RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TMEM174 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046082

Ensembl transcript IDs: ENSMUST00000050389.5

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACTCTGCTGCGGAAGGTTCAGCGCCGTGCAGGGAAATTTCTACCTaGGCCTGCTCTCTTCCCTGCTTGCTTGCCAGCCTCCCTTTCATC +
Preference number: 1 (lower is better)
Translates to: HSAAEGSAPCREIST*ACSLPCLLASLPFI
Trigger: GATGAAAGGGAGGCTGGCAAGCAAGCAGGGAAGAGAGCAGGCTCAGGTAGAAATTTCCCTGCACGGCGCTGAACCTTCCGCAGCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR GCA 90 bp GGAGCAGGCGCTCACCCATGTACATTACGCCTTGAACTTCAGCCTTaGAAAGGAAAACCATCAGGAGCAGGGGTCACTGTAACTCGGTGG +
Preference number: 1 (lower is better)
Translates to: GAGAHPCTLRLELQP*KGKPSGAGVTVTRW
Trigger: CCACCGAGTTACAGTGACCCCTGCTCCTGATGGTTTTCCTTTGCAAGGCTGAAGTTCAAGGCGTAATGTACATGGGTGAGCGCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR TCA 90 bp CCTGCTCTCTTCCCTGCTTGCTTGCCAGCCTCCCTTTCATCAGTCTaGGAGCTGCCATGGCTGCCGGATTTAAAACTAAGACAATCTTTC +
Preference number: 1 (lower is better)
Translates to: PALFPACLPASLSSV*ELPWLPDLKLRQSF
Trigger: GAAAGATTGTCTTAGTTTTAAATCCGGCAGCCATGGCAGCTCTCAGACTGATGAAAGGGAGGCTGGCAAGCAAGCAGGGAAGAGAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR GCA 90 bp TGTAAAACTGTTTTCTTTCTAATTCTTTGGACACCTCCTAAAGTCTaGAGCTTTGGGCTGTGGTTGGTGACACCGTTCAGACTTAGGAAG +
Preference number: 1 (lower is better)
Translates to: CKTVFFLILWTPPKV*SFGLWLVTPFRLRK
Trigger: CTTCCTAAGTCTGAACGGTGTCACCAACCACAGCCCAAAGCTGCAGACTTTAGGAGGTGTCCAAAGAATTAGAAAGAAAACAGTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR GCA 90 bp CTGTGTTCTGTAAGCCACTCGGCTGAGCTAGTTCGTGCCTGGGAATCACAGCCTGATAAGTCACTCTGCTaGGGAAGGTTCAGCGCCGTG +
Preference number: 2 (lower is better)
Translates to: LCSVSHSAELVRAWESQPDKSLC*GRFSAV
Trigger: CACGGCGCTGAACCTTCCGCAGCAGAGTGACTTATC...AGGCTGTGATTCCCAGGCACGAACTAGCTCAGCCGAGTGGCTTACAGAACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR GCA 90 bp ATCTCCATGATTCATGACTACAAAGCGACACGGCAGCATGGCTCTGTGGAACAGGCCTGCTCTCTTCCCTaGTTGCTTGCCAGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: ISMIHDYKATRQHGSVEQACSLP*LLASLP
Trigger: AGGGAGGCTGGCAAGCAAGCAGGGAAGAGAGCAGGC...CTGTTCCACAGAGCCATGCTGCCGTGTCGCTTTGTAGTCATGAATCATGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR TCA 90 bp TGCTGCGGAAGGTTCAGCGCCGTGCAGGGAAATTTCTACCTGAGCCTGCTCTCTACTTCTTTCCCACCTTaGATGACATCTGTAAGATCT +
Preference number: 2 (lower is better)
Translates to: CCGRFSAVQGNFYLSLLSTSFPP*MTSVRS
Trigger: AGATCTTACAGATGTCATTCAAGGTGGGAAAGAAGT...AGAGAGCAGGCTCAGGTAGAAATTTCCCTGCACGGCGCTGAACCTTCCGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR CCA 90 bp ACAGCACATGGTGACATTCATTATCCTCCTGTTACCTCGTCCACAGTAGGATCGCAAATGGATATCGGGTaGGGGATGGGGAAATGGGTG +
Preference number: 2 (lower is better)
Translates to: TAHGDIHYPPVTSSTVGSQMDIG*GMGKWV
Trigger: CACCCATTTCCCCATCCCCCACCCGATATCCATTTG...CGATCCTACTGTGGACGAGGTAACAGGAGGATAATGAATGTCACCATGTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR CAA 90 bp CTAATTCTTTGGACACCTCCTAAAGTCTGCAGCTTTGGGCTGTGGTaGGTGACACCGTTCAGACTTAGGAAGCTGAAGGCTACCAGCTTT +
Preference number: 2 (lower is better)
Translates to: LILWTPPKVCSFGLW*VTPFRLRKLKATSF
Trigger: AAAGCTGGTAGCCTTCAGCTTCCTAAGTCTGAACGGTGTCACCAACCACAGCCCAAAGCTGCAGACTTTAGGAGGTGTCCAAAGAATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR TCA 90 bp ATCTCCATGATTCATGACTACAAAGCGACACGGCAGCATGGCTCTGTGGAACAGGGATGGGGAAATGGGTaGATTTTCCTCCTGCACTTT +
Preference number: 2 (lower is better)
Translates to: ISMIHDYKATRQHGSVEQGWGNG*IFLLHF
Trigger: AAAGTGCAGGAGGAAAATTCACCCATTTCCCCATCC...CTGTTCCACAGAGCCATGCTGCCGTGTCGCTTTGTAGTCATGAATCATGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR GCA 90 bp GTGACACCGTTCAGACTTAGGAAGCTGAAGGCTACCAGCTTTTCTTTGTTCAAATCTTCCCTGCTTGCTTaGCAGCCTCCCTTTCATCAG +
Preference number: 2 (lower is better)
Translates to: VTPFRLRKLKATSFSLFKSSLLA*QPPFHQ
Trigger: CTGATGAAAGGGAGGCTGGCAAGCAAGCAGGGAAGA...TTTGAACAAAGAAAAGCTGGTAGCCTTCAGCTTCCTAAGTCTGAACGGTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR GCA 90 bp ATCTCCATGATTCATGACTACAAAGCGACACGGCAGCATGGCTCTGTGGAACAGCTTGAACTTCAGCCTTaGAAAGGAAAACCATCAGGA +
Preference number: 2 (lower is better)
Translates to: ISMIHDYKATRQHGSVEQLELQP*KGKPSG
Trigger: TCCTGATGGTTTTCCTTTGCAAGGCTGAAGTTCAAG...CTGTTCCACAGAGCCATGCTGCCGTGTCGCTTTGTAGTCATGAATCATGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR CCA 90 bp TGTAAAACTGTTTTCTTTCTAATTCTTTGGACACCTCCTAAAGTCTGCAGCTTTAAGATATCCTTCAAATaGATATCGGGTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: CKTVFFLILWTPPKVCSFKISFK*ISGGGW
Trigger: CCATCCCCCACCCGATATCCATTTGAAGGATATCTT...AAAGCTGCAGACTTTAGGAGGTGTCCAAAGAATTAGAAAGAAAACAGTTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR TCA 72 bp GGGGGAGACGGGATGACTGATCATCTCCATGATTCATaGCTACAAAGCGACACGGCAGCATGGCTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: GGDGMTDHLHDS*LQSDTAAWLCG
Trigger: TCCACAGAGCCATGCTGCCGTGTCGCTTTGTAGTCATGAATCATGGAGATGATCAGTCATCCCGTCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR-3UTR CAA 90 bp GAGGCATACCTGTGTTCCATAAGCCACTCAGCTGTACCTGTGTTCTGTAAGCCATGCTCTCTTCCCTGCTaGCTTGCCAGCCTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: EAYLCSISHSAVPVFCKPCSLPC*LASLPF
Trigger: GAAAGGGAGGCTGGCAAGCAAGCAGGGAAGAGAGCA...TGGCTTACAGAACACAGGTACAGCTGAGTGGCTTATGGAACACAGGTATGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR TCA 72 bp TTCCCTGCTTGCTTGCCAGCCTCCCTTTCATCAGTCTaGGAGCTGCCATGGCTGCCGGATTTAAAACTAAGA +
Preference number: 3 (lower is better)
Translates to: FPACLPASLSSV*ELPWLPDLKLR
Trigger: TCTTAGTTTTAAATCCGGCAGCCATGGCAGCTCTCAGACTGATGAAAGGGAGGCTGGCAAGCAAGCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR TCA 72 bp AGCAGGGGTCACTGTAACTCGGTGGACAGCACATGGTaGCATTCATTATCCTCCTGTTACCTCGTCCACAGT +
Preference number: 3 (lower is better)
Translates to: SRGHCNSVDSTW*HSLSSCYLVHS
Trigger: ACTGTGGACGAGGTAACAGGAGGATAATGAATGTCACCATGTGCTGTCCACCGAGTTACAGTGACCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR CCA 72 bp TCTTCTGGCTCTAGAGATCAAACCCAAGGCACTGCGTaGGCTCCAAAATCACTCTATCACAGAGCGACTCTC +
Preference number: 3 (lower is better)
Translates to: SSGSRDQTQGTA*APKSLYHRATL
Trigger: GAGAGTCGCTCTGTGATAGAGTGATTTTGGAGCCCACGCAGTGCCTTGGGTTTGATCTCTAGAGCCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR TCA 72 bp CCCACATATAAGCACAGTACCAAAACCTTCAAGACCTaGCAATTCCTGTATCTCTCTTGGGGGCAGCCACCT +
Preference number: 3 (lower is better)
Translates to: PTYKHSTKTFKT*QFLYLSWGQPP
Trigger: AGGTGGCTGCCCCCAAGAGAGATACAGGAATTGTCAGGTCTTGAAGGTTTTGGTACTGTGCTTATATGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR CCA 72 bp TTCATGACTACAAAGCGACACGGCAGCATGGCTCTGTaGAACAGATTAGAGGCATACCTGTGTTCCATAAGC +
Preference number: 3 (lower is better)
Translates to: FMTTKRHGSMAL*NRLEAYLCSIS
Trigger: GCTTATGGAACACAGGTATGCCTCTAATCTGTTCCACAGAGCCATGCTGCCGTGTCGCTTTGTAGTCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR GCA 72 bp GTTTTCTTTCTAATTCTTTGGACACCTCCTAAAGTCTaGAGCTTTGGGCTGTGGTTGGTGACACCGTTCAGA +
Preference number: 3 (lower is better)
Translates to: VFFLILWTPPKV*SFGLWLVTPFR
Trigger: TCTGAACGGTGTCACCAACCACAGCCCAAAGCTGCAGACTTTAGGAGGTGTCCAAAGAATTAGAAAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp TGCTGCGGAAGGTTCAGCGCCGTGCAGGGAAATTTCTACCTGAGCCTGCTCTCTATGGGTCCGAGGAGCTaGGTCCATTCAAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CCGRFSAVQGNFYLSLLSMGPRS*VHSKWE
Trigger: CTCCCACTTTGAATGGACCCAGCTCCTCGGACCCAT...AGAGAGCAGGCTCAGGTAGAAATTTCCCTGCACGGCGCTGAACCTTCCGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR TCA 90 bp CTGTGTTCTGTAAGCCACTCGGCTGAGCTAGTTCGTGCCTGGGAATCACAGCCTTGGAAGGTGATGGGCTaGTTGATGCCAGTGAAAACG +
Preference number: 4 (lower is better)
Translates to: LCSVSHSAELVRAWESQPWKVMG*LMPVKT
Trigger: CGTTTTCACTGGCATCAATCAGCCCATCACCTTCCA...AGGCTGTGATTCCCAGGCACGAACTAGCTCAGCCGAGTGGCTTACAGAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp ACAGCGATAAACTCTCCAAGTATCACATCACAGGGCTTAAATGTCCGTCCCCTTTGTCCTCCGGAAGTCTaGTCCGAGTCCGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: TAINSPSITSQGLNVRPLCPPEV*SESGTL
Trigger: GAGGGTCCCGGACTCGGACCAGACTTCCGGAGGACA...AAGGGGACGGACATTTAAGCCCTGTGATGTGATACTTGGAGAGTTTATCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR CAA 72 bp CAGAGGGAGCAGGCGCTCACCCATGTACATTACGCCTaGAACTTCAGCCTTGCAAAGGAAAACCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: QREQALTHVHYA*NFSLAKENHQE
Trigger: CTCCTGATGGTTTTCCTTTGCAAGGCTGAAGTTCAAGGCGTAATGTACATGGGTGAGCGCCTGCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
3UTR CAA 72 bp TGGACACCTCCTAAAGTCTGCAGCTTTGGGCTGTGGTaGGTGACACCGTTCAGACTTAGGAAGCTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WTPPKVCSFGLW*VTPFRLRKLKA
Trigger: AGCCTTCAGCTTCCTAAGTCTGAACGGTGTCACCAACCACAGCCCAAAGCTGCAGACTTTAGGAGGTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR GCA 90 bp GTGACACCGTTCAGACTTAGGAAGCTGAAGGCTACCAGCTTTTCTTTGTTCAAAGGAGGAGGGATATACTaGACCACGGTGGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VTPFRLRKLKATSFSLFKGGGIY*TTVAPW
Trigger: CCACGGGGCCACCGTGGTGCAGTATATCCCTCCTCC...TTTGAACAAAGAAAAGCTGGTAGCCTTCAGCTTCCTAAGTCTGAACGGTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp GCACATGGTGACATTCATTATCCTCCTGTTACCTCGTCCACAGTAGGATCGGCCCTGAGAAAAGCAAAGTaGCCCCTGCCTTGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: AHGDIHYPPVTSSTVGSALRKAK*PLPCRR
Trigger: ACGACGACAAGGCAGGGGCCACTTTGCTTTTCTCAG...GGCCGATCCTACTGTGGACGAGGTAACAGGAGGATAATGAATGTCACCATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp CTGTGTTCTGTAAGCCACTCGGCTGAGCTAGTTCGTGCCTGGGAATCACAGCCTAAGTGGGAGACACCTTaGTATTTGATCCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: LCSVSHSAELVRAWESQPKWETP*YLIQPM
Trigger: CATGGGCTGGATCAAATACCAAGGTGTCTCCCACTT...AGGCTGTGATTCCCAGGCACGAACTAGCTCAGCCGAGTGGCTTACAGAACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp GAAGAACACAGCGATAAACTCTCCAAGTATCACATCACAGGGCTTAAATGTCCGCGACCGACAGAAGGATaGGTCCGAGGAGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: EEHSDKLSKYHITGLKCPRPTEG*VRGAGS
Trigger: GGACCCAGCTCCTCGGACCCATCCTTCTGTCGGTCG...CGGACATTTAAGCCCTGTGATGTGATACTTGGAGAGTTTATCGCTGTGTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR GCA 90 bp CACAGCGATAAACTCTCCAAGTATCACATCACAGGGCTTAAATGTCCGTCCCCTGCCTGTCATATCCAGTaGCCACGAAAGGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: HSDKLSKYHITGLKCPSPACHIQ*PRKERS
Trigger: GCTTCTCTCCTTTCGTGGGCACTGGATATGACAGGC...AGGGGACGGACATTTAAGCCCTGTGATGTGATACTTGGAGAGTTTATCGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp ACAGCACATGGTGACATTCATTATCCTCCTGTTACCTCGTCCACAGTAGGATCGTGTCTTGAGGGTAGATaGTGTAGTACTGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TAHGDIHYPPVTSSTVGSCLEGR*CSTEGD
Trigger: GTCCCCCTCAGTACTACACCATCTACCCTCAAGACA...CGATCCTACTGTGGACGAGGTAACAGGAGGATAATGAATGTCACCATGTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp TGCAAAGGAAAACCATCAGGAGCAGGGGTCACTGTAACTCGGTGGACAGCACATTATCTCCTCATACGGTaGAGGAGAGAAACATACGCA +
Preference number: 4 (lower is better)
Translates to: CKGKPSGAGVTVTRWTAHYLLIR*RRETYA
Trigger: TGCGTATGTTTCTCTCCTCCACCGTATGAGGAGATA...ATGTGCTGTCCACCGAGTTACAGTGACCCCTGCTCCTGATGGTTTTCCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR TCA 90 bp ACAGCGATAAACTCTCCAAGTATCACATCACAGGGCTTAAATGTCCGTCCCCTTGGCAGGATAGCATTTTaGATTTGCACACAGCGATCA +
Preference number: 4 (lower is better)
Translates to: TAINSPSITSQGLNVRPLGRIAF*ICTQRS
Trigger: TGATCGCTGTGTGCAAATTCAAAATGCTATCCTGCC...AAGGGGACGGACATTTAAGCCCTGTGATGTGATACTTGGAGAGTTTATCGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp ACAGCGATAAACTCTCCAAGTATCACATCACAGGGCTTAAATGTCCGTCCCCTTTGGGTCCATTCAAAGTaGGAGACACCTTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: TAINSPSITSQGLNVRPLWVHSK*ETPWYL
Trigger: CAAATACCAAGGTGTCTCCCACTTTGAATGGACCCA...AAGGGGACGGACATTTAAGCCCTGTGATGTGATACTTGGAGAGTTTATCGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CCA 90 bp TGCAAAGGAAAACCATCAGGAGCAGGGGTCACTGTAACTCGGTGGACAGCACATTTATCTGAGCACAACTaGCAGGATAGCATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: CKGKPSGAGVTVTRWTAHLSEHN*QDSILN
Trigger: ATTCAAAATGCTATCCTGCCAGTTGTGCTCAGATAA...ATGTGCTGTCCACCGAGTTACAGTGACCCCTGCTCCTGATGGTTTTCCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 90 bp CGCAGCATTGTCTTGAGGGTAGATGGTGTAGTACTGAGGGGGACTTaGTGCGGCAGCCGCTGCTCCGCTAGGAGGTATGAGACCGCAAGG +
Preference number: 5 (lower is better)
Translates to: RSIVLRVDGVVLRGT*CGSRCSARRYETAR
Trigger: CCTTGCGGTCTCATACCTCCTAGCGGAGCAGCGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCTCAAGACAATGCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 90 bp AGAAGCCCTCACTCTCCACGAACGCAGCATTGTCTTGAGGGTAGATaGTGTAGTACTGAGGGGGACTTGGTGCGGCAGCCGCTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RSPHSPRTQHCLEGR*CSTEGDLVRQPLLR
Trigger: GCGGAGCAGCGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCTCAAGACAATGCTGCGTTCGTGGAGAGTGAGGGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 90 bp CCTGAGAAAAGCAAAGTGGCCCCTGCCTTGTCGTCGTCGGACACCTaGATGTCGGCGGTACTGGGTGTGTACGGAGTGACAGAGAACACG +
Preference number: 5 (lower is better)
Translates to: PEKSKVAPALSSSDT*MSAVLGVYGVTENT
Trigger: CGTGTTCTCTGTCACTCCGTACACACCCAGTACCGCCGACATCCAGGTGTCCGACGACGACAAGGCAGGGGCCACTTTGCTTTTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CAA 90 bp CTGTGTTCTGTAAGCCACTCGGCTGAGCTAGTTCGTGCCTGGGAATCACAGCCTAAAGTGGCCCCTGCCTaGTCGTCGTCGGACACCTGG +
Preference number: 5 (lower is better)
Translates to: LCSVSHSAELVRAWESQPKVAPA*SSSDTW
Trigger: CCAGGTGTCCGACGACGACAAGGCAGGGGCCACTTT...AGGCTGTGATTCCCAGGCACGAACTAGCTCAGCCGAGTGGCTTACAGAACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS TCA 90 bp GGAGGGATATACTGCACCACGGTGGCCCCGTGGAAGGTGATGGGCTaGTTGATGCCAGTGAAAACGAACGACTGTCCTCCGGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: GGIYCTTVAPWKVMG*LMPVKTNDCPPEVW
Trigger: CCAGACTTCCGGAGGACAGTCGTTCGTTTTCACTGGCATCAATCAGCCCATCACCTTCCACGGGGCCACCGTGGTGCAGTATATCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS GCA 90 bp AGGGTAGATGGTGTAGTACTGAGGGGGACTTGGTGCGGCAGCCGCTaGTCCGCTAGGAGGTATGAGACCGCAAGGATTCATCATGGGTTG +
Preference number: 5 (lower is better)
Translates to: RVDGVVLRGTWCGSR*SARRYETARIHHGL
Trigger: CAACCCATGATGAATCCTTGCGGTCTCATACCTCCTAGCGGAGCAGCGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS GCA 90 bp AGCATTGTCTTGAGGGTAGATGGTGTAGTACTGAGGGGGACTTGGTaGGGCAGCCGCTGCTCCGCTAGGAGGTATGAGACCGCAAGGATT +
Preference number: 5 (lower is better)
Translates to: SIVLRVDGVVLRGTW*GSRCSARRYETARI
Trigger: AATCCTTGCGGTCTCATACCTCCTAGCGGAGCAGCGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCTCAAGACAATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS GCA 90 bp TCCCTTCTAGCTGGTCAGCATCAGAGTCGGGCCTGTCATATCCAGTaGCCACGAAAGGAGAGAAGCCCTCACTCTCCACGAACGCAGCAT +
Preference number: 5 (lower is better)
Translates to: SLLAGQHQSRACHIQ*PRKERSPHSPRTQH
Trigger: ATGCTGCGTTCGTGGAGAGTGAGGGCTTCTCTCCTTTCGTGGGCACTGGATATGACAGGCCCGACTCTGATGCTGACCAGCTAGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 90 bp CCGACCGACAGAAGGATGGGTCCGAGGAGCTGGGTCCATTCAAAGTaGGAGACACCTTGGTATTTGATCCAGCCCATGACAGTGAAAGTG +
Preference number: 5 (lower is better)
Translates to: PTDRRMGPRSWVHSK*ETPWYLIQPMTVKV
Trigger: CACTTTCACTGTCATGGGCTGGATCAAATACCAAGGTGTCTCCCACTTTGAATGGACCCAGCTCCTCGGACCCATCCTTCTGTCGGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 90 bp AGGATGAATGTCACTCCGACCGACAGAAGGATGGGTCCGAGGAGCTaGGTCCATTCAAAGTGGGAGACACCTTGGTATTTGATCCAGCCC +
Preference number: 5 (lower is better)
Translates to: RMNVTPTDRRMGPRS*VHSKWETPWYLIQP
Trigger: GGGCTGGATCAAATACCAAGGTGTCTCCCACTTTGAATGGACCCAGCTCCTCGGACCCATCCTTCTGTCGGTCGGAGTGACATTCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 90 bp GAGAAACATACGCAGTCCTCCTCTTCCAACTCCGTCCCTTCTAGCTaGTCAGCATCAGAGTCGGGCCTGTCATATCCAGTGCCCACGAAA +
Preference number: 5 (lower is better)
Translates to: EKHTQSSSSNSVPSS*SASESGLSYPVPTK
Trigger: TTTCGTGGGCACTGGATATGACAGGCCCGACTCTGATGCTGACCAGCTAGAAGGGACGGAGTTGGAAGAGGAGGACTGCGTATGTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 90 bp GTCTGGTCCGAGTCCGGGACCCTCTCCTCGTTATCTGAGCACAACTaGCAGGATAGCATTTTGAATTTGCACACAGCGATCAGGATGAAT +
Preference number: 5 (lower is better)
Translates to: VWSESGTLSSLSEHN*QDSILNLHTAIRMN
Trigger: ATTCATCCTGATCGCTGTGTGCAAATTCAAAATGCTATCCTGCCAGTTGTGCTCAGATAACGAGGAGAGGGTCCCGGACTCGGACCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CAA 90 bp TGCAAAGGAAAACCATCAGGAGCAGGGGTCACTGTAACTCGGTGGACAGCACATAGGATTCATCATGGGTaGCAGGTAGGTGGCGTTCAT +
Preference number: 5 (lower is better)
Translates to: CKGKPSGAGVTVTRWTAHRIHHG*QVGGVH
Trigger: ATGAACGCCACCTACCTGCAACCCATGATGAATCCT...ATGTGCTGTCCACCGAGTTACAGTGACCCCTGCTCCTGATGGTTTTCCTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CAA 90 bp GAGGCATACCTGTGTTCCATAAGCCACTCAGCTGTACCTGTGTTCTGTAAGCCAGAGACACCTTGGTATTaGATCCAGCCCATGACAGTG +
Preference number: 5 (lower is better)
Translates to: EAYLCSISHSAVPVFCKPETPWY*IQPMTV
Trigger: CACTGTCATGGGCTGGATCAAATACCAAGGTGTCTC...TGGCTTACAGAACACAGGTACAGCTGAGTGGCTTATGGAACACAGGTATGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CAA 90 bp CTGTGTTCTGTAAGCCACTCGGCTGAGCTAGTTCGTGCCTGGGAATCACAGCCTGATAGCATTTTGAATTaGCACACAGCGATCAGGATG +
Preference number: 5 (lower is better)
Translates to: LCSVSHSAELVRAWESQPDSILN*HTAIRM
Trigger: CATCCTGATCGCTGTGTGCAAATTCAAAATGCTATC...AGGCTGTGATTCCCAGGCACGAACTAGCTCAGCCGAGTGGCTTACAGAACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CAA 90 bp GAAGAACACAGCGATAAACTCTCCAAGTATCACATCACAGGGCTTAAATGTCCGGAACGCAGCATTGTCTaGAGGGTAGATGGTGTAGTA +
Preference number: 5 (lower is better)
Translates to: EEHSDKLSKYHITGLKCPERSIV*RVDGVV
Trigger: TACTACACCATCTACCCTCAAGACAATGCTGCGTTC...CGGACATTTAAGCCCTGTGATGTGATACTTGGAGAGTTTATCGCTGTGTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CAA 90 bp GTGACACCGTTCAGACTTAGGAAGCTGAAGGCTACCAGCTTTTCTTTGTTCAAATGGCAGGATAGCATTTaGAATTTGCACACAGCGATC +
Preference number: 5 (lower is better)
Translates to: VTPFRLRKLKATSFSLFKWQDSI*NLHTAI
Trigger: GATCGCTGTGTGCAAATTCAAAATGCTATCCTGCCA...TTTGAACAAAGAAAAGCTGGTAGCCTTCAGCTTCCTAAGTCTGAACGGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS-3UTR CAA 90 bp TGTAAAACTGTTTTCTTTCTAATTCTTTGGACACCTCCTAAAGTCTGCAGCTTTAAAGTGGGAGACACCTaGGTATTTGATCCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: CKTVFFLILWTPPKVCSFKVGDT*VFDPAH
Trigger: ATGGGCTGGATCAAATACCAAGGTGTCTCCCACTTT...AAAGCTGCAGACTTTAGGAGGTGTCCAAAGAATTAGAAAGAAAACAGTTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp AGCAAAGTGGCCCCTGCCTTGTCGTCGTCGGACACCTaGATGTCGGCGGTACTGGGTGTGTACGGAGTGACA +
Preference number: 6 (lower is better)
Translates to: SKVAPALSSSDT*MSAVLGVYGVT
Trigger: TGTCACTCCGTACACACCCAGTACCGCCGACATCCAGGTGTCCGACGACGACAAGGCAGGGGCCACTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS GCA 72 bp TTGAGGGTAGATGGTGTAGTACTGAGGGGGACTTGGTaGGGCAGCCGCTGCTCCGCTAGGAGGTATGAGACC +
Preference number: 6 (lower is better)
Translates to: LRVDGVVLRGTW*GSRCSARRYET
Trigger: GGTCTCATACCTCCTAGCGGAGCAGCGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp GTCTTGAGGGTAGATGGTGTAGTACTGAGGGGGACTTaGTGCGGCAGCCGCTGCTCCGCTAGGAGGTATGAG +
Preference number: 6 (lower is better)
Translates to: VLRVDGVVLRGT*CGSRCSARRYE
Trigger: CTCATACCTCCTAGCGGAGCAGCGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCTCAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 90 bp CGCTGCTCCGCTAGGAGGTATGAGACCGCAAGGATTCATCATGGGTaGCAGGTAGGTGGCGTTCATTCCCAGGGGCTCCTGAGAACCGTA +
Preference number: 6 (lower is better)
Translates to: RCSARRYETARIHHG*QVGGVHSQGLLRTV
Trigger: TACGGTTCTCAGGAGCCCCTGGGAATGAACGCCACCTACCTGCAACCCATGATGAATCCTTGCGGTCTCATACCTCCTAGCGGAGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp CACTCTCCACGAACGCAGCATTGTCTTGAGGGTAGATaGTGTAGTACTGAGGGGGACTTGGTGCGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: HSPRTQHCLEGR*CSTEGDLVRQP
Trigger: CGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCTCAAGACAATGCTGCGTTCGTGGAGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 90 bp ACCAGTCCTAGAAAGATGCCTGAGAAAAGCAAAGTGGCCCCTGCCTaGTCGTCGTCGGACACCTGGATGTCGGCGGTACTGGGTGTGTAC +
Preference number: 6 (lower is better)
Translates to: TSPRKMPEKSKVAPA*SSSDTWMSAVLGVY
Trigger: GTACACACCCAGTACCGCCGACATCCAGGTGTCCGACGACGACAAGGCAGGGGCCACTTTGCTTTTCTCAGGCATCTTTCTAGGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 90 bp CACGAAAGGAGAGAAGCCCTCACTCTCCACGAACGCAGCATTGTCTaGAGGGTAGATGGTGTAGTACTGAGGGGGACTTGGTGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: HERREALTLHERSIV*RVDGVVLRGTWCGS
Trigger: GCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCCTCAAGACAATGCTGCGTTCGTGGAGAGTGAGGGCTTCTCTCCTTTCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp ATGCCAGTGAAAACGAACGACTGTCCTCCGGAAGTCTaGTCCGAGTCCGGGACCCTCTCCTCGTTATCTGAG +
Preference number: 6 (lower is better)
Translates to: MPVKTNDCPPEV*SESGTLSSLSE
Trigger: CTCAGATAACGAGGAGAGGGTCCCGGACTCGGACCAGACTTCCGGAGGACAGTCGTTCGTTTTCACTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp ACGCAGTCCTCCTCTTCCAACTCCGTCCCTTCTAGCTaGTCAGCATCAGAGTCGGGCCTGTCATATCCAGTG +
Preference number: 6 (lower is better)
Translates to: TQSSSSNSVPSS*SASESGLSYPV
Trigger: CACTGGATATGACAGGCCCGACTCTGATGCTGACCAGCTAGAAGGGACGGAGTTGGAAGAGGAGGACTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 72 bp AGAAAGATGCCTGAGAAAAGCAAAGTGGCCCCTGCCTaGTCGTCGTCGGACACCTGGATGTCGGCGGTACTG +
Preference number: 6 (lower is better)
Translates to: RKMPEKSKVAPA*SSSDTWMSAVL
Trigger: CAGTACCGCCGACATCCAGGTGTCCGACGACGACAAGGCAGGGGCCACTTTGCTTTTCTCAGGCATCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp CCACCAGTCCTAGAAAGATGCCTGAGAAAAGCAAAGTaGCCCCTGCCTTGTCGTCGTCGGACACCTGGATGT +
Preference number: 6 (lower is better)
Translates to: PPVLERCLRKAK*PLPCRRRTPGC
Trigger: ACATCCAGGTGTCCGACGACGACAAGGCAGGGGCCACTTTGCTTTTCTCAGGCATCTTTCTAGGACTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp GTCACTCCGACCGACAGAAGGATGGGTCCGAGGAGCTaGGTCCATTCAAAGTGGGAGACACCTTGGTATTTG +
Preference number: 6 (lower is better)
Translates to: VTPTDRRMGPRS*VHSKWETPWYL
Trigger: CAAATACCAAGGTGTCTCCCACTTTGAATGGACCCAGCTCCTCGGACCCATCCTTCTGTCGGTCGGAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 72 bp AGAGAAGCCCTCACTCTCCACGAACGCAGCATTGTCTaGAGGGTAGATGGTGTAGTACTGAGGGGGACTTGG +
Preference number: 6 (lower is better)
Translates to: REALTLHERSIV*RVDGVVLRGTW
Trigger: CCAAGTCCCCCTCAGTACTACACCATCTACCCTCAAGACAATGCTGCGTTCGTGGAGAGTGAGGGCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CCA 72 bp AGAAGGATGGGTCCGAGGAGCTGGGTCCATTCAAAGTaGGAGACACCTTGGTATTTGATCCAGCCCATGACA +
Preference number: 6 (lower is better)
Translates to: RRMGPRSWVHSK*ETPWYLIQPMT
Trigger: TGTCATGGGCTGGATCAAATACCAAGGTGTCTCCCACTTTGAATGGACCCAGCTCCTCGGACCCATCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 90 bp GGGACCCTCTCCTCGTTATCTGAGCACAACTGGCAGGATAGCATTTaGAATTTGCACACAGCGATCAGGATGAATGTCACTCCGACCGAC +
Preference number: 6 (lower is better)
Translates to: GTLSSLSEHNWQDSI*NLHTAIRMNVTPTD
Trigger: GTCGGTCGGAGTGACATTCATCCTGATCGCTGTGTGCAAATTCAAAATGCTATCCTGCCAGTTGTGCTCAGATAACGAGGAGAGGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 72 bp AGCTGGGTCCATTCAAAGTGGGAGACACCTTGGTATTaGATCCAGCCCATGACAGTGAAAGTGATCCCCACC +
Preference number: 6 (lower is better)
Translates to: SWVHSKWETPWY*IQPMTVKVIPT
Trigger: GGTGGGGATCACTTTCACTGTCATGGGCTGGATCAAATACCAAGGTGTCTCCCACTTTGAATGGACCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 72 bp TCCGAGGAGCTGGGTCCATTCAAAGTGGGAGACACCTaGGTATTTGATCCAGCCCATGACAGTGAAAGTGAT +
Preference number: 6 (lower is better)
Translates to: SEELGPFKVGDT*VFDPAHDSESD
Trigger: ATCACTTTCACTGTCATGGGCTGGATCAAATACCAAGGTGTCTCCCACTTTGAATGGACCCAGCTCCTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 90 bp CTCTCCTCGTTATCTGAGCACAACTGGCAGGATAGCATTTTGAATTaGCACACAGCGATCAGGATGAATGTCACTCCGACCGACAGAAGG +
Preference number: 6 (lower is better)
Translates to: LSSLSEHNWQDSILN*HTAIRMNVTPTDRR
Trigger: CCTTCTGTCGGTCGGAGTGACATTCATCCTGATCGCTGTGTGCAAATTCAAAATGCTATCCTGCCAGTTGTGCTCAGATAACGAGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5
CDS CAA 72 bp TTATCTGAGCACAACTGGCAGGATAGCATTTTGAATTaGCACACAGCGATCAGGATGAATGTCACTCCGACC +
Preference number: 6 (lower is better)
Translates to: LSEHNWQDSILN*HTAIRMNVTPT
Trigger: GGTCGGAGTGACATTCATCCTGATCGCTGTGTGCAAATTCAAAATGCTATCCTGCCAGTTGTGCTCAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050389.5