Pregenerated sensors for TMEM170B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000087370Ensembl transcript IDs: ENSMUST00000129449.3, ENSMUST00000221694.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGGATGGAGGCACGTAAGGTGCAGTGCGGTAGTGCAAACGTTTaGACGCCAGAGGGCAGGCTTGCCACACGGCTCAAGGTCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PGMEARKVQCGSANV*TPEGRLATRLKVFP Trigger: AGGGAAGACCTTGAGCCGTGTGGCAAGCCTGCCCTCTGGCGTCCAAACGTTTGCACTACCGCACTGCACCTTACGTGCCTCCATCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR GCA 90 bp | CACAGAGAGTCTTGTGCACCTTGCCTGGGATGGAGGCACGTAAGGTaGAGTGCGGTAGTGCAAACGTTTGGACGCCAGAGGGCAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: HRESCAPCLGWRHVR*SAVVQTFGRQRAGL Trigger: CAAGCCTGCCCTCTGGCGTCCAAACGTTTGCACTACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | TTCCCCAAAGGGAAAGGCCGTGTCACGGAGCCTACACAGCAGGTGTaGGTGCAGGACATCGTGCAAAGGAGAGCAGGAGCATCACATGGA | + |
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Preference number: 1 (lower is better) Translates to: FPKGKGRVTEPTQQV*VQDIVQRRAGASHG Trigger: TCCATGTGATGCTCCTGCTCTCCTTTGCACGATGTCCTGCACCCACACCTGCTGTGTAGGCTCCGTGACACGGCCTTTCCCTTTGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR TCA 90 bp | TACCAGCCTAGGCATCTCAAAGAGGGCGCCCAGCCTTCCACGCTGTaGATGGAAGGTCCTGGAGGCACTGTTTTCTATAGCATCCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: YQPRHLKEGAQPSTL*MEGPGGTVFYSILR Trigger: TCTGAGGATGCTATAGAAAACAGTGCCTCCAGGACCTTCCATTCACAGCGTGGAAGGCTGGGCGCCCTCTTTGAGATGCCTAGGCTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR GCA 90 bp | ACAAGGTGCTTCTTCTTGCAGCTTCACAGAGAGTCTTGTGCACCTTaGCTGGGATGGAGGCACGTAAGGTGCAGTGCGGTAGTGCAAACG | + |
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Preference number: 1 (lower is better) Translates to: TRCFFLQLHRESCAP*LGWRHVRCSAVVQT Trigger: CGTTTGCACTACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAAGCACCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | TTCTTCTTGCAGCTTCACAGAGAGTCTTGTGCACCTTGCCTGGGATaGAGGCACGTAAGGTGCAGTGCGGTAGTGCAAACGTTTGGACGC | + |
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Preference number: 1 (lower is better) Translates to: FFLQLHRESCAPCLG*RHVRCSAVVQTFGR Trigger: GCGTCCAAACGTTTGCACTACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | AGCCTAGGCATCTCAAAGAGGGCGCCCAGCCTTCCACGCTGTGAATaGAAGGTCCTGGAGGCACTGTTTTCTATAGCATCCTCAGATCTT | + |
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Preference number: 1 (lower is better) Translates to: SLGISKRAPSLPRCE*KVLEALFSIASSDL Trigger: AAGATCTGAGGATGCTATAGAAAACAGTGCCTCCAGGACCTTCCATTCACAGCGTGGAAGGCTGGGCGCCCTCTTTGAGATGCCTAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR GCA 90 bp | AGGGCAGGCTTGCCACACGGCTCAAGGTCTTCCCTAGGTTTTTCTTaGTGGGTCCCTGCTTGTACCACTTCATTTCAGCTGATTAACCAC | + |
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Preference number: 1 (lower is better) Translates to: RAGLPHGSRSSLGFS*WVPACTTSFQLINH Trigger: GTGGTTAATCAGCTGAAATGAAGTGGTACAAGCAGGGACCCAGCAAGAAAAACCTAGGGAAGACCTTGAGCCGTGTGGCAAGCCTGCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR GCA 90 bp | CAACTAAACAAGGTGCTTCTTCTTGCAGCTTCACAGAGAGTCTTGTaGACCTTGCCTGGGATGGAGGCACGTAAGGTGCAGTGCGGTAGT | + |
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Preference number: 1 (lower is better) Translates to: QLNKVLLLAASQRVL*TLPGMEARKVQCGS Trigger: ACTACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAAGCACCTTGTTTAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | GCAGGCTTGCCACACGGCTCAAGGTCTTCCCTAGGTTTTTCTTGCTaGGTCCCTGCTTGTACCACTTCATTTCAGCTGATTAACCACACA | + |
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Preference number: 1 (lower is better) Translates to: AGLPHGSRSSLGFSC*VPACTTSFQLINHT Trigger: TGTGTGGTTAATCAGCTGAAATGAAGTGGTACAAGCAGGGACCCAGCAAGAAAAACCTAGGGAAGACCTTGAGCCGTGTGGCAAGCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | CAACAGTTCACCCTGTATATTACAAAGAGGAGAGCCATGTGCAGATaGATCTCAGAAGTTGTCCTGGGACCAGACGCGGATGGTGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: QQFTLYITKRRAMCR*ISEVVLGPDADGVS Trigger: ACTTACACCATCCGCGTCTGGTCCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATACAGGGTGAACTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR GCA 90 bp | TGTTTTCAACAGTTCACCCTGTATATTACAAAGAGGAGAGCCATGTaGAGATGGATCTCAGAAGTTGTCCTGGGACCAGACGCGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: CFQQFTLYITKRRAM*RWISEVVLGPDADG Trigger: ACCATCCGCGTCTGGTCCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATACAGGGTGAACTGTTGAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | GAAAACAGCAAGAATACAAAGAATGCATGGGAAGAGCAGCAGGCCTaGGCACAGCAGAAGAAATCAATTTCAGGCTTGTTCTCTGACATC | + |
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Preference number: 1 (lower is better) Translates to: ENSKNTKNAWEEQQA*AQQKKSISGLFSDI Trigger: GATGTCAGAGAACAAGCCTGAAATTGATTTCTTCTGCTGTGCCCAGGCCTGCTGCTCTTCCCATGCATTCTTTGTATTCTTGCTGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR TCA 90 bp | AACACAACACCGTTGAGAACGACGGTTTCAACACCAATGTTAACCTaGTTGGCAACTAAACAAGGTGCTTCTTCTTGCAGCTTCACAGAG | + |
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Preference number: 1 (lower is better) Translates to: NTTPLRTTVSTPMLT*LATKQGASSCSFTE Trigger: CTCTGTGAAGCTGCAAGAAGAAGCACCTTGTTTAGTTGCCAATCAGGTTAACATTGGTGTTGAAACCGTCGTTCTCAACGGTGTTGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR TCA 90 bp | GAGTCTCAGGAAGTAGTAAGGTACTACCCCAACCTTTTTAGACTTTaGAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGGAAATCCTAT | + |
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Preference number: 1 (lower is better) Translates to: ESQEVVRYYPNLFRL*NCLSSSWESLRKSY Trigger: ATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTTCAAAGTCTAAAAAGGTTGGGGTAGTACCTTACTACTTCCTGAGACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | CATGAGCAAACTTCTCTCTCCATGGTGGTTATGGTCTTAACAGGATaGAGGAACTATGCTTGCAAACACAGGGGGTTTTCATATGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: HEQTSLSMVVMVLTG*RNYACKHRGFSYAL Trigger: AAGAGCATATGAAAACCCCCTGTGTTTGCAAGCATAGTTCCTCCATCCTGTTAAGACCATAACCACCATGGAGAGAGAAGTTTGCTCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CCA 90 bp | TGCTCACGTTTAAGTTTAGAAAACAGCAAGAATACAAAGAATGCATaGGAAGAGCAGCAGGCCTGGGCACAGCAGAAGAAATCAATTTCA | + |
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Preference number: 1 (lower is better) Translates to: CSRLSLENSKNTKNA*EEQQAWAQQKKSIS Trigger: TGAAATTGATTTCTTCTGCTGTGCCCAGGCCTGCTGCTCTTCCCATGCATTCTTTGTATTCTTGCTGTTTTCTAAACTTAAACGTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR TCA 90 bp | ACCTTTTTAGACTTTGAAACTGCTTGTCCAGTTCCTGGGAGAGTCTaGGGAAATCCTATTTCAGCCATCTTTGTACACAGGAGATCTATA | + |
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Preference number: 1 (lower is better) Translates to: TFLDFETACPVPGRV*GNPISAIFVHRRSI Trigger: TATAGATCTCCTGTGTACAAAGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTTCAAAGTCTAAAAAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR TCA 90 bp | TATACTCACAGCACTCACCTATGTCTACACTTGCAAACTGTCACATaGTCAATGTTAACAGAAAGGAAAGTTTGGCACATAGATCAATTT | + |
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Preference number: 1 (lower is better) Translates to: YTHSTHLCLHLQTVT*SMLTERKVWHIDQF Trigger: AAATTGATCTATGTGCCAAACTTTCCTTTCTGTTAACATTGATCATGTGACAGTTTGCAAGTGTAGACATAGGTGAGTGCTGTGAGTATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR TCA 90 bp | GCATCTTTTCTTTACAGCTGTGAATTGAACTGCACTCTTATCTTCTaGGGCCAACTTTCAAGAACCAAAATAACTTGCATATGTTTATTG | + |
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Preference number: 1 (lower is better) Translates to: ASFLYSCELNCTLIF*GQLSRTKITCICLL Trigger: CAATAAACATATGCAAGTTATTTTGGTTCTTGAAAGTTGGCCTCAGAAGATAAGAGTGCAGTTCAATTCACAGCTGTAAAGAAAAGATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 90 bp | AGGTGCAGTGCGGTAGTGCAAACGTTTGGACGCCAGAGGGCAGGCTaGCCACACGGCTCAAGGTCTTCCCTAGGTTTTTCTTGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: RCSAVVQTFGRQRAG*PHGSRSSLGFSCWV Trigger: GACCCAGCAAGAAAAACCTAGGGAAGACCTTGAGCCGTGTGGCAAGCCTGCCCTCTGGCGTCCAAACGTTTGCACTACCGCACTGCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGAGAGGCAAATACCCCCGTGTGGTGAAGGACTGTAGAAGCAGTTGTGGCCACAGCAGGTGTGGGTaGAGGACATCGTGCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RRRGKYPRVVKDCRSSCGHSRCG*RTSCKG Trigger: TCCTTTGCACGATGTCCTGCACCCACACCTGCTGTG...GCCACAACTGCTTCTACAGTCCTTCACCACACGGGGGTATTTGCCTCTCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 90 bp | AACAAGGTGCTTCTTCTTGCAGCTTCACAGAGAGTCTTGTGCACCTaGCCTGGGATGGAGGCACGTAAGGTGCAGTGCGGTAGTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: NKVLLLAASQRVLCT*PGMEARKVQCGSAN Trigger: GTTTGCACTACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAAGCACCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 90 bp | TGGCAACTAAACAAGGTGCTTCTTCTTGCAGCTTCACAGAGAGTCTaGTGCACCTTGCCTGGGATGGAGGCACGTAAGGTGCAGTGCGGT | + |
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Preference number: 2 (lower is better) Translates to: WQLNKVLLLAASQRV*CTLPGMEARKVQCG Trigger: ACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAAGCACCTTGTTTAGTTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR CCA 90 bp | ATACTTGGGCTAGAACCACGGGTGAGCATTCTGCCAGATCATATGGCGACAATGGCACCTTGCCTGGGATaGAGGCACGTAAGGTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ILGLEPRVSILPDHMATMAPCLG*RHVRCS Trigger: ACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGC...CATTGTCGCCATATGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 90 bp | AAGTGCTGGGATCTCTCTGCAGGTGCTGTGCACAAAGCCAGCTCATaGGCCAAACCCCAGTCCTCCCTAAGTCCACTTTGCAAAAGATTC | + |
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Preference number: 2 (lower is better) Translates to: KCWDLSAGAVHKASS*AKPQSSLSPLCKRF Trigger: GAATCTTTTGCAAAGTGGACTTAGGGAGGACTGGGGTTTGGCCAATGAGCTGGCTTTGTGCACAGCACCTGCAGAGAGATCCCAGCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | ATACTTGGGCTAGAACCACGGGTGAGCATTCTGCCAGATCATATGGCGACAATGGGGGAAGAGCAAGAGTaGCCCAAGGAAAACACAGCT | + |
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Preference number: 2 (lower is better) Translates to: ILGLEPRVSILPDHMATMGEEQE*PKENTA Trigger: AGCTGTGTTTTCCTTGGGGCACTCTTGCTCTTCCCC...CATTGTCGCCATATGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR CCA 90 bp | GTATATTACAAAGAGGAGAGCCATGTGCAGATGGATCTCAGAAGTTGTCCTGGGCTTCCACGCTGTGAATaGAAGGTCCTGGAGGCACTG | + |
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Preference number: 2 (lower is better) Translates to: VYYKEESHVQMDLRSCPGLPRCE*KVLEAL Trigger: CAGTGCCTCCAGGACCTTCCATTCACAGCGTGGAAG...CCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | GATCTATCTCATTGGCTTAGAGTCTGGTCCTTGTCAGAGCAACACCTAAGACATTGGAGGCACGTAAGGTaGAGTGCGGTAGTGCAAACG | + |
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Preference number: 2 (lower is better) Translates to: DLSHWLRVWSLSEQHLRHWRHVR*SAVVQT Trigger: CGTTTGCACTACCGCACTGCACCTTACGTGCCTCCA...ATGTCTTAGGTGTTGCTCTGACAAGGACCAGACTCTAAGCCAATGAGATAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR TCA 90 bp | AACAGCAAGAATACAAAGAATGCATGGGAAGAGCAGCAGGCCTGGGCACAGCAGTTAATGAATGTGACCTaGGACTCTATTCGACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: NSKNTKNAWEEQQAWAQQLMNVT*DSIRLR Trigger: CCTGAGTCGAATAGAGTCTCAGGTCACATTCATTAA...CTGCTGTGCCCAGGCCTGCTGCTCTTCCCATGCATTCTTTGTATTCTTGCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | ATACTTGGGCTAGAACCACGGGTGAGCATTCTGCCAGATCATATGGCGACAATGCAAGAATACAAAGAATaGATGGGAAGAGCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ILGLEPRVSILPDHMATMQEYKE*MGRAAG Trigger: GCCTGCTGCTCTTCCCATGCATTCTTTGTATTCTTG...CATTGTCGCCATATGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | ATACTTGGGCTAGAACCACGGGTGAGCATTCTGCCAGATCATATGGCGACAATGTGGAGGAACTATGCTTaGAAACACAGGGGGTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: ILGLEPRVSILPDHMATMWRNYA*KHRGFS Trigger: TGAAAACCCCCTGTGTTTGCAAGCATAGTTCCTCCA...CATTGTCGCCATATGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGCAAGAGTGCCCCAAGGAAAACACAGCTACTATCATAAGCACTATGAAAGGGTGCAGGACATCGTaGAAAGGAGAGCAGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: EEQECPKENTATIISTMKGCRTS*KGEQEH Trigger: ATGCTCCTGCTCTCCTTTGCACGATGTCCTGCACCC...TTTCATAGTGCTTATGATAGTAGCTGTGTTTTCCTTGGGGCACTCTTGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR CCA 90 bp | ATACTTGGGCTAGAACCACGGGTGAGCATTCTGCCAGATCATATGGCGACAATGGCAGTACTTTGCATATaGGACCCAGTCAAAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: ILGLEPRVSILPDHMATMAVLCI*DPVKGC Trigger: ACATCCTTTGACTGGGTCCCATATGCAAAGTACTGC...CATTGTCGCCATATGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | GTATATTACAAAGAGGAGAGCCATGTGCAGATGGATCTCAGAAGTTGTCCTGGGCAAGGTGCTTCTTCTTaGAGCTTCACAGAGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VYYKEESHVQMDLRSCPGQGASS*SFTESL Trigger: AAGACTCTCTGTGAAGCTGCAAGAAGAAGCACCTTG...CCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGAGAGGCAAATACCCCCGTGTGGTGAAGGACTGTAGAAGCAGTTGTGGCAGAAGGGTTGAAGAATaGAACATGCATTTTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: RRRGKYPRVVKDCRSSCGRRVEE*NMHFRL Trigger: AAGTCTAAAATGCATGTTGCATTCTTCAACCCTTCT...GCCACAACTGCTTCTACAGTCCTTCACCACACGGGGGTATTTGCCTCTCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCTACACCAGCACGTCAGCTTCTGTCAAGAAATGCACACATCTAAGTTAGGATTAACACAACACCGTTaGGAACGACGGTTTCAACAC | + |
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Preference number: 2 (lower is better) Translates to: SLHQHVSFCQEMHTSKLGLTQHR*ERRFQH Trigger: GTGTTGAAACCGTCGTTCTCAACGGTGTTGTGTTAA...TCCTAACTTAGATGTGTGCATTTCTTGACAGAAGCTGACGTGCTGGTGTAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | TCTCTACACCAGCACGTCAGCTTCTGTCAAGAAATGCACACATCTAAGTTAGGATTCTTGCTGGGTCCCTaGTTGTACCACTTCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: SLHQHVSFCQEMHTSKLGFLLGP*LYHFIS Trigger: TGAAATGAAGTGGTACAAGCAGGGACCCAGCAAGAA...TCCTAACTTAGATGTGTGCATTTCTTGACAGAAGCTGACGTGCTGGTGTAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR CCA 90 bp | AACAGCAAGAATACAAAGAATGCATGGGAAGAGCAGCAGGCCTGGGCACAGCAGACAGAAAGGAAAGTTTaGCACATAGATCAATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NSKNTKNAWEEQQAWAQQTERKV*HIDQFL Trigger: GAGAAATTGATCTATGTGCCAAACTTTCCTTTCTGT...CTGCTGTGCCCAGGCCTGCTGCTCTTCCCATGCATTCTTTGTATTCTTGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGGAAATCCTATTTCAGCCATCTTTAGTAAGTCTAAGTTaGCTGATGCACTGGCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: KLLVQFLGESEEILFQPSLVSLS*LMHWQS Trigger: GCTTTGCCAGTGCATCAGCCAACTTAGACTTACTAA...AGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGGAAATCCTATTTCAGCCATCTCTTGGTCACATGAGATaGGGTGCTAAGGAAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: KLLVQFLGESEEILFQPSLGHMR*GAKEEN Trigger: ATTTTCTTCCTTAGCACCCCATCTCATGTGACCAAG...AGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR TCA 90 bp | AAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGGAAATCCTATTTCAGCCATCTACACCAATGTTAACCTaGTTGGCAACTAAACAAGGT | + |
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Preference number: 2 (lower is better) Translates to: KLLVQFLGESEEILFQPSTPMLT*LATKQG Trigger: ACCTTGTTTAGTTGCCAATCAGGTTAACATTGGTGT...AGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGCAAGAGTGCCCCAAGGAAAACACAGCTACTATCATAAGCACTATGAAAAAGACACGTACACAGTaGACACAATCCCACTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: EEQECPKENTATIISTMKKTRTQ*TQSHCN Trigger: ATTGCAGTGGGATTGTGTGCACTGTGTACGTGTCTT...TTTCATAGTGCTTATGATAGTAGCTGTGTTTTCCTTGGGGCACTCTTGCTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR TCA 90 bp | GTATATTACAAAGAGGAGAGCCATGTGCAGATGGATCTCAGAAGTTGTCCTGGGTTTACAGCTGTGAATTaGACTGCACTCTTATCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VYYKEESHVQMDLRSCPGFTAVN*TALLSS Trigger: AGAAGATAAGAGTGCAGTTCAATTCACAGCTGTAAA...CCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCTACACCAGCACGTCAGCTTCTGTCAAGAAATGCACACATCTAAGTTAGGAATGTCCTTTATATCCTaGACAGTTTCAAAGGATGAG | + |
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Preference number: 2 (lower is better) Translates to: SLHQHVSFCQEMHTSKLGMSFIS*TVSKDE Trigger: CTCATCCTTTGAAACTGTTCAGGATATAAAGGACAT...TCCTAACTTAGATGTGTGCATTTCTTGACAGAAGCTGACGTGCTGGTGTAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR-3UTR GCA 90 bp | GTATATTACAAAGAGGAGAGCCATGTGCAGATGGATCTCAGAAGTTGTCCTGGGTCCCTAAGTCCACTTTaGAAAAGATTCTTAACTTTC | + |
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Preference number: 2 (lower is better) Translates to: VYYKEESHVQMDLRSCPGSLSPL*KRFLTF Trigger: GAAAGTTAAGAATCTTTTGCAAAGTGGACTTAGGGA...CCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 90 bp | CATATGCTCTTGTTTTGTGTATTAGCCTCTCTAACATCCCCCACTTaGAATTTCTCTCTGTTACAAATGGCATTGCACATTCAAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: HMLLFCVLASLTSPT*NFSLLQMALHIQET Trigger: TGTTTCTTGAATGTGCAATGCCATTTGTAACAGAGAGAAATTCAAAGTGGGGGATGTTAGAGAGGCTAATACACAAAACAAGAGCATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CAA 90 bp | TGCTTTGGAAAGGAGATTGTTAGAGAAACTGCTAAATATATTAGTTaGCAAAACCCAAAAGGCCATTATGTGTGTTCAATACATGTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: CFGKEIVRETAKYIS*QNPKGHYVCSIHVP Trigger: GGGCACATGTATTGAACACACATAATGGCCTTTTGGGTTTTGCAAACTAATATATTTAGCAGTTTCTCTAACAATCTCCTTTCCAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | GAGGCACGTAAGGTGCAGTGCGGTAGTGCAAACGTTTaGACGCCAGAGGGCAGGCTTGCCACACGGCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EARKVQCGSANV*TPEGRLATRLK Trigger: CTTGAGCCGTGTGGCAAGCCTGCCCTCTGGCGTCCAAACGTTTGCACTACCGCACTGCACCTTACGTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | GGGAAAGGCCGTGTCACGGAGCCTACACAGCAGGTGTaGGTGCAGGACATCGTGCAAAGGAGAGCAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GKGRVTEPTQQV*VQDIVQRRAGA Trigger: TGCTCCTGCTCTCCTTTGCACGATGTCCTGCACCCACACCTGCTGTGTAGGCTCCGTGACACGGCCTTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | TCTTGTGCACCTTGCCTGGGATGGAGGCACGTAAGGTaGAGTGCGGTAGTGCAAACGTTTGGACGCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCAPCLGWRHVR*SAVVQTFGRQR Trigger: CCTCTGGCGTCCAAACGTTTGCACTACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGTGCAGTGCGGTAGTGCAAACGTTTGGACGCCAGAGGGCAGGCTTGCCACACTTCCCTAGGTTTTTCTaGCTGGGTCCCTGCTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RCSAVVQTFGRQRAGLPHFPRFF*LGPCLY Trigger: GTACAAGCAGGGACCCAGCAAGAAAAACCTAGGGAA...GTGTGGCAAGCCTGCCCTCTGGCGTCCAAACGTTTGCACTACCGCACTGCACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | CCCACTGTAAGTGCTGGGATCTCTCTGCAGGTGCTGTaGACAAAGCCAGCTCATTGGCCAAACCCCAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PTVSAGISLQVL*TKPAHWPNPSP Trigger: AGGACTGGGGTTTGGCCAATGAGCTGGCTTTGTGCACAGCACCTGCAGAGAGATCCCAGCACTTACAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | CAGCTTCACAGAGAGTCTTGTGCACCTTGCCTGGGATaGAGGCACGTAAGGTGCAGTGCGGTAGTGCAAACG | + |
|
Preference number: 3 (lower is better) Translates to: QLHRESCAPCLG*RHVRCSAVVQT Trigger: CGTTTGCACTACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | GTAGCTGGACTTGTCTCAGTGGCCCACTGTAAGTGCTaGGATCTCTCTGCAGGTGCTGTGCACAAAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAGLVSVAHCKC*DLSAGAVHKAS Trigger: GCTGGCTTTGTGCACAGCACCTGCAGAGAGATCCCAGCACTTACAGTGGGCCACTGAGACAAGTCCAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAGAGGCAAATACCCCCGTGTGGTGAAGGACTGTAGAAGCAGTTGTGGCCACAAAGCCAGCTCATaGGCCAAACCCCAGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RRRGKYPRVVKDCRSSCGHKASS*AKPQSS Trigger: GGAGGACTGGGGTTTGGCCAATGAGCTGGCTTTGTG...GCCACAACTGCTTCTACAGTCCTTCACCACACGGGGGTATTTGCCTCTCCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | AGGAGGGAAGTGCTCCGCTCATGGGGTGAGTCCAGATaGTCAGCATCAGAGTATGGAGCTAGGCATTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RREVLRSWGESR*SASEYGARHSP Trigger: TGGGGAATGCCTAGCTCCATACTCTGATGCTGATCATCTGGACTCACCCCATGAGCGGAGCACTTCCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | TTCTTCTTGCAGCTTCACAGAGAGTCTTGTGCACCTTaGCTGGGATGGAGGCACGTAAGGTGCAGTGCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FFLQLHRESCAP*LGWRHVRCSAV Trigger: TACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | ATCTCAAAGAGGGCGCCCAGCCTTCCACGCTGTGAATaGAAGGTCCTGGAGGCACTGTTTTCTATAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: ISKRAPSLPRCE*KVLEALFSIAS Trigger: GGATGCTATAGAAAACAGTGCCTCCAGGACCTTCCATTCACAGCGTGGAAGGCTGGGCGCCCTCTTTGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | CTCATCCTGGGACATCTTAAGGCAGGGGCTAATACTTaGGCTAGAACCACGGGTGAGCATTCTGCCAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: LILGHLKAGANT*ARTTGEHSARS Trigger: TGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTATTAGCCCCTGCCTTAAGATGTCCCAGGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCAAGAGTGCCCCAAGGAAAACACAGCTACTATCATAAGCACTATGAAACGCCAGAGGGCAGGCTaGCCACACGGCTCAAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EEQECPKENTATIISTMKRQRAG*PHGSRS Trigger: AGACCTTGAGCCGTGTGGCAAGCCTGCCCTCTGGCG...TTTCATAGTGCTTATGATAGTAGCTGTGTTTTCCTTGGGGCACTCTTGCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | AAAGGGAAAGAAGGAGAGGCAAATACCCCCGTGTGGTaGAGGACTGTAGAAGCAGTTGTGGCCTGTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: KGKEGEANTPVW*RTVEAVVACHS Trigger: ACTGTGACAGGCCACAACTGCTTCTACAGTCCTTCACCACACGGGGGTATTTGCCTCTCCTTCTTTCCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | CTAAATGAAGAAAGGGTACTGCATCCCAGCTCAGCTTaGTCAGAAAGGTGTAGCAGTGCAGCACCTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LNEERVLHPSSA*SERCSSAAPAS Trigger: GGAAGCAGGTGCTGCACTGCTACACCTTTCTGAGCAAGCTGAGCTGGGATGCAGTACCCTTTCTTCATTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTATCTCATTGGCTTAGAGTCTGGTCCTTGTCAGAGCAACACCTAAGACATAGAGTCTTGTGCACCTaGCCTGGGATGGAGGCACGT | + |
|
Preference number: 3 (lower is better) Translates to: DLSHWLRVWSLSEQHLRHRVLCT*PGMEAR Trigger: ACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCT...ATGTCTTAGGTGTTGCTCTGACAAGGACCAGACTCTAAGCCAATGAGATAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | CCACACGGCTCAAGGTCTTCCCTAGGTTTTTCTTGCTaGGTCCCTGCTTGTACCACTTCATTTCAGCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: PHGSRSSLGFSC*VPACTTSFQLI Trigger: AATCAGCTGAAATGAAGTGGTACAAGCAGGGACCCAGCAAGAAAAACCTAGGGAAGACCTTGAGCCGTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | ACCCTGTATATTACAAAGAGGAGAGCCATGTGCAGATaGATCTCAGAAGTTGTCCTGGGACCAGACGCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TLYITKRRAMCR*ISEVVLGPDAD Trigger: ATCCGCGTCTGGTCCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATACAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | TTAAGTCTCACGCTGGCACACAAAGCTCTGAGTTGCTaGCAAGAGCAAAGCCAGCCAAACAGGAGAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLTLAHKALSC*QEQSQPNRREN Trigger: GTTTTCTCTCCTGTTTGGCTGGCTTTGCTCTTGTCAGCAACTCAGAGCTTTGTGTGCCAGCGTGAGACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | CAGTTCACCCTGTATATTACAAAGAGGAGAGCCATGTaGAGATGGATCTCAGAAGTTGTCCTGGGACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QFTLYITKRRAM*RWISEVVLGPD Trigger: GTCTGGTCCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATACAGGGTGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAGAGGCAAATACCCCCGTGTGGTGAAGGACTGTAGAAGCAGTTGTGGCCAAGTGACAATGTGTTaGACTCATAAAGGTTTGATC | + |
|
Preference number: 3 (lower is better) Translates to: RRRGKYPRVVKDCRSSCGQVTMC*THKGLI Trigger: GATCAAACCTTTATGAGTCAAACACATTGTCACTTG...GCCACAACTGCTTCTACAGTCCTTCACCACACGGGGGTATTTGCCTCTCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGGAAATCCTATTTCAGCCATCTACACCATCCTTGGTATaGAAAGCCCACTATCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: KLLVQFLGESEEILFQPSTPSLV*KAHYPT Trigger: TGTTGGATAGTGGGCTTTCAATACCAAGGATGGTGT...AGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | CCGTTGAGAACGACGGTTTCAACACCAATGTTAACCTaGTTGGCAACTAAACAAGGTGCTTCTTCTTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLRTTVSTPMLT*LATKQGASSCS Trigger: GCTGCAAGAAGAAGCACCTTGTTTAGTTGCCAATCAGGTTAACATTGGTGTTGAAACCGTCGTTCTCAACGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | GACTTTGAAACTGCTTGTCCAGTTCCTGGGAGAGTCTaGGGAAATCCTATTTCAGCCATCTTTGTACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: DFETACPVPGRV*GNPISAIFVHR Trigger: CCTGTGTACAAAGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTTCAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | GAAGTAGTAAGGTACTACCCCAACCTTTTTAGACTTTaGAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: EVVRYYPNLFRL*NCLSSSWESLR Trigger: CCTCAGACTCTCCCAGGAACTGGACAAGCAGTTTCAAAGTCTAAAAAGGTTGGGGTAGTACCTTACTACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | AAGAATACAAAGAATGCATGGGAAGAGCAGCAGGCCTaGGCACAGCAGAAGAAATCAATTTCAGGCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: KNTKNAWEEQQA*AQQKKSISGLF Trigger: GAACAAGCCTGAAATTGATTTCTTCTGCTGTGCCCAGGCCTGCTGCTCTTCCCATGCATTCTTTGTATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | ACTTCTCTCTCCATGGTGGTTATGGTCTTAACAGGATaGAGGAACTATGCTTGCAAACACAGGGGGTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSLSMVVMVLTG*RNYACKHRGFS Trigger: TGAAAACCCCCTGTGTTTGCAAGCATAGTTCCTCCATCCTGTTAAGACCATAACCACCATGGAGAGAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | AAACCTTTTGACTTAAAAAGGAGGAGCCATGCACAGTaGTACACATCTGCAATCCTGGTACCTGACAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KPFDLKRRSHAQ*YTSAILVPDKL Trigger: CAGCTTGTCAGGTACCAGGATTGCAGATGTGTACCACTGTGCATGGCTCCTCCTTTTTAAGTCAAAAGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTGGGCTAGAACCACGGGTGAGCATTCTGCCAGATCATATGGCGACAATGTCATATGCTCTTGTTTaGTGTATTAGCCTCTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: ILGLEPRVSILPDHMATMSYALV*CISLSN Trigger: GTTAGAGAGGCTAATACACAAAACAAGAGCATATGA...CATTGTCGCCATATGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | CATGGTGGTTATGGTCTTAACAGGATGGAGGAACTATaGTTGCAAACACAGGGGGTTTTCATATGCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HGGYGLNRMEEL*LQTQGVFICSC Trigger: ACAAGAGCATATGAAAACCCCCTGTGTTTGCAAGCATAGTTCCTCCATCCTGTTAAGACCATAACCACCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | TTAAATTTCCAAGCCACGTTATTAGTAAGTCTAAGTTaGCTGATGCACTGGCAAAGCAGCTCCTCCCGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LNFQATLLVSLS*LMHWQSSSSRN Trigger: GTTTCGGGAGGAGCTGCTTTGCCAGTGCATCAGCCAACTTAGACTTACTAATAACGTGGCTTGGAAATTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | CCATGTTATCATATAACTAAAGCTGCTCTCTCATCCTaGGACATCTTAAGGCAGGGGCTAATACTTGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PCYHITKAALSS*DILRQGLILGL Trigger: TAGCCCAAGTATTAGCCCCTGCCTTAAGATGTCCCAGGATGAGAGAGCAGCTTTAGTTATATGATAACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR-3UTR CAA 90 bp | GTATATTACAAAGAGGAGAGCCATGTGCAGATGGATCTCAGAAGTTGTCCTGGGCTAACATCCCCCACTTaGAATTTCTCTCTGTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: VYYKEESHVQMDLRSCPGLTSPT*NFSLLQ Trigger: TTGTAACAGAGAGAAATTCAAAGTGGGGGATGTTAG...CCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | CAAGACACGTACACAGTGCACACAATCCCACTGCAATaGATTAGAATATTCTGTGAGATGGAGGCAAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: QDTYTVHTIPLQ*IRIFCEMEAKT Trigger: GGTTTTTGCCTCCATCTCACAGAATATTCTAATTCATTGCAGTGGGATTGTGTGCACTGTGTACGTGTCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | GCTGGCCACATCCATTCTCTCTACATTAACCAGAGGTaGGCAGAACCTGTAATATATTCCTATTTACCCATC | + |
|
Preference number: 3 (lower is better) Translates to: AGHIHSLYINQR*AEPVIYSYLPI Trigger: GATGGGTAAATAGGAATATATTACAGGTTCTGCTCACCTCTGGTTAATGTAGAGAGAATGGATGTGGCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | ATTCTGTGTAATGACACTGAAGTGCTGGATTCACTGTaGCAGATGTCCTGTGTGTTTTCAACAGTTCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ILCNDTEVLDSL*QMSCVFSTVHP Trigger: AGGGTGAACTGTTGAAAACACACAGGACATCTGTCACAGTGAATCCAGCACTTCAGTGTCATTACACAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | ACACTCAAGACACGTACACAGTGCACACAATCCCACTaGAATGAATTAGAATATTCTGTGAGATGGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLKTRTQCTQSH*NELEYSVRWRQ Trigger: TTGCCTCCATCTCACAGAATATTCTAATTCATTGCAGTGGGATTGTGTGCACTGTGTACGTGTCTTGAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR TCA 72 bp | GGATGGTGTAAGTTGTGCATCTTTTCTTTACAGCTGTaGATTGAACTGCACTCTTATCTTCTGAGGCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: GWCKLCIFSLQL*IELHSYLLRPT Trigger: AGTTGGCCTCAGAAGATAAGAGTGCAGTTCAATTCACAGCTGTAAAGAAAAGATGCACAACTTACACCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | TTCTCCCTGCCACATACACAGAGGGAGACAGTTTACTaGTCTTCCTATGTAAGGTACTTATTATTTTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FSLPHTQRETVY*SSYVRYLLFSY Trigger: ATAGGAAAATAATAAGTACCTTACATAGGAAGAGCAGTAAACTGTCTCCCTCTGTGTATGTGGCAGGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR GCA 72 bp | ACTATAGAATCCAAGACACTCAAGACACGTACACAGTaGACACAATCCCACTGCAATGAATTAGAATATTCT | + |
|
Preference number: 3 (lower is better) Translates to: TIESKTLKTRTQ*TQSHCNELEYS Trigger: AGAATATTCTAATTCATTGCAGTGGGATTGTGTGCACTGTGTACGTGTCTTGAGTGTCTTGGATTCTATAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CCA 72 bp | TTTCACCCTAGAGCACAAAACAAGCGCAATTCTCTTTaGTCCATTCATTCACATAGTCAATGTATCAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: FHPRAQNKRNSL*SIHSHSQCIKV Trigger: TACCTTGATACATTGACTATGTGAATGAATGGACCAAAGAGAATTGCGCTTGTTTTGTGCTCTAGGGTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAACCCACTGCTGCACCCGTaGGGTTCCTCAGCACCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRGLCPHVSLVKKTFPQNPLLHP*GSSAPC Trigger: GCACGGTGCTGAGGAACCTCACGGGTGCAGCAGTGG...GTTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221694.2 |
||
| 3UTR CAA 72 bp | GCGGTAGTGCAAACGTTTGGACGCCAGAGGGCAGGCTaGCCACACGGCTCAAGGTCTTCCCTAGGTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVVQTFGRQRAG*PHGSRSSLGFS Trigger: AGAAAAACCTAGGGAAGACCTTGAGCCGTGTGGCAAGCCTGCCCTCTGGCGTCCAAACGTTTGCACTACCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| CDS-3UTR TCA 90 bp | TTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAACGCTGCACCGACAGGTTaGTCATCGAGTGGTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FRGLCPHVSLVKKTFPQNAAPTG*SSSGRR Trigger: GCGCCGACCACTCGATGATCAACCTGTCGGTGCAGC...GTTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAACGGTTCCTCAGCACCGTaGCATGGGCCCAGAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRGLCPHVSLVKKTFPQNGSSAP*HGPRGS Trigger: TGAGCCTCTGGGCCCATGGCACGGTGCTGAGGAACC...GTTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAACTCAGCACCGTGCCATaGGCCCAGAGGCTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FPGTLSTRFLSEEDIPSELSTVP*AQRLRT Trigger: GGTCCTGAGCCTCTGGGCCCATGGCACGGTGCTGAG...TTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
||
| 3UTR CAA 72 bp | CTTCTTCTTGCAGCTTCACAGAGAGTCTTGTGCACCTaGCCTGGGATGGAGGCACGTAAGGTGCAGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLAASQRVLCT*PGMEARKVQCG Trigger: ACCGCACTGCACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
||
| 3UTR CAA 72 bp | GATCTCTCTGCAGGTGCTGTGCACAAAGCCAGCTCATaGGCCAAACCCCAGTCCTCCCTAAGTCCACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DLSAGAVHKASS*AKPQSSLSPLC Trigger: GCAAAGTGGACTTAGGGAGGACTGGGGTTTGGCCAATGAGCTGGCTTTGTGCACAGCACCTGCAGAGAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR GCA 90 bp | TTTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAACAGCCACTCTGTAGATaGCGGCCACTGCTGCACCCG | + |
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Preference number: 4 (lower is better) Translates to: FPGTLSTRFLSEEDIPSEQPLCR*RPLLHP Trigger: CGGGTGCAGCAGTGGCCGGCATCTACAGAGTGGCTG...TTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221694.2 |
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| CDS-3UTR CCA 90 bp | TTTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAAAGGTTGATCATCGAGTaGTCGGCGCCCTCCGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FPGTLSTRFLSEEDIPSERLIIE*SAPSAL Trigger: GAGGGCGGAGGGCGCCGACCACTCGATGATCAACCT...TTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
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| CDS-3UTR CCA 90 bp | AAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGGAAATCCTATTTCAGCCATCTCTCAGCACCGTGCCATaGGCCCAGAGGCTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KLLVQFLGESEEILFQPSLSTVP*AQRLRT Trigger: GGTCCTGAGCCTCTGGGCCCATGGCACGGTGCTGAG...AGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR GCA 90 bp | AACAGCAAGAATACAAAGAATGCATGGGAAGAGCAGCAGGCCTGGGCACAGCAGAGGCTCAGGACCTGCTaGACCGACAGGTTGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: NSKNTKNAWEEQQAWAQQRLRTC*TDRLII Trigger: GATGATCAACCTGTCGGTGCAGCAGGTCCTGAGCCT...CTGCTGTGCCCAGGCCTGCTGCTCTTCCCATGCATTCTTTGTATTCTTGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR GCA 90 bp | TTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAACCAGAGGCTCAGGACCTaGTGCACCGACAGGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FRGLCPHVSLVKKTFPQNQRLRT*CTDRLI Trigger: GATCAACCTGTCGGTGCAGCAGGTCCTGAGCCTCTG...GTTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
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| CDS-3UTR CCA 90 bp | AAACTGCTTGTCCAGTTCCTGGGAGAGTCTGAGGAAATCCTATTTCAGCCATCTAGGTTGATCATCGAGTaGTCGGCGCCCTCCGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLLVQFLGESEEILFQPSRLIIE*SAPSAL Trigger: GAGGGCGGAGGGCGCCGACCACTCGATGATCAACCT...AGATGGCTGAAATAGGATTTCCTCAGACTCTCCCAGGAACTGGACAAGCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | AACAAGGTGCTTCTTCTTGCAGCTTCACAGAGAGTCTaGTGCACCTTGCCTGGGATGGAGGCACGTAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKVLLLAASQRV*CTLPGMEARKV Trigger: CACCTTACGTGCCTCCATCCCAGGCAAGGTGCACAAGACTCTCTGTGAAGCTGCAAGAAGAAGCACCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR TCA 90 bp | GATCTATCTCATTGGCTTAGAGTCTGGTCCTTGTCAGAGCAACACCTAAGACATGCTGCACCGACAGGTTaGTCATCGAGTGGTCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: DLSHWLRVWSLSEQHLRHAAPTG*SSSGRR Trigger: GCGCCGACCACTCGATGATCAACCTGTCGGTGCAGC...ATGTCTTAGGTGTTGCTCTGACAAGGACCAGACTCTAAGCCAATGAGATAGATC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR GCA 90 bp | TTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAACAGGCTCAGGACCTGCTaGACCGACAGGTTGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: FRGLCPHVSLVKKTFPQNRLRTC*TDRLII Trigger: GATGATCAACCTGTCGGTGCAGCAGGTCCTGAGCCT...GTTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
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| CDS-3UTR CCA 90 bp | GTATATTACAAAGAGGAGAGCCATGTGCAGATGGATCTCAGAAGTTGTCCTGGGACGCCTGCAGCACCGTaGACAAACAGAGAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYYKEESHVQMDLRSCPGTPAAP*TNREEK Trigger: CTTCTCCTCTCTGTTTGTCCACGGTGCTGCAGGCGT...CCCAGGACAACTTCTGAGATCCATCTGCACATGGCTCTCCTCTTTGTAATATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | ACAGTTAAGTCTCACGCTGGCACACAAAGCTCTGAGTaGCTGACAAGAGCAAAGCCAGCCAAACAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVKSHAGTQSSE*LTRAKPAKQER Trigger: TCTCTCCTGTTTGGCTGGCTTTGCTCTTGTCAGCAACTCAGAGCTTTGTGTGCCAGCGTGAGACTTAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR TCA 90 bp | ATACTTGGGCTAGAACCACGGGTGAGCATTCTGCCAGATCATATGGCGACAATGTGTGGCGAGGATCCTTaGAAAGGAGATGATGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILGLEPRVSILPDHMATMCGEDP*KGDDEC Trigger: ACACTCATCATCTCCTTTTCAAGGATCCTCGCCACA...CATTGTCGCCATATGATCTGGCAGAATGCTCACCCGTGGTTCTAGCCCAAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGCAAGAGTGCCCCAAGGAAAACACAGCTACTATCATAAGCACTATGAAACAGAGGCTCAGGACCTaGTGCACCGACAGGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: EEQECPKENTATIISTMKQRLRT*CTDRLI Trigger: GATCAACCTGTCGGTGCAGCAGGTCCTGAGCCTCTG...TTTCATAGTGCTTATGATAGTAGCTGTGTTTTCCTTGGGGCACTCTTGCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR GCA 90 bp | GATCTATCTCATTGGCTTAGAGTCTGGTCCTTGTCAGAGCAACACCTAAGACATACTCTCCCCTGCCTGTaGCTCTGCAGCATCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLSHWLRVWSLSEQHLRHTLPCL*LCSITN Trigger: GTTTGTGATGCTGCAGAGGCACAGGCAGGGGAGAGT...ATGTCTTAGGTGTTGCTCTGACAAGGACCAGACTCTAAGCCAATGAGATAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR TCA 90 bp | TTTCCGGGGACTCTGTCCACACGTTTCCTTAGTGAAGAAGACATTCCCTCAGAATGTGGCGAGGATCCTTaGAAAGGAGATGATGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPGTLSTRFLSEEDIPSECGEDP*KGDDEC Trigger: ACACTCATCATCTCCTTTTCAAGGATCCTCGCCACA...TTCTGAGGGAATGTCTTCTTCACTAAGGAAACGTGTGGACAGAGTCCCCGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
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| CDS-3UTR GCA 90 bp | GATCTATCTCATTGGCTTAGAGTCTGGTCCTTGTCAGAGCAACACCTAAGACATAAACATCAGCACGCCTaGAGCACCGTGGACAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: DLSHWLRVWSLSEQHLRHKHQHA*STVDKQ Trigger: CTGTTTGTCCACGGTGCTGCAGGCGTGCTGATGTTT...ATGTCTTAGGTGTTGCTCTGACAAGGACCAGACTCTAAGCCAATGAGATAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS-3UTR GCA 90 bp | GAAGAGCAAGAGTGCCCCAAGGAAAACACAGCTACTATCATAAGCACTATGAAACCCTGCCTGTGCCTCTaGAGCATCACAAACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEQECPKENTATIISTMKPCLCL*SITNIS Trigger: GCTGATGTTTGTGATGCTGCAGAGGCACAGGCAGGG...TTTCATAGTGCTTATGATAGTAGCTGTGTTTTCCTTGGGGCACTCTTGCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | TGTTCACATAACGCGGGTACCTCACCAAACACACTTTaGTCTGAGTATCACCCTCCAACGTCTAGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSHNAGTSPNTL*SEYHPPTSSLP Trigger: AGGAAGACTAGACGTTGGAGGGTGATACTCAGACAAAAGTGTGTTTGGTGAGGTACCCGCGTTATGTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | CTGCATTGTCTTGATACACTCAGACTAACTGCCAACTaGAAAACCATCCACTCAGTCCTCAGTCTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHCLDTLRLTAN*KTIHSVLSLPK Trigger: CTTGGGAAGACTGAGGACTGAGTGGATGGTTTTCAAGTTGGCAGTTAGTCTGAGTGTATCAAGACAATGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | CTCATTGGCCAAACCCCAGTCCTCCCTAAGTCCACTTaGCAAAAGATTCTTAACTTTCAAGGCCCTGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LIGQTPVLPKST*QKILNFQGPEI Trigger: TATCTCAGGGCCTTGAAAGTTAAGAATCTTTTGCAAAGTGGACTTAGGGAGGACTGGGGTTTGGCCAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | CAGGCCTGGGCACAGCAGAAGAAATCAATTTCAGGCTaGTTCTCTGACATCTCTAAGGATATAGCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAWAQQKKSISG*FSDISKDIALL Trigger: AAGCAAAGCTATATCCTTAGAGATGTCAGAGAACAAGCCTGAAATTGATTTCTTCTGCTGTGCCCAGGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | ACACTCAGCTTAACAAACCGAACACCATCCTTGGTATaGAAAGCCCACTATCCAACACTCATGGGATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLSLTNRTPSLV*KAHYPTLMGLT Trigger: TGTTAATCCCATGAGTGTTGGATAGTGGGCTTTCAATACCAAGGATGGTGTTCGGTTTGTTAAGCTGAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| 3UTR CAA 72 bp | TTGTTTTGTGTATTAGCCTCTCTAACATCCCCCACTTaGAATTTCTCTCTGTTACAAATGGCATTGCACATT | + |
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Preference number: 4 (lower is better) Translates to: LFCVLASLTSPT*NFSLLQMALHI Trigger: AATGTGCAATGCCATTTGTAACAGAGAGAAATTCAAAGTGGGGGATGTTAGAGAGGCTAATACACAAAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS CCA 90 bp | ATGCCGGCCACTGCTGCACCCGTGAGGTTCCTCAGCACCGTGCCATaGGCCCAGAGGCTCAGGACCTGCTGCACCGACAGGTTGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: MPATAAPVRFLSTVP*AQRLRTCCTDRLII Trigger: GATGATCAACCTGTCGGTGCAGCAGGTCCTGAGCCTCTGGGCCCATGGCACGGTGCTGAGGAACCTCACGGGTGCAGCAGTGGCCGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221694.2 |
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| CDS CCA 90 bp | AAGATCCAGTACCACATCTCCGTGAGGTTCCTCAGCACCGTGCCATaGGCCCAGAGGCTCAGGACCTGCTGCACCGACAGGTTGATCATC | + |
|
Preference number: 5 (lower is better) Translates to: KIQYHISVRFLSTVP*AQRLRTCCTDRLII Trigger: GATGATCAACCTGTCGGTGCAGCAGGTCCTGAGCCTCTGGGCCCATGGCACGGTGCTGAGGAACCTCACGGAGATGTGGTACTGGATCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS GCA 90 bp | TCTCCCCTGCCTGTGCCTCTGCAGCATCACAAACATCAGCACGCCTaGAGCACCGTGGACAAACAGAGAGGAGAAGAGAGCCCAGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPLPVPLQHHKHQHA*STVDKQRGEESPEE Trigger: TTCCTCTGGGCTCTCTTCTCCTCTCTGTTTGTCCACGGTGCTGCAGGCGTGCTGATGTTTGTGATGCTGCAGAGGCACAGGCAGGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS GCA 90 bp | ATGCTGACAGCAATGATGGAGATCACTCTCCCCTGCCTGTGCCTCTaGAGCATCACAAACATCAGCACGCCTGCAGCACCGTGGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MLTAMMEITLPCLCL*SITNISTPAAPWTN Trigger: GTTTGTCCACGGTGCTGCAGGCGTGCTGATGTTTGTGATGCTGCAGAGGCACAGGCAGGGGAGAGTGATCTCCATCATTGCTGTCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS GCA 90 bp | CCCAGCCACTCTGTAGATGCCGGCCACTGCTGCACTAGTAATCATTaGTCCAGTTACAGAAGCCAGAAACCCGATGCTGACAGCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSHSVDAGHCCTSNH*SSYRSQKPDADSND Trigger: ATCATTGCTGTCAGCATCGGGTTTCTGGCTTCTGTAACTGGAGCAATGATTACTAGTGCAGCAGTGGCCGGCATCTACAGAGTGGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS GCA 72 bp | AGCACCGTGCCATGGGCCCAGAGGCTCAGGACCTGCTaGACCGACAGGTTGATCATCGAGTGGTCGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: STVPWAQRLRTC*TDRLIIEWSAP Trigger: GGGCGCCGACCACTCGATGATCAACCTGTCGGTGCAGCAGGTCCTGAGCCTCTGGGCCCATGGCACGGTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
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| CDS GCA 72 bp | CTCAGCACCGTGCCATGGGCCCAGAGGCTCAGGACCTaGTGCACCGACAGGTTGATCATCGAGTGGTCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LSTVPWAQRLRT*CTDRLIIEWSA Trigger: CGCCGACCACTCGATGATCAACCTGTCGGTGCAGCAGGTCCTGAGCCTCTGGGCCCATGGCACGGTGCTGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129449.3 ENSMUST00000221694.2 |
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| CDS GCA 72 bp | CCTGTGCCTCTGCAGCATCACAAACATCAGCACGCCTaGAGCACCGTGGACAAACAGAGAGGAGAAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVPLQHHKHQHA*STVDKQRGEES Trigger: GCTCTCTTCTCCTCTCTGTTTGTCCACGGTGCTGCAGGCGTGCTGATGTTTGTGATGCTGCAGAGGCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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| CDS GCA 72 bp | TCTGTAGATGCCGGCCACTGCTGCACTAGTAATCATTaGTCCAGTTACAGAAGCCAGAAACCCGATGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVDAGHCCTSNH*SSYRSQKPDAD Trigger: GTCAGCATCGGGTTTCTGGCTTCTGTAACTGGAGCAATGATTACTAGTGCAGCAGTGGCCGGCATCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129449.3 |
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