...TAAACTAAATACAGAGCAGAGTGCTGAATGGCAAGCATGTAGCCAAGCAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGGACTGTCATAAGGAACAAATACACTCCAGTCACGTGCTTTCTAATGAGCACCTGTGGCTTCCCTaGTCAAAGTCTGCTTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: KKDCHKEQIHSSHVLSNEHLWLP*SKSAWL Trigger: TAGCCAAGCAGACTTTGACCAGGGAAGCCACAGGTG...CTCATTAGAAAGCACGTGACTGGAGTGTATTTGTTCCTTATGACAGTCCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGGACTGTCATAAGGAACAAATACACTCCAGTCACGTGCTTTCTAATGAGGCTTGGCTACATGCTTaGCATTCAGCACTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KKDCHKEQIHSSHVLSNEAWLHA*HSALCS Trigger: AGAGCAGAGTGCTGAATGGCAAGCATGTAGCCAAGC...CTCATTAGAAAGCACGTGACTGGAGTGTATTTGTTCCTTATGACAGTCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR-3UTR GCA 90 bp | TATTTAGTTTATAAAGTCTCTGGGTTCCCTGGGTCCTACCCACTCAGCTGGTATTTTTGTTTGTTTGTGTaGGTGTATACAGGTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: YLVYKVSGFPGSYPLSWYFCLFV*VYTGAH Trigger: ATGAGCACCTGTATACACGCACACAAACAAACAAAA...ATACCAGCTGAGTGGGTAGGACCCAGGGAACCCAGAGACTTTATAAACTAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR-3UTR CCA 90 bp | CCAAAAAGGACTGTCATAAGGAACAAATACACTCCAGTCACGTGCTTTCTAATGTCCTACCCACTCAGCTaGTATGTTATCTCTTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: PKRTVIRNKYTPVTCFLMSYPLS*YVISSK Trigger: TTTTGAAGAGATAACATACCAGCTGAGTGGGTAGGA...CATTAGAAAGCACGTGACTGGAGTGTATTTGTTCCTTATGACAGTCCTTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR-3UTR TCA 90 bp | TACCATGTATTTTCCAGAAATCAAACTCAGGTCATTAGGTTTGGTGGCAAGTACACTATTAGGATGCTTTaGTTAAAACTGCAGTGTACC | + |
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Preference number: 2 (lower is better) Translates to: YHVFSRNQTQVIRFGGKYTIRML*LKLQCT Trigger: GGTACACTGCAGTTTTAATCAAAGCATCCTAATAGT...GTACTTGCCACCAAACCTAATGACCTGAGTTTGATTTCTGGAAAATACATGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR-3UTR CAA 90 bp | CTAGCCCCAGGCCTGGCTCGGGGAAGACTATGTGGGAAGTCTCCTGTGATGAGTATTCCCCTGGCAATGTaGTGGGCAAGGGAGGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: LAPGLARGRLCGKSPVMSIPLAM*WAREES Trigger: ACTTTCCTCCCTTGCCCACAACATTGCCAGGGGAAT...ACTCATCACAGGAGACTTCCCACATAGTCTTCCCCGAGCCAGGCCTGGGGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR GCA 72 bp | GAAGGCACTTCACCTGTGGCTTCCCTGGTCAAAGTCTaGTTGGCTACATGCTTGCCATTCAGCACTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: EGTSPVASLVKV*LATCLPFSTLL Trigger: GAGCAGAGTGCTGAATGGCAAGCATGTAGCCAAGCAGACTTTGACCAGGGAAGCCACAGGTGAAGTGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR CCA 72 bp | ACACAAATGGAAGCAGCTCTGATGGCCAGGTCTTGCTaGAGGCACCAGGTTCACAGAACGAGAGAAAAGCGG | + |
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Preference number: 3 (lower is better) Translates to: TQMEAALMARSC*RHQVHRTREKR Trigger: CCGCTTTTCTCTCGTTCTGTGAACCTGGTGCCTCCAGCAAGACCTGGCCATCAGAGCTGCTTCCATTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR CCA 72 bp | ACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTaGCCAGCAGATGGACTTAGCTGTAGCACTGACCAT | + |
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Preference number: 3 (lower is better) Translates to: TTQPFFGWSHTG*PADGLSCSTDH Trigger: ATGGTCAGTGCTACAGCTAAGTCCATCTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR TCA 72 bp | CACATGCAGGTCAGAGCAAGGCATAGGATAGACCCTTaGTCCTGGCTGGATGCTGCTGCCTCAAACAAGATC | + |
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Preference number: 3 (lower is better) Translates to: HMQVRARHRIDP*SWLDAAASNKI Trigger: GATCTTGTTTGAGGCAGCAGCATCCAGCCAGGATCAAGGGTCTATCCTATGCCTTGCTCTGACCTGCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
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| 3UTR TCA 72 bp | GTGTCATTACTTGGCTTGTGGACACCTTCAGAAGTGTaGTACCAGGGTAGTGTGTGGACCAGGGTGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: VSLLGLWTPSEV*YQGSVWTRVSP Trigger: GGGAGACACCCTGGTCCACACACTACCCTGGTATCACACTTCTGAAGGTGTCCACAAGCCAAGTAATGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR GCA 72 bp | CCTACACAAATGGAAGCAGCTCTGATGGCCAGGTCTTaGTGGAGGCACCAGGTTCACAGAACGAGAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: PTQMEAALMARS*WRHQVHRTREK Trigger: CTTTTCTCTCGTTCTGTGAACCTGGTGCCTCCAGCAAGACCTGGCCATCAGAGCTGCTTCCATTTGTGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR CCA 72 bp | ATCCAGAAAGCTGCCTGTTCTCCTGTACTGACTGGGTaGGTGTGGCATTCTCAAGTCCCCTGGACTTATCAC | + |
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Preference number: 3 (lower is better) Translates to: IQKAACSPVLTG*VWHSQVPWTYH Trigger: GTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACCCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
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| 3UTR CCA 72 bp | GCACTTCACCTGTGGCTTCCCTGGTCAAAGTCTGCTTaGCTACATGCTTGCCATTCAGCACTCTGCTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: ALHLWLPWSKSA*LHACHSALCSV Trigger: TACAGAGCAGAGTGCTGAATGGCAAGCATGTAGCCAAGCAGACTTTGACCAGGGAAGCCACAGGTGAAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
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| 3UTR CCA 72 bp | AAGGCGCTTGAGAAGGCACTTCACCTGTGGCTTCCCTaGTCAAAGTCTGCTTGGCTACATGCTTGCCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KALEKALHLWLP*SKSAWLHACHS Trigger: TGAATGGCAAGCATGTAGCCAAGCAGACTTTGACCAGGGAAGCCACAGGTGAAGTGCCTTCTCAAGCGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| 3UTR CCA 72 bp | TTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTaGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSNNWYRNGQTD*QSRQGSSVLLR Trigger: CCTCAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| 3UTR CCA 72 bp | ATTTGTTCTTTCAAAGCAGCTAACCATGTTGGGCCCTaGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ICSFKAANHVGP*PNRSRKLPVLL Trigger: CAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAACATGGTTAGCTGCTTTGAAAGAACAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| 3UTR-3UTR CAA 90 bp | CAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTGTGGACAAGCTCAAAGTGGCTaGTTCAGGTTAATCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QKPVSAEPSPVCHYLACGQAQSG*FRLIRQ Trigger: CTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTG...TCCACAAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| 3UTR CCA 72 bp | ATGGACTTAGCTGTAGCACTGACCATAGCATCTTCATaGGTCTTGGGATGTTTCCATCCCAATGTCATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: MDLAVALTIASS*VLGCFHPNVMC Trigger: GCACATGACATTGGGATGGAAACATCCCAAGACCCATGAAGATGCTATGGTCAGTGCTACAGCTAAGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| 3UTR GCA 72 bp | CAGGTTCACAGAACGAGAGAAAAGCGGTCTCTTCCATaGACCCAAGAATTCATTGTCACACTTAAGACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: QVHRTREKRSLP*TQEFIVTLKTL Trigger: TAGGGTCTTAAGTGTGACAATGAATTCTTGGGTGCATGGAAGAGACCGCTTTTCTCTCGTTCTGTGAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| 3UTR CCA 72 bp | CATACTAGTTACAAGGTCTCATCCAGCTGGTGCCCATaGACTGACAAAGTTGTACTTAGGGATGGGAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: HTSYKVSSSWCP*TDKVVLRDGNL Trigger: AAGATTCCCATCCCTAAGTACAACTTTGTCAGTCCATGGGCACCAGCTGGATGAGACCTTGTAACTAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| 3UTR TCA 72 bp | GCCAAATACACAGTGTGGGTTTTGCTGTCCCATAGCTaGCTCTTGTCTTTGTCTAACAACTGGTACAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: AKYTVWVLLSHS*LLSLSNNWYRN Trigger: ATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGCTATGGGACAGCAAAACCCACACTGTGTATTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| 3UTR TCA 72 bp | GTGAGACTGTCTTTATGTGGAGTGTGTCCTGTGCACTaGCTGGTCCTGTCTTTGTGTGTAATTTATCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: VRLSLCGVCPVH*LVLSLCVIYHY Trigger: GTAGTGATAAATTACACACAAAGACAGGACCAGTCAGTGCACAGGACACACTCCACATAAAGACAGTCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| 3UTR TCA 72 bp | AATTACGGTCAGTGTAGCATGTCCTCTGTATTTAAGTaGGACTGTCTTTATGTGGAGTGTGTCCTGTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: NYGQCSMSSVFK*DCLYVECVLCT Trigger: AGTGCACAGGACACACTCCACATAAAGACAGTCTCACTTAAATACAGAGGACATGCTACACTGACCGTAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| 3UTR TCA 72 bp | GAGGAGTGTGTAAATAACATCTGTTGTGGAGTGGCTTaGACTCCCTTAGACTCAACTTATAGCACTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: EECVNNICCGVA*TPLDSTYSTLY Trigger: ATATAAAGTGCTATAAGTTGAGTCTAAGGGAGTTCAAGCCACTCCACAACAGATGTTATTTACACACTCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGAGGCCCCGTAGGACTTaGAGGCCTGCCAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQRPRRT*RPARAR Trigger: CCTTGCCCTGGCAGGCCTTCAAGTCCTACGGGGCCT...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CCA 90 bp | GCCAAGATGAGAGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGAAGCCCAGCATGCGGTaGGAGCTCTGTGTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKMRGLNHPAFLWLVTHWKPSMR*ELCVPS Trigger: GGAGGGGACACAGAGCTCCCACCGCATGCTGGGCTT...CCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCTCTCATCTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | TACAGGAATGGGCAAACAGACTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGCACAGATGTCCAGGATaGGGAGTGTGGCCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YRNGQTDWQSRQGSSVLLHRCPG*GVWPRW Trigger: CCATCGTGGCCACACTCCTCATCCTGGACATCTGTG...CAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCCTGGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTGTACTGACTGGCTCCATGTCGTGAGCTaGAGACTCCCTTTGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPGLTDPESCLFSCTDWLHVVS*RLPLAH Trigger: ATGGGCCAAAGGGAGTCTCCAGCTCACGACATGGAG...CCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGAGGATATGAGCCAGACAGGACAAAGGCCAGCAGGCTaGCACAGGGATACAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVPPGKLCTFEDMSQTGQRPAG*HRDTVQ Trigger: TTGCACTGTATCCCTGTGCCAGCCTGCTGGCCTTTG...TCCTGTCTGGCTCATATCCTCAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | GGTGGGTGTGGCATTCTCAAGTCCCCTGGACTTATCACTAGATGTCAGTTTGGGTGGTCTTGTTGGGGATaGTGTGGCCAGAGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGCGILKSPGLITRCQFGWSCWG*CGQRPR Trigger: ACGGGGCCTCTGGCCACACCATCCCCAACAAGACCA...CCCAAACTGACATCTAGTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGGCCTCAGGTTCACTCTaGTCTTGTTGGGGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQASGSL*SCWGWC Trigger: ACACCATCCCCAACAAGACCAGAGTGAACCTGAGGC...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| 3UTR CAA 72 bp | AGCCAAGATGAGAGGTCTCAACCACCCAGCCTTTCTTaGGTTGGTCACACACTGGCTGGCCAGCAGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQDERSQPPSLS*VGHTLAGQQMD Trigger: GTCCATCTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCTCTCATCTTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGAGGATATGAGCCAGACAGGAGTAGCCTTGCTGATGTaGGGGAGGAAGATGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAVPPGKLCTFEDMSQTGVALLM*GRKMTV Trigger: GACTGTCATCTTCCTCCCTCACATCAGCAAGGCTAC...TCCTGTCTGGCTCATATCCTCAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR GCA 90 bp | GGTGGGTGTGGCATTCTCAAGTCCCCTGGACTTATCACTAGATGTCAGTTTGGGCGCAGAACAGGAAGATaGCCAGGGGCACATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGCGILKSPGLITRCQFGRRTGR*PGAHQG Trigger: TCCCTGATGTGCCCCTGGGCATCTTCCTGTTCTGCG...CCCAAACTGACATCTAGTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR GCA 90 bp | TACAGGAATGGGCAAACAGACTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGGAATTGTGGCCCATATaGACCCAGGGCAGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: YRNGQTDWQSRQGSSVLLELWPI*TQGSHK Trigger: CTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTC...CAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGCAACCTGGAACAATCTaGTATGTGCTGTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQQPGTI*YVLSRP Trigger: TGGCCTGGACAGCACATACCAGATTGTTCCAGGTTG...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGTGGATTCAGCAGATGTaGGAAGTGGAAGGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQWIQQM*EVEGIA Trigger: GGCTATGCCTTCCACTTCCCACATCTGCTGAATCCA...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGAGGATATGAGCCAGACAGGAGACATGCAGGAAGAGTaGATGGTGAGCAAACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LAVPPGKLCTFEDMSQTGDMQEE*MVSKPE Trigger: CTCTGGTTTGCTCACCATTCACTCTTCCTGCATGTC...TCCTGTCTGGCTCATATCCTCAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR GCA 90 bp | AGGTCTCAACCACCCAGCCTTTCTTTGGTTGGTCACACACTGGCTGGCCAGCAGAAGGGCACTGAAATCTaGATGAGGTGGAAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQPPSLSLVGHTLAGQQKGTEI*MRWKMA Trigger: AGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTT...CTGCTGGCCAGCCAGTGTGTGACCAACCAAAGAAAGGCTGGGTGGTTGAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTCAAGAGCTGGGACTGTaGCTCAGGTTCACTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TPKSQSVQSLLLCVITWLQELGL*LRFTLV Trigger: GACCAGAGTGAACCTGAGGCACAGTCCCAGCTCTTG...AAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCCACAGATGTCCAGGATaGGGAGTGTGGCCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGHRCPG*GVWPRW Trigger: CCATCGTGGCCACACTCCTCATCCTGGACATCTGTG...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TACAGGAATGGGCAAACAGACTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGTGGATTCAGCAGATGTaGGAAGTGGAAGGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRNGQTDWQSRQGSSVLLWIQQM*EVEGIA Trigger: GGCTATGCCTTCCACTTCCCACATCTGCTGAATCCA...CAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TTGGGCCCTGGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTGTACTGACTGGACCAAATTGCACAGCTaGCTGCAGTGTTTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGPGLTDPESCLFSCTDWTKLHS*LQCFCL Trigger: CAGACAGAAACACTGCAGCCAGCTGTGCAATTTGGT...CCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTAAACTGCTGTTCTGGTaGGATCTCTGTGTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPKSQSVQSLLLCVITWLKLLFW*DLCVGH Trigger: GTGACCCACACAGAGATCTCACCAGAACAGCAGTTT...AAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAGGCCCCGTAGGACTTaGAGGCCTGCCAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSRPRRT*RPARAR Trigger: CCTTGCCCTGGCAGGCCTTCAAGTCCTACGGGGCCT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAGGCCCCGTAGGACTTaGAGGCCTGCCAGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVRPRRT*RPARAR Trigger: CCTTGCCCTGGCAGGCCTTCAAGTCCTACGGGGCCT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | TACAGGAATGGGCAAACAGACTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGGAAGGAGCCGAAGTATaGCAAGAATTGTGGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: YRNGQTDWQSRQGSSVLLEGAEV*QELWPI Trigger: TATGGGCCACAATTCTTGGCATACTTCGGCTCCTTC...CAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCCTCCATGTCGTGAGCTaGAGACTCCCTTTGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGLHVVS*RLPLAH Trigger: ATGGGCCAAAGGGAGTCTCCAGCTCACGACATGGAG...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TACAGGAATGGGCAAACAGACTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGACCAAATTGCACAGCTaGCTGCAGTGTTTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRNGQTDWQSRQGSSVLLTKLHS*LQCFCL Trigger: CAGACAGAAACACTGCAGCCAGCTGTGCAATTTGGT...CAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAGTCTGTTTGCCCATTCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| 3UTR CAA 72 bp | ACCTACACAAATGGAAGCAGCTCTGATGGCCAGGTCTaGCTGGAGGCACCAGGTTCACAGAACGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TYTNGSSSDGQV*LEAPGSQNERK Trigger: TTTTCTCTCGTTCTGTGAACCTGGTGCCTCCAGCAAGACCTGGCCATCAGAGCTGCTTCCATTTGTGTAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR TCA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCGTAGCCTTGCTGATGTaGGGGAGGAAGATGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGVALLM*GRKMTV Trigger: GACTGTCATCTTCCTCCCTCACATCAGCAAGGCTAC...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | ACCCCCAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTGAATGCAAAGGGCACTaGAATCTGCATGAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TPKSQSVQSLLLCVITWLECKGH*NLHEVE Trigger: TTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTC...AAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTGCAAACATGAAAGCATaGTCCTGCCCACCAAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPKSQSVQSLLLCVITWLANMKA*SCPPNC Trigger: GCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGC...AAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAAGCCCAGCATGCGGTaGGAGCTCTGTGTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSKPSMR*ELCVPS Trigger: GGAGGGGACACAGAGCTCCCACCGCATGCTGGGCTT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAAGCCCAGCATGCGGTaGGAGCTCTGTGTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVKPSMR*ELCVPS Trigger: GGAGGGGACACAGAGCTCCCACCGCATGCTGGGCTT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCCAGAAATCAAACTCAGGTCATTAGGTTTGGTGGCAAGTACCTATGCAAGCCCAGCATGCGGTaGGAGCTCTGTGTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFSRNQTQVIRFGGKYLCKPSMR*ELCVPS Trigger: GGAGGGGACACAGAGCTCCCACCGCATGCTGGGCTT...GCATAGGTACTTGCCACCAAACCTAATGACCTGAGTTTGATTTCTGGAAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR CCA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCCGCTCAAGTTCATCATaGGGTTGCCGGGCAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGRSSSS*GCRAKA Trigger: AGCTTTTGCCCGGCAACCCCATGATGAACTTGAGCG...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR GCA 90 bp | CGTGTATACAGGTGCTCATATCTACAGTGTGCATGTGATGGACAGAGGGCAACTGATGATGGACAGCAGTaGATCACTGAAGCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVYRCSYLQCACDGQRATDDGQQ*ITEAQH Trigger: ATGCTGGGCTTCAGTGATGCACTGCTGTCCATCATC...AGTTGCCCTCTGTCCATCACATGCACACTGTAGATATGAGCACCTGTATACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR GCA 90 bp | AAGTCTGCTTGGCTACATGCTTGCCATTCAGCACTCTGCTCTGTATTTAGTTTACGCAGAACAGGAAGATaGCCAGGGGCACATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSAWLHACHSALCSVFSLRRTGR*PGAHQG Trigger: TCCCTGATGTGCCCCTGGGCATCTTCCTGTTCTGCG...TAAACTAAATACAGAGCAGAGTGCTGAATGGCAAGCATGTAGCCAAGCAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGTGGTCTTGTTGGGGATaGTGTGGCCAGAGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVWSCWG*CGQRPR Trigger: ACGGGGCCTCTGGCCACACCATCCCCAACAAGACCA...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAAGGGCTCCATGTCGTaGGCTGGAGACTCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSKGSMS*AGDSLW Trigger: CCAAAGGGAGTCTCCAGCTCACGACATGGAGCCCTT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCACAGATGTCCAGGATaGGGAGTGTGGCCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVHRCPG*GVWPRW Trigger: CCATCGTGGCCACACTCCTCATCCTGGACATCTGTG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCGCAGAACAGGAAGATaGCCAGGGGCACATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVRRTGR*PGAHQG Trigger: TCCCTGATGTGCCCCTGGGCATCTTCCTGTTCTGCG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | TATTTAGTTTATAAAGTCTCTGGGTTCCCTGGGTCCTACCCACTCAGCTGGTATCCTGCACAGATCCAATaGCGATCACACACACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLVYKVSGFPGSYPLSWYPAQIQ*RSHTRR Trigger: TCTGCGTGTGTGTGATCGCCATTGGATCTGTGCAGG...ATACCAGCTGAGTGGGTAGGACCCAGGGAACCCAGAGACTTTATAAACTAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR TCA 90 bp | TGTGCATGTGATGGACAGAGGGCAACTTTCAAGAATCAGTTCTCTCCTTTTACCAAACTGCTGTTCTGGTaGGATCTCTGTGTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CACDGQRATFKNQFSPFTKLLFW*DLCVGH Trigger: GTGACCCACACAGAGATCTCACCAGAACAGCAGTTT...GGTAAAAGGAGAGAACTGATTCTTGAAAGTTGCCCTCTGTCCATCACATGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATTCCCCTGGAGGAAGAGTGAATGGTaGGCAAACCAGAGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSSKWLVQVNQTDKFPWRKSEW*ANQRRP Trigger: GGGTCTCCTCTGGTTTGCTCACCATTCACTCTTCCT...CCAGGGGAATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR GCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAATTGTGGCCCATATaGACCCAGGGCAGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSELWPI*TQGSHK Trigger: CTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTC...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTCAAGAGCTGGGACTGTaGCTCAGGTTCACTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSQELGL*LRFTLV Trigger: GACCAGAGTGAACCTGAGGCACAGTCCCAGCTCTTG...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | ATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATTCCCCTGGCCTGCACAGATCCAATaGCGATCACACACACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISSSKWLVQVNQTDKFPWPAQIQ*RSHTRR Trigger: TCTGCGTGTGTGTGATCGCCATTGGATCTGTGCAGG...CCAGGGGAATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCTCCATGTCGTGAGCTaGAGACTCCCTTTGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVLHVVS*RLPLAH Trigger: ATGGGCCAAAGGGAGTCTCCAGCTCACGACATGGAG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAGAGGAGACCCACTGTaGCGAAGGAGCCGAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSRGDPL*RRSRSM Trigger: CATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAGAGGAGACCCACTGTaGCGAAGGAGCCGAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVRGDPL*RRSRSM Trigger: CATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTCCTTTGAAACCTCTCTTGAAACCCTCTTAGACCCAATACGTCTGGATCGCTCAAGTTCATCATaGGGTTGCCGGGCAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPSFETSLETLLDPIRLDRSSSS*GCRAKA Trigger: AGCTTTTGCCCGGCAACCCCATGATGAACTTGAGCG...ATCCAGACGTATTGGGTCTAAGAGGGTTTCAAGAGAGGTTTCAAAGGAAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCAAAGGCCAGCAGGCTaGCACAGGGATACAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVQRPAG*HRDTVQ Trigger: TTGCACTGTATCCCTGTGCCAGCCTGCTGGCCTTTG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTCAAAGGCCAGCAGGCTaGCACAGGGATACAGTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSQRPAG*HRDTVQ Trigger: TTGCACTGTATCCCTGTGCCAGCCTGCTGGCCTTTG...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | CAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATTGGTCTTGTTGGGGATaGTGTGGCCAGAGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTRSQAQSGLFRLIRQINWSCWG*CGQRPR Trigger: ACGGGGCCTCTGGCCACACCATCCCCAACAAGACCA...ATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGGTAGCCTTGCTGATGTaGGGGAGGAAGATGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVVALLM*GRKMTV Trigger: GACTGTCATCTTCCTCCCTCACATCAGCAAGGCTAC...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAAAAGGGCTCCATGTCGTaGGCTGGAGACTCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SNKISSSKWLVQVNQTDKKGSMS*AGDSLW Trigger: CCAAAGGGAGTCTCCAGCTCACGACATGGAGCCCTT...TTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAGGAAGAGTGAATGGTaGGCAAACCAGAGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSRKSEW*ANQRRP Trigger: GGGTCTCCTCTGGTTTGCTCACCATTCACTCTTCCT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | CAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATCGCAGAACAGGAAGATaGCCAGGGGCACATCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTRSQAQSGLFRLIRQINRRTGR*PGAHQG Trigger: TCCCTGATGTGCCCCTGGGCATCTTCCTGTTCTGCG...ATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCCTGCACAGATCCAATaGCGATCACACACACGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVPAQIQ*RSHTRR Trigger: TCTGCGTGTGTGTGATCGCCATTGGATCTGTGCAGG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTCGCTCAAGTTCATCATaGGGTTGCCGGGCAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSRSSSS*GCRAKA Trigger: AGCTTTTGCCCGGCAACCCCATGATGAACTTGAGCG...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGGCCTCAGGTTCACTCTaGTCTTGTTGGGGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVASGSL*SCWGWC Trigger: ACACCATCCCCAACAAGACCAGAGTGAACCTGAGGC...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| 3UTR CAA 72 bp | CTGCTGCCTCAAACAAGATCTCAAGCTCAAAGTGGCTaGTTCAGGTTAATCAGACAGATAAATTCCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPQTRSQAQSG*FRLIRQINSPG Trigger: GCCAGGGGAATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTGAGGCAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAAACTGCTGTTCTGGTaGGATCTCTGTGTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSKLLFW*DLCVGH Trigger: GTGACCCACACAGAGATCTCACCAGAACAGCAGTTT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCACCATCAGCAGGTATaGCAAGGGGAAGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVHHQQV*QGEEEE Trigger: CTCTTCTTCTTCCCCTTGTCATACCTGCTGATGGTG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
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| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTCACCATCAGCAGGTATaGCAAGGGGAAGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSHHQQV*QGEEEE Trigger: CTCTTCTTCTTCCCCTTGTCATACCTGCTGATGGTG...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | AGTAAATGGGTAAAAACAATAAATTCAGTTCCGATGAAACCCTTCACTGCAAAGAAGGGCTCCATGTCGTaGGCTGGAGACTCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKWVKTINSVPMKPFTAKKGSMS*AGDSLW Trigger: CCAAAGGGAGTCTCCAGCTCACGACATGGAGCCCTT...CTTTGCAGTGAAGGGTTTCATCGGAACTGAATTTATTGTTTTTACCCATTTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTCCACAAGGCTGCCACTaGATTTCTCTTGCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSPQGCH*ISLAHP Trigger: AGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGG...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGACATGCAGGAAGAGTaGATGGTGAGCAAACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSDMQEE*MVSKPE Trigger: CTCTGGTTTGCTCACCATTCACTCTTCCTGCATGTC...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGATGATGGACAGCAGTaGATCACTGAAGCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSDDGQQ*ITEAQH Trigger: ATGCTGGGCTTCAGTGATGCACTGCTGTCCATCATC...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGGATGATGGACAGCAGTaGATCACTGAAGCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVDDGQQ*ITEAQH Trigger: ATGCTGGGCTTCAGTGATGCACTGCTGTCCATCATC...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | CAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATGAATTGTGGCCCATATaGACCCAGGGCAGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTRSQAQSGLFRLIRQINELWPI*TQGSHK Trigger: CTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTC...ATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGTGGATTCAGCAGATGTaGGAAGTGGAAGGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVWIQQM*EVEGIA Trigger: GGCTATGCCTTCCACTTCCCACATCTGCTGAATCCA...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | TGGACAGAGGGCAACTTTCAAGAATCAGTTCTCTCCTTTTACCATGTATTTTCCTGGATTCAGCAGATGTaGGAAGTGGAAGGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WTEGNFQESVLSFYHVFSWIQQM*EVEGIA Trigger: GGCTATGCCTTCCACTTCCCACATCTGCTGAATCCA...GGAAAATACATGGTAAAAGGAGAGAACTGATTCTTGAAAGTTGCCCTCTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGGCTGGAGACTCCCTTTaGCCCATCAACTTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVAGDSL*PINLSL Trigger: CAAAGACAAGTTGATGGGCCAAAGGGAGTCTCCAGC...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | TCAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAAAGAGGAGACCCACTGTaGCGAAGGAGCCGAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SNKISSSKWLVQVNQTDKRGDPL*RRSRSM Trigger: CATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCT...TTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTTCATACAGGCCAGGTTaGGCAAGGCAAGTGTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSSYRPG*ARQVYH Trigger: ATGATACACTTGCCTTGCTCAACCTGGCCTGTATGA...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAATGCAAAGGGCACTaGAATCTGCATGAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSECKGH*NLHEVE Trigger: TTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTC...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAAGGAGCCGAAGTATaGCAAGAATTGTGGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSEGAEV*QELWPI Trigger: TATGGGCCACAATTCTTGGCATACTTCGGCTCCTTC...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGGAAGGAGCCGAAGTATaGCAAGAATTGTGGCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVEGAEV*QELWPI Trigger: TATGGGCCACAATTCTTGGCATACTTCGGCTCCTTC...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCAAACATGAAAGCATaGTCCTGCCCACCAAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSANMKA*SCPPNC Trigger: GCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGC...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR GCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAAGGGCACTGAAATCTaGATGAGGTGGAAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVKGTEI*MRWKMA Trigger: AGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTACCAAATTGCACAGCTaGCTGCAGTGTTTCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSTKLHS*LQCFCL Trigger: CAGACAGAAACACTGCAGCCAGCTGTGCAATTTGGT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR TCA 90 bp | TCAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAACACCATCAGCAGGTATaGCAAGGGGAAGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNKISSSKWLVQVNQTDKHHQQV*QGEEEE Trigger: CTCTTCTTCTTCCCCTTGTCATACCTGCTGATGGTG...TTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | TCAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAACCACAAGGCTGCCACTaGATTTCTCTTGCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNKISSSKWLVQVNQTDKPQGCH*ISLAHP Trigger: AGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGG...TTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATGATGATGGACAGCAGTaGATCACTGAAGCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTRSQAQSGLFRLIRQINDDGQQ*ITEAQH Trigger: ATGCTGGGCTTCAGTGATGCACTGCTGTCCATCATC...ATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCTGCTTGGCTACATGCTTGCCATTCAGCACTCTGCTCTGTATTTAGTTTACTATGTGTAGAGCACTaGATTTGTGGATTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSAWLHACHSALCSVFSLLCVEH*ICGFSR Trigger: TCTGCTGAATCCACAAATCCAGTGCTCTACACATAG...TAAACTAAATACAGAGCAGAGTGCTGAATGGCAAGCATGTAGCCAAGCAGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR CCA 90 bp | AGTAAATGGGTAAAAACAATAAATTCAGTTCCGATGAAACCCTTCACTGCAAAGGCCTCAGGTTCACTCTaGTCTTGTTGGGGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKWVKTINSVPMKPFTAKASGSL*SCWGWC Trigger: ACACCATCCCCAACAAGACCAGAGTGAACCTGAGGC...CTTTGCAGTGAAGGGTTTCATCGGAACTGAATTTATTGTTTTTACCCATTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATTCATACAGGCCAGGTTaGGCAAGGCAAGTGTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTRSQAQSGLFRLIRQINSYRPG*ARQVYH Trigger: ATGATACACTTGCCTTGCTCAACCTGGCCTGTATGA...ATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | AGTAAATGGGTAAAAACAATAAATTCAGTTCCGATGAAACCCTTCACTGCAAAGCCACAAGGCTGCCACTaGATTTCTCTTGCACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKWVKTINSVPMKPFTAKPQGCH*ISLAHP Trigger: AGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGG...CTTTGCAGTGAAGGGTTTCATCGGAACTGAATTTATTGTTTTTACCCATTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR GCA 90 bp | TCAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAAGCAAACATGAAAGCATaGTCCTGCCCACCAAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNKISSSKWLVQVNQTDKANMKA*SCPPNC Trigger: GCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGC...TTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR GCA 90 bp | TCAAACAAGATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAAAAGGGCACTGAAATCTaGATGAGGTGGAAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNKISSSKWLVQVNQTDKKGTEI*MRWKMA Trigger: AGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTT...TTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGATCTTGTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCTATGTGTAGAGCACTaGATTTGTGGATTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVLCVEH*ICGFSR Trigger: TCTGCTGAATCCACAAATCCAGTGCTCTACACATAG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTCTATGTGTAGAGCACTaGATTTGTGGATTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSLCVEH*ICGFSR Trigger: TCTGCTGAATCCACAAATCCAGTGCTCTACACATAG...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | AGTAAATGGGTAAAAACAATAAATTCAGTTCCGATGAAACCCTTCACTGCAAAGGCTGGAGACTCCCTTTaGCCCATCAACTTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKWVKTINSVPMKPFTAKAGDSL*PINLSL Trigger: CAAAGACAAGTTGATGGGCCAAAGGGAGTCTCCAGC...CTTTGCAGTGAAGGGTTTCATCGGAACTGAATTTATTGTTTTTACCCATTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR TCA 90 bp | AGTAAATGGGTAAAAACAATAAATTCAGTTCCGATGAAACCCTTCACTGCAAAGGAATGCAAAGGGCACTaGAATCTGCATGAGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKWVKTINSVPMKPFTAKECKGH*NLHEVE Trigger: TTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTC...CTTTGCAGTGAAGGGTTTCATCGGAACTGAATTTATTGTTTTTACCCATTTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | ATCTCAAGCTCAAAGTGGCTTGTTCAGGTTAATCAGACAGATAAATTCCCCTGGATTTTTCCAACAACCTaGAACAATCTGGTATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSSKWLVQVNQTDKFPWIFPTT*NNLVCA Trigger: AGCACATACCAGATTGTTCCAGGTTGTTGGAAAAAT...CCAGGGGAATTTATCTGTCTGATTAACCTGAACAAGCCACTTTGAGCTTGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGAAATCAAACTCAGGTCATTAGGTTTGGTGGCAAGTACCTATGCCAACATTTTTCCAACAACCTaGAACAATCTGGTATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPEIKLRSLGLVASTYANIFPTT*NNLVCA Trigger: AGCACATACCAGATTGTTCCAGGTTGTTGGAAAAAT...GTTGGCATAGGTACTTGCCACCAAACCTAATGACCTGAGTTTGATTTCTGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR GCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGATACTTTTGTCAAACTaGTGTTCTGGTGAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVILLSN*CSGEIS Trigger: AGAGATCTCACCAGAACAGCAGTTTGACAAAAGTAT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGATTTTTCCAACAACCTaGAACAATCTGGTATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIFHNVNNTQANISTAPVIFPTT*NNLVCA Trigger: AGCACATACCAGATTGTTCCAGGTTGTTGGAAAAAT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTATTTTTCCAACAACCTaGAACAATCTGGTATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDISQCKQYPGQYIHSPSIFPTT*NNLVCA Trigger: AGCACATACCAGATTGTTCCAGGTTGTTGGAAAAAT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CCA 90 bp | AGTAAATGGGTAAAAACAATAAATTCAGTTCCGATGAAACCCTTCACTGCAAAGCTATGTGTAGAGCACTaGATTTGTGGATTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKWVKTINSVPMKPFTAKLCVEH*ICGFSR Trigger: TCTGCTGAATCCACAAATCCAGTGCTCTACACATAG...CTTTGCAGTGAAGGGTTTCATCGGAACTGAATTTATTGTTTTTACCCATTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS TCA 90 bp | GACACGCACACGCTCAAGTTCATCATGGGGTTGCCGGGCAAAAGCTaGGGTCTGCTGGTAGGCCAGAGGAAGGCCACCCACAAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DTHTLKFIMGLPGKS*GLLVGQRKATHKGQ Trigger: CTGGCCTTTGTGGGTGGCCTTCCTCTGGCCTACCAGCAGACCTCAGCTTTTGCCCGGCAACCCCATGATGAACTTGAGCGTGTGCGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 90 bp | GTGGGTCACAGGCAGGATCATGACAGTGGCGATGATGGACAGCAGTaGATCACTGAAGCCCAGCATGCGGTGGGAGCTCTGTGTCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGHRQDHDSGDDGQQ*ITEAQHAVGALCPL Trigger: GAGGGGACACAGAGCTCCCACCGCATGCTGGGCTTCAGTGATGCACTGCTGTCCATCATCGCCACTGTCATGATCCTGCCTGTGACCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||
| CDS GCA 90 bp | GTGAGCAAACCAGAGGAGACCCACTGTGGCGAAGGAGCCGAAGTATaGCAAGAATTGTGGCCCATATGCACCCAGGGCAGCCACAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSKPEETHCGEGAEV*QELWPICTQGSHKA Trigger: AGCCTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTCTTGGCATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCTGGTTTGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 90 bp | GTGGCGATGATGGACAGCAGTGCATCACTGAAGCCCAGCATGCGGTaGGAGCTCTGTGTCCCCTCCTCATTTCTCCTGTGTAGGGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VAMMDSSASLKPSMR*ELCVPSSFLLCRDE Trigger: CTCATCCCTACACAGGAGAAATGAGGAGGGGACACAGAGCTCCCACCGCATGCTGGGCTTCAGTGATGCACTGCTGTCCATCATCGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||
| CDS CCA 90 bp | GAGGGGCGCATGCAGGTCAATACTGAAGGGCTCCATGTCGTGAGCTaGAGACTCCCTTTGGCCCATCAACTTGTCTTTGCACCAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EGRMQVNTEGLHVVS*RLPLAHQLVFAPGG Trigger: ACCACCTGGTGCAAAGACAAGTTGATGGGCCAAAGGGAGTCTCCAGCTCACGACATGGAGCCCTTCAGTATTGACCTGCATGCGCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 90 bp | GAGGAGACCCACTGTGGCGAAGGAGCCGAAGTATGCCAAGAATTGTaGCCCATATGCACCCAGGGCAGCCACAAGGCTGCCACTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: EETHCGEGAEVCQEL*PICTQGSHKAATEF Trigger: AAATTCAGTGGCAGCCTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTCTTGGCATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 90 bp | CCCATGGTCTGTGTAGCCTTCCGGACATGCAGGAAGAGTGAATGGTaGGCAAACCAGAGGAGACCCACTGTGGCGAAGGAGCCGAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PMVCVAFRTCRKSEW*ANQRRPTVAKEPKY Trigger: ATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCTGGTTTGCTCACCATTCACTCTTCCTGCATGTCCGGAAGGCTACACAGACCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | CTAGCCCCAGGCCTGGCTCGGGGAAGACTATGTGGGAAGTCTCCTGTGATGAGTCATAGCCCACAATCATaGCCTGCACAGATCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: LAPGLARGRLCGKSPVMSHSPQS*PAQIQW Trigger: CCATTGGATCTGTGCAGGCAATGATTGTGGGCTATG...ACTCATCACAGGAGACTTCCCACATAGTCTTCCCCGAGCCAGGCCTGGGGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS TCA 90 bp | TGCTCCTGCCCACCAAATTGCACAGCTGGCTGCAGTGTTTCTGTCTaGTGCAGCAGGGCTGTAGTCCAGATGGCAAACTGGAAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSCPPNCTAGCSVSV*CSRAVVQMANWKML Trigger: CAGCATCTTCCAGTTTGCCATCTGGACTACAGCCCTGCTGCATCAGACAGAAACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | TTGGGCCCTGGCCTAACAGATCCAGAAAGCTGCCTGTTCTCCTGTACTGACTGGCCCATCAACTTGTCTTaGCACCAGGTGGTAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGPGLTDPESCLFSCTDWPINLS*HQVVAL Trigger: CAAGGCTACCACCTGGTGCAAAGACAAGTTGATGGG...CCAGTCAGTACAGGAGAACAGGCAGCTTTCTGGATCTGTTAGGCCAGGGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGAGGATATGAGCCAGACAGGACCCATCAACTTGTCTTaGCACCAGGTGGTAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAVPPGKLCTFEDMSQTGPINLS*HQVVAL Trigger: CAAGGCTACCACCTGGTGCAAAGACAAGTTGATGGG...TCCTGTCTGGCTCATATCCTCAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGTCCCGCCAGGGAAGCTCTGTACTTTTGAGGATATGAGCCAGACAGGAGCCACTGAATTTCTCTaGCACATCCTTGGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LAVPPGKLCTFEDMSQTGATEFL*HILGIR Trigger: CCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGC...TCCTGTCTGGCTCATATCCTCAAAAGTACAGAGCTTCCCTGGCGGGACTGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CAA 90 bp | GGTGGGTGTGGCATTCTCAAGTCCCCTGGACTTATCACTAGATGTCAGTTTGGGCTCCTGCCCACCAAATaGCACAGCTGGCTGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGCGILKSPGLITRCQFGLLPTK*HSWLQC Trigger: ACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAG...CCCAAACTGACATCTAGTGATAAGTCCAGGGGACTTGAGAATGCCACACCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS TCA 90 bp | TGGCCCATCAACTTGTCTTTGCACCAGGTGGTAGCCTTGCTGATGTaGGGGAGGAAGATGACAGTCACCATCAGCAGGTATGACAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WPINLSLHQVVALLM*GRKMTVTISRYDKG Trigger: CCCCTTGTCATACCTGCTGATGGTGACTGTCATCTTCCTCCCTCACATCAGCAAGGCTACCACCTGGTGCAAAGACAAGTTGATGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 90 bp | AGAATTGTGGCCCATATGCACCCAGGGCAGCCACAAGGCTGCCACTaGATTTCTCTTGCACATCCTTGGGATCCGGAACATTGTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RIVAHMHPGQPQGCH*ISLAHPWDPEHCPH Trigger: GTGAGGACAATGTTCCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 90 bp | GGCAAGGCGTACAAGGAGACGGAGCAACAGGAATGCAAAGGGCACTaGAATCTGCATGAGGTGGAAGATGGCTGTGCTGAAACGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GKAYKETEQQECKGH*NLHEVEDGCAETTQ Trigger: CTGAGTCGTTTCAGCACAGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTCCTGTTGCTCCGTCTCCTTGTACGCCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 90 bp | CATGCAGGAAGAGTGAATGGTGAGCAAACCAGAGGAGACCCACTGTaGCGAAGGAGCCGAAGTATGCCAAGAATTGTGGCCCATATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HAGRVNGEQTRGDPL*RRSRSMPRIVAHMH Trigger: GTGCATATGGGCCACAATTCTTGGCATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCTGGTTTGCTCACCATTCACTCTTCCTGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 90 bp | AGACGGAGCAACAGGAATGCAAAGGGCACTGAAATCTGCATGAGGTaGAAGATGGCTGTGCTGAAACGACTCAGTAGGCAGGTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSNRNAKGTEICMR*KMAVLKRLSRQVAA Trigger: TGCTGCCACCTGCCTACTGAGTCGTTTCAGCACAGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTCCTGTTGCTCCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 90 bp | CGTACAAGGAGACGGAGCAACAGGAATGCAAAGGGCACTGAAATCTaGATGAGGTGGAAGATGGCTGTGCTGAAACGACTCAGTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTRRRSNRNAKGTEI*MRWKMAVLKRLSRQ Trigger: CTGCCTACTGAGTCGTTTCAGCACAGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTCCTGTTGCTCCGTCTCCTTGTACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCCTCCTGCCCACCAAATaGCACAGCTGGCTGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGLLPTK*HSWLQC Trigger: ACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAG...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTGTGGAAGGTTCACTCTGGTCTaGTTGGGGATGGTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QKPVSAEPSPVCHYLACGRFTLV*LGMVWP Trigger: TGGCCACACCATCCCCAACAAGACCAGAGTGAACCT...TCCACAAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CAA 90 bp | GCTGACTCTTGTCTTTGTCTAACAACTGGTACAGGAATGGGCAAACAGACTGGCGCCACTGAATTTCTCTaGCACATCCTTGGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ADSCLCLTTGTGMGKQTGATEFL*HILGIR Trigger: CCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGC...GCCAGTCTGTTTGCCCATTCCTGTACCAGTTGTTAGACAAAGACAAGAGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CAA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCTCCTGCCCACCAAATaGCACAGCTGGCTGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LIFHNVNNTQANISTAPVLLPTK*HSWLQC Trigger: ACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAG...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTTTCACTCTGGTCTTGTaGGGGATGGTGTGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDISQCKQYPGQYIHSPSFTLVL*GMVWPE Trigger: CTCTGGCCACACCATCCCCAACAAGACCAGAGTGAA...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAGGTTCACTCTGGTCTaGTTGGGGATGGTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LDISQCKQYPGQYIHSPSRFTLV*LGMVWP Trigger: TGGCCACACCATCCCCAACAAGACCAGAGTGAACCT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAGGTTCACTCTGGTCTaGTTGGGGATGGTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIFHNVNNTQANISTAPVRFTLV*LGMVWP Trigger: TGGCCACACCATCCCCAACAAGACCAGAGTGAACCT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTCCCATCAACTTGTCTTaGCACCAGGTGGTAGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LDISQCKQYPGQYIHSPSPINLS*HQVVAL Trigger: CAAGGCTACCACCTGGTGCAAAGACAAGTTGATGGG...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGCCACTGAATTTCTCTaGCACATCCTTGGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LDISQCKQYPGQYIHSPSATEFL*HILGIR Trigger: CCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGC...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | CAAAAGCCAGTCAGTGCAGAGCCTTCTCCTGTGTGTCATTACTTGGCTTGTGGAAGTTTCTGTATACTTTaGTCAAACTGCTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QKPVSAEPSPVCHYLACGSFCIL*SNCCSG Trigger: ACCAGAACAGCAGTTTGACAAAAGTATACAGAAACT...TCCACAAGCCAAGTAATGACACACAGGAGAAGGCTCTGCACTGACTGGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063272.13 |
||
| CDS-3UTR CAA 90 bp | AGTAAATGGGTAAAAACAATAAATTCAGTTCCGATGAAACCCTTCACTGCAAAGTTCACTCTGGTCTTGTaGGGGATGGTGTGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKWVKTINSVPMKPFTAKFTLVL*GMVWPE Trigger: CTCTGGCCACACCATCCCCAACAAGACCAGAGTGAA...CTTTGCAGTGAAGGGTTTCATCGGAACTGAATTTATTGTTTTTACCCATTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTATAAAGTCTCTGGGTTCCCTGGGTCCTACCCACTCAGCTGGTATGTTAGTTTCTGTATACTTTaGTCAAACTGCTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVYKVSGFPGSYPLSWYVSFCIL*SNCCSG Trigger: ACCAGAACAGCAGTTTGACAAAAGTATACAGAAACT...AACATACCAGCTGAGTGGGTAGGACCCAGGGAACCCAGAGACTTTATAAACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146207.6 |
||
| CDS-3UTR CAA 90 bp | TTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTGAGTTTCTGTATACTTTaGTCAAACTGCTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LIFHNVNNTQANISTAPVSFCIL*SNCCSG Trigger: ACCAGAACAGCAGTTTGACAAAAGTATACAGAAACT...CACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS-3UTR CAA 90 bp | CTTGATATTTCACAATGTAAACAATACCCAGGCCAATATATCCACAGCCCCAGTAGTTTCTGTATACTTTaGTCAAACTGCTGTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDISQCKQYPGQYIHSPSSFCIL*SNCCSG Trigger: ACCAGAACAGCAGTTTGACAAAAGTATACAGAAACT...ACTGGGGCTGTGGATATATTGGCCTGGGTATTGTTTACATTGTGAAATATCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 72 bp | TGTTGGGGATGGTGTGGCCAGAGGCCCCGTAGGACTTaGAGGCCTGCCAGGGCAAGGCGTACAAGGAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: CWGWCGQRPRRT*RPARARRTRRR Trigger: CCGTCTCCTTGTACGCCTTGCCCTGGCAGGCCTTCAAGTCCTACGGGGCCTCTGGCCACACCATCCCCAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 72 bp | TCAGGCAAGAGCTGGGACTGTGCCTCAGGTTCACTCTaGTCTTGTTGGGGATGGTGTGGCCAGAGGCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SGKSWDCASGSL*SCWGWCGQRPR Trigger: ACGGGGCCTCTGGCCACACCATCCCCAACAAGACCAGAGTGAACCTGAGGCACAGTCCCAGCTCTTGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 72 bp | CCAGAGGAGACCCACTGTGGCGAAGGAGCCGAAGTATaGCAAGAATTGTGGCCCATATGCACCCAGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PEETHCGEGAEV*QELWPICTQGS Trigger: GCTGCCCTGGGTGCATATGGGCCACAATTCTTGGCATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 72 bp | CACTGTGGCGAAGGAGCCGAAGTATGCCAAGAATTGTaGCCCATATGCACCCAGGGCAGCCACAAGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HCGEGAEVCQEL*PICTQGSHKAA Trigger: GGCAGCCTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTCTTGGCATACTTCGGCTCCTTCGCCACAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CAA 90 bp | CCAGAGGAGACCCACTGTGGCGAAGGAGCCGAAGTATGCCAAGAATaGTGGCCCATATGCACCCAGGGCAGCCACAAGGCTGCCACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PEETHCGEGAEVCQE*WPICTQGSHKAATE Trigger: TTCAGTGGCAGCCTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTCTTGGCATACTTCGGCTCCTTCGCCACAGTGGGTCTCCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 72 bp | AGGCAGGATCATGACAGTGGCGATGATGGACAGCAGTaGATCACTGAAGCCCAGCATGCGGTGGGAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RQDHDSGDDGQQ*ITEAQHAVGAL Trigger: CAGAGCTCCCACCGCATGCTGGGCTTCAGTGATGCACTGCTGTCCATCATCGCCACTGTCATGATCCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||
| CDS GCA 72 bp | GGCAGCAAAGGCCAGCAGGCTGGCACAGGGATACAGTaGAAGCTTGGCAAACATGAAAGCATGCTCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSKGQQAGTGIQ*KLGKHESMLLP Trigger: GGGCAGGAGCATGCTTTCATGTTTGCCAAGCTTGCACTGTATCCCTGTGCCAGCCTGCTGGCCTTTGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CAA 72 bp | ACCCACTGTGGCGAAGGAGCCGAAGTATGCCAAGAATaGTGGCCCATATGCACCCAGGGCAGCCACAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: THCGEGAEVCQE*WPICTQGSHKA Trigger: AGCCTTGTGGCTGCCCTGGGTGCATATGGGCCACAATTCTTGGCATACTTCGGCTCCTTCGCCACAGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 72 bp | TGGGATCCGGAACATTGTCCTCACAGATGTCCAGGATaGGGAGTGTGGCCACGATGGCATAGACACCGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: WDPEHCPHRCPG*GVWPRWHRHRR Trigger: GCGACGGTGTCTATGCCATCGTGGCCACACTCCTCATCCTGGACATCTGTGAGGACAATGTTCCGGATCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 72 bp | GAAGAAGAGGGAAAAGACAGCCGCAACAAAACACAGTaGTGGGCCACGGAGGACCAGGTGCAGGATATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: EEEGKDSRNKTQ*WATEDQVQDMP Trigger: CGGCATATCCTGCACCTGGTCCTCCGTGGCCCAGCACTGTGTTTTGTTGCGGCTGTCTTTTCCCTCTTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||
| CDS CAA 90 bp | GTGGCAGCAAAGGCCAGCAGGCTGGCACAGGGATACAGTGCAAGCTaGGCAAACATGAAAGCATGCTCCTGCCCACCAAATTGCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VAAKASRLAQGYSAS*ANMKACSCPPNCTA Trigger: AGCTGTGCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGCCAAGCTTGCACTGTATCCCTGTGCCAGCCTGCTGGCCTTTGCTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 72 bp | GGCGCATGCAGGTCAATACTGAAGGGCTCCATGTCGTaGGCTGGAGACTCCCTTTGGCCCATCAACTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GACRSILKGSMS*AGDSLWPINLS Trigger: AGACAAGTTGATGGGCCAAAGGGAGTCTCCAGCTCACGACATGGAGCCCTTCAGTATTGACCTGCATGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 72 bp | GCCCATATGCACCCAGGGCAGCCACAAGGCTGCCACTaGATTTCTCTTGCACATCCTTGGGATCCGGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: AHMHPGQPQGCH*ISLAHPWDPEH Trigger: ATGTTCCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGGCTGCCCTGGGTGCATATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS TCA 72 bp | TGTGTAGCCTTCCGGACATGCAGGAAGAGTGAATGGTaGGCAAACCAGAGGAGACCCACTGTGGCGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CVAFRTCRKSEW*ANQRRPTVAKE Trigger: CTCCTTCGCCACAGTGGGTCTCCTCTGGTTTGCTCACCATTCACTCTTCCTGCATGTCCGGAAGGCTACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CAA 90 bp | CCCATATGCACCCAGGGCAGCCACAAGGCTGCCACTGAATTTCTCTaGCACATCCTTGGGATCCGGAACATTGTCCTCACAGATGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PICTQGSHKAATEFL*HILGIRNIVLTDVQ Trigger: CTGGACATCTGTGAGGACAATGTTCCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGGCTGCCCTGGGTGCATATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 72 bp | CATGAAAGCATGCTCCTGCCCACCAAATTGCACAGCTaGCTGCAGTGTTTCTGTCTGATGCAGCAGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HESMLLPTKLHS*LQCFCLMQQGC Trigger: ACAGCCCTGCTGCATCAGACAGAAACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAGCATGCTTTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CAA 72 bp | ACCCAGGGCAGCCACAAGGCTGCCACTGAATTTCTCTaGCACATCCTTGGGATCCGGAACATTGTCCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: TQGSHKAATEFL*HILGIRNIVLT Trigger: TGTGAGGACAATGTTCCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGGCTGCCCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CAA 72 bp | AGAGGAAGGCCACCCACAAAGGCCAGCGATAGTATGTaGAGTAACCCCATGGTCTGTGTAGCCTTCCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RGRPPTKASDSM*SNPMVCVAFRT Trigger: TGTCCGGAAGGCTACACAGACCATGGGGTTACTCAACATACTATCGCTGGCCTTTGTGGGTGGCCTTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CAA 90 bp | CAGTGCAAGCTTGGCAAACATGAAAGCATGCTCCTGCCCACCAAATaGCACAGCTGGCTGCAGTGTTTCTGTCTGATGCAGCAGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QCKLGKHESMLLPTK*HSWLQCFCLMQQGC Trigger: ACAGCCCTGCTGCATCAGACAGAAACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGCCAAGCTTGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 72 bp | CAGGGATACAGTGCAAGCTTGGCAAACATGAAAGCATaGTCCTGCCCACCAAATTGCACAGCTGGCTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QGYSASLANMKA*SCPPNCTAGCS Trigger: ACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGCCAAGCTTGCACTGTATCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 72 bp | AGGCATAGCCCACAATCATTGCCTGCACAGATCCAATaGCGATCACACACACGCAGAACAGGAAGATGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RHSPQSLPAQIQ*RSHTRRTGRCP Trigger: TGGGCATCTTCCTGTTCTGCGTGTGTGTGATCGCCATTGGATCTGTGCAGGCAATGATTGTGGGCTATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||
| CDS CAA 72 bp | GCCACAAGGCTGCCACTGAATTTCTCTTGCACATCCTaGGGATCCGGAACATTGTCCTCACAGATGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ATRLPLNFSCTS*GSGTLSSQMSR Trigger: CCTGGACATCTGTGAGGACAATGTTCCGGATCCCAAGGATGTGCAAGAGAAATTCAGTGGCAGCCTTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 72 bp | AGACGGAGCAACAGGAATGCAAAGGGCACTGAAATCTaGATGAGGTGGAAGATGGCTGTGCTGAAACGACTC | + |
|
Preference number: 6 (lower is better) Translates to: RRSNRNAKGTEI*MRWKMAVLKRL Trigger: GAGTCGTTTCAGCACAGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTCCTGTTGCTCCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 72 bp | ATGCAGGTCAATACTGAAGGGCTCCATGTCGTGAGCTaGAGACTCCCTTTGGCCCATCAACTTGTCTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MQVNTEGLHVVS*RLPLAHQLVFA Trigger: TGCAAAGACAAGTTGATGGGCCAAAGGGAGTCTCCAGCTCACGACATGGAGCCCTTCAGTATTGACCTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CAA 72 bp | CTTGGCAAACATGAAAGCATGCTCCTGCCCACCAAATaGCACAGCTGGCTGCAGTGTTTCTGTCTGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGKHESMLLPTK*HSWLQCFCLMQ Trigger: CTGCATCAGACAGAAACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS GCA 72 bp | TACAGTGCAAGCTTGGCAAACATGAAAGCATGCTCCTaGCCACCAAATTGCACAGCTGGCTGCAGTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: YSASLANMKACS*PPNCTAGCSVS Trigger: AGAAACACTGCAGCCAGCTGTGCAATTTGGTGGGCAGGAGCATGCTTTCATGTTTGCCAAGCTTGCACTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 72 bp | AACAGGAATGCAAAGGGCACTGAAATCTGCATGAGGTaGAAGATGGCTGTGCTGAAACGACTCAGTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NRNAKGTEICMR*KMAVLKRLSRQ Trigger: CTGCCTACTGAGTCGTTTCAGCACAGCCATCTTCCACCTCATGCAGATTTCAGTGCCCTTTGCATTCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 |
||
| CDS CCA 72 bp | ATGTGTAGAGCACTGGATTTGTGGATTCAGCAGATGTaGGAAGTGGAAGGCATAGCCCACAATCATTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MCRALDLWIQQM*EVEGIAHNHCL Trigger: CAGGCAATGATTGTGGGCTATGCCTTCCACTTCCCACATCTGCTGAATCCACAAATCCAGTGCTCTACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||
| CDS CAA 72 bp | ACAGCGATCCTAGTTGCTAGGAGTTTCTGTATACTTTaGTCAAACTGCTGTTCTGGTGAGATCTCTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TAILVARSFCIL*SNCCSGEISVW Trigger: CCACACAGAGATCTCACCAGAACAGCAGTTTGACAAAAGTATACAGAAACTCCTAGCAACTAGGATCGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||
| CDS CCA 72 bp | GTGTATCATCTATTTTTCCAACAACCTGGAACAATCTaGTATGTGCTGTCCAGGCCACAGTTACGATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VYHLFFQQPGTI*YVLSRPQLRLE Trigger: TTCTAATCGTAACTGTGGCCTGGACAGCACATACCAGATTGTTCCAGGTTGTTGGAAAAATAGATGATACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000063272.13 ENSMUST00000078323.13 ENSMUST00000120327.3 ENSMUST00000146207.6 |
||