Pregenerated sensors for TMEM170 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031953Ensembl transcript IDs: ENSMUST00000034431.3
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCACCAGGGCTTCACATTCCAGGAAAGAGTTCCTCAGGGAAGGTTaGCATGTCCCGGCTGTCACAATAACTTACAGGAAACCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GTRASHSRKEFLREG*HVPAVTITYRKPGQ Trigger: CTGCCCTGGTTTCCTGTAAGTTATTGTGACAGCCGGGACATGCCAACCTTCCCTGAGGAACTCTTTCCTGGAATGTGAAGCCCTGGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR CCA 90 bp | GGAGGGGTTCTATCTGAAGAGGAAGTGTTAGGCACTTTCTGGGAATaGATATGCAAATACTGCAAGAATGAGCGGGCTAAGGAGCCACTG | + |
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Preference number: 1 (lower is better) Translates to: GGVLSEEEVLGTFWE*ICKYCKNERAKEPL Trigger: CAGTGGCTCCTTAGCCCGCTCATTCTTGCAGTATTTGCATATCCATTCCCAGAAAGTGCCTAACACTTCCTCTTCAGATAGAACCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR CCA 90 bp | AAGGCCGGAGGGGTTCTATCTGAAGAGGAAGTGTTAGGCACTTTCTaGGAATGGATATGCAAATACTGCAAGAATGAGCGGGCTAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: KAGGVLSEEEVLGTF*EWICKYCKNERAKE Trigger: CTCCTTAGCCCGCTCATTCTTGCAGTATTTGCATATCCATTCCCAGAAAGTGCCTAACACTTCCTCTTCAGATAGAACCCCTCCGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR GCA 90 bp | TACATTTATCCACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTaGATGTGTTTAGTCTCAGCACTTGGGAGGCAGAGGCAGGTGGAT | + |
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Preference number: 1 (lower is better) Translates to: YIYPQKNTSHSSAWW*MCLVSALGRQRQVD Trigger: ATCCACCTGCCTCTGCCTCCCAAGTGCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGGATAAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR TCA 90 bp | ATCAGCTTTTGGTTGGAGGTTGCCTCTCTATCTCAGAACTTAGGATaGGAAGGGAGACTCAGATGCAGGAATCATGGTCCAAGAAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: ISFWLEVASLSQNLG*EGRLRCRNHGPRKS Trigger: GGACTTTCTTGGACCATGATTCCTGCATCTGAGTCTCCCTTCTCATCCTAAGTTCTGAGATAGAGAGGCAACCTCCAACCAAAAGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR CCA 90 bp | ATCTCAGAACTTAGGATGAGAAGGGAGACTCAGATGCAGGAATCATaGTCCAAGAAAGTCCTTACTGGGAGGAAATTCCTCAAGGTGATG | + |
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Preference number: 1 (lower is better) Translates to: ISELRMRRETQMQES*SKKVLTGRKFLKVM Trigger: CATCACCTTGAGGAATTTCCTCCCAGTAAGGACTTTCTTGGACCATGATTCCTGCATCTGAGTCTCCCTTCTCATCCTAAGTTCTGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR GCA 90 bp | CAAAATCCCACTAAGGCATCAAGAAATCAGCTTTTGGTTGGAGGTTaGCTCTCTATCTCAGAACTTAGGATGAGAAGGGAGACTCAGATG | + |
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Preference number: 1 (lower is better) Translates to: QNPTKASRNQLLVGG*LSISELRMRRETQM Trigger: CATCTGAGTCTCCCTTCTCATCCTAAGTTCTGAGATAGAGAGGCAACCTCCAACCAAAAGCTGATTTCTTGATGCCTTAGTGGGATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR CCA 90 bp | CAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCATTCAAATaGTTTCTTCCTGAAAACATTTCAAGCCACAGAGCTCAGTCTATA | + |
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Preference number: 1 (lower is better) Translates to: QQKQRPSGTHSLSFK*FLPENISSHRAQSI Trigger: TATAGACTGAGCTCTGTGGCTTGAAATGTTTTCAGGAAGAAACCATTTGAATGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR TCA 90 bp | TTTCTCCAGCTGAAGGATGTTTTCCAAATTCAAAGTCTCTCAGACTaGAAATGGAAATCTTTCCTTGGAAGAAAGATTTGCTCTTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: FLQLKDVFQIQSLSD*KWKSFLGRKICSFC Trigger: GCAAAAAGAGCAAATCTTTCTTCCAAGGAAAGATTTCCATTTTCAGTCTGAGAGACTTTGAATTTGGAAAACATCCTTCAGCTGGAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR TCA 90 bp | GCCGTTGAAACATACAGAAACAAAAACACCCGAACTTGTGTGTCTTaGTTAGAAACACAAATATTCATGGATGAATACGTTCACGAGTTA | + |
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Preference number: 1 (lower is better) Translates to: AVETYRNKNTRTCVS*LETQIFMDEYVHEL Trigger: TAACTCGTGAACGTATTCATCCATGAATATTTGTGTTTCTAATCAAGACACACAAGTTCGGGTGTTTTTGTTTCTGTATGTTTCAACGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR GCA 90 bp | CCACATCCTTCCAGTGATGCCATCCGCGCCCACAAGGCCCGGTACAATATTCCAAAGATTTGCTCTTTTTaGTGGGGGATAGGAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PHPSSDAIRAHKARYNIPKICSF*WGIGRA Trigger: GGCTCTTCCTATCCCCCAGCAAAAAGAGCAAATCTT...TGGAATATTGTACCGGGCCTTGTGGGCGCGGATGGCATCACTGGAAGGATGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | CCACATCCTTCCAGTGATGCCATCCGCGCCCACAAGGCCCGGTACAATATTCCAGGAAAGAAGAAACCATaGCACTGTCCATTCCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: PHPSSDAIRAHKARYNIPGKKKP*HCPFLL Trigger: CAAAAGGAATGGACAGTGTCATGGTTTCTTCTTTCC...TGGAATATTGTACCGGGCCTTGTGGGCGCGGATGGCATCACTGGAAGGATGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTTTGAGCCCAGGAGTTTaGACCAGCCTGGGCAACAAA | + |
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Preference number: 2 (lower is better) Translates to: AAKEVCSPEKHLAHKHYALSPGV*TSLGNK Trigger: TTTGTTGCCCAGGCTGGTCCAAACTCCTGGGCTCAA...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCAGCACCTTTCATGCTGAATaGTCTTGCCAGCCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TKEYFTQLGLVVHVFSLSTFHAE*SCQPLL Trigger: CAGGAGGGGCTGGCAAGATCATTCAGCATGAAAGGT...GCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR GCA 90 bp | CCACATCCTTCCAGTGATGCCATCCGCGCCCACAAGGCCCGGTACAATATTCCATATTTGCATTTTAGTTaGCCACCAAATCTGATCGTC | + |
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Preference number: 2 (lower is better) Translates to: PHPSSDAIRAHKARYNIPYLHFS*PPNLIV Trigger: GACGATCAGATTTGGTGGGCAACTAAAATGCAAATA...TGGAATATTGTACCGGGCCTTGTGGGCGCGGATGGCATCACTGGAAGGATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTCACCAGAAGCTACTTTaGAAACAGGTTACAACACGG | + |
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Preference number: 2 (lower is better) Translates to: AAKEVCSPEKHLAHKHYAHQKLL*KQVTTR Trigger: CCGTGTTGTAACCTGTTTTCAAAGTAGCTTCTGGTG...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTGCAATGATACATTCTTaGACAGGAAGGACGCAGACT | + |
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Preference number: 2 (lower is better) Translates to: AAKEVCSPEKHLAHKHYAAMIHS*TGRTQT Trigger: AGTCTGCGTCCTTCCTGTGCAAGAATGTATCATTGC...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCAAGAGAGACAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCACATTGCTGGCTTAGGTaGAAGTGTGCGCCTGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: EEQERQQKQRPSGTHSLSHCWLR*KCAPVK Trigger: TTTTACAGGCGCACACTTTCACCTAAGCCAGCAATG...TGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTGTCTCTCTTGCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCAGCACCCTAACAGGATCCTaGAAGCATCTTATCTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: TKEYFTQLGLVVHVFSLSTLTGS*KHLICA Trigger: GGCACAGATAAGATGCTTGCAGGATCCTGTTAGGGT...GCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGCAAGAGAGACAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCATTGGACAGGAAGTTATGTaGATATGGGTGCAAGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: RARETAETASKWNTLFIIGQEVM*IWVQVP Trigger: GGGCACTTGCACCCATATGCACATAACTTCCTGTCC...AATGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTGTCTCTCTTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | AAAAATAAGAAGGCCGGAGGGGTTCTATCTGAAGAGGAAGTGTTAGGCACTTTCAGGAAAGGGTTGTGGTaGTCTTCACACTCTCACACC | + |
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Preference number: 2 (lower is better) Translates to: KNKKAGGVLSEEEVLGTFRKGLW*SSHSHT Trigger: GGTGTGAGAGTGTGAAGACCACCACAACCCTTTCCT...GAAAGTGCCTAACACTTCCTCTTCAGATAGAACCCCTCCGGCCTTCTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTAGAGCCAATTATTTTTaGAGCCATCCCTGCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: AAKEVCSPEKHLAHKHYARANYF*SHPCSF Trigger: GAAACTGCAGGGATGGCTCCAAAAATAATTGGCTCT...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | CCACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCACCAAAGCTGTTGCTTTaGACGCTACTTCAGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: PQKNTSHSSAWWCMCLVSPKLLL*TLLQFF Trigger: GAAGAACTGAAGTAGCGTTCAAAGCAACAGCTTTGG...TGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTAGTTTTGACAAGTGGTaGTCAAAAGGAAAGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: AAKEVCSPEKHLAHKHYASFDKW*SKGKSQ Trigger: TTGGCTCTTTCCTTTTGACCACCACTTGTCAAAACT...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCTGCATTTCCTAAGTGAAATCTTGCTGCAAAGGAAGTGTGCAGCCCAGCAAGAAATCAGCTTTTaGTTGGAGGTTGCCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: HFLHFLSEILLQRKCAAQQEISF*LEVASL Trigger: TAGAGAGGCAACCTCCAACCAAAAGCTGATTTCTTG...CTGGGCTGCACACTTCCTTTGCAGCAAGATTTCACTTAGGAAATGCAGGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTTTCTGGGAATGGATATaGAAATACTGCAAGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: AAKEVCSPEKHLAHKHYAFWEWI*KYCKNE Trigger: CTCATTCTTGCAGTATTTGCATATCCATTCCCAGAA...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR GCA 90 bp | CTATGTACATTTATCCACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATTATGTGCATATGGGTaGAAGTGCCCACAGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LCTFIHKRILHTARLGGALCAYG*KCPQRV Trigger: GACTCTCTGTGGGCACTTGCACCCATATGCACATAA...TGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGGATAAATGTACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCAAAATCCCACTAAGGCATCAAGAAATCAGCTTTTGGTTGGAGGTTGCCTCATTTGCTCTTTTTGCTaGGGGATAGGAAGAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: PQNPTKASRNQLLVGGCLICSFC*GIGRAI Trigger: AATGGCTCTTCCTATCCCCCAGCAAAAAGAGCAAAT...GAGGCAACCTCCAACCAAAAGCTGATTTCTTGATGCCTTAGTGGGATTTTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCAGCACTGTCCATTCCTTTTaGGGAGAGTCTATAAAACTC | + |
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Preference number: 2 (lower is better) Translates to: TKEYFTQLGLVVHVFSLSTVHSF*GESIKL Trigger: GAGTTTTATAGACTCTCCTCAAAAGGAATGGACAGT...GCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAAGAGAGACAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCATTAGTCAGTCAAGCCACTaGAGAAAGTCTGTGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RARETAETASKWNTLFIISQSSH*RKSVCF Trigger: AAAACACACAGACTTTCTTCAGTGGCTTGACTGACT...AATGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTGTCTCTCTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCAGCCATTACTGGGCAAATTaGTCTGCTTGGCTGTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: TKEYFTQLGLVVHVFSLSHYWAN*SAWLFY Trigger: ATAAAACAGCCAAGCAGATCAATTTGCCCAGTAATG...GCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCAGCATGTCACATTCTCAGTaGTCACCTACTTTTGACAGT | + |
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Preference number: 2 (lower is better) Translates to: TKEYFTQLGLVVHVFSLSMSHSQ*SPTFDS Trigger: ACTGTCAAAAGTAGGTGACCACTGAGAATGTGACAT...GCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCAAAATCCCACTAAGGCATCAAGAAATCAGCTTTTGGTTGGAGGTTGCCTCGTCAGGGACATTCTTTaGGAAAAAGAACCTCGATTA | + |
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Preference number: 2 (lower is better) Translates to: PQNPTKASRNQLLVGGCLVRDIL*EKEPRL Trigger: TAATCGAGGTTCTTTTTCCCAAAGAATGTCCCTGAC...GAGGCAACCTCCAACCAAAAGCTGATTTCTTGATGCCTTAGTGGGATTTTGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | ACACAGGAACTTAATTTTAACCTCAAAATCCCACTAAGGCATCAAGAAATCAGCGTGGTCACCTACTTTTaGCAGTGGAACCAAAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: TQELNFNLKIPLRHQEISVVTYF*QWNQSC Trigger: ACAGCTTTGGTTCCACTGTCAAAAGTAGGTGACCAC...GCTGATTTCTTGATGCCTTAGTGGGATTTTGAGGTTAAAATTAAGTTCCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGCAAGAGAGACAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCAAGGATATCAATTCTCTaGAAGAAAAATAAGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: EEQERQQKQRPSGTHSLSRISIL*KKNKKA Trigger: GGCCTTCTTATTTTTCTTCCAGAGAATTGATATCCT...TGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTGTCTCTCTTGCTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CCA 90 bp | CTATGTACATTTATCCACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATACAGTTTTGACAAGTaGTGGTCAAAAGGAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LCTFIHKRILHTARLGGAYSFDK*WSKGKS Trigger: GCTCTTTCCTTTTGACCACCACTTGTCAAAACTGTA...TGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGGATAAATGTACATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR CAA 90 bp | ATAAAATGGATAGTGTTAAAGATGACAAGGTGTCAGGGACATTCTTaGGGAAAAAGAACCTCGATTAGGCACGATAGTGATGCCTATTGT | + |
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Preference number: 2 (lower is better) Translates to: IKWIVLKMTRCQGHS*GKRTSIRHDSDAYC Trigger: ACAATAGGCATCACTATCGTGCCTAATCGAGGTTCTTTTTCCCAAAGAATGTCCCTGACACCTTGTCATCTTTAACACTATCCATTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTTAGAGCCGTTGAAACATACAGAAACAAAAACACCCGAACTTGTGTGTCTTCAGCCTAATTGGTTTTaGAGTTCAAGTCAGTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: FLEPLKHTETKTPELVCLQPNWF*SSSQSS Trigger: GCTTGACTGACTTGAACTTCAAAACCAATTAGGCTG...AAGACACACAAGTTCGGGTGTTTTTGTTTCTGTATGTTTCAACGGCTCTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR TCA 72 bp | CTTAAGTTGCCTCAAGAGAGGAAATGCCAAGGAGGATaGCGGGCGTCCACAGGGTCTTCAATTTCTGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: LKLPQERKCQGG*RASTGSSISGA Trigger: AGCTCCAGAAATTGAAGACCCTGTGGACGCCCGTCATCCTCCTTGGCATTTCCTCTCTTGAGGCAACTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR GCA 72 bp | CCACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTaGATGTGTTTAGTCTCAGCACTTGGGAGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: PQKNTSHSSAWW*MCLVSALGRQR Trigger: CCTCTGCCTCCCAAGTGCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CAA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTGGCAATGATACATTCTaGCACAGGAAGGACGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: AAKEVCSPEKHLAHKHYAGNDTF*HRKDAD Trigger: GTCTGCGTCCTTCCTGTGCAAGAATGTATCATTGCC...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR TCA 72 bp | GGAAGGACGCAGACTCCAAGGCATTGCTGGCTTAGGTaGAAGTGTGCGCCTGTAAAACTTAAGTTGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: GRTQTPRHCWLR*KCAPVKLKLPQ Trigger: TTGAGGCAACTTAAGTTTTACAGGCGCACACTTTCACCTAAGCCAGCAATGCCTTGGAGTCTGCGTCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR GCA 72 bp | AACCTAAAGGACGCAGGAAGGATGGACACTATTACTTaGATGAACTGCTGGCTCGCCACTTCCTGCATTTCC | + |
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Preference number: 3 (lower is better) Translates to: NLKDAGRMDTIT*MNCWLATSCIS Trigger: GGAAATGCAGGAAGTGGCGAGCCAGCAGTTCATGCAAGTAATAGTGTCCATCCTTCCTGCGTCCTTTAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR CCA 72 bp | CTACCTTTCATGCTGAATGATCTTGCCAGCCCCTCCTaGCTACTATTTAACCAGAAGCGGAGCGCATATTGC | + |
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Preference number: 3 (lower is better) Translates to: LPFMLNDLASPS*LLFNQKRSAYC Trigger: GCAATATGCGCTCCGCTTCTGGTTAAATAGTAGCCAGGAGGGGCTGGCAAGATCATTCAGCATGAAAGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR TCA 72 bp | TGGTTGGAGGTTGCCTCTCTATCTCAGAACTTAGGATaGGAAGGGAGACTCAGATGCAGGAATCATGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: WLEVASLSQNLG*EGRLRCRNHGP Trigger: TGGACCATGATTCCTGCATCTGAGTCTCCCTTCTCATCCTAAGTTCTGAGATAGAGAGGCAACCTCCAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR GCA 72 bp | GTGTTAGGCACTTTCTGGGAATGGATATGCAAATACTaGAAGAATGAGCGGGCTAAGGAGCCACTGCTAGGT | + |
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Preference number: 3 (lower is better) Translates to: VLGTFWEWICKY*KNERAKEPLLG Trigger: ACCTAGCAGTGGCTCCTTAGCCCGCTCATTCTTGCAGTATTTGCATATCCATTCCCAGAAAGTGCCTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR CCA 72 bp | TATCCACAAAAGAATACTTCACACAGCTCGGCTTGGTaGTGCATGTGTTTAGTCTCAGCACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: YPQKNTSHSSAW*CMCLVSALGRQ Trigger: CTGCCTCCCAAGTGCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| 3UTR-3UTR CAA 90 bp | CACTTCCTGCATTTCCTAAGTGAAATCTTGCTGCAAAGGAAGTGTGCAGCCCAGCCTTGGAAGAAAGATTaGCTCTTTTTGCTGGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HFLHFLSEILLQRKCAAQPWKKD*LFLLGD Trigger: ATCCCCCAGCAAAAAGAGCAAATCTTTCTTCCAAGG...CTGGGCTGCACACTTCCTTTGCAGCAAGATTTCACTTAGGAAATGCAGGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR GCA 72 bp | TCAACGGAACCAGCAAGAAAAACCCTAACAGGATCCTaGAAGCATCTTATCTGTGCCCGAATGTCCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: STEPARKTLTGS*KHLICARMSKE Trigger: CTCTTTGGACATTCGGGCACAGATAAGATGCTTGCAGGATCCTGTTAGGGTTTTTCTTGCTGGTTCCGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CCA 72 bp | CTTAGGATGAGAAGGGAGACTCAGATGCAGGAATCATaGTCCAAGAAAGTCCTTACTGGGAGGAAATTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRMRRETQMQES*SKKVLTGRKFL Trigger: GAGGAATTTCCTCCCAGTAAGGACTTTCTTGGACCATGATTCCTGCATCTGAGTCTCCCTTCTCATCCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCAAGAGAGACAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCATTACATTCCAGCAGTTaGTTCTCAACCAACCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: EEQERQQKQRPSGTHSLSLHSSS*FSTNPS Trigger: GCTTGGGTTGGTTGAGAACAAACTGCTGGAATGTAA...TGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTGTCTCTCTTGCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTTTCCAAAGGTACAGTTaGGAGGCCTTTTTAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AAKEVCSPEKHLAHKHYAFQRYS*EAFLRK Trigger: TTTCCTTAAAAAGGCCTCCAAACTGTACCTTTGGAA...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCAAAAGATTTGCTCTTTTaGCTGGGGGATAGGAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PQKNTSHSSAWWCMCLVSKDLLF*LGDRKS Trigger: GCTCTTCCTATCCCCCAGCAAAAAGAGCAAATCTTT...TGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR GCA 72 bp | TTAAAATCATGTGTACGTGGAGGACAGGAAGTTATGTaGATATGGGTGCAAGTGCCCACAGAGAGTCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKSCVRGGQEVM*IWVQVPTESLG Trigger: TCCAAGACTCTCTGTGGGCACTTGCACCCATATGCACATAACTTCCTGTCCTCCACGTACACATGATTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CCA 72 bp | GGGGTTCTATCTGAAGAGGAAGTGTTAGGCACTTTCTaGGAATGGATATGCAAATACTGCAAGAATGAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: GVLSEEEVLGTF*EWICKYCKNER Trigger: CCGCTCATTCTTGCAGTATTTGCATATCCATTCCCAGAAAGTGCCTAACACTTCCTCTTCAGATAGAACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CCA 72 bp | TCATGTGTACGTGGAGGACAGGAAGTTATGTGCATATaGGTGCAAGTGCCCACAGAGAGTCTTGGATATTTA | + |
|
Preference number: 3 (lower is better) Translates to: SCVRGGQEVMCI*VQVPTESLGYL Trigger: TAAATATCCAAGACTCTCTGTGGGCACTTGCACCCATATGCACATAACTTCCTGTCCTCCACGTACACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CCA 72 bp | ATTTATCCACAAAAGAATACTTCACACAGCTCGGCTTaGTGGTGCATGTGTTTAGTCTCAGCACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IYPQKNTSHSSA*WCMCLVSALGR Trigger: CCTCCCAAGTGCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGGATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CCA 72 bp | AAGAAAGAAATACAAGTTCACAAAACCTTCTGCGCGTaGACCATTAATGGCACCAGGGCTTCACATTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KKEIQVHKTFCA*TINGTRASHSR Trigger: CCTGGAATGTGAAGCCCTGGTGCCATTAATGGTCCACGCGCAGAAGGTTTTGTGAACTTGTATTTCTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATGTGTTTAGTCTCAGCGGAAGAGCCATTTATTaGCATTTTAGTTGCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TKEYFTQLGLVVHVFSLSGRAIY*HFSCPP Trigger: TGGTGGGCAACTAAAATGCAAATAAATGGCTCTTCC...GCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR TCA 72 bp | GAGGAAAGAAGAAACCATGACACTGTCCATTCCTTTTaGGGAGAGTCTATAAAACTCAGGGACGCCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: EERRNHDTVHSF*GESIKLRDAIT Trigger: TGTGATGGCGTCCCTGAGTTTTATAGACTCTCCTCAAAAGGAATGGACAGTGTCATGGTTTCTTCTTTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR TCA 72 bp | CCACAAGGCCCGGTACAATATTCCAGTTTCTCCAGCTaGAGGATGTTTTCCAAATTCAAAGTCTCTCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: PQGPVQYSSFSS*RMFSKFKVSQT Trigger: AGTCTGAGAGACTTTGAATTTGGAAAACATCCTTCAGCTGGAGAAACTGGAATATTGTACCGGGCCTTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR GCA 72 bp | ACTAAGGCATCAAGAAATCAGCTTTTGGTTGGAGGTTaGCTCTCTATCTCAGAACTTAGGATGAGAAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TKASRNQLLVGG*LSISELRMRRE Trigger: CTCCCTTCTCATCCTAAGTTCTGAGATAGAGAGGCAACCTCCAACCAAAAGCTGATTTCTTGATGCCTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR GCA 72 bp | GTACACAAGAAAGAAATACAAGTTCACAAAACCTTCTaGGCGTGGACCATTAATGGCACCAGGGCTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: VHKKEIQVHKTF*AWTINGTRASH Trigger: ATGTGAAGCCCTGGTGCCATTAATGGTCCACGCGCAGAAGGTTTTGTGAACTTGTATTTCTTTCTTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CCA 72 bp | CTATCTGAAGAGGAAGTGTTAGGCACTTTCTGGGAATaGATATGCAAATACTGCAAGAATGAGCGGGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSEEEVLGTFWE*ICKYCKNERAK Trigger: CTTAGCCCGCTCATTCTTGCAGTATTTGCATATCCATTCCCAGAAAGTGCCTAACACTTCCTCTTCAGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR TCA 72 bp | CACCTACTTTTGACAGTGGAACCAAAGCTGTTGCTTTaGACGCTACTTCAGTTCTTCTTCCTGTTACATTCC | + |
|
Preference number: 3 (lower is better) Translates to: HLLLTVEPKLLL*TLLQFFFLLHS Trigger: GGAATGTAACAGGAAGAAGAACTGAAGTAGCGTTCAAAGCAACAGCTTTGGTTCCACTGTCAAAAGTAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR GCA 72 bp | TGTTTAGGGGAACAGCCAACCACCTATTCACCTATGTaGTTAGTGTGTAAAATTACATCCCACATCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLGEQPTTYSPM*LVCKITSHILP Trigger: TGGAAGGATGTGGGATGTAATTTTACACACTAAGCACATAGGTGAATAGGTGGTTGGCTGTTCCCCTAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGTTGCCCACCAAATCTGATCGTCACTACAGTTTTGACAAGTGGTGGTCAATCTAGCTGGTTCCATTaGAGGAAAGAAGAAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: FSCPPNLIVTTVLTSGGQSSWFH*RKEETM Trigger: CATGGTTTCTTCTTTCCTCAAATGGAACCAGCTAGA...TTGACCACCACTTGTCAAAACTGTAGTGACGATCAGATTTGGTGGGCAACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTAGTTGCCCACCAAATCTGATCGTCACTACAGTTTTGACAAGTGGTGGTCAAACCAAAGCTGTTGCTTaGAACGCTACTTCAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FSCPPNLIVTTVLTSGGQTKAVA*NATSVL Trigger: AAGAACTGAAGTAGCGTTCAAAGCAACAGCTTTGGT...TTGACCACCACTTGTCAAAACTGTAGTGACGATCAGATTTGGTGGGCAACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR TCA 72 bp | CCAAGAAAGTCCTTACTGGGAGGAAATTCCTCAAGGTaGTGTGTTCAAAATAAACTGTGGCAAACAACTCGA | + |
|
Preference number: 3 (lower is better) Translates to: PRKSLLGGNSSR*CVQNKLWQTTR Trigger: TCGAGTTGTTTGCCACAGTTTATTTTGAACACATCACCTTGAGGAATTTCCTCCCAGTAAGGACTTTCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CCA 72 bp | GTCAAGATAGTTATCCATAACATGTCACATTCTCAGTaGTCACCTACTTTTGACAGTGGAACCAAAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VKIVIHNMSHSQ*SPTFDSGTKAV Trigger: AACAGCTTTGGTTCCACTGTCAAAAGTAGGTGACCACTGAGAATGTGACATGTTATGGATAACTATCTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTAGAGCCGTTGAAACATACAGAAACAAAAACACCCGAACTTGTGTGTCTTCCATTACTGGGCAAATaGATCTGCTTGGCTGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FLEPLKHTETKTPELVCLPLLGK*ICLAVL Trigger: TAAAACAGCCAAGCAGATCAATTTGCCCAGTAATGG...AAGACACACAAGTTCGGGTGTTTTTGTTTCTGTATGTTTCAACGGCTCTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTAGAGCCGTTGAAACATACAGAAACAAAAACACCCGAACTTGTGTGTCTTCACTGTCCATTCCTTTaGAGGAGAGTCTATAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: FLEPLKHTETKTPELVCLHCPFL*RRVYKT Trigger: AGTTTTATAGACTCTCCTCAAAAGGAATGGACAGTG...AAGACACACAAGTTCGGGTGTTTTTGTTTCTGTATGTTTCAACGGCTCTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR TCA 90 bp | CACTTCCTGCATTTCCTAAGTGAAATCTTGCTGCAAAGGAAGTGTGCAGCCCAGGCACGAGCTTCAGGCTaGGGATCTGCTGCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLHFLSEILLQRKCAAQARASG*GSAAGA Trigger: GGCTCCTGCAGCAGATCCTCAGCCTGAAGCTCGTGC...CTGGGCTGCACACTTCCTTTGCAGCAAGATTTCACTTAGGAAATGCAGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTTGCTCATAAGCATTACGCTGATCATTTCCTTCCCTaGCGCTCGGTAGACGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAKEVCSPEKHLAHKHYADHFLP*RSVDAS Trigger: GCTGGCGTCTACCGAGCGGCAGGGAAGGAAATGATC...AGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR CCA 90 bp | CACTTCCTGCATTTCCTAAGTGAAATCTTGCTGCAAAGGAAGTGTGCAGCCCAGAGGAGCAGAGCGAAGTaGAGTTGGGGCACAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLHFLSEILLQRKCAAQRSRAK*SWGTGS Trigger: GGACCCTGTGCCCCAACTCCACTTCGCTCTGCTCCT...CTGGGCTGCACACTTCCTTTGCAGCAAGATTTCACTTAGGAAATGCAGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | ATTCCAGCAGTTTGTTCTCAACCAACCCAAGCCAGCTaGGCTAAGCTCTCAGTAGAGTGTAGCCTGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IPAVCSQPTQAS*AKLSVECSLPP Trigger: AGGGGGCAGGCTACACTCTACTGAGAGCTTAGCCAAGCTGGCTTGGGTTGGTTGAGAACAAACTGCTGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR CCA 90 bp | CCACATCCTTCCAGTGATGCCATCCGCGCCCACAAGGCCCGGTACAATATTCCAAACCTACCATATTTGTaGTGTCTGAGGGTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHPSSDAIRAHKARYNIPNLPYL*CLRVKR Trigger: CCTCTTCACCCTCAGACACCACAAATATGGTAGGTT...TGGAATATTGTACCGGGCCTTGTGGGCGCGGATGGCATCACTGGAAGGATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR GCA 90 bp | AAGATAGTTATCCATAACATGTCACATTCTCAGTGGTCACCTACTTTTGACAGTGGCACAGGGTCCCGTTaGCCACCCGCGGCACGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KIVIHNMSHSQWSPTFDSGTGSR*PPAARA Trigger: AGCTCGTGCCGCGGGTGGGCAACGGGACCCTGTGCC...ACTGTCAAAAGTAGGTGACCACTGAGAATGTGACATGTTATGGATAACTATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR GCA 90 bp | AAGTCAGTCAAGCCACTGAAGAAAGTCTGTGTGTTTTCAGAGACGGTAAATAAAAGGCTGAGGATCTGCTaGAGGAGCCCGGCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSVKPLKKVCVFSETVNKRLRIC*RSPAEP Trigger: CGGCTCAGCCGGGCTCCTGCAGCAGATCCTCAGCCT...TTTATTTACCGTCTCTGAAAACACACAGACTTTCTTCAGTGGCTTGACTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR GCA 90 bp | CTATGTACATTTATCCACAAAAGAATACTTCACACAGCTCGGCTTGGTGGTGCATTCAGGCTGAGGATCTaGTGCAGGAGCCCGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCTFIHKRILHTARLGGAFRLRI*CRSPAE Trigger: CTCAGCCGGGCTCCTGCAGCAGATCCTCAGCCTGAA...TGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGGATAAATGTACATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | TCTCCACTGTTGCTAGGAAACGGCAATGATACATTCTaGCACAGGAAGGACGCAGACTCCAAGGCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLLLGNGNDTF*HRKDADSKALL Trigger: CAGCAATGCCTTGGAGTCTGCGTCCTTCCTGTGCAAGAATGTATCATTGCCGTTTCCTAGCAACAGTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | GCCTGCCCCCTTGAAATCAAGCAGCAATCTCCACTGTaGCTAGGAAACGGCAATGATACATTCTTGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACPLEIKQQSPL*LGNGNDTFLHR Trigger: CCTGTGCAAGAATGTATCATTGCCGTTTCCTAGCAACAGTGGAGATTGCTGCTTGATTTCAAGGGGGCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | AAACCTAAAGGACGCAGGAAGGATGGACACTATTACTaGCATGAACTGCTGGCTCGCCACTTCCTGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPKGRRKDGHYY*HELLARHFLHF Trigger: GAAATGCAGGAAGTGGCGAGCCAGCAGTTCATGCAAGTAATAGTGTCCATCCTTCCTGCGTCCTTTAGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR CCA 90 bp | ACACAGGAACTTAATTTTAACCTCAAAATCCCACTAAGGCATCAAGAAATCAGCAGAGCGAAGTGGAGTTaGGGCACAGGGTCCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQELNFNLKIPLRHQEISRAKWS*GTGSRC Trigger: GCAACGGGACCCTGTGCCCCAACTCCACTTCGCTCT...GCTGATTTCTTGATGCCTTAGTGGGATTTTGAGGTTAAAATTAAGTTCCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR CCA 90 bp | GAAGAGCAAGAGAGACAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCAGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEQERQQKQRPSGTHSLSDSSSN*SHDAHQ Trigger: TTGATGGGCATCGTGGGACCAATTACTGCTGGAATC...TGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTGTCTCTCTTGCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | GGTCTTCACACTCTCACACCTTCTAGCTGGTTCCATTaGAGGAAAGAAGAAACCATGACACTGTCCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLHTLTPSSWFH*RKEETMTLSIP Trigger: AGGAATGGACAGTGTCATGGTTTCTTCTTTCCTCAAATGGAACCAGCTAGAAGGTGTGAGAGTGTGAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | CATTTATCCACAAAAGAATACTTCACACAGCTCGGCTaGGTGGTGCATGTGTTTAGTCTCAGCACTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLSTKEYFTQLG*VVHVFSLSTWE Trigger: CTCCCAAGTGCTGAGACTAAACACATGCACCACCAAGCCGAGCTGTGTGAAGTATTCTTTTGTGGATAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | TTGCTGCAAAGGAAGTGTGCAGCCCAGAGAAGCATCTaGCTCATAAGCATTACGCTTTTACACAGGAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLQRKCAAQRSI*LISITLLHRNL Trigger: TAAGTTCCTGTGTAAAAGCGTAATGCTTATGAGCAAGATGCTTCTCTGGGCTGCACACTTCCTTTGCAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR TCA 90 bp | AAGATAGTTATCCATAACATGTCACATTCTCAGTGGTCACCTACTTTTGACAGTAGTCCGGCAGGGACATaGAAGAACACAGAGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: KIVIHNMSHSQWSPTFDSSPAGT*KNTEDI Trigger: GATGTCCTCTGTGTTCTTTCATGTCCCTGCCGGACT...ACTGTCAAAAGTAGGTGACCACTGAGAATGTGACATGTTATGGATAACTATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR GCA 90 bp | AAGATAGTTATCCATAACATGTCACATTCTCAGTGGTCACCTACTTTTGACAGTCACAGAGGACATCAGTaGCCACAGGAACACACCATA | + |
|
Preference number: 4 (lower is better) Translates to: KIVIHNMSHSQWSPTFDSHRGHQ*PQEHTI Trigger: TATGGTGTGTTCCTGTGGGCACTGATGTCCTCTGTG...ACTGTCAAAAGTAGGTGACCACTGAGAATGTGACATGTTATGGATAACTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR CCA 90 bp | AAATGGATAGTGTTAAAGATGACAAGGTGTCAGGGACATTCTTTGGGAAAAAGAACCATACCACATCTCTaGGAAGGAGCAGAGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWIVLKMTRCQGHSLGKRTIPHL*EGAERS Trigger: ACTTCGCTCTGCTCCTTCCCAGAGATGTGGTATGGT...TCTTTTTCCCAAAGAATGTCCCTGACACCTTGTCATCTTTAACACTATCCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | TTTAGTTGCCCACCAAATCTGATCGTCACTACAGTTTaGACAAGTGGTGGTCAAAAGGAAAGAGCCAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSCPPNLIVTTV*TSGGQKERANY Trigger: ATAATTGGCTCTTTCCTTTTGACCACCACTTGTCAAAACTGTAGTGACGATCAGATTTGGTGGGCAACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR TCA 90 bp | TTTTTAGAGCCGTTGAAACATACAGAAACAAAAACACCCGAACTTGTGTGTCTTGGATGCTTACAGACATaGACCTACCATATTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLEPLKHTETKTPELVCLGCLQT*TYHICG Trigger: ACCACAAATATGGTAGGTTCATGTCTGTAAGCATCC...AAGACACACAAGTTCGGGTGTTTTTGTTTCTGTATGTTTCAACGGCTCTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| 3UTR CAA 72 bp | ATGGAAATCTTTCCTTGGAAGAAAGATTTGCTCTTTTaGCTGGGGGATAGGAAGAGCCATTTATTTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MEIFPWKKDLLF*LGDRKSHLFAF Trigger: AAATGCAAATAAATGGCTCTTCCTATCCCCCAGCAAAAAGAGCAAATCTTTCTTCCAAGGAAAGATTTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS CCA 90 bp | ACACACCATACCACATCTCTGGGAAGGAGCAGAGCGAAGTGGAGTTaGGGCACAGGGTCCCGTTGCCCACCCGCGGCACGAGCTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: THHTTSLGRSRAKWS*GTGSRCPPAARASG Trigger: GCCTGAAGCTCGTGCCGCGGGTGGGCAACGGGACCCTGTGCCCCAACTCCACTTCGCTCTGCTCCTTCCCAGAGATGTGGTATGGTGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
||
| CDS-3UTR CAA 90 bp | GGACAGGAAGTTATGTGCATATGGGTGCAAGTGCCCACAGAGAGTCTTGGATATGGGCACAGGGTCCCGTaGCCCACCCGCGGCACGAGC | + |
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Preference number: 5 (lower is better) Translates to: GQEVMCIWVQVPTESLGYGHRVP*PTRGTS Trigger: GCTCGTGCCGCGGGTGGGCAACGGGACCCTGTGCCC...ATATCCAAGACTCTCTGTGGGCACTTGCACCCATATGCACATAACTTCCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS GCA 90 bp | CCCGGTGCCCAGGGTGAGGGCTTCAAAGGGGATCATTTCCTTCCCTaGCGCTCGGTAGACGCCAGCAATTGCTGCACTTGTCAAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: PGAQGEGFKGDHFLP*RSVDASNCCTCQDS Trigger: GGAATCTTGACAAGTGCAGCAATTGCTGGCGTCTACCGAGCGGCAGGGAAGGAAATGATCCCCTTTGAAGCCCTCACCCTGGGCACCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS TCA 90 bp | TTGTGGTGTCTGAGGGTGAAGAGGGCCAGCAGTCCGGCAGGGACATaGAAGAACACAGAGGACATCAGTGCCCACAGGAACACACCATAC | + |
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Preference number: 5 (lower is better) Translates to: LWCLRVKRASSPAGT*KNTEDISAHRNTPY Trigger: GTATGGTGTGTTCCTGTGGGCACTGATGTCCTCTGTGTTCTTTCATGTCCCTGCCGGACTGCTGGCCCTCTTCACCCTCAGACACCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGAGAGACAGCAGAAACAGCGTCCAAGTGGAACACACTCTTTATCATTCAGAGCGAAGTGGAGTaGGGGCACAGGGTCCCGTTG | + |
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Preference number: 5 (lower is better) Translates to: RARETAETASKWNTLFIIQSEVE*GHRVPL Trigger: CAACGGGACCCTGTGCCCCAACTCCACTTCGCTCTG...AATGATAAAGAGTGTGTTCCACTTGGACGCTGTTTCTGCTGTCTCTCTTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS CCA 90 bp | GTAGACGCCAGCAATTGCTGCACTTGTCAAGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAACAGGATGCTTACAGACATGAACCT | + |
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Preference number: 5 (lower is better) Translates to: VDASNCCTCQDSSSN*SHDAHQQDAYRHEP Trigger: AGGTTCATGTCTGTAAGCATCCTGTTGATGGGCATCGTGGGACCAATTACTGCTGGAATCTTGACAAGTGCAGCAATTGCTGGCGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS-3UTR CAA 90 bp | AAGATAGTTATCCATAACATGTCACATTCTCAGTGGTCACCTACTTTTGACAGTGGTAGACGCCAGCAATaGCTGCACTTGTCAAGATTC | + |
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Preference number: 5 (lower is better) Translates to: KIVIHNMSHSQWSPTFDSGRRQQ*LHLSRF Trigger: GAATCTTGACAAGTGCAGCAATTGCTGGCGTCTACC...ACTGTCAAAAGTAGGTGACCACTGAGAATGTGACATGTTATGGATAACTATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS-3UTR CAA 90 bp | TTTTTAGAGCCGTTGAAACATACAGAAACAAAAACACCCGAACTTGTGTGTCTTATGAACCTACCATATTaGTGGTGTCTGAGGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: FLEPLKHTETKTPELVCLMNLPY*WCLRVK Trigger: CTTCACCCTCAGACACCACAAATATGGTAGGTTCAT...AAGACACACAAGTTCGGGTGTTTTTGTTTCTGTATGTTTCAACGGCTCTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS TCA 72 bp | GGGTCCCGTTGCCCACCCGCGGCACGAGCTTCAGGCTaGGGATCTGCTGCAGGAGCCCGGCTGAGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GSRCPPAARASG*GSAAGARLSRR Trigger: GCGGCGGCTCAGCCGGGCTCCTGCAGCAGATCCTCAGCCTGAAGCTCGTGCCGCGGGTGGGCAACGGGACCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS CAA 72 bp | GAGCAGAGCGAAGTGGAGTTGGGGCACAGGGTCCCGTaGCCCACCCGCGGCACGAGCTTCAGGCTGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: EQSEVELGHRVP*PTRGTSFRLRI Trigger: GATCCTCAGCCTGAAGCTCGTGCCGCGGGTGGGCAACGGGACCCTGTGCCCCAACTCCACTTCGCTCTGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS CCA 72 bp | CACCATACCACATCTCTGGGAAGGAGCAGAGCGAAGTaGAGTTGGGGCACAGGGTCCCGTTGCCCACCCGCG | + |
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Preference number: 6 (lower is better) Translates to: HHTTSLGRSRAK*SWGTGSRCPPA Trigger: CGCGGGTGGGCAACGGGACCCTGTGCCCCAACTCCACTTCGCTCTGCTCCTTCCCAGAGATGTGGTATGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS CAA 90 bp | AACACACCATACCACATCTCTGGGAAGGAGCAGAGCGAAGTGGAGTaGGGGCACAGGGTCCCGTTGCCCACCCGCGGCACGAGCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: NTPYHISGKEQSEVE*GHRVPLPTRGTSFR Trigger: CCTGAAGCTCGTGCCGCGGGTGGGCAACGGGACCCTGTGCCCCAACTCCACTTCGCTCTGCTCCTTCCCAGAGATGTGGTATGGTGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS GCA 72 bp | CAGGGTGAGGGCTTCAAAGGGGATCATTTCCTTCCCTaGCGCTCGGTAGACGCCAGCAATTGCTGCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: QGEGFKGDHFLP*RSVDASNCCTC Trigger: ACAAGTGCAGCAATTGCTGGCGTCTACCGAGCGGCAGGGAAGGAAATGATCCCCTTTGAAGCCCTCACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS CAA 90 bp | ACGATGCCCATCAACAGGATGCTTACAGACATGAACCTACCATATTaGTGGTGTCTGAGGGTGAAGAGGGCCAGCAGTCCGGCAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: TMPINRMLTDMNLPY*WCLRVKRASSPAGT Trigger: TGTCCCTGCCGGACTGCTGGCCCTCTTCACCCTCAGACACCACAAATATGGTAGGTTCATGTCTGTAAGCATCCTGTTGATGGGCATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS CAA 72 bp | ATCAACAGGATGCTTACAGACATGAACCTACCATATTaGTGGTGTCTGAGGGTGAAGAGGGCCAGCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: INRMLTDMNLPY*WCLRVKRASSP Trigger: CGGACTGCTGGCCCTCTTCACCCTCAGACACCACAAATATGGTAGGTTCATGTCTGTAAGCATCCTGTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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| CDS CCA 72 bp | AGCAATTGCTGCACTTGTCAAGATTCCAGCAGTAATTaGTCCCACGATGCCCATCAACAGGATGCTTACAGA | + |
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Preference number: 6 (lower is better) Translates to: SNCCTCQDSSSN*SHDAHQQDAYR Trigger: TCTGTAAGCATCCTGTTGATGGGCATCGTGGGACCAATTACTGCTGGAATCTTGACAAGTGCAGCAATTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034431.3 |
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